Marta Avalos

Publications

Article dans une revue (33)

Harnessing Moderate-Sized Language Models for Reliable Patient Data De-identification in Emergency Department Records: An Evaluation of Strategies and Performance Océane Dorémus,Dylan Russon,Benjamin Contrand,Ariel Guerra-Adames,Marta Avalos-Fernandezet al. JMIR AI, 2025, 4, pp.e57828. ⟨10.2196/57828⟩ Article dans une revue hal-04489355v2
Uncovering Judgment Biases in Emergency Triage: A Public Health Approach Based on Large Language Models Ariel Guerra Adames,Marta Avalos,Océane Dorémus,Cédric Gil-Jardiné,Emmanuel Lagarde Proceedings of Machine Learning Research, 2025, 259, pp.420-439 Article dans une revue hal-04846735v1
CRP under 130 mg/L rules out the diagnosis of Legionella pneumophila serogroup 1 (URINELLA Study) Timothée Klopfenstein,Souheil Zayet,Samantha Poloni,Vincent Gendrin,Damien Fournieret al. European Journal of Clinical Microbiology and Infectious Diseases, 2024, ⟨10.1007/s10096-024-04814-x⟩ Article dans une revue hal-04522802v1
Deep Learning Transformer Models for Building a Comprehensive and Real-time Trauma Observatory: Development and Validation Study Gabrielle Chenais,Cédric Gil-Jardiné,Hélène Touchais,Marta Avalos Fernandez,Benjamin Contrandet al. JMIR AI, 2023, 2, pp.e40843. ⟨10.2196/40843⟩ Article dans une revue hal-03978442v1
The respiratory microbiota alpha-diversity in chronic lung diseases: first systematic review and meta-analysis Marta Avalos,Clémence Métayer,Thibaud Alin,Rodolphe Thiébaut,Raphaël Enaudet al. Respiratory Research, 2022, 23 (214), ⟨10.1186/s12931-022-02132-4⟩ Article dans une revue hal-03762542v1
Health conditions and the risk of home injury in French adults: results from a prospective study of the MAVIE cohort Madelyn Yiseth Rojas Castro,Marta Avalos,Benjamin Contrand,Marion Dupuy,Catherine Sztal-Kutaset al. Injury Prevention, 2022, 28 (2), pp.6. ⟨10.1136/injuryprev-2020-044033⟩ Article dans une revue hal-03481699v2
A web-based prospective cohort study of home, leisure, school and sports injuries in France: a descriptive analysis Madelyn Yiseth Rojas Castro,Ludivine Orriols,Dunia Basha Sakr,Benjamin Contrand,Marion Dupuyet al. Injury Epidemiology, 2021, 8 (1), ⟨10.1186/s40621-021-00343-9⟩ Article dans une revue hal-03313585v1
New Insights in Microbial Species Predicting Lung Function Decline in CF: Lessons from the MucoFong Project Florence Francis,Raphael Enaud,Perrine Soret,Florian Lussac-Sorton,Marta Avaloset al. Journal of Clinical Medicine, 2021, 10 (16), pp.3725. ⟨10.3390/jcm10163725⟩ Article dans une revue hal-03328143v1
Cohort profile: MAVIE a web-based prospective cohort study of home, leisure, and sports injuries in France Madelyn Yiseth Rojas Castro,Ludivine Orriols,Benjamin Contrand,Marion Dupuy,Catherine Sztal-Kutaset al. PLoS ONE, 2021, 16 (3), pp.e0248162. ⟨10.1371/journal.pone.0248162⟩ Article dans une revue hal-03241349v1
Respiratory mycobiome and suggestion of inter-kingdom network during acute pulmonary exacerbation in cystic fibrosis Perrine Soret,Louise-Eva Vandenborght,Florence Francis,Noémie Coron,Raphaël Enaudet al. Scientific Reports, 2020, 10 (1), pp.3589. ⟨10.1038/s41598-020-60015-4⟩ Article dans une revue inserm-02497484v1
Penalized logistic regression with low prevalence exposures beyond high dimensional settings Sam Doerken,Marta Fernandez Avalos,Emmanuel Lagarde,Martin Schumacher PLoS ONE, 2019, 14 (5), pp.e0217057. ⟨10.1371/journal.pone.0217057⟩ Article dans une revue hal-02140472v1
Elite Swimmers’ Training Patterns in the 25 Weeks Prior to Their Season’s Best Performance: Insights Into Periodization From a 20-Years Cohort Philippe Hellard,Marta Fernandez Avalos,Gaëlle Lefort,Robin Pla,Iñigo Mujikaet al. Frontiers in Physiology, 2019, 10, ⟨10.3389/fphys.2019.00363⟩ Article dans une revue hal-02095063v1
SEIS: Insight’s Seismic Experiment for Internal Structure of Mars P. Lognonné,W. Banerdt,D. Giardini,W. Pike,U. Christensenet al. Space Science Reviews, 2019, 215 (1), ⟨10.1007/s11214-018-0574-6⟩ Article dans une revue hal-02188213v2
Health administrative data enrichment using cohort information: Comparative evaluation of methods by simulation and application to real data Bernard Silenou,Marta Fernandez Avalos,Catherine Helmer,Claudine Berr,Antoine Parienteet al. PLoS ONE, 2019, 14 (1), pp.e0211118. ⟨10.1371/journal.pone.0211118⟩ Article dans une revue hal-02008499v1
