Matthieu BARRET Research Director INRAE

Identifiants chercheurs

IdHAL :

matthieu-barret

ORCID :

0000-0002-7633-8476

IdRef :

136763251

Présentation

Publications

Article dans une revue (71)

Lactuchelins represent lipopeptide siderophores produced by &lt;i&gt;Pseudomonas lactucae&lt;/i&gt; that inhibit &lt;i&gt;Xanthomonas campestris&lt;/i&gt; Guillaume Chesneau,Alba Noel,Dimitri Bréard,Alice Boulanger,Martial Briandet al. The International Society of Microbiologial Ecology Journal, 2026, 20 (1), ⟨10.1093/ismejo/wrag003⟩ Article dans une revue hal-05529897v1
Dormancy and reactivation of the seed and its microbiome: a holobiont perspective Davide Gerna,Thomas Chadelaud,Florian Lamouche,Matthieu Barret,Armelle Darrasseet al. mSystems, 2026, 11 (1), pp.e0114025. ⟨10.1128/msystems.01140-25⟩ Article dans une revue hal-05556397v1
Deep-learning-ready RGB-depth images of seedling development Félix Mercier,Geoffroy Couasnet,Angelina El Ghaziri,Nizar Bouhlel,Alain Sarniguetet al. Plant Methods, 2025, 21, 14 p. ⟨10.1186/s13007-025-01334-3⟩ Article dans une revue hal-04948208v1
Sowing success: ecological insights into seedling microbial colonisation for robust plant microbiota engineering Oscar Joubert,Gontran Arnault,Matthieu Barret,Marie Simonin Trends in Plant Science, 2025, 30 (1), pp.21-34. ⟨10.1016/j.tplants.2024.09.004⟩ Article dans une revue hal-05081372v1
T6SS-mediated competition by Stenotrophomonas rhizophila shapes seed-borne bacterial communities and seed-to-seedling transmission dynamics Tiffany Garin,Agathe Brault,Coralie Marais,Martial Briand,Anne Préveauxet al. mSystems, 2025, 10 (8), pp.e00457-25. ⟨10.1128/msystems.00457-25⟩ Article dans une revue hal-05293005v1
Le microbiote des semences : diversité, assemblage et transmission Matthieu Barret Notes académiques de l'Académie d'agriculture de France., 2025, 20 Article dans une revue (article de synthèse) hal-05300075v1
Elucidating the interplay between metabolites and microorganisms in the spermosphere of common bean ( Phaseolus vulgaris L.) seeds Chandrodhay Saccaram,Marie Simonin,Stéphanie Boutet,Céline Brosse,Shuang Penget al. mSystems, 2025, 10 (8), pp.e00707-25. ⟨10.1128/msystems.00707-25⟩ Article dans une revue hal-05533608v1
The type VI secretion system of Stenotrophomonas rhizophila CFBP13503 limits the transmission of Xanthomonas campestris pv. campestris 8004 from radish seeds to seedlings Tiffany Garin,Chrystelle Brin,Anne Préveaux,Agathe Brault,Martial Briandet al. Molecular Plant Pathology, 2024, 25 (1), pp.e13412. ⟨10.1111/mpp.13412⟩ Article dans une revue hal-04688341v1
Transcriptomic dataset of Phaseolus vulgaris leaves in response to the inoculation of pathogenic Xanthomonas citri pv. fuscans and its type III secretion system-defective mutant hrcV Christopher Gihaut,Chrystelle Brin,Martial Briand,Jérôme Verdier,Matthieu Barretet al. Data in Brief, 2024, 57, pp.110938. ⟨10.1016/j.dib.2024.110938⟩ Article dans une revue (data paper) hal-05263393v1
Stable, multigenerational transmission of the bean seed microbiome despite abiotic stress Abby Sulesky-Grieb,Marie Simonin,A. Fina Bintarti,Brice Marolleau,Matthieu Barretet al. mSystems, 2024, 9 (11), ⟨10.1128/msystems.00951-24⟩ Article dans une revue hal-04688340v1
Seedling microbiota engineering using bacterial synthetic community inoculation on seeds Gontran Arnault,Coralie Marais,Anne Préveaux,Martial Briand,Anne-Sophie Poissonet al. FEMS Microbiology Ecology, 2024, 100 (4), ⟨10.1093/femsec/fiae027⟩ Article dans une revue hal-04688333v1
