Martin Laviale

100

Documents

Publications

	Development of a collaborative web platform documenting the diversity and extent of diatom deformities Iane Vallanzasca , Sébastien Boutry , Martin Laviale , Eric Quinton , Soizic Morin Botany Letters, 2024, 171 (1), pp.50-53. ⟨10.1080/23818107.2023.2183898⟩ Journal articles hal-04019816v1
	Concurrent bioimaging of microalgal photophysiology and oxidative stress João Ezequiel , Matthew Nitschke , Martin Laviale , João Serôdio , Jörg Frommlet Photosynthesis Research, 2023, ⟨10.1007/s11120-022-00989-6⟩ Journal articles hal-03879842v1
	Usefulness of synthetic datasets for diatom automatic detection using a deep-learning approach Aishwarya Venkataramanan , Pierre Faure-Giovagnoli , Cyril Regan , David Heudre , Cécile Figus Engineering Applications of Artificial Intelligence, 2023, 117, pp.105594. ⟨10.1016/j.engappai.2022.105594⟩ Journal articles hal-03852321v1
	Disentangling the effects of microalgal diversity and thermal history on freshwater phototrophic biofilms facing heat stress: A thermal dose approach Camille Courcoul , Martin Laviale , Vincent Baillard , Elise Billoir , Joséphine Leflaive Journal of Ecology, 2023, ⟨10.1111/1365-2745.14058⟩ Journal articles hal-03895245v1
	Multiple-stressor exposure of aquatic food webs: Nitrate and warming modulate the effect of pesticides Vinita Vijayaraj , Martin Laviale , Joey Allen , Nellya Amoussou , Sabine Hilt Water Research, 2022, 216, pp.118325. ⟨10.1016/j.watres.2022.118325⟩ Journal articles hal-03718545v1
	Evaluating Multiple Stressor Effects on Benthic–Pelagic Freshwater Communities in Systems of Different Complexities: Challenges in Upscaling Vinita Vijayaraj , Nora Kipferler , Herwig Stibor , Joey Allen , Franz Hölker Water, 2022, 14 (4), pp.581. ⟨10.3390/w14040581⟩ Journal articles hal-03718544v1
	Machine learning techniques to characterize functional traits of plankton from image data Eric C. Orenstein , Sakina-Dorothée Ayata , Frédéric Maps , Érica C. Becker , Fabio Benedetti Limnology and Oceanography, 2022, 67 (8), pp.1647-1669. ⟨10.1002/lno.12101⟩ Journal articles hal-03482282v2
	Microalgal food sources greatly improve macroinvertebrate growth in detritus‐based headwater streams: Evidence from an instream experiment Tiphaine Labed-Veydert , Michael Danger , Vincent Felten , Alexandre Bec , Martin Laviale Freshwater Biology, 2022, 67 (8), pp.1380-1394. ⟨10.1111/fwb.13924⟩ Journal articles hal-03717000v1
	A glance at the French-speaking diatomist community (ADLaF 2019 meeting) Martin Laviale , Camille Noûs Botany Letters, 2021, 168 (1), pp.3-5. ⟨10.1080/23818107.2020.1779811⟩ Journal articles hal-02877132v1
	Functional trait-based approaches as a common framework for aquatic ecologists Severine Martini , Floriane Larras , Aurélien Boyé , Emile Faure , Nicole Aberle Limnology and Oceanography, 2021, 66 (3), pp.965-994. ⟨10.1002/lno.11655⟩ Journal articles hal-02996072v1
	Disentangling the direct and indirect effects of agricultural runoff on freshwater ecosystems subject to global warming: A microcosm study Joey Allen , Elisabeth M. Gross , Camille Courcoul , Stéphanie Boulêtreau , Arthur Compin Water Research, 2021, 190, pp.116713. ⟨10.1016/j.watres.2020.116713⟩ Journal articles hal-03031007v1
	Do leaf‐litter decomposers control biofilm primary production and benthic algal community structure in forest streams? Insights from an outdoor mesocosm experiment Joey Allen , Martin Laviale , Maria Cellamare , Quentin Bachelet , Vincent Felten Freshwater Biology, 2020, ⟨10.1111/fwb.13475⟩ Journal articles hal-02526187v1
	Temperature and nutrient effects on the relative importance of brown and green pathways for stream ecosystem functioning: A mesocosm approach Alice Gossiaux , Marc Rollin , Francois Guerold , Vincent Felten , Martin Laviale Freshwater Biology, 2020, 65 (7), pp.1239-1255. ⟨10.1111/fwb.13474⟩ Journal articles hal-02526210v1
	Probing the Adhesion of the Common Freshwater Diatom Nitzschia palea at the Nanoscale Martin Laviale , Audrey Beaussart , Joey Allen , Fabienne Quilès , Sofiane El-Kirat-Chatel ACS Applied Materials & Interfaces, 2019, 11 (51), pp.48574-48582. ⟨10.1021/acsami.9b17821⟩ Journal articles hal-02396296v1
	Modeling the impact of high temperatures on microalgal viability and photosynthetic activity Quentin Béchet , Martin Laviale , Nicolas Arsapin , Hubert Bonnefond , Olivier Bernard Biotechnology for Biofuels, 2017, 10 (1), pp.136. ⟨10.1186/s13068-017-0823-z⟩ Journal articles hal-01530933v1
	The importance of being fast: comparative kinetics of vertical migration and non-photochemical quenching of benthic diatoms under light stress Martin Laviale , Silja Frankenbach , João Serôdio Marine Biology, 2016, 163 (1), ⟨10.1007/s00227-015-2793-7⟩ Journal articles hal-03502980v1
	Herbicide toxicity on river biofilms assessed by pulse amplitude modulated (PAM) fluorometry S. Kim Tiam , M. Laviale , A. Feurtet Mazel , G. Jan , P. Gonzalez Aquatic Toxicology, 2015, 165, pp.160-171. ⟨10.1016/j.aquatox.2015.05.001⟩ Journal articles hal-02601382v1
	Response of intertidal benthic microalgal biofilms to a coupled light-temperature stress: evidence for latitudinal adaptation along the Atlantic coast of Southern Europe. Martin Laviale , Alexandre Barnett , João Ezequiel , Bernard Lepetit , Silja Frankenbach Environmental Microbiology, 2015, pp.3662-3677. ⟨10.1111/1462-2920.12728⟩ Journal articles hal-01097838v1
	The ``creme brulee'' sampler: A new high-resolution method for the fast vertical sampling of intertidal fine sediments Martin Laviale , João Ezequiel , Catarina Pais , Paulo Cartaxana , João Serôdio Journal of Experimental Marine Biology and Ecology, 2015, 468, pp.37-44. ⟨10.1016/j.jembe.2015.03.013⟩ Journal articles hal-03502733v1
	In vivo estimation of pigment composition and optical absorption cross-sectionby spectroradiometry in four aquatic photosynthetic micro-organisms Vona Méléder , Martin Laviale , Bruno Jesus , Jean-Luc Mouget , Johann Lavaud Journal of Photochemistry and Photobiology B: Biology, 2013, 129, pp.115-124. ⟨10.1016/j.jphotobiol.2013.10.005⟩ Journal articles hal-01096511v1
	A Method for the Rapid Generation of Nonsequential Light-Response Curves of Chlorophyll Fluorescence Joao Serôdio , Joao Ezequiel , Jörg Frommlet , Martin Laviale , Johann Lavaud Plant Physiology, 2013, 163, pp.1089-1102. ⟨10.1104/pp.113.225243⟩ Journal articles hal-01096588v1
	Efficiency of photoprotection in microphytobenthos: role of vertical migration and the xanthophyll cycle against photoinhibition Joao Serôdio , Joao Ezequiel , Alexandre Barnett , Jean-Luc Mouget , Vona Méléder Aquatic Microbial Ecology, 2012, 67, pp.161-175. ⟨10.3354/ame01591⟩ Journal articles hal-01096446v2
	Short term recovery of periphyton photosynthesis after pulse exposition to the photosystem II inhibitors atrazine and isoproturon M. Laviale , Soizic Morin , A. Créach Chemosphere, 2011, 84 (5), pp.731-734. ⟨10.1016/j.chemosphere.2011.03.035⟩ Journal articles hal-02595305v1
	Light modulated toxicity of isoproturon toward natural stream periphyton photosynthesis: a comparison between constant and dynamic light conditions. M. Laviale , J. Prygiel , A. Créach Aquatic Toxicology, 2010, 97, pp.334-342. ⟨10.1016/j.aquatox.2010.01.004⟩ Journal articles hal-00482901v1
	Stream periphyton photoacclimation response in field conditions: effect of community development and seasonal changes M. Laviale , J. Prygiel , Yves Lemoine , Adeline Courseaux , A. Créach Journal of Phycology, 2009, 45 (45), pp.1072-1082 Journal articles hal-00418786v1