Lasso regularization for left-censored Gaussian outcome and high-dimensional predictors Perrine Soret,Marta Fernandez Avalos,Linda Wittkop,Daniel Commenges,Rodolphe Thiébaut BMC Medical Research Methodology, 2018, 18, pp.13. ⟨10.1186/s12874-018-0609-4⟩ Article dans une revue hal-03160825v2
Modelling of optimal training load patterns during the 11 weeks preceding major competition in elite swimmers Philippe Hellard,Charlotte Scordia,Marta Fernandez Avalos,Iñigo Mujika,Pyne David Applied Physiology, Nutrition, and Metabolism, 2017, 42 (10), pp.1106-1117. ⟨10.1139/apnm-2017-0180⟩ Article dans une revue hal-01577936v1
Prescription medicine use by pedestrians and the risk of injurious road traffic crashes: A case-crossover study Née Mélanie,Marta Fernandez Avalos,Audrey Luxcey,Benjamin Contrand,L Rachid Salmiet al. PLoS Medicine, 2017, pp.1-19. ⟨10.1371/journal.pmed.1002347⟩ Article dans une revue hal-01577941v1
Training-Related Risk of Common Illnesses in Elite Swimmers over a Four-Year Period Philippe Hellard,Marta Avalos,Fanny Guimaraes,Jean-François Toussaint,Pyne David Medicine and Science in Sports and Exercise, 2015, 47 (4), pp.698-707. ⟨10.1249/MSS.0000000000000461⟩ Article dans une revue hal-01099379v1
Sparse conditional logistic regression for analyzing large-scale matched data from epidemiological studies: a simple algorithm Marta Avalos,Hélène Pouyes,Yves Grandvalet,Ludivine Orriols,Emmanuel Lagarde BMC Bioinformatics, 2015, 16 (Suppl 6), pp.S1. ⟨10.1186/1471-2105-16-S6-S1⟩ Article dans une revue hal-01217312v1
Long-term chronic diseases and crash responsibility: a record linkage study Ludivine Orriols,Marta Avalos,Nicholas Moore,Pierre Philip,Bernard Delormeet al. Accident Analysis & Prevention, 2014, 71, pp.137-43. ⟨10.1016/j.aap.2014.05.001⟩ Article dans une revue istex hal-01099306v1
Variable selection on large case-crossover data: application to a registry-based study of prescription drugs and road traffic crashes. Marta Avalos,Ludivine Orriols,Hélène Pouyes,Yves Grandvalet,Frantz Thiessardet al. Pharmacoepidemiology and Drug Safety, 2014, pp.140-51. ⟨10.1002/pds.3539⟩ Article dans une revue istex hal-01099301v1
Identifying Optimal Overload and Taper in Elite Swimmers over Time Philippe Hellard,Marta Fernandez Avalos,Christophe Hausswirth,Pyne David,Jean-François Toussaintet al. Journal of Sports Science and Medicine, 2013 Article dans une revue hal-01578223v1
Analysis of multiple exposures in the case-crossover design via sparse conditional likelihood Marta Avalos,Yves Grandvalet,N. Duran Adroher,Ludivine Orriols,Emmanuel Lagarde Statistics in Medicine, 2012, 31 (21), pp.2290-2302. ⟨10.1002/sim.5344⟩ Article dans une revue istex hal-00742310v1
3D kinematic and dynamic analysis of the front crawl tumble turn in elite male swimmers Frédéric Puel,J. Morlier,Marta Avalos,M. Mesnard,M. Cidet al. Journal of Biomechanics, 2012, 45 (3), pp.510-515. ⟨10.1016/j.jbiomech.2011.11.043⟩ Article dans une revue hal-01727368v1
Prescription-Drug-Related Risk in Driving: Comparing Conventional and Lasso Shrinkage Logistic Regressions Marta Avalos,N. Duran Adroher,Emmanuel Lagarde,Frantz Thiessard,Yves Grandvaletet al. Epidemiology, 2012, 23 (5), pp.706-712. ⟨10.1097/EDE.0b013e31825fa528⟩ Article dans une revue hal-00742317v1
Modeling the association between HR variability and illness in elite swimmers. Philippe Hellard,Fanny Guimaraes,Marta Avalos,Nicolas Houel,Christophe Hausswirthet al. Medicine and Science in Sports and Exercise, 2011, 43 (6), pp.1063-70. ⟨10.1249/MSS.0b013e318204de1c⟩ Article dans une revue inserm-00541526v1
Kinematic measures and stroke rate variability in elite female 200-m swimmers in the four swimming techniques: Athens 2004 Olympic semi-finalists and French National 2004 Championship semi-finalists. Philippe Hellard,Jeanne Dekerle,Marta Avalos,Nicolas Caudal,Michel Knoppet al. Journal of Sports Sciences, 2008, 26 (1), pp.35-46. ⟨10.1080/02640410701332515⟩ Article dans une revue inserm-00149830v1
Parsimonious Additive Models Marta Avalos,Yves Grandvalet,Christophe Ambroise Computational Statistics and Data Analysis, 2007, 51 (6), pp.2851-2870. ⟨10.1016/j.csda.2006.10.007⟩ Article dans une revue inserm-00149798v1
Assessing the limitations of the Banister model in monitoring training. Philippe Null Hellard,Marta Avalos,Lucien Lacoste,Frédéric Barale,Jean-Claude Chatardet al. Journal of Sports Sciences, 2006, 24 (5), pp.509-20. ⟨10.1080/02640410500244697⟩ Article dans une revue inserm-00149782v1
Discrimination par modèles additifs parcimonieux Marta Avalos,Yves Grandvalet,Christophe Ambroise Revue dÍntelligence Artificielle, 2005, 19 (4-5), pp.661-682 Article dans une revue inserm-00149790v1
Modeling the residual effects and threshold saturation of training: a case study of Olympic swimmers. Philippe Null Hellard,Marta Avalos,Grégoire P. Millet,Lucien Lacoste,Frédéric Baraleet al. Journal of Strength and Conditioning Research, 2005, 19 (1), pp.67-75. ⟨10.1519/14853.1⟩ Article dans une revue inserm-00149779v1
Modeling the training-performance relationship using a mixed model in elite swimmers. Marta Avalos,Philippe Null Hellard,Jean-Claude Chatard Medicine and Science in Sports and Exercise, 2003, 35 (5), pp.838-46. ⟨10.1249/01.MSS.0000065004.05033.42⟩ Article dans une revue inserm-00149768v1
Training Analysis and the Modelling of Relations between Training Volumes and Performance: Interpretation of Results in Light of the New Paradigms of Complexity Philippe Null Hellard,Léo Gerville-Réache,C Fauquet,Marta Fernandez Avalos,A Menaud Journal of Human Movement Studies, 2002, 42 (1), pp.53-90 Article dans une revue hal-01355242v1

Communication dans un congrès (63)

Balancing Predictive Performance and Explainability for Integrating Clinical, Biological, and Radiological Data in the Basque Country COVID-19 Cohort Lander Rodriguez-Idiazabal,Marta Avalos,Dylan Russon,Irantzu Barrio,Jose M. Quintana-Lopez ISI 2025 - 65th ISI World Statistics Congress, International Statistical Institute, Oct 2025, Hague, Netherlands Communication dans un congrès hal-05385401v1
Génération de données de santé synthétiques : état de l'art en vue de la classification des mécanismes des traumatismes Ariel Guerra-Adames,Océane Dorémus,Marta Avalos,Vianney Jouhet,Emmanuel Lagardeet al. RJCIA 2025 - Rencontres des Jeunes Chercheurs en Intelligence Artificielle - Plate-Forme Intelligence Artificielle (PFIA), AFIA - LIB - Université Bourgogne Europe, Jun 2025, Dijon, France Communication dans un congrès hal-05334934v1
Machine Learning for Compositional Microbiome Data to Predict a Clinical Outcome: Are Interpretable Methods Up to the Task? Céline Hosteins,Marta Avalos,Diego Kauer,Cristian Meza,Laurence Delhaeset al. ICPRS 2025 - IEEE 15th International Conference on Pattern Recognition Systems, IAPR and the IEEE Chile Section, University Adolfo Ibáñez (Viña del Mar, Chile) and the Chilean Association for Pattern Recognition, Dec 2025, Viña del Mar, Chile. ⟨10.1109/ICPRS66293.2025.11302842⟩ Communication dans un congrès hal-05377246v1
Données médicales synthétiques : État de l'art et enjeux de la génération automatique de données tabulaires et textuelles Ariel Guerra Adames,Océane Dorémus,Marta Avalos,Emmanuelle Lagarde,Vianney Jouhetet al. Dataquitaine 2025, Mar 2025, Talence, France Communication dans un congrès hal-05334979v1
Can mortality prediction be enhanced integrating patient clinical and medical imaging data? Lander Rodriguez-Idiazabal,Marta Avalos,Jose M. Quintana-Lopez,Irantzu Barrio CEB 2025 - XX Conferencia Española de Bioestadística, Sociedad Española de Bioestadística (SEB), Sep 2025, Elche, Spain Communication dans un congrès hal-05372878v1
Mixed effects models for longitudinal compositional data using the SAEM algorithm: Application to identifying respiratory microbiome-based predictive John Barrera,Cristian Meza,Marta Avalos,Céline Hosteins,Susana Eyheramendyet al. ISI 2025 - 65th ISI World Statistics Congress, International Statistical Institute, Oct 2025, Hague, Netherlands Communication dans un congrès hal-05402381v1
Predicting Response to Cystic Fibrosis Modulators from Compositional Microbiome Data: A Comparison of Adapted Machine Learning Approaches Céline Hosteins,Marta Avalos,Diego Kauer,Laurence Delhaes,Raphaël Enaud CIBB 2025 - 20th conference on Computational Intelligence methods for Bioinformatics and Biostatistics, Data Science for Bioinformatics Lab, Politecnico de Milano, Italy, Sep 2025, Milan, Italy Communication dans un congrès hal-05401017v1
Indoor Microbiome in Asthma: A Differential Abundance Framework Accounting for Zero-Inflation, Compositionality, Spatial Clustering, and Covariate Adjustment Marta Avalos,John Barrera,Cristian Meza,Susana Eyheramendy,Raphaël Enaudet al. CIBB 2025 - 20th conference on Computational Intelligence methods for Bioinformatics and Biostatistics, Data Science for Bioinformatics Lab, Politecnico de Milano, Italy, Sep 2025, Milan, Italy Communication dans un congrès hal-05377271v1
Synthetic medical data generation: state of the art and application to trauma mechanism classification Océane Doremus,Ariel Guerra-Adames,Marta Avalos-Fernandez,Vianney Jouhet,Cédric Gil-Jardinéet al. CIBB 2025 - International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics, Data Science for Bioinformatics Lab - Department of Electronics, Information and Bioengineering Politecnico di Milano, Sep 2025, Milan, Italy Communication dans un congrès hal-05334858v1
Detecting Human Bias in Emergency Triage Using LLMs: Literature Review, Preliminary Study, and Experimental Plan Marta Avalos,Dalia Cohen,Dylan Russon,Melissa Davids,Océane Dorémuset al. FLAIRS 2024 - 37th International Florida Artificial Intelligence Research Society Conference, The Florida Artificial Intelligence Research Society, May 2024, Miramar Beach, United States. pp.6 Communication dans un congrès hal-04575557v1
A Biostatistician in the Era of a Paradigm Shift Towards Data Science in Epidemiology Marta Avalos 1st SMILE Workshop on Statistical Modeling, Nonparametric Inference, and Model Selection for Complex Data, Lisandro Fermin; Cristian Meza, Aug 2024, Valparaiso, Chile Communication dans un congrès hal-04880198v1
Transmettre l'art de faire équipe à nos étudiants en Santé Publique : Retour d'expérience sur l'alignement pédagogique Marta Avalos,Valérie Kiewsky,Mélanie Plazy,Elise Verpillot,Erika Hierholzer ETES 2024 - Enseigner les Transitions Écologiques et Sociales dans le Supérieur, 1point5, Jul 2024, Pessac, France Communication dans un congrès hal-04644137v1
Challenges of Microbiome Data Analysis in Chronic Respiratory Disease Studies: Examples from Three French Studies Marta Avalos,John Barrera,Cristian Meza,Susana Eyheramendy,Louise-Eva Vandenborghtet al. ICSDS 2024 - International Conference on Statistics and Data Science, Institute of Mathematical Statistics (IMS), Dec 2024, Nice, France Communication dans un congrès hal-04846596v1
Réflexions pour la conception d'un protocole expérimental de détection des biais dans le triage d'urgence hospitalière à l'aide de modèles de langage Ariel Guerra-Adames,Marta Avalos,Dalia Cohen,Dylan Russon,Melissa Davidset al. EvalLLM2024 - Atelier sur l'évaluation des modèles génératifs (LLM) et challence d'extraction d'information few-shot, AMIAD, Jul 2024, Toulouse, France Communication dans un congrès hal-04678043v1
Optimisation des services des urgences hospitalières à l'aide de l'IA : une opportunité incontournable et un risque de systématisation des disparités de santé Ariel Guerra-Adames,Marta Avalos,Emmanuel Lagarde Dataquitaine 2024, Mar 2024, Talence (33), France Communication dans un congrès hal-04546590v1
Interdisciplinary and differentiated learning of Statistics in an online MPH Marta Avalos,Gaëlle Coureau IASE 2023 - The 13th IASE Satellite Conference, The International Association for Statistical Education (IASE) and the International Association for Statistical Computing (IASC), Jul 2023, Toronto, Canada Communication dans un congrès hal-04173057v1
Serious Games for Training in Patient Flow Management in Emergency Departments: State of the Art and Perspectives Charlotte Blot,Katia Weickert,Arthur Payros,Marta Avalos,Cédric Gil-Jardiné FLAIRS 36 - 36th International Florida Artificial Intelligence Research Society Conference, The Florida Artificial Intelligence Research Society, May 2023, Clearwater Beach, FL., United States. pp.3, ⟨10.32473/flairs.36.133276⟩ Communication dans un congrès hal-04098447v1
Public Health surveillance from emergency call center data: visualization dashboard and NLP of call reports Alexandre Naprous,Marta Avalos,Catherine Pradeau,Emmanuel Lagarde,Cédric Gil-Jardine FLAIRS-35 - 35th International Florida Artificial Intelligence Research Society Conference, May 2022, Hutchinson, Florida, United States. ⟨10.32473/flairs.v35i.130712⟩ Communication dans un congrès hal-03682871v1
Les données du SAMU comme moyen de surveillance de la santé de la population Alexandre Naprous,Marta Avalos,Catherine Pradeau,Emmanuel Lagarde,Cédric Gil-Jardine Dataquitaine 2022 - 5e Journée Dataquitaine, Feb 2022, Talence / Virtuel, France Communication dans un congrès hal-03691034v1
Organisational learning strategies of introductory statistics courses in an online MPH: slow and steady wins the race Marta Avalos,Samia Mehouachi ICOTS 2022 - 11th International Conference on Teaching Statistics, IASE (International Association for Statistical Education) and ISI (International Statistical Institute), Sep 2022, Rosario, Argentina Communication dans un congrès hal-03872624v1
Performance en classification de données textuelles des passages aux urgences des modèles BERT pour le français Gabrielle Chenais,Hélène Touchais,Marta Avalos,Loïck Bourdois,Philippe Revelet al. PFIA 2021 - Journée Santé et I.A., Journée organisée avec le soutien de l’Association française d’Informatique Médicale (AIM) et le Collège Science de l’Ingénierie des Connaissances de l’AFIA dans le cadre de la Plate-Forme Intelligence Artificielle (PFIA), Jun 2021, Bordeaux / Virtual, France Communication dans un congrès hal-03276129v1
Una herramienta de toma de decisiones para ajustar los niveles anormales en las pruebas de conteo sanguíneo completo Marta Avalos,Hélène Touchais,Marcela Henríquez-Henríquez Workshop en REDES Biomatemáticas, Oct 2021, Valparaiso/Virtual, Chile Communication dans un congrès hal-03482036v1
Traitement automatique des résumés de passages aux urgences : focus sur la désidentification Loïck Bourdois,Marta Avalos,Gabrielle Chenais,Benjamin Contrand,Cédric Gil-Jardinéet al. PFIA 2021 - Santé et I.A., Journée organisée avec le soutien de l’Association française d’Informatique Médicale (AIM) et le Collège Science de l’Ingénierie des Connaissances de l’AFIA dans le cadre de la Plate-Forme Intelligence Artificielle (PFIA), Jun 2021, Bordeaux / Virtual, France Communication dans un congrès hal-03276124v1
Optimising criteria for manual smear review following automated blood count analysis: A machine learning approach Marta Avalos,Hélène Touchais,Marcela Henríquez-Henríquez WICT 2020 - 10th World Congress on Information and Communication Technologies, Dec 2020, Virtual, United Kingdom Communication dans un congrès hal-03133078v1
A decision-making tool to fine-tune abnormal levels in the complete blood count tests Marta Avalos,Hélène Touchais,Marcela Henríquez-Henríquez ML4H - Machine Learning for Health workshop at NeurIPS 2020, Dec 2020, Vancouver / Virtual, Canada Communication dans un congrès hal-03085426v1
Classification automatique du langage de données du service hospitalier des urgences Binbin Xu,Loïck Bourdois,Cédric Gil-Jardine,Eric Tellier,Frantz Thiessardet al. 3e Journée Dataquitaine : IA, RO et Data Science, Feb 2020, Talence, France Communication dans un congrès hal-02615327v1
MAVIE-Lab Sports: a mHealth for Injury Prevention and Risk Management in Sport Madelyn Rojas Castro,Marina Travanca,Marta Avalos Fernandez,David Valentin Conesa,Ludivine Orriolset al. DIGITAL HEALTH 2018 - 8th International Digital Health Conference, Apr 2018, Lyon, France Communication dans un congrès hal-01782964v1
Usefulness of Bayesian modeling in risk analysis and prevention of Home Leisure and Sport Injuries (HLIs) Madelyn Rojas Castro,Marina Travanca,Marta Fernandez Avalos,David Valentin Conesa,Emmanuel Lagarde III Jornadas Científicas de Estudiantes de la Sociedad Española de Biometría, Jan 2018, Bilbao, Spain Communication dans un congrès hal-01964484v1
Mavie-lab sports: a mhealth for injury prevention and risk management in sport Madelyn Rojas Castro,Marina Travanca,Marta Avalos Fernandez,Ludivine Orriols,David Valentin Conesaet al. The 13th World Conference on Injury Prevention and Safety Promotion (Safety 2018), Nov 2018, Bangkok, Thailand Communication dans un congrès hal-01945586v1
Representation Learning of Compositional Data Marta Avalos Fernandez,Richard Nock,Cheng Soon Ong,Julien Rouar,Ke Sun NIPS 2018 - Thirty-second Conference on Neural Information Processing Systems, Dec 2018, Montréal, Canada Communication dans un congrès hal-01945508v1
High-dimensional compositional microbiota data: state-of-the-art of methods and software implementations Perrine Soret,Marta Fernandez Avalos,Soon Cheng,Rodolphe Thiebaut 2017 - GDR « Statistiques et santé », Oct 2017, Bordeaux, France Communication dans un congrès hal-01667295v1
Adjustment for Unobserved Confounders in Health Administrative Databases Bernard Silenou Chawo,Marta Fernandez Avalos,Antoine Pariente,Hélène Jacqmin-Gadda 32nd International Conference on Pharmacoepidemiology & Therapeutic Risk Management, INTERNATIONAL SOCIETY FOR PHARMACOEPIDEMIOLOGY (ISPE), Aug 2016, Dublin, Ireland Communication dans un congrès hal-01396349v1
Clustering of temporal sport training curves: a comparison of FDA and LDA approaches Gaëlle Lefort,Marta Fernandez Avalos,Perrine Soret,Pyne David,Jean-François Toussaintet al. 23rd Australian Statistical Conference , Dec 2016, Canberra, Australia Communication dans un congrès hal-01396372v1
Exploring variable selection in additive mixed effects models using group lasso Marta Fernandez Avalos,Perrine Soret,Cristian Meza,Karine Bertin,Hao Renet al. 23rd Australian Statistical Conference, Statistical Society of Australia (SSA), Dec 2016, Canberra, Australia Communication dans un congrès hal-01396767v1
Estimateur de type Lasso pour modèle mixte non-paramétrique Perrine Soret,Cristian Meza,Marta Avalos,Karine Bertin 48èmes Journées de Statistique, Société Française de Statistique (SFdS), May 2016, Montpellier, France Communication dans un congrès hal-01396802v1
Lasso-type estimators for non-parametric mixed-effects models: application to high-dimensional data from a vaccine clinical trial for HIV Perrine Soret,Cristian Meza,Marta Fernandez Avalos,Karine Bertin,Rodolphe Thiébaut 3rd conference of the International Society for Non-Parametric Statistics (ISNPS), Jun 2016, Avignon, France Communication dans un congrès hal-01396378v1
A comparison of unsupervised curve classification methods for sport training data Gaëlle Lefort,Marta Fernandez Avalos,Perrine Soret,Pyne David,Jean-François Toussaintet al. 3rd conference of the International Society for Non-Parametric Statistics (ISNPS), The International Society for NonParametric Statistics (ISNPS), Jun 2016, Avignon, France Communication dans un congrès hal-01396366v1
Evolution of Teaching Strategies in a French ODL University Course Marta Fernandez Avalos,Mélanie Le Goff,Pierre Joly,Marthe-Aline Jutand,Ahmadou Alioum 9th Australian Conference on Teaching Statistics (OZCOTS), The International Association for Statistical Education (IASE), Dec 2016, Canberra, Australia. pp.183 Communication dans un congrès hal-01396772v1
Impact of unmeasured covariates on bias and statistical power in health administrative databases: a simulation study Mélanie Née,Marta Fernandez Avalos,Ludivine Orriols,Emmanuel Lagarde XVth Spanish Biometric Conference and the Vth Ibéro-American Biometric Meeting 2015, 2015, Bilbao, Spain Communication dans un congrès hal-01253141v1
Lasso pour données censurées à gauche : une comparaison par simulation d’algorithmes proposés dans la littérature Perrine Soret,Marta Fernandez Avalos,Linda Wittkop,Rodolphe Thiébaut,Daniel Commenges 47èmes Journées de la Statistique, SFdS, 2015, Lille, France Communication dans un congrès hal-01578293v1
Function selection in mixed models using L1-penalization Perrine Soret,Cristian Meza,Karine Bertin,Marta Fernandez Avalos,Philippe Null Hellard XVth Spanish Biometric Conference and the Vth Ibéro-American Biometric Meeting 2015, 2015, Bilbao, Spain Communication dans un congrès hal-01252267v1
Evolution des stratégies pédagogiques d'un DU Mélanie Le Goff,Marta Fernandez Avalos,Pierre Joly,Marthe-Aline Jutand Colloque Francophone International sur l'Enseignement de la Statistique – CFIES'2015, Jan 2015, Bordeaux, France Communication dans un congrès hal-01253156v1
High–Dimensional Sparse Matched Case–Control and Case–Crossover Data: A Review of Recent Works, Description of an R Tool and an Illustration of the Use in Epidemiological Studies Marta Avalos,Yves Grandvalet,Hélène Pouyes,Ludivine Orriols,Emmanuel Lagarde CIBB 2013 - 10th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, Jun 2013, Nice, France. pp.109-124 Communication dans un congrès hal-01099313v1
Prise en compte de la censure à gauche dans la modélisation de données de grande dimension Nastasia Fouret,Marta Avalos,Linda Wittkop,Rodolphe Thiebaut,Daniel Commenges 46e Journées de Statistique, Jun 2014, Rennes, France Communication dans un congrès hal-01099341v1
Données longitudinales en grande dimension : état des lieux des packages R Perrine Soret,Marta Avalos Troisièmes rencontres R, Jun 2014, Montpellier, France Communication dans un congrès hal-01099337v1
Etude de l’association entre consommation médicamenteuse et risque d’accident de la route : exploration par simulation de schémas d’études épidémiologiques applicables à partir des données médico-administratives Née Mélanie,Marta Avalos,Ludivine Orriols,Emmanuel Lagarde Journée Nationale Biopharmacie et Santé 2014, Nov 2014, Paris, France Communication dans un congrès hal-01099320v1
Ventilatory, metabolic and kinematic responses in sprint versus distance swimmers Philippe Hellard,Pierre-Marie Leprêtre,Marta Avalos,Ludovic Seifert,Jean-François Toussaintet al. XIIth International Symposium on Biomechanics and Medicine in Swimming, Apr 2014, Canberra, Australia Communication dans un congrès hal-01099378v1
Méthodes d’apprentissage statistique pour des données longitudinales : une revue systématique Perrine Soret,Marta Avalos GdR Statistique et Santé, Oct 2014, Toulouse, France Communication dans un congrès hal-01099331v1
Comparing methods for summarizing a training load in prediction models of swimming performance Charlotte Scordia,Marta Avalos,Philippe Hellard XIIth International Symposium on Biomechanics and Medicine in Swimming, Apr 2014, Canberra, Australia Communication dans un congrès hal-01099344v1
Analysis of a large registry-based study of prescription drugs and road traffic crashes Marta Fernandez Avalos,Ludivine Orriols ROeS 2013 - Seminar of the Austro-Swiss Region of the International Biometric Society, 2013, Dornbirn, Austria Communication dans un congrès hal-01578263v1
clogitLasso: an R package for high–dimensional analysis of matched case–control and case–crossover data Marta Fernandez Avalos,Yves Grandvalet,Hélène Pouyes,Ludivine Orriols,Emmanuel Lagarde CIBB & PRIB 2013, 2013, Nice, France Communication dans un congrès hal-01578291v1
clogitLasso: an R package for L1 penalized estimation of conditional logistic regression models Marta Avalos,Hélène Pouyes 1ères Rencontres R, Jul 2012, Bordeaux, France Communication dans un congrès hal-00717505v1
Assessing precision of lasso conditional logistic estimates in the case-crossover design Marta Avalos 3rd International Biometric Society channel network conference, Apr 2011, Bordeaux, France. pp.Abstracts of Oral contributed sessions. Page 2 Communication dans un congrès inserm-00585748v1
Modélisation des relations entre les charges d'entraînement et les pathologies infectieuses chez 28 nageurs élites durant 3 saisons Philippe Hellard,Fanny Guimaraes,Marta Avalos,Jean-François Toussaint 4ème Symposium de l'Irmes, Biarritz, 28 oct 2009, Oct 2009, Biarritz, France. pp.2 Communication dans un congrès inserm-00541753v1
Sélection de variables avec lasso dans la régression logistique conditionnelle Marta Avalos 41èmes Journées de Statistique, SFdS, Bordeaux, 2009, Bordeaux, France, France Communication dans un congrès inria-00386756v1
Modélisation des relations entre la variabilité de la fréquence cardiaque et les pathologies infectieuses chez 18 nageurs élites durant 3 saisons. Effets de la saison et du niveau de performance Philippe Hellard,Fanny Guimaraes,Marta Avalos,Jean-François Toussaint 4ème Symposium de l'Irmes, Biarritz, 28 oct 2009, Oct 2009, Biarritz, France. pp.1 Communication dans un congrès inserm-00541537v1
Model selection via the lasso in conditional logistic regression Marta Avalos Second International Biometric Society Channel Network Conference, Apr 2009, Ghent, Belgium. pp.Model selection and clustering session Communication dans un congrès inserm-00402434v1
Parsimonious additive logistic models Marta Avalos First Workshop of the ERCIM Working Group on Computing & Statistics, Jun 2008, Neuchâtel, Switzerland. page 56 Communication dans un congrès inserm-00402444v1
Pénalisation l1 pour les MAG Marta Avalos,Yves Grandvalet,Christophe Ambroise 2005, pp.25.1 Communication dans un congrès inserm-00149856v1
Model selection via penalization in the additive Cox model Marta Avalos,Yves Grandvalet,Christophe Ambroise The 3rd world conference on Computational Statistics & Data Analysis, 2005, Limassol, Cyprus. pp.45 Communication dans un congrès inserm-00149852v1
Penalized additive logistic regression for cardiovascular risk prediction Marta Avalos,Yves Grandvalet,Christophe Ambroise 2004, pp.301 Communication dans un congrès inserm-00149854v1
Généralisation du lasso aux modèles additifs Marta Avalos,Yves Grandvalet,Christophe Ambroise 2004, pp.83 Communication dans un congrès inserm-00149858v1
Regularization methods for additive models Marta Avalos,Yves Grandvalet,Christophe Ambroise 2003, pp.509-520 Communication dans un congrès inserm-00149855v1

Poster de conférence (16)

Predicting Non-Response to Cystic Fibrosis Modulators from Microbiota Using Standard and Custom Machine Learning Diego Kauer,Céline Hosteins,Marta Avalos,Laurence Delhaes,Raphaël Enaud JOBIM 2025 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2025, Bordeaux, France Poster de conférence hal-05337115v1
Data Transformations in Machine Learning Approaches for Studying Microbiota as a Biomarker of Non-Response Risk to CFTR Modulators Marta Avalos,Céline Hosteins,Diego Kauer,Chloé Renault,Raphaël Enaudet al. 46th Annual Conference of the International Society for Clinical Biostatistics, Aug 2025, Basel, Switzerland Poster de conférence hal-05377184v1
Serious Games to Address Cognitive Bias and Patient Flow in Emergency Departments Marta Avalos,Nadia Elorga-Castagnet,Dylan Russon,Florian Larrue,Cédric Gil-Jardiné The 5th ENLIGHT Teaching & Learning Conference 2025 - Playfulness for the Future of Higher Education, Oct 2025, Uppsala, Sweden Poster de conférence hal-05334672v2
The Teamwork Art in Public Health: a Qualitative Study. Pauline Arnal,Charlène Cochet,Arthur Fergelot,Lucie Sébastien,Ana Rivadeneyraet al. The 4th ENLIGHT Teaching and Learning Conference at TARTU 2024, Oct 2024, Tartu, Estonia Poster de conférence hal-04731734v1
Exploring Interaction Networks of Indoor Environmental Microbiome and Mycobiome in Asthmatic and Healthy Subjects: Insights from the COBRA-ENV 2 Study Louise-Eva Vandenborght,Marta Avalos,Camila Labarca,Vishwa Elankumaran,Raphaël Enaudet al. IUMS 2024 - International Union of Microbiological Societies, Oct 2024, Firenze, Italy Poster de conférence hal-04755097v1
AI-Driven Emergency Patient Flow Optimization is Both an Unmissable Opportunity and a Risk of Systematizing Health Disparities Dylan Russon,Marta Avalos,Ariel Guerra-Adames,Cédric Gil-Jardiné,Emmanuel Lagarde Doug Talbert; Soon Ae Chun. FLAIRS-37 2024 - 37th International FLAIRS Conference, May 2024, Miramar Beach, United States. LibraryPress@UF; FLVC Library Services, Proceedings of FLAIRS-37, May 19-21, Sandestin Beach, FL, 37, pp.4, 2024, ⟨10.32473/flairs.37⟩ Poster de conférence hal-04575571v1
Uncovering Judgment Biases in Emergency Triage: A Public Health Approach Based on Large Language Models Ariel Guerra Adames,Marta Avalos,Océane Dorémus,Cédric Gil-Jardiné,Emmanuel Lagarde ML4H 2024 - Machine Learning for Health Symposium, Dec 2024, Vancoucer, Canada. Poster de conférence hal-04846696v1
Association between indoor environmental microbiota of living spaces and chronic asthma and respiratory allergies in Europe: A systematic review Caroline Salaun-Ferron,Tarik Oufkir,Noufou Pêegdwendé Ouedraogo,Marta Avalos WoM 2023 - 4th International World of Microbiome Conference, Oct 2023, Sofia, Bulgaria Poster de conférence hal-04260931v1
Utility of multivariate data analysis and penalized meta-regression to explore sources of heterogeneity in microbiome meta-analyses Arthur Saracco,Marie Chavent,Marta Avalos WoM 2023 - 4th International World of Microbiome Conference, Oct 2023, Sofia, Bulgaria Poster de conférence hal-04260888v1
The respiratory microbiome alpha-diversity and chronic respiratory diseases in children: A systematic review Allan-Patrick Ake,Mariam Diomande,Daniela Valoura-Esteves,Raphael Enaud,Laurence Delhaeset al. WoM 2023 - 4th International World of Microbiome Conference, Oct 2023, Sofia, Bulgaria Poster de conférence hal-04260986v1
Developing Autonomy through an Entrepreneurial Project Lucie Sebastien,Marta Avalos ENLIGHT Teaching and Learning Conference 2023 -Empowering students for tomorrow, Oct 2023, Bordeaux, France Poster de conférence hal-04243910v1
The respiratory microbiota alpha-diversity in chronic lung diseases: a systematic review and meta-analysis Marta Avalos,Thibaud Alin,Clémence Métayer,Rodolphe Thiébaut,Raphael Enaudet al. 32nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Apr 2022, Lisboa, Portugal. 2022 Poster de conférence hal-03877313v1
A simulation framework of high-dimensional phylogenetic microbiota data Perrine Soret,Marta Fernandez Avalos,Laurence Delhaes,Rodolphe Thiébaut 29th International Biometric Conference, Jul 2018, Barcelone, Spain Poster de conