Mathieu Besson

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Publications

Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex

François Allal , Mathieu Besson , Emilie Delpuech , Chloé Barrier-Loiseau , Alain Vergnet et al.
Aquaculture, 2025, 595, pp.741682. ⟨10.1016/j.aquaculture.2024.741682⟩
Article dans une revue hal-04754459 v1

Corrigendum to “Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex” [Aquaculture Volume 595, Part 2, 30 January 2025, 741682].

François Allal , Mathieu Besson , Emilie Delpuech , Chloé Barrier-Loiseau , Alain Vergnet et al.
Aquaculture, 2025, 605, pp.742499. ⟨10.1016/j.aquaculture.2025.742499⟩
Article dans une revue hal-05051395 v1
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APIS: an updated parentage assignment software managing triploids induced from diploid parents

Julien Roche , Ronan Griot , François Allal , Mathieu Besson , Pierrick Haffray et al.
Article dans une revue hal-04649084 v1
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Assessing the environmental impacts of conventional and organic scenarios of rainbow trout farming in France

Simon Pouil , Mathieu Besson , Florence Phocas , Joël Aubin
Journal of Cleaner Production, 2024, 456, pp.142296. ⟨10.1016/j.jclepro.2024.142296⟩
Article dans une revue hal-04639960 v1
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Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata)

Josep Calduch-Giner , Enrique Rosell-Moll , Mathieu Besson , Alain Vergnet , Jean-Sébastien Bruant et al.
Aquaculture Reports, 2023, 29, pp.101476. ⟨10.1016/j.aqrep.2023.101476⟩
Article dans une revue hal-03948385 v1
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Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass

Emilie Delpuech , Marc Vandeputte , Romain Morvezen , Anastasia Bestin , Mathieu Besson et al.
Genetics Selection Evolution, 2023, 55, pp.30. ⟨10.1186/s12711-023-00805-2⟩
Article dans une revue hal-04116035 v1
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Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits

Mathieu Besson , Nicky Rombout , Germain Salou , Alain Vergnet , Sophie Cariou et al.
Aquaculture Reports, 2022, 24, ⟨10.1016/j.aqrep.2022.101132⟩
Article dans une revue hal-03679214 v1
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An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax

Charles Rodde , Hugues de Verdal , Marc Vandeputte , François Allal , Julie Nati et al.
Journal of Animal Science, 2021, 99 (6), pp.1-9. ⟨10.1093/jas/skab152⟩
Article dans une revue hal-03360566 v1
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Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax)

Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Frédéric Clota et al.
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.578976⟩
Article dans une revue hal-03150873 v1
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The genetic correlation between feed conversion ratio and growth rate affects the design of a breeding program for more sustainable fish production

Mathieu Besson , Hans Komen , Gus Rose , Marc Vandeputte
Genetics Selection Evolution, 2020, 52 (1), pp.5. ⟨10.1186/s12711-020-0524-0⟩
Article dans une revue hal-02472099 v1
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Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Frontiers in Genetics, 2019, 10, pp.1-14. ⟨10.3389/fgene.2019.00219⟩
Article dans une revue hal-02403255 v1
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Derivation of economic values for production traits in aquaculture species

Kasper Janssen , Paul Berentsen , Mathieu Besson , Hans Komen
Genetics Selection Evolution, 2017, 49 (1), pp.5. ⟨10.1186/s12711-016-0278-x⟩
Article dans une revue hal-01479138 v1
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Effect of production quotas on economic and environmental values of growth rate and feed efficiency in sea cage fish farming

Mathieu Besson , I.J.M. de Boer , Marc Vandeputte , J.A.M. van Arendonk , Edwige Quillet et al.
PLoS ONE, 2017, 12 (3), pp.1-15. ⟨10.1371/journal.pone.0173131⟩
Article dans une revue hal-01606037 v1

Economic values of growth rate, feed intake, feed conversion ratio, mortality and uniformity for Nile tilapia

S. K. Omasaki , K. Janssen , Mathieu Besson , H. Komen
Aquaculture, 2017, 481, pp.124-132. ⟨10.1016/j.aquaculture.2017.04.013⟩
Article dans une revue hal-02625124 v1

Environmental impacts of genetic improvement of growth rate and feed conversion ratio in fish farming under rearing density and nitrogen output limitations

Mathieu Besson , Joël Aubin , H. Komen , M. Poelman , Edwige Quillet et al.
Journal of Cleaner Production, 2016, 116, pp.100-109. ⟨10.1016/j.jclepro.2015.12.084⟩
Article dans une revue hal-01461081 v1

Influence of water temperature on the economic value of growth rate in fish farming: The case of sea bass (Dicentrarchus labrax) cage farming in the Mediterranean

Mathieu Besson , Marc Vandeputte , J.A.M. van Arendonk , Joël Aubin , I.J.M. de Boer et al.
Aquaculture, 2016, 462, pp.47-55. ⟨10.1016/j.aquaculture.2016.04.030⟩
Article dans une revue hal-02637880 v1

Economic values of growth and feed efficiency for fish farming in recirculating aquaculture system with density and nitrogen output limitations: a case study with African catfish ([i]Clarias gariepinus[/i])

Mathieu Besson , H. Komen , Joël Aubin , I.J.M. de Boer , M. Poelman et al.
Journal of Animal Science, 2014, 92 (12), pp.5394-5405. ⟨10.2527/jas.2014-8266⟩
Article dans une revue hal-01194061 v1

LACTOTRUITE, un projet d‘amélioration de la résilience de la filière truite face à l’émergence d’une bactériose en Bretagne, la lactococcose

Yoannah François , Sandrine Baron , Florence Tardy , Emmanuelle Moreau , Ségolène Calvez et al.
8. Journées de la Recherche Filière Piscicole, ITAVI, Jul 2024, Rennes, France
Communication dans un congrès hal-04696893 v1

Genotype by environment interaction explain sex determination in the European Seabass

Benjamin Geffroy , Mathieu Besson , Núria Sánchez-Baizán , Frédéric Clota , Alexander Goikoetxea et al.
12th International Symposium on Reproductive Physiology of Fish, May 2023, Hersonisos - Crète, Greece
Communication dans un congrès hal-04185947 v1
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AN R-BASED PIPELINE FOR GENOTYPE CALLING AND PARENTAGE ASSIGNMENT OF TRIPLOID OFFSPRING TO THEIR DIPLOID PARENTS

Mathieu Besson , Julien Roche , Pierre Patrice , Pierrick Haffray , François Allal et al.
Aquaculture Europe 2023, Sep 2023, Vienne, Austria
Communication dans un congrès hal-04385840 v1

Cartographie fine de la résistance à la nécrose nerveuse virale chez le bar identifiée par séquençage du génome entier

Emilie Delpuech , Marc Vandeputte , Florence Phocas , Yoannah François , Anastasia Bestin et al.
7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France
Communication dans un congrès hal-04185459 v1
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WHOLE GENOME SEQUENCING TO REFINE THE DETECTION OF QTL FOR VIRAL NERVOUS NECROSIS IN EUROPEAN SEA BASS (DICENTRARCHUS LABRAX)

Emilie Delpuech , Marc Vandeputte , Florence Phocas , Anastasia Bestin , Mathieu Besson et al.
6th symposium on Genomics in Aquaculture Symposium, May 2022, Grenade, Spain
Communication dans un congrès hal-04116026 v1

Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade

Jonathan D’ambrosio , Mathieu Besson , Anastasia Bestin , Jean-Sébastien Bruant , Aline Bajek et al.
7. Journées de la Recherche Piscicole, Jul 2022, Paris, France
Communication dans un congrès anses-03889117 v1

Can genomics improve the selection efficiency of sea bream (Sparus aurata) candidates reared in sanitary protected RAS when GxE exist with the production environment in open-sea cages?

Anastasia Bestin , Jonathan D’ambrosio , Mathieu Besson , F Massieu , Alain Vergnet et al.
XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile
Communication dans un congrès hal-04185868 v1
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Can we combine genetics and a two-step temperature control to move towards monosex European seabass Dicentrarchus labrax?

Marc Vandeputte , Frédéric Clota , Alain Vergnet , Marie-Odile Blanc , Stéphane Lallement et al.
Aquaculture Europe 2022, Sep 2022, Rimini, Italy
Communication dans un congrès hal-04185712 v1

Fine mapping for Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) identified by whole genome sequencing

Emilie Delpuech , Marc Vandeputte , Florence Phocas , Anastasia Bestin , Mathieu Besson et al.
Aquaculture Europe 2022, Sep 2022, Rimini, Italy
Communication dans un congrès hal-04185721 v1

IFI6, an interferon alpha induced protein, identified by whole genome sequencing as involved in Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax)

Emilie Delpuech , Marc Vandeputte , Romain Morvezen , Anastasia Bestin , Mathieu Besson et al.
International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile
Communication dans un congrès hal-04185918 v1

Improving feed efficiency in fish: let’s get down to business

François Allal , Mathieu Besson , Alain Vergnet , David J Mckenzie , Frédéric Clota et al.
Aquaculture Europe 2022, Sep 2022, Rimini, Italy
Communication dans un congrès hal-04185734 v1

Combined genomic approaches to unravel sex determination in the European seabass

François Allal , Mathieu Besson , Núria Sánchez-Baizán , Frédéric Clota , Alexander Goikoetxea et al.
6. Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain
Communication dans un congrès hal-04185371 v1

Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass

Mathieu Besson , David J Mckenzie , Julie J.H Nati , Salou Germain , Alain Vergnet et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Communication dans un congrès hal-03360559 v1

Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line

Anastasia Bestin , Mathieu Besson , Alain Vergnet , François Allal , Frédéric Clota et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Communication dans un congrès hal-03360548 v1

Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass.

François Allal , Mathieu Besson , Bastien Sadoul , François Ruelle , Pegart Mako et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Communication dans un congrès hal-03360554 v1

Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel

Mathieu Besson , François Allal , Alain Vergnet , Frédéric Clota , Sophie Cariou et al.
6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France
Communication dans un congrès hal-02264927 v1

Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass

Mathieu Besson , Marc Vandeputte , François Allal , Patrick Prunet , Marie-Laure Bégout et al.
6. International Symposium and Thematic School on ‘Dynamic energy Budget theory for metabolic organization’ (DEB2019), Apr 2019, Brest, France. pp.47
Communication dans un congrès hal-03187437 v1

Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
AQUA 2018, Aug 2018, Montpellier, France
Communication dans un congrès hal-03187434 v1

Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand
Communication dans un congrès hal-03156802 v1

Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Genetics and Breeding in Aquaculture: North meets South, May 2018, Bergen, Norway
Communication dans un congrès hal-03156894 v1

Sélection du bar pour l’efficacité alimentaire: on y arrive

Mathieu Besson , Francois Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Journée du SFAM, Mar 2018, Montpellier, France
Communication dans un congrès hal-03156814 v1

Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Journées Techniques du Sysaaf, Dec 2017, Rennes, France
Communication dans un congrès hal-03156749 v1

Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar

Mathieu Besson , Béatrice Chatain , Alain Vergnet , Frédéric Clota , Sebastien Ferrari et al.
Journée du SFAMN, Mar 2017, Montpellier, France
Communication dans un congrès hal-03155384 v1

Using the right breeding objective can decrease environmental impacts and increase farm profit of sea cage farming with different quota restrictions

Mathieu Besson , Hans Komen , Gus Rose , Edwige Quillet , Johan A. M. van Arendonk et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia
Communication dans un congrès hal-03155415 v1

Efficacité d’une sélection pour la résistance au jeûne

François Allal , Marc Vandeputte , Alain Vergnet , Frédéric Clota , Mathieu Besson et al.
Journées Techniques du Sysaaf, Dec 2017, Rennes, France
Communication dans un congrès hal-03156744 v1

Impact économique de l’amélioration génétique

Mathieu Besson , Marc Vandeputte , Joël Aubin , Imke J.M. de Boer , Edwige Quillet et al.
Journée du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2016, La Grande Motte, France
Communication dans un congrès hal-02796737 v1

Economic and environmental effects fo genetic improvement of growth rate and feed conversion ratio in sea cage farming with production and feed quota

Mathieu Besson , Hans Komen , Joël Aubin , Johan van Arendonk , Imke J.M. de Boer et al.
Aquaculture Europe 2015, Oct 2015, Rotterdam, Netherlands
Communication dans un congrès hal-01461082 v1

Economic and environmental effects of selection on growth rate and feed conversion ratio in sea cage farming with or without production and feed quota

Mathieu Besson , Marc Vandeputte , Joël Aubin , J.A.M. van Arendonk , Imke J.M. de Boer et al.
Aquaculture 2015: Cutting edge science in Aquaculture, Aug 2015, Montpellier, France
Communication dans un congrès hal-01461083 v1
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Economic and environmental impacts of genetic improvement in fish depend on limiting factors

Mathieu Besson , Marc Vandeputte , Joël Aubin , J.A.M. van Arendonk , Imke J.M. de Boer et al.
ISGA XII, Jun 2015, Santiago de Compostela, Spain
Communication dans un congrès hal-01461084 v1

Valeurs économiques de l’efficacité alimentaire et du taux de croissance en système recirculé : exemple du Clarias

Mathieu Besson , Marc Vandeputte , H. Komen , Joël Aubin , M. Poelman et al.
Journée du Syndicat Français de l'Aquaculture Marine (SFAM), Mar 2014, Montpellier, France
Communication dans un congrès hal-01461087 v1

Quels sont les impacts économiques et environnementaux de la sélection génétique pour la croissance et l'efficacité alimentaire en pisciculture ?

Mathieu Besson , H. Komen , Joël Aubin , Imke J.M. de Boer , Edwige Quillet et al.
4. Journées Recherche Filière Piscicole (JRFP), Jul 2014, Paris, France
Communication dans un congrès hal-01461086 v1
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Assessing the environmental impacts of conventional and organic scenarios of rainbow trout farming in France

Simon Pouil , Mathieu Besson , Florence Phocas , Joël Aubin
14. LCA Food International Conference, Sep 2024, Barcelone, Spain
Poster de conférence hal-04745288 v1

Efficiency of genomic selection by imputation in sea bass and sea bream to improve processing traits and resistance to Viral Nervous Necrosis

Jonathan D’ambrosio , Anastasia Bestin , Mathieu Besson , Romain Morvezen , Aline Bajek et al.
XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile
Poster de conférence hal-04185895 v1

Interest of artificial intelligence to predict fillet yield in rainbow trout

Jonathan D’ambrosio , Tarek Chalioui , Jean Ruche , Alexandre Desgranges , Marc Vandeputte et al.
XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile
Poster de conférence hal-04185903 v1

Aquakultor: le premier jeu de simulation en aquaculture

François Allal , Mathieu Besson , - Tomagamestudio
6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019
Poster de conférence hal-02735109 v1

Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax

Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Alain Vergnet et al.
Aquaculture Europe 2019, Oct 2019, Berlin, Germany.
Poster de conférence hal-03187449 v1
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Selective breeding to reduce the ecological footprint of aquaculture

Marc Vandeputte , Mathieu Besson , François Allal , Florence Phocas , Edwige Quillet
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia.
Poster de conférence hal-03156701 v1
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A medium-throughput method to phenotype fish for individual feed efficiency

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia.
Poster de conférence hal-03155407 v1
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Environmental impacts of genetic improvement in growth rate and feed conversion in fish farming under density and nitrogen limitation

Mathieu Besson , Joël Aubin , J.A.M. van Arendonk , H. Komen , M. Poelman et al.
9. International Conference on Life Cycle Assessment in the Agri-Food Sector (LCA Food 2014), Sep 2014, San Francisco, United States. 2014, Proceedings of the 9th International Conference on Life Cycle Assessment in the Agri-Food Sector
Poster de conférence hal-01194152 v1
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Economic and environmental impacts of improving growth rate and feed efficiency in fish farming depend on nitrogen and density limitation

Mathieu Besson , H. Komen , Marc Vandeputte , Joël Aubin , Imke J.M. de Boer et al.
10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production
Poster de conférence hal-01461085 v1