	La qualité nutritive du biofilm pour évaluer les effets d’une contamination complexe : le cas de la Cleurie Morgane Jean , Martin Laviale , Sarah Chéron , Amandine Zahm , Valérie Goncalves 42ème Colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2024, Limoges, France Conference papers hal-04703944v1
	Les déformations des diatomées pour évaluer les effets d’une contamination complexe : le cas de la Cleurie. Martin Laviale , David Heudre , V. Felten , Aishwarya Venkataramanan , Cedric Pradalier 42ème Colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2024, Limoges, France Conference papers hal-04703962v1
	Evaluation des effets multiples (environnementaux et sociétaux) d’une contamination chimique complexe d’un écosystème aquatique : premier bilan sur le site atelier de la Cleurie (Vosges) Marie-Noëlle Pons , V. Felten , Sarah Chéron , David Heudre , Chloé Bonnineau 6e colloque Du Réseau des Zones Ateliers CNRS (RZA), Sep 2024, Sainte-Menehould, France Conference papers hal-04703984v1
	Assessing the validity of a large-scale joint Species Distribution Model in the marine realm Elena Berhocoïrigoin , Philippe Le Noac'H , Sakina-Dorothée Ayata , Martin Laviale , Jérémy Fix International Congress in Ecology and Evolution (SFE2 2024), Oct 2024, Lyon, France Conference papers hal-04729185v1
	Reconnaissance automatique des diatomées : quantification de l’incertitude associée aux erreurs d’identification et influence sur l’estimation de l’état écologique des cours d’eau du bassin Rhin-Meuse Aishwarya Venkataramanan , Philippe Usseglio-Polatera , David Heudre , Cedric Pradalier , Martin Laviale 6èmes Journées Internationales de Limnologie et d'Océanographie (JILO6), Oct 2024, Bordeaux, France Conference papers hal-04703930v1
	Gaussian Latent Representations for Uncertainty Estimation using Mahalanobis Distance in Deep Classifiers Aishwarya Venkataramanan , Assia Benbihi , Martin Laviale , Cédric Pradalier 2023 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW), Oct 2023, Paris, France. pp.4490-4499, ⟨10.1109/ICCVW60793.2023.00483⟩ Conference papers hal-04423169v1
	La réponse des biofilms phototrophes au stress thermique dépend-elle de leur complexité, de leur histoire thermique, ou des deux ? Camille Courcoul , Martin Laviale , Vincent Baillard , Elise Billoir , Joséphine Leflaive 41ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2023, Besançon, France Conference papers hal-04208741v1
	Can we Predict Regime Shifts in Shallow Aquatic Systems Exposed to Multiple Stressors? – Conclusions from Micro- and Mesocosm Experiments Elisabeth Maria Gross , Joey Allen , Vinita Vijayaraj , Martin Laviale , Nora Kipferler SETAC EUROPE 33RD ANNUAL MEETING, SETAC, Apr 2023, Dublin, Ireland Conference papers hal-04133275v1
	Reconnaissance automatique des diatomées : évaluation de l’influence des erreurs d’identification sur l’IBD et de l’état écologique des cours d’eau. Exemple du bassin Rhin-Meuse Aishwarya Venkataramanan , Philippe Usseglio-Polatera , David Heudre , Cedric Pradalier , Martin Laviale 41ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2023, Besançon, France Conference papers hal-04208711v1
	Development of a collaborative web-based approach for quantifying diatom deformities Martin Laviale , Iane Vallanzasca , Eric Quinton , Sébastien Boutry , Soizic Morin 14th European Diatom Meeting (EDM 14), May 2023, Meise, Belgium Conference papers hal-04092991v1
	Effect of heat stress on phototrophic biofilm photosynthesis in the context of climate change: a thermal dose approach Martin Laviale , Camille Courcoul , Lorraine Guyot , Vincent Baillard , Elise Billoir 8th European Phycological Congress - EPC8, Aug 2023, Brest, France Conference papers hal-04187554v1
	Functional trait-based approaches as a common framework for aquatic ecologists: Synthesis and recent results Sakina-Dorothée Ayata , Séverine Martini , Martin Laviale , Beatrix E Beisner , Floriane Larras ALSO Aquatic Sciences Meeting, Association for the Sciences of Limnology and Oceanography (ASLO), Jun 2023, Palma de Mallorca, Spain. ⟨10.1002/lno.11655⟩ Conference papers hal-04117032v1
	Integrating Visual and Semantic Similarity Using Hierarchies for Image Retrieval Aishwarya Venkataramanan , Martin Laviale , Cédric Pradalier Computer Vision Systems. ICVS 2023, Sep 2023, Vienne (AUT), Austria. pp.422-431, ⟨10.1007/978-3-031-44137-0_35⟩ Conference papers hal-04423201v1
	Combined effect of agricultural run-off and warming on agricultural streams: a mesocosm experiment Joey Allen , Didier Ortiz , V. Felten , Vinita Vijayaraj , Martin Laviale SFE2 GFÖ EEF Joint Meeting, International Conference on Ecological Sciences : "Ecology and Evolution: New Perspectives and societal challenges", Nov 2022, Metz, France Conference papers hal-03925694v1
	Evaluation des effets d'une contamination chimique complexe d'origine industrielle d'un petit cours d'eau forestier (Vosges, France) : une approche interdisciplinaire Martin Laviale , Sarah Chéron , David Heudre , Marie-Noëlle Pons , Chloé Bonnineau Colloque conjoint en écotoxicologie (CCE 2022), EcotoQ - Centre de recherche en écotoxicologie du Québec, et le Chapitre Saint-Laurent, Jun 2022, Québec, Canada Conference papers hal-03718513v1
	Perception of the scientific expertise within an environmental controversy due to pesticides contamination: the Cleurie River (France) case study Martin Laviale , Pénélope Selhausen-Kosinski , Sarah Chéron , Simon Devin , V. Felten SFE²-GfÖ-EEF Joint meeting, International Conference on Ecological Sciences, Ecology and Evolution : New perspectives and societal challenges, Laboratoire interdisciplinaire des environnements continentaux (Liec, Université de Lorraine); Laboratoire agronomie et environnement (LAE, Université de Lorraine); Animal et fonctionnalités des produits animaux (Urafpa, Université de Lorraine), Nov 2022, Metz, France Conference papers hal-03879414v1