A stage‐dependent seed defense response to explain efficient seed transmission of Xanthomonas citri pv. fuscans to common bean Armelle Darrasse,Łukasz Paweł Tarkowski,Martial Briand,David Lalanne,Nicolas Chenet al. Plant, Cell and Environment, 2024, ⟨10.1111/pce.15037⟩ Article dans une revue hal-04665509v1
Honey bees change the microbiota of pollen Alberto Prado,Matthieu Barret,Bernard Vaissière,Gloria Torres-Cortes Botanical sciences, 2023, 101 (1), pp.127-133. ⟨10.17129/botsci.3125⟩ Article dans une revue hal-04044122v1
Transmission of synthetic seed bacterial communities to radish seedlings: impact on microbiota assembly and plant phenotype Marie Simonin,Anne Préveaux,Coralie Marais,Tiffany Garin,Gontran Arnaultet al. Peer Community Journal, 2023, 3, pp.e95. ⟨10.24072/pcjournal.329⟩ Article dans une revue hal-04688330v1
Single seed microbiota: assembly and transmission from parent plant to seedling Guillaume Chesneau,Béatrice Laroche,Anne Préveaux,Coralie Marais,Martial Briandet al. mBio, 2022, 13 (6), pp.0164822. ⟨10.1128/mbio.01648-22⟩ Article dans une revue hal-03834661v1
Defining Composition and Function of the Rhizosphere Microbiota of Barley Genotypes Exposed to Growth-Limiting Nitrogen Supplies Rodrigo Alegria Terrazas,Senga Robertson-Albertyn,Aileen Mary Corral,Carmen Escudero-Martinez,Rumana Kapadiaet al. mSystems, 2022, 7 (6), pp.00934-22. ⟨10.1128/msystems.00934-22⟩ Article dans une revue hal-03889528v1
Seed microbiota revealed by a large-scale meta-analysis including 50 plant species Marie Simonin,Martial Briand,Guillaume Chesneau,Aude Rochefort,Coralie Maraiset al. New Phytologist, 2022, 234 (4), pp.1448-1463. ⟨10.1111/nph.18037⟩ Article dans une revue hal-03299446v1
A rapid and simple method for assessing and representing genome sequence relatedness Martial Briand,M Bouzid,G Hunault,M Legeay,Marion Fischer-Le Sauxet al. Peer Community Journal, 2021, 1, pp.e24. ⟨10.24072/pcjournal.37⟩ Article dans une revue hal-03560813v1
Cross-linkage between bacterial taxonomy and gene functions: a study of metagenome-assembled genomes of Gut Microbiota in adult non-alcoholic fatty liver disease. Clemence Canivet,Norma David,Helene Pailhoriès,Martial Briand,Cynthia Guyet al. Alimentary Pharmacology & Therapeutics, 2021, ⟨10.1111/apt.16262⟩ Article dans une revue hal-03138752v1
Maternal effects shape the seed mycobiome in Quercus petraea Tania Fort,Charlie Pauvert,Amy Zanne,Otso Ovaskainen,Thomas Caignardet al. New Phytologist, In press, pp.1-15. ⟨10.1111/nph.17153⟩ Article dans une revue hal-03140262v1
Assessing the Cultivability of Bacteria and Fungi from Arable Crop Residues Using Metabarcoding Data as a Reference Valerie Laval,Lydie Kerdraon,Matthieu Barret,Anne-Lise Liabot,Coralie Maraiset al. Diversity, 2021, 13 (9), pp.404. ⟨10.3390/d13090404⟩ Article dans une revue hal-03368843v1
Transmission of Seed and Soil Microbiota to Seedling Aude Rochefort,Marie Simonin,Coralie Marais,Anne-Yvonne Guillerm-Erckelboudt,Matthieu Barretet al. mSystems, 2021, 6 (3), pp.00446-21. ⟨10.1128/msystems.00446-21⟩ Article dans une revue hal-03299428v1
Temporal dynamics of bacterial communities during seed development and maturation Guillaume Chesneau,Gloria Torres-Cortes,Martial Briand,Armelle Darrasse,Anne Preveauxet al. FEMS Microbiology Ecology, 2020, 96 (12), pp.fiaa190. ⟨10.1093/femsec/fiaa190⟩ Article dans une revue hal-02972234v1
Impact of a resistance gene against a fungal pathogen on the plant host residue microbiome: The case of the Leptosphaeria maculans–Brassica napus pathosystem Lydie Kerdraon,Matthieu Barret,Marie‐hélène Balesdent,Frédéric Suffert,Valerie Laval Molecular Plant Pathology, 2020, 21 (12), pp.1545-1558. ⟨10.1111/mpp.12994⟩ Article dans une revue hal-04567438v1
Insect pollination: an ecological process involved in the assembly of the seed microbiota Alberto Prado Farias,Brice Marolleau,Bernard Vaissière,Matthieu Barret,Gloria Torres-Cortés Scientific Reports, 2020, 10 (1), ⟨10.1038/s41598-020-60591-5⟩ Article dans une revue hal-02623164v1
rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing Jean-Claude Ogier,Sylvie Pages,Maxime Galan,Matthieu Barret,Sophie Gaudriault BMC Microbiology, 2019, 19, ⟨10.1186/s12866-019-1546-z⟩ Article dans une revue hal-02627663v1
Crop Residues in Wheat-Oilseed Rape Rotation System: a Pivotal, Shifting Platform for Microbial Meetings Lydie Kerdraon,Marie-Helene Balesdent,Matthieu Barret,Valerie Laval,Frederic Suffert Microbial ecology, 2019, 77 (4), pp.931 - 945. ⟨10.1007/s00248-019-01340-8⟩ Article dans une revue hal-02620072v1
Differential dynamics of microbial community networks help identify microorganisms interacting with residue-borne pathogens: the case of &lt;em&gt;Zymoseptoria tritici&lt;/em&gt; in wheat; Lydie Kerdraon,Matthieu Barret,Valerie Laval,Frédéric Suffert Microbiome, 2019, 7 (1), pp.125 et suiv. ⟨10.1101/587667⟩ Article dans une revue hal-02624822v1
Maternal effects and environmental filtering shape seed fungal communities in oak trees Tania Fort,Charlie Pauvert,Amy E. Zanne,Otso Ovaskainen,Thomas Caignardet al. BioRxiv, 2019, ⟨10.1101/691121⟩ Article dans une revue hal-02624819v1
Differences in resource use lead to coexistence of seed-transmitted microbial populations Gloria Torres-Cortés,B. J. Garcia,Stéphane Compant,Samir Rezki,P Joneset al. Scientific Reports, 2019, 9 (1), pp.6648. ⟨10.1038/s41598-019-42865-9⟩ Article dans une revue hal-02557440v1
Optimize the plant microbiota to increase plant growth and health Matthieu Barret,P. Dufour,Mylène Durand-Tardif,Mahendra Mariadassou,Christophe Mougelet al. Consortium Biocontrôle et GIS Biotechnologies Vertes , 2019, ⟨10.15454/1fve-e105⟩ Article dans une revue hal-03297096v1
Insect pollination is an ecological process involved in the assembly of the seed microbiota Alberto Prado Farias,Brice Marolleau,Bernard Vaissière,Matthieu Barret,Gloria Torres Cortes BioRxiv, 2019, ⟨10.1101/626895⟩ Article dans une revue hal-02624711v1
A rapid and simple method for assessing and representing genome sequences relatedness Martial Briand,Mariam Bouzid,Gilles Hunault,Marc Legeay,Marion Le Sauxet al. BioRxiv, 2019, ⟨10.1101/569640⟩ Article dans une revue hal-02171444v1
Influence of environment and host plant genotype on the structure and diversity of the Brassica napus seed microbiota Aude Rochefort,Martial Briand,Coralie Marais,Marie-Hélène Wagner,Anne Lapercheet al. Phytobiomes Journal, 2019, 3 (4), pp.326-336. ⟨10.1094/PBIOMES-06-19-0031-R⟩ Article dans une revue hal-02275205v1
Assembly of seed-associated microbial communities within and across successive plant generations Samir Rezki,Claire Campion,Philippe Simoneau,Marie-Agnès Jacques,Ashley Shadeet al. Plant and Soil, 2018, 422 (1-2), pp.67-79. ⟨10.1007/s11104-017-3451-2⟩ Article dans une revue hal-02516590v1
Editorial special issue: the soil, the seed, the microbes and the plant Eric Nelson,Philippe Simoneau,Matthieu Barret,Birgit Mitter,Stéphane Compant Plant and Soil, 2018, 422 (1-2), pp.1-5. ⟨10.1007/s11104-018-3576-y⟩ Article dans une revue hal-02516579v1
Complete genomic sequence of Raphanus sativus cryptic virus 4 (RsCV4), a novel alphapartitivirus from radish Laurence Svanella-Dumas,Sébastien Theil,Matthieu Barret,Thierry Candresse Archives of Virology, 2018, 163 (4), pp.1097-1100. ⟨10.1007/s00705-017-3693-6⟩ Article dans une revue hal-02516679v1
In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana Claudia Bartoli,Léa Frachon,Matthieu Barret,Mylène Rigal,Carine Huard-Chauveauet al. The International Society of Microbiologial Ecology Journal, 2018, 12 (8), pp.2024-2038. ⟨10.1038/s41396-018-0152-7⟩ Article dans une revue hal-02373577v1
Niches and routes of transmission of Xanthomonas citri pv. fuscans to bean seeds Armelle Darrasse,Matthieu Barret,Sophie Cesbron,Stéphane Compant,Marie-Agnès Jacques Plant and Soil, 2018, 422 (1-2), pp.115-128. ⟨10.1007/s11104-017-3329-3⟩ Article dans une revue hal-02516672v1
Genome sequence of the necrotrophic plant pathogen Alternaria brassicicola Abra43 Elodie Belmas,Martial Briand,Anthony Kwasiborski,Justine Colou,Guillaume Nguyenet al. Genome Announcements, 2018, 6 (6), pp.e01559-17. ⟨10.1128/genomeA.01559-17⟩ Article dans une revue hal-02516580v1
Commentary: seed bacterial inhabitants and their routes of colonization Carolina Escobar Rodríguez,Birgit Mitter,Matthieu Barret,Angela Sessitsch,Stéphane Compant Plant and Soil, 2018, 422 (1-2), pp.129-134. ⟨10.1007/s11104-017-3368-9⟩ Article dans une revue hal-02516685v1
Functional Microbial Features Driving Community Assembly During Seed Germination and Emergence Gloria Torres-Cortés,Sophie Bonneau,Olivier Bouchez,Clémence Genthon,Martial Briandet al. Frontiers in Plant Science, 2018, 9, pp.902. ⟨10.3389/fpls.2018.00902⟩ Article dans une revue hal-02516666v1
Ancestral acquisitions, gene flow and multiple evolutionary trajectories of the type three secretion system and effectors in Xanthomonas plant pathogens Déborah Merda,Martial Briand,Eran Bosis,Céline Rousseau,Perrine Portieret al. Molecular Ecology, 2017, 26 (21), pp.1-14. ⟨10.1111/mec.14343⟩ Article dans une revue hal-01904571v1
Niches and routes of transmission of Xanthomonas citri pv. fuscans to bean seeds Armelle Darrasse,Matthieu Barret,Sophie Cesbron,Stéphane Compant,Marie-Agnès Jacques Plant and Soil, 2017, 422 (1-2), pp.115-128. ⟨10.1007/s11104-017-3329-3⟩ Article dans une revue hal-05056275v1
Bacterial and fungal communities vary with the type of organic substrate: implications for biocontrol of soilless crops Virginie Montagne,Hervé Capiaux,Matthieu Barret,Patrice Cannavo,Sylvain Charpentieret al. Environmental Chemistry Letters, 2017, 15 (3), pp.537-545. ⟨10.1007/s10311-017-0628-0⟩ Article dans une revue hal-01524498v1
Ecological patterns of seed microbiome diversity, transmission, and assembly Ashley Shade,Marie-Agnès Jacques,Matthieu Barret Current Opinion in Microbiology, 2017, 37, pp.15-22. ⟨10.1016/j.mib.2017.03.010⟩ Article dans une revue (article de synthèse) hal-02516692v1
Differences in stability of seed-associated microbial assemblages in response to invasion by phytopathogenic microorganisms Samir Rezki,Claire Campion,Béatrice Iacomi-Vasilescu,Anne Préveaux,Youness Toualbiaet al. PeerJ, 2016, 4, pp.e1923. ⟨10.7717/peerj.1923⟩ Article dans une revue hal-01392639v1
Characterization of relative abundance of lactic acid bacteria species in French organic sourdough by cultural, qPCR and MiSeq high-throughput sequencing methods Elisa Michel,Clarisse Monfort,Marion Deffrasnes,Stéphane Guezenec,Emilie Lhommeet al. International Journal of Food Microbiology, 2016, 239, pp.35-43. ⟨10.1016/j.ijfoodmicro.2016.07.034⟩ Article dans une revue hal-01527569v1
Answer to Ling et al “Predictive roles of gut dysbiosis on the severity of NAFLD” Jérôme Boursier,Matthieu Barret,Anna Mae Diehl Hepatology, 2016, 64 (3), pp.994-995. ⟨10.1002/hep.28562⟩ Article dans une revue hal-02632028v1
Plant microbiota affects seed transmission of phytopathogenic microorganisms Matthieu Barret,Jean-François Guimbaud,Armelle Darrasse,Marie Agnes Jacques Molecular Plant Pathology, 2016, 17 (6), pp.791-795. ⟨10.1111/mpp.12382⟩ Article dans une revue hal-01353543v1
The severity of nonalcoholic fatty liver disease is associated with gut dysbiosis and shift in the metabolic function of the gut microbiota Matthieu Barret,Mariana Machado,Lionel Fizanne,Felix Araujo-Perez,Cynthia Guyet al. Hepatology, 2016, 63 (3), pp.764-75. ⟨10.1002/hep.28356⟩ Article dans une revue hal-02516681v1
Terroir is a key driver of seed-associated microbial assemblages Stéphanie Klaedtke,Marie Agnes Jacques,Lorenzo Raggi,Anne Preveaux,Sophie Bonneauet al. Environmental Microbiology, 2016, 18 (6), pp.1792-1804. ⟨10.1111/1462-2920.12977⟩ Article dans une revue hal-01455975v1
Emergence Shapes the Structure of the Seed Microbiota Matthieu Barret,Martial Briand,Sophie Bonneau,Anne Préveaux,Sophie Valièreet al. Applied and Environmental Microbiology, 2015, 81 (4), pp.1257-1266. ⟨10.1128/AEM.03722-14⟩ Article dans une revue hal-01153480v1
Pairwise transcriptomic analysis of the interactions between the ectomycorrhizal fungus laccaria bicolor S238N and three beneficial, neutral and antagonistic soil bacteria Aurélie Deveau,Matthieu Barret,Abdala Gamby Diedhiou,Johan Leveau,Wietse de Boeret al. Microbial ecology, 2015, 69 (1), pp.146-159. ⟨10.1007/s00248-014-0445-y⟩ Article dans une revue hal-01208788v1
The SPI-1-like Type III secretion system: more roles than you think Frank Egan,Matthieu Barret,Fergal O'Gara Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00034⟩ Article dans une revue hal-01210004v1
Identification of novel phytase genes from an agricultural soil-derived metagenome. Hao Tan,Marlies J Mooij,Matthieu Barret,Pardraig M Hegarty,Catriona Haringtonet al. World Journal of Microbiology and Biotechnology, 2014, 24 (1), pp.113-8. ⟨10.4014/jmb.1307.07007⟩ Article dans une revue hal-02639216v1
Genome sequence reveals that &lt;em&gt;Pseudomonas fluorescens&lt;/em&gt; F113 possesses a large and diverse array of systems for rhizosphere function and host interaction Miguel Redondo-Nieto,Matthieu Barret,John Morrissey,Kieran Germaine,Francisco Martínez-Graneroet al. BMC Genomics, 2013, 14 (1), pp.1-17. ⟨10.1186/1471-2164-14-54⟩ Article dans une revue hal-02650368v1
Molecular evolution of LysR-type transcriptional regulation in Pseudomonas aeruginosa F. Jerry Reen,Matthieu Barret,Emilie Fargier,Marcus O’muinneacháin,Fergal O’gara Molecular Phylogenetics and Evolution, 2013, 66 (3), pp.1041-1049. ⟨10.1016/j.ympev.2012.12.014⟩ Article dans une revue hal-02649223v1
Genomic analysis of the biocontrol strain Pseudomonas fluorescens Pf29Arp with evidence of T3SS and T6SS gene expression on plant roots Muriel Marchi,Morgane Boutin,Kévin Gazengel,Claude Rispe,Jean-Pierre Gauthieret al. Environmental Microbiology Reports, 2013, 5 (3), pp.393 - 403. ⟨10.1111/1758-2229.12048⟩ Article dans une revue istex hal-01208629v1
Long-term phosphorus fertilisation increased the diversity of the total bacterial community and the phoD phosphorus mineraliser group in pasture soils Hao Tan,Matthieu Barret,Marlies J. Mooij,Olivia Rice,John P. Morrisseyet al. Biology and Fertility of Soils, 2013, 49 (6), pp.661-672. ⟨10.1007/s00374-012-0755-5⟩ Article dans une revue hal-02653047v1
Characterization of the SPI-1 and Rsp type three secretion systems inPseudomonas fluorescens F113 Matthieu Barret,Frank Egan,Jennifer Moynihan,John P. Morrissey,Olivier Lesouhaitieret al. Environmental Microbiology Reports, 2013, 5 (3), pp.377-386. ⟨10.1111/1758-2229.12039⟩ Article dans une revue hal-02644403v1
Distribution and diversity of bacterial secretion systems across metagenomic datasets. Matthieu Barret,Frank Egan,Fergal O'Gara Environmental Microbiology Reports, 2013, 5 (1), pp.117-26. ⟨10.1111/j.1758-2229.2012.00394.x⟩ Article dans une revue hal-02653049v1
Subtilomycin: A New Lantibiotic from Bacillus subtilis Strain MMA7 Isolated from the Marine Sponge Haliclona simulans Robert Phelan,Matthieu Barret,Paul Cotter,Paula O'Connor,Rui Chenet al. Marine drugs, 2013, 11 (6), pp.1878-1898. ⟨10.3390/md11061878⟩ Article dans une revue hal-02651130v1
Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113 M. Redondo-Nieto,Matthieu Barret,J. P. Morrisey,K. Germaine,F. Martinez-Graneroet al. Journal of Bacteriology, 2012, 194 (5), pp.1273-1274. ⟨10.1128/JB.06601-11⟩ Article dans une revue hal-02652031v1
Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered Matthieu Barret,F. Egan,E. Fargier,J. P. Morrissey,F. O'Gara Microbiology, 2011, 157 (6), pp.1726-1739. ⟨10.1099/mic.0.048645-0⟩ Article dans une revue hal-02650365v1
Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence Matthieu Barret,John P. Morrissey,Fergal O’gara Biology and Fertility of Soils, 2011, 47 (7), pp.729-743. ⟨10.1007/s00374-011-0605-x⟩ Article dans une revue istex hal-02650050v1
Bacterial-fungal Interactions: hyphens between agricultural, clinical, environmental, and food microbiologists Pascale P. Frey-Klett,Peter Burlinson,Aurélie Deveau,Matthieu Barret,M. Tarkkaet al. Microbiology and Molecular Biology Reviews, 2011, 75 (4), pp.583 - +. ⟨10.1128/MMBR.00020-11⟩ Article dans une revue hal-02651157v1
Computational prediction of the Crc regulon identifies genus-wide and species-specific targets of catabolite repression control in Pseudomonas bacteria Thomas Browne,Matthieu Barret,Fergal O'Gara,John P Morrissey BMC Microbiology, 2010, 10 (1), pp.1-12. ⟨10.1186/1471-2180-10-300⟩ Article dans une revue hal-02656830v1
Effect of wheat roots infected with the pathogenic &lt;em&gt;fungus gaeumannomyces graminis&lt;/em&gt; var. tritici on gene expression of the biocontrol bacterium pseudomonas fluorescens Pf29Arp Matthieu Barret,Pascale P. Frey-Klett,Anne-Yvonne Guillerm-Erckelboudt,Morgane Boutin,Grégory Guernecet al. Molecular Plant-Microbe Interactions, 2009, 22 (12), pp.1611-1623. ⟨10.1094/MPMI-22-12-1611⟩ Article dans une revue hal-02663862v1
The plant pathogenic fungus Gaeumannomyces graminis var. tritici improves bacterial growth and triggers early gene regulations in the biocontrol strain Pseudomonas fluorescens Pf29Arp Matthieu Barret,P. Frey-Klett,M. Boutin,Anne-Yvonne Guillerm-Erckelboudt,Frédérique Martinet al. New Phytologist, 2009, 181 (2), pp.435-447. ⟨10.1111/j.1469-8137.2008.02675.x⟩ Article dans une revue inria-00359115v1
Bactéries et champignons interagissent pour la santé des plantes Alain A. Sarniguet,Matthieu Barret,Lionel Lebreton,Stéphanie Daval Biofutur, 2008, 284, pp.30-33 Article dans une revue hal-02664697v1

Ouvrages (2)

Extended Biocontrol Xavier Fauvergue,Adrien Rusch,Matthieu Barret,Marc Bardin,Emmanuelle Jacquin-Jolyet al. Springer Dordrecht; Editions Quae, 327 p., 2022, 978-94-024-2150-7 Ouvrages (ouvrage de synthèse) hal-03695954v1
Biocontrôle Xavier Fauvergue,Adrien Rusch,Matthieu Barret,Marc Bardin,Emmanuelle Jacquin-Jolyet al. Editions Quae, 376 p., 2020, Savoir Faire (Quae), 978-2-7592-3076-1 Ouvrages (ouvrage de synthèse) hal-02791036v1

Chapitre d'ouvrage (6)

Plant Microbiota: Diversity, Transmission and Function Matthieu Barret,Marc Buée,Christophe Mougel,Corinne Vacher Extended Biocontrol, Springer Netherlands, pp.111-117, 2022, ⟨10.1007/978-94-024-2150-7_9⟩ Chapitre d'ouvrage hal-04059155v1
Le microbiote des plantes : diversité, transmission et fonction Matthieu Barret,Marc Buée,Christophe Mougel,Corinne Vacher Biocontrôle. Éléments pour une protection agroécologique des cultures., Editions Quae, 2020, Savoir Faire, 978-2-7592-3076-1 Chapitre d'ouvrage hal-03319624v1
Interactions plantes/micro-organismes dans la rhizosphère Philippe Lemanceau,Matthieu Barret,Manuel Blouin,Sylvie Mazurier,Barbara Pivato Les sols au coeur de la zone critique 6, écologie, ISTE, 2018, ISBN : 9781784053840 (papier) ISBN : 9781784063849 (ebook) Chapitre d'ouvrage hal-02786073v1
Plant/micro-organism interactions in the rhizosphere. Chap 4 Philippe Lemanceau,Matthieu Barret,Manuel Blouin,Sylvie Mazurier,Barbara Pivato Soils as a Key Component of the Critical Zone vol 6 Geosciences Series – Soils Set, ISTE Ltd and John Wiley & Sons, 2018, 978-1-119-57311-1 Chapitre d'ouvrage hal-02786890v1
Plant communication with associated microbiota in the spermosphere, rhizosphere and phyllosphere Philippe P. Lemanceau,Matthieu Barret,Sylvie Mazurier,Samuel Mondy,Barbara Pivatoet al. How plants communicate with their biotic environment, 82, Academic Press - Elsevier, 2017, Advances in Botanical Research, 978-0-12-801431-8. ⟨10.1016/bs.abr.2016.10.007⟩ Chapitre d'ouvrage hal-01608302v1
Combined effects of wheat roots and pathogenic fungus Gaeumannomyces graminis var tritici on Gene Expression of the biocontrol bacterium Pseudomonas fluorescens Pf29Arp Matthieu Barret,Pascale Frey-Klett,Anne-Yvonne Guillerm-Erckelboudt,Morgane Boutin,Grégory Guernecet al. Molecular Microbial Ecology of the Rhizosphere: Volume 1 & 2, Wiley, 2013, 978-1-118-29617-2. ⟨10.1002/9781118297674.ch61⟩ Chapitre d'ouvrage hal-02803298v1

Thèse (1)

Analyse différentielle du transcriptome de la rhizobactérie Pseudomonas fluorescens Pf29Arp lors d'intercations avec le champignon pathogène du blé Gaeumannomyces graminis var. tritici Matthieu Barret Sciences du Vivant [q-bio]. AGROCAMPUS OUEST, 2009. Français. ⟨NNT : ⟩ Thèse tel-02818996v1