	Développement d’une approche collaborative pour la collecte et l’analyse des images de diatomées d’eau douce : le cas des tératologies Iane Vallanzasca , Martin Laviale , Cyril Regan , David Heudre , Carlos E. Wetzel 40ème colloque de l'Association des Diatomistes de Langue Française (ADLaF), Sep 2022, Clermont-Ferrand, France Conference papers hal-03791615v1
	Impact combiné du ruissellement agricole et du réchauffement climatique sur les producteurs et consommateurs primaires dans les cours d'eau agricoles Elisabeth Maria Gross , Joey Allen , Didier Ortiz , Vinita Vijayaraj , Vincent Felten Colloque annuel de la Société d'Écotoxicologie Fondamentale et Appliquée (SEFA 2022), Jun 2022, Metz, France Conference papers hal-03718543v1
	Can the functional stability of microbial communities exposed to multiple disturbances of the same nature be predicted? Camille Courcoul , Stéphanie Boulêtreau , Vincent Baillard , Martin Laviale , Elise Billoir SFE²-GfÖ-EEF Joint meeting, International Conference on Ecological Sciences, Nov 2022, Metz, France Conference papers hal-03879385v1
	Regards croisés: Using artificial intelligence for ecology, perspectives from a computer scientist and an ecologist Martin Laviale , Cedric Pradalier SFE²-GfÖ-EEF Joint meeting, International Conference on Ecological Sciences, Nov 2022, Metz, France Conference papers hal-03879398v1
	Regime shifts in shallow aquatic systems caused by agricultural run-off and warming – Insights from micro- and mesocosms experiments Elisabeth Maria Gross , Joey Allen , Vinita Vijayaraj , Martin Laviale , Nora Kipferler SFE2 GFÖ EEF Joint Meeting, International Conference on Ecological Sciences : "Ecology and Evolution: New Perspectives and societal challenges", Nov 2022, Metz, France Conference papers hal-03925617v1
	Étude interdisciplinaire de l'évolution d'une rivière urbaine héritant d'un lourd passé industriel, l'Orne Sandrine Pain-Devin , Laurine Malardier , Alice Le Merrer , Xavier Bellanger , Alain Geffard Congrès Conjoint en Ecotoxicologie : "Les enjeux de la contamination urbaine sur la santé environnementale", Chapitre Saint Laurent; Foncer PURE; Regroupement Ecotoq; Réseau Ecobim, May 2021, Montréal, Canada Conference papers hal-03245587v1
	Evaluation de l'impact d'une contamination chronique par micropolluants sur les communautés de diatomées d'un petit cours d'eau Vosgien David Heudre , Sarah Chéron , Vincent Felten , Martin Laviale 39ème colloque de l'Association des Diatomistes de Langue Française (ADLaF), Sep 2021, Aix-en-Provence, France Conference papers hal-03341737v1
	Investigating the effects of increased water temperature and agricultural run-off on shallow lake ecosystem metabolism using a mesocosm approach Gregorio Alejandro López Moreira Mazacotte , Nora Kipferler , Vinita Vijayaraj , Bastian Herbert Polst , Joey Allen 10th International Shallow Lakes Conference, Mar 2021, virtual, Brazil Conference papers hal-03925554v1
	Estimating metabolic rates in a mesocosm experiment to investigate the effects of increased water temperature and agricultural run-off on shallow lake ecosystem functioning and resilience Gregorio Alejandro López Moreira Mazacotte , Nora Kipferler , Vinita Vijayaraj , Bastian Herbert Polst , Joey Allen 2nd International Aquatic Mesocosm Research Symposium - From local processes to cross-domain interactions, Apr 2021, Virtual, Greece Conference papers hal-03925497v1
	Alors, elle est polluée ma rivière ? Enjeux et opportunités de l’expertise scientifique interdisciplinaire Simon Devin , Vincent Felten , Sandrine Pain-Devin , Elisabeth Maria Gross , Martin Laviale Science & You, Université de Lorraine, Nov 2021, Metz, France. pp.384-385 Conference papers hal-03438852v1
	Reconnaissance automatique des diatomées par ordinateur : un défi toujours d’actualité Martin Laviale 39ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2021, Aix-en-Provence, France Conference papers hal-03341733v1
	Tackling inter-class similarity and intra-class variance for microscopic image-based classification Aishwarya Venkataramanan , Martin Laviale , Cécile Figus , Philippe Usseglio-Polatera , Cedric Pradalier 13th International Conference on Computer Vision Systems (ICVS 2021), Sep 2021, Virtual Event, Austria. ⟨10.1007/978-3-030-87156-7_8⟩ Conference papers hal-03341742v1
	Caractérisation des effets d'une contamination complexe par les pesticides d'un petit cours d'eau vosgien emblématique (Cleurie) : une approche interdisciplinaire basée sur les biofilms phototrophes Sarah Chéron , David Heudre , Chloe Bonnineau , Soizic Morin , Marie-Noëlle Pons Colloque SEFA2021 (Société d’Écotoxicologie Fondamentale et Appliquée), Jun 2021, Virtuel, France Conference papers hal-03350562v1
	Direct and indirect effects of agricultural run-off and climate warming on regime shifts in shallow aquatic systems Elisabeth Maria Gross , Joey Allen , Vinita Vijayaraj , Nellya Amoussou , Nora Kipferler SETAC Europe 31th Annual Meeting, May 2021, virtual, Belgium Conference papers hal-03925719v1
	In situ exposure to glyphosate induces tolerance acquisition by phototrophic biofilms: the case study of the Cleurie river (France, Vosges mountains) Sarah Chéron , Vincent Felten , Chloé Bonnineau , Marie-Noëlle Pons , David Heudre First international webinar of young microbial ecotoxicology researchers (ecotoxicomicYR), Dec 2021, Virtual conference, France Conference papers hal-03468924v1
	Mise en place d’un site atelier interdisciplinaire pour l’évaluation des effets multiples (environnementaux et sociétaux) d’une contamination chimique complexe des écosystèmes aquatiques : le cas d’un petit cours d’eau vosgien (Cleurie) Martin Laviale , Sarah Chéron , David Heudre , Marie-Noëlle Pons , Chloé Bonnineau 5e colloque biennal des Zones Ateliers-CNRS, Réseau des Zones Ateliers; CNRS, Nov 2020, Blois, France Conference papers hal-02961671v1
	Vers un site atelier de ruisseaux de plaine : la forêt de la Reine Michael Danger , Martin Laviale , Manon Grange , Vincent Felten , Sylvie Dousset 5ème colloque biennal des Zones Ateliers-CNRS, Nov 2020, Blois, France Conference papers hal-02998427v1
	Characterizing the effects of a complex contamination by pesticides: Preliminary results on the Cleurie River (France), a pilot site for an interdisciplinary approach based on phototrophic biofilms Martin Laviale , Sarah Chéron , David Heudre , Chloé Bonnineau , Soizic Morin EcotoxicoMic 2020 - Second International Conference on Microbial Ecotoxicology, Oct 2020, Montpellier, France Conference papers hal-02950221v1
	A question of complexity: Investigating regime shifts caused by agricultural run-off and climate warming between aquatic plants and microalgae in micro- and mesocosms Elisabeth Maria Gross , Vinita Vijayaraj , Nellya Amoussou , Nora Kipferler , Joey Allen SETAC SciCON, SETAC.org, May 2020, Dublin, Ireland Conference papers hal-03189447v1
	Effets des microorganismes décomposeurs sur les producteurs primaires dans les ruisseaux : allélopathie, stimulation ou compétition ? Joey Allen , Martin Laviale , Maria Cellamare , V. Felten , Joséphine Leflaive 38e colloque de l'Association des Diatomistes de Langue Française (ADLaF), Sep 2019, Metz, France Conference papers hal-03234378v1
	Effet du stress thermique sur les diatomées benthiques dans le contexte du changement climatique : le cas du microphytobenthos intertidal Martin Laviale , Lorraine Guyot , Sakina-Dorothée Ayata , Elise Billoir , Bruno Jesus 38e colloque de l'ADLaF (Association des Diatomistes de Langue Française), Sep 2019, Metz, France Conference papers hal-03234362v1
	Assessment of biomarkers in macrophytes exposed to individual and combined pollutants of agricultural run-off and climate change Vinita Vijayaraj , Sabine Hilt , Joséphine Leflaive , Mechthild Schmitt-Jansen , Herwig Stibor SETAC Helsinki, SETAC.org, May 2019, Helsinki, Finland Conference papers hal-03189451v1
	Importance de la variabilité intraspécifique de la polluosensibilité pour l’évaluation du risque ecotoxicologique basée sur l’approche SSD (Species Sensitivity Distribution) Vincent Baillard , Laurine Malardier , Marie Laure Delignette-Muller , Eva Roubeau Dumont , Arnaud Elger 38ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2019, Metz, France Conference papers hal-03172724v1
	Can microbial functions mediate the impact of multiple stressors on regime shift in lake ecosystems? Joey Allen , Elisabeth Maria Gross , Stéphanie Boulêtreau , Arthur Compin , Camille Courcoul 11th Symposium for European Freshwater Sciences (SEFS), Jun 2019, Zagreb, Croatia Conference papers hal-03232613v1
	Evaluation du potentiel tératogène du glyphosate sur les diatomées benthiques d’eau douce : le cas d’un petit cours d’eau vosgien (Cleurie) Sarah Chéron , David Heudre , C. Bonnineau , Soizic Morin , François Guérold 38ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2019, Metz, France Conference papers hal-03184113v1
	Probing the adhesion of the common freshwater diatom Nitzschia palea at the nanoscale Martin Laviale , Audrey Beaussart , Joey Allen , Fabienne Quilès , Sofiane El-Kirat-Chatel Réunion annuelle Bruker des utilisateurs de microscopies à force atomique et surfacique, Nov 2019, Grenoble, France Conference papers hal-03005471v1
	Caractérisation des propriétés d’adhésion d’une diatomée benthique (Nitzschia palea) à l’échelle nanométrique. Martin Laviale , Audrey Beaussart , Joey Allen , Fabienne Quilès , Sofiane El-Kirat-Chatel 38e colloque de l'Association des Diatomistes de Langue Française (ADLaF), Sep 2019, Metz, France Conference papers hal-03005464v1
	Etude multi-échelle du potentiel indicateur des biofilms phototrophes en zones agricoles: du bassin versant au micro-habitat Chloé Oliger , Joey Allen , Quentin Bachelet , Audrey Beaussart , Michael Danger 37ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2018, Meise, Belgique Conference papers hal-03184152v1
	Multi-scale study of the potential of phototrophic biofilm as functional indicators in agricultural areas: from catchment basin to micro-habitat Chloé Oliger , Joey Allen , Quentin Bachelet , Audrey Beaussart , Michael Danger International Conference of Ecological Sciences SFE², Oct 2018, Rennes, France Conference papers hal-03184165v1
	Etude préliminaire du rôle potentiel du biofilm épiphytique dans la réponse des plantes aquatiques aux herbicides Martin Laviale , Céline Chung , Léa Campagna , Elisabeth Maria Gross 35ème Colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2017, Belvaux, Luxembourg Conference papers hal-03231648v1
	Impact of high temperatures on microalgal viability and photosynthetic activity: consequence for mass cultivation Quentin Béchet , Martin Laviale , Nicolas Arsapin , Hubert Bonnefond , Olivier Bernard 6th congress of the International Society for Applied Phycology (ISAP), Jun 2017, Nantes, France Conference papers hal-03231822v1
	Effets combinés de la lumière et des herbicides sur la diatomée Gomphonema gracile : étude d’un cas de stress multiples et perspectives en écotoxicologie Martin Laviale , Evane Thorel , Nicolas Mazzella , Johann Lavaud , Soizic Morin 35ème Colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2016, Luxembourg, Luxembourg Conference papers hal-03136744v1
	Caractérisation des substances polymériques extracellulaires (EPS) de biofilms de diatomées benthiques marines Steven G Daniel , Cédric Hubas , Hubert Bonnefond , Sophie Sablé , Olivier Bernard 35ème Colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2016, Belvaux, Luxembourg Conference papers hal-03231652v1
	Contrasted short term recovery of periphyton photosynthesis after pulse exposition to the similarly acting herbicides: The photosystem II inhibitors atrazine and isoproturon M. Laviale , Soizic Morin 7th Symposium for European Freshwater Sciences (SEFS), Jun 2011, Girona, Spain. pp.1 Conference papers hal-02595201v1
	Patrons de distribution des diatomées soumises à différents contextes de pollution métallique Soizic Morin , Arielle Cordonier , Isabelle Lavoie , Adeline Arini , Saul Blanco 29ème colloque de l'Association des Diatomistes de Langue Française (ADLaF), Sep 2010, Québec, Canada. pp.1 Conference papers hal-02593813v1

	Leveraging co-occurrence networks’ features to improve diatom-based diagnostic tools of river ecological quality Philippe Le Noac'H , Philippe Usseglio-Polatera , Sakina-Dorothée Ayata , Martin Laviale International Congress in Ecology and Evolution (SFE2 2024), Oct 2024, Lyon, France Conference poster hal-04715745v1
	The new University of Duisburg-Essen diatom digital image training data set (UDE did it v1.0) Michael Kloster , Andrea Burfeid-Castellanos , Danijela Vidacović , Ntambwe Albert Serge Mayombo , Mimoza Dani 16th International Diatom Symposium, Aug 2023, Yamagata, Japan Conference poster hal-04187561v1
	Effet des pesticides sur la morphologie des diatomées benthiques d'eau douce : le cas du glyphosate Sarah Chéron , Aishwarya Venkataramanan , Clara Martinez , Huyên Phong Hamon , David Heudre Colloque annuel de la Société d'Écotoxicologie Fondamentale et Appliquée (SEFA 2022), Jun 2022, Metz, France. Conference poster hal-03718531v1
	Dynamique d'acquisition de la tolérance au glyphosate chez les communautés microbiennes périphytiques : étude en microcosmes. Landry Ughetto , Sarah Chéron , Martin Laviale , Chloé Bonnineau Colloque annuel de la Société d'Écotoxicologie Fondamentale et Appliquée (SEFA 2022), Jun 2022, Metz, France. , 2022 Conference poster hal-03718539v1
	Link between glyphosate exposure and teratological forms in freshwater benthic diatoms Sarah Chéron , Vincent Felten , David Heudre , Aishwarya Venkataramanan , Simon Devin SETAC Europe 32nd annual meeting, May 2022, Copenhaguen, Denmark. Conference poster hal-03718551v1
	Development of a collaborative web platform documenting the diversity and extent of diatom deformities Iane Vallanzasca , Sébastien Boutry , Martin Laviale , Eric Quinton , Soizic Morin EcotoxicoMic 2022- Third International Conference on Microbial Ecotoxicology, Nov 2022, Montpellier, France. pp.1-4 Conference poster hal-03990070v1
	Suivi multi-descripteurs des réponses de microorganismes et de leurs consommateurs à une contamination en azurants optiques Antoine Tourret , Isabelle Lavoie , Martin Laviale , Philippe Juneau , Soizic Morin Colloque conjoint en écotoxicologie (CCE 2022), Jun 2022, Québec, Canada. Conference poster hal-03718519v1
	Fluorescence-based detection of optical brighteners in a peatland Marie-Noëlle Pons , Martin Laviale , Vincent Felten SETAC Europe 31st annual meeting, May 2021, Virtual conference, France Conference poster hal-03328298v1
	Classification automatique des diatomées par apprentissage profond pour l’amélioration du diagnostic écologique des milieux aquatiques Pierre Faure-Giovagnoli , Aishwarya Venkataramanan , Cécile Figus , David Heudre , Thibault de Garidel-Thoron 5ème colloque biennal des Zones Ateliers-CNRS, Nov 2020, Blois, France. Conference poster hal-02961595v1
	Utilisation d’images microscopiques artificielles en complément d’images réelles pour la détection automatique de diatomées par apprentissage profond Pierre Faure-Giovagnoli , Aishwarya Venkataramanan , David Heudre , Thibault de Garidel-Thoron , Philippe Usseglio-Polatera Deep Learning pour le traitement et l'analyse d'image et de son en écologie, Nov 2020, Lyon, France Conference poster hal-02995246v1
	Functional trait-based approaches as a common framework for freshwater and marine ecologists Severine Martini , Floriane Larras , Aurélien Boyé , Emile Faure , Nicole Aberle 11th Symposium for European Freshwater Sciences (SEFS), Jun 2019, Zagreb, Croatia Conference poster hal-03232606v1
	Do leaf litter decomposers control benthic algae production and community structure? Insights from an outdoor mesocosm experiment Joey Allen , Martin Laviale , Maria Cellamare , Quentin Bachelet , V. Felten 11th Symposium for European Freshwater Sciences (SEFS), Jun 2019, Zagreb, Croatia Conference poster hal-03232127v1
	Characterization of diatom adhesion properties on different substrates: from population to individual scale Martin Laviale , Joey Allen , Cédric Hubas , Audrey Beaussart , Sofiane El-Kirat-Chatel 11th Symposium for European Freshwater Sciences (SEFS), Jun 2019, Zagreb, Croatia Conference poster hal-03232063v1
	Impact of agricultural run-off and climate warming on shallow aquatic ecosystems – possible effects on a regime shift between aquatic primary producers Elisabeth Maria Gross , Vinita Vijayaraj , Joséphine Leflaive , Bastian H. Polst , Joey Allen SETAC Helsinki, May 2019, Helsinki, Finland Conference poster hal-03189450v1
	Ecophysiological modeling of the impact of light quantity and quality on microalgae growth in high-density open ponds Philippe Le Noac'H , Sakina Dorothée Ayata , Antoine Sciandra , Olivier Bernard , Martin Laviale Sfecologie 2018 - International Conference on Ecological Sciences, Oct 2018, Rennes, France Conference poster hal-02368696v1
	Restauration contrastée de la photosynthèse du périphyton suite à l'exposition à deux herbicides présentant le même mode d'action (atrazine et isoproturon) M. Laviale , Soizic Morin , A. Créach 30ème colloque de l’Association des Diatomistes de Langue Française (ADLaF), Sep 2011, Boulogne sur mer, France. pp.1, 2011 Conference poster hal-02595784v1
	Consistency in diatom response to metal-contaminated environments Soizic Morin , A. Cordonier , I. Lavoie , A. Arini , Saúl A. Blanco 21st SETAC Europe Annual Meeting, May 2011, Milan, Italy. pp.1, 2011 Conference poster hal-02595063v1

	38ème colloque de l'Association des Diatomistes de Langue Française (ADLaF) : Programme et livre des résumés Martin Laviale , David Heudre , Laura Moreau , Soizic Morin 2019 Books hal-02549502v1

	Diatom primary production in headwater streams: a limited but essential process Joey Allen , Michael Danger , Carlos E. Wetzel , Vincent Felten , Martin Laviale Johannes W Goesling; João Serôdio; Johann Lavaud. Diatoms: Biology & Applications Series, Scrivener Publishing, 2024, Diatom Photosynthesis: From Primary Production to High Value Molecules, 9781119842088 Book sections hal-03879928v1
	A free ride: Diatoms attached on motile diatoms Vincent Roubeix , Martin Laviale S.A. Cohn; K.M. Manoylov; R. Gordon. Diatoms: Biology & Applications, Wiley-Scrivener, 2021, DIGM - Diatom Gliding Motility, ⟨10.1002/9781119526483.ch9⟩ Book sections hal-03006190v1
	Consistency in diatom response to metal-contaminated environments Soizic Morin , A. Cordonier , I. Lavoie , Adeline Arini , Saul Blanco H. Guasch; A. Ginebreda; A. Geiszinger. Emerging and priority pollutants in rivers: bringing science into river management plans, Springer, pp.117-146, 2012, The Handbook of Environmental Chemistry 19, 978-3-642-25721-6. ⟨10.1007/978-3-642-25722-3_5⟩ Book sections hal-02596950v1

	Effets des polluants sur les communautés périphytiques naturelles : apport des mesures de fluorescence chlorophyllienne en lumière modulée (PAM) Martin Laviale 2008 Other publications hal-00305322v1

	Gaussian Latent Representations for Uncertainty Estimation using Mahalanobis Distance in Deep Classifiers Aishwarya Venkataramanan , Assia Benbihi , Martin Laviale , Cedric Pradalier 2023 Preprints, Working Papers, ... hal-04034465v2

	Projets DIAFORM et QUANTIMORPH Martin Laviale , V. Felten Université de lorraine. 2024 Reports hal-04631125v1

Martin Laviale

Publications

Development of a collaborative web platform documenting the diversity and extent of diatom deformities

Concurrent bioimaging of microalgal photophysiology and oxidative stress

Usefulness of synthetic datasets for diatom automatic detection using a deep-learning approach

Disentangling the effects of microalgal diversity and thermal history on freshwater phototrophic biofilms facing heat stress: A thermal dose approach

Multiple-stressor exposure of aquatic food webs: Nitrate and warming modulate the effect of pesticides

Evaluating Multiple Stressor Effects on Benthic–Pelagic Freshwater Communities in Systems of Different Complexities: Challenges in Upscaling

Machine learning techniques to characterize functional traits of plankton from image data

Microalgal food sources greatly improve macroinvertebrate growth in detritus‐based headwater streams: Evidence from an instream experiment

A glance at the French-speaking diatomist community (ADLaF 2019 meeting)

Functional trait-based approaches as a common framework for aquatic ecologists

Disentangling the direct and indirect effects of agricultural runoff on freshwater ecosystems subject to global warming: A microcosm study

Do leaf‐litter decomposers control biofilm primary production and benthic algal community structure in forest streams? Insights from an outdoor mesocosm experiment

Temperature and nutrient effects on the relative importance of brown and green pathways for stream ecosystem functioning: A mesocosm approach

Probing the Adhesion of the Common Freshwater Diatom Nitzschia palea at the Nanoscale

Modeling the impact of high temperatures on microalgal viability and photosynthetic activity

The importance of being fast: comparative kinetics of vertical migration and non-photochemical quenching of benthic diatoms under light stress

Herbicide toxicity on river biofilms assessed by pulse amplitude modulated (PAM) fluorometry

Response of intertidal benthic microalgal biofilms to a coupled light-temperature stress: evidence for latitudinal adaptation along the Atlantic coast of Southern Europe.

The ``creme brulee'' sampler: A new high-resolution method for the fast vertical sampling of intertidal fine sediments

In vivo estimation of pigment composition and optical absorption cross-sectionby spectroradiometry in four aquatic photosynthetic micro-organisms

A Method for the Rapid Generation of Nonsequential Light-Response Curves of Chlorophyll Fluorescence

Efficiency of photoprotection in microphytobenthos: role of vertical migration and the xanthophyll cycle against photoinhibition

Short term recovery of periphyton photosynthesis after pulse exposition to the photosystem II inhibitors atrazine and isoproturon

Light modulated toxicity of isoproturon toward natural stream periphyton photosynthesis: a comparison between constant and dynamic light conditions.

Stream periphyton photoacclimation response in field conditions: effect of community development and seasonal changes

La qualité nutritive du biofilm pour évaluer les effets d’une contamination complexe : le cas de la Cleurie

Les déformations des diatomées pour évaluer les effets d’une contamination complexe : le cas de la Cleurie.

Evaluation des effets multiples (environnementaux et sociétaux) d’une contamination chimique complexe d’un écosystème aquatique : premier bilan sur le site atelier de la Cleurie (Vosges)

Assessing the validity of a large-scale joint Species Distribution Model in the marine realm

Reconnaissance automatique des diatomées : quantification de l’incertitude associée aux erreurs d’identification et influence sur l’estimation de l’état écologique des cours d’eau du bassin Rhin-Meuse

Gaussian Latent Representations for Uncertainty Estimation using Mahalanobis Distance in Deep Classifiers

La réponse des biofilms phototrophes au stress thermique dépend-elle de leur complexité, de leur histoire thermique, ou des deux ?

Can we Predict Regime Shifts in Shallow Aquatic Systems Exposed to Multiple Stressors? – Conclusions from Micro- and Mesocosm Experiments

Reconnaissance automatique des diatomées : évaluation de l’influence des erreurs d’identification sur l’IBD et de l’état écologique des cours d’eau. Exemple du bassin Rhin-Meuse

Development of a collaborative web-based approach for quantifying diatom deformities

Effect of heat stress on phototrophic biofilm photosynthesis in the context of climate change: a thermal dose approach

Functional trait-based approaches as a common framework for aquatic ecologists: Synthesis and recent results

Integrating Visual and Semantic Similarity Using Hierarchies for Image Retrieval

Combined effect of agricultural run-off and warming on agricultural streams: a mesocosm experiment

Evaluation des effets d'une contamination chimique complexe d'origine industrielle d'un petit cours d'eau forestier (Vosges, France) : une approche interdisciplinaire

Perception of the scientific expertise within an environmental controversy due to pesticides contamination: the Cleurie River (France) case study

Développement d’une approche collaborative pour la collecte et l’analyse des images de diatomées d’eau douce : le cas des tératologies

Impact combiné du ruissellement agricole et du réchauffement climatique sur les producteurs et consommateurs primaires dans les cours d'eau agricoles

Can the functional stability of microbial communities exposed to multiple disturbances of the same nature be predicted?

Regards croisés: Using artificial intelligence for ecology, perspectives from a computer scientist and an ecologist

Regime shifts in shallow aquatic systems caused by agricultural run-off and warming – Insights from micro- and mesocosms experiments

Étude interdisciplinaire de l'évolution d'une rivière urbaine héritant d'un lourd passé industriel, l'Orne

Evaluation de l'impact d'une contamination chronique par micropolluants sur les communautés de diatomées d'un petit cours d'eau Vosgien

Investigating the effects of increased water temperature and agricultural run-off on shallow lake ecosystem metabolism using a mesocosm approach

Estimating metabolic rates in a mesocosm experiment to investigate the effects of increased water temperature and agricultural run-off on shallow lake ecosystem functioning and resilience

Alors, elle est polluée ma rivière ? Enjeux et opportunités de l’expertise scientifique interdisciplinaire

Reconnaissance automatique des diatomées par ordinateur : un défi toujours d’actualité

Tackling inter-class similarity and intra-class variance for microscopic image-based classification

Caractérisation des effets d'une contamination complexe par les pesticides d'un petit cours d'eau vosgien emblématique (Cleurie) : une approche interdisciplinaire basée sur les biofilms phototrophes

Direct and indirect effects of agricultural run-off and climate warming on regime shifts in shallow aquatic systems

In situ exposure to glyphosate induces tolerance acquisition by phototrophic biofilms: the case study of the Cleurie river (France, Vosges mountains)

Mise en place d’un site atelier interdisciplinaire pour l’évaluation des effets multiples (environnementaux et sociétaux) d’une contamination chimique complexe des écosystèmes aquatiques : le cas d’un petit cours d’eau vosgien (Cleurie)

Vers un site atelier de ruisseaux de plaine : la forêt de la Reine

Characterizing the effects of a complex contamination by pesticides: Preliminary results on the Cleurie River (France), a pilot site for an interdisciplinary approach based on phototrophic biofilms

A question of complexity: Investigating regime shifts caused by agricultural run-off and climate warming between aquatic plants and microalgae in micro- and mesocosms

Effets des microorganismes décomposeurs sur les producteurs primaires dans les ruisseaux : allélopathie, stimulation ou compétition ?

Effet du stress thermique sur les diatomées benthiques dans le contexte du changement climatique : le cas du microphytobenthos intertidal

Assessment of biomarkers in macrophytes exposed to individual and combined pollutants of agricultural run-off and climate change

Importance de la variabilité intraspécifique de la polluosensibilité pour l’évaluation du risque ecotoxicologique basée sur l’approche SSD (Species Sensitivity Distribution)

Can microbial functions mediate the impact of multiple stressors on regime shift in lake ecosystems?

Evaluation du potentiel tératogène du glyphosate sur les diatomées benthiques d’eau douce : le cas d’un petit cours d’eau vosgien (Cleurie)

Probing the adhesion of the common freshwater diatom Nitzschia palea at the nanoscale

Caractérisation des propriétés d’adhésion d’une diatomée benthique (Nitzschia palea) à l’échelle nanométrique.

Etude multi-échelle du potentiel indicateur des biofilms phototrophes en zones agricoles: du bassin versant au micro-habitat

Multi-scale study of the potential of phototrophic biofilm as functional indicators in agricultural areas: from catchment basin to micro-habitat

Etude préliminaire du rôle potentiel du biofilm épiphytique dans la réponse des plantes aquatiques aux herbicides

Impact of high temperatures on microalgal viability and photosynthetic activity: consequence for mass cultivation

Effets combinés de la lumière et des herbicides sur la diatomée Gomphonema gracile : étude d’un cas de stress multiples et perspectives en écotoxicologie

Caractérisation des substances polymériques extracellulaires (EPS) de biofilms de diatomées benthiques marines

Contrasted short term recovery of periphyton photosynthesis after pulse exposition to the similarly acting herbicides: The photosystem II inhibitors atrazine and isoproturon

Patrons de distribution des diatomées soumises à différents contextes de pollution métallique

Leveraging co-occurrence networks’ features to improve diatom-based diagnostic tools of river ecological quality

The new University of Duisburg-Essen diatom digital image training data set (UDE did it v1.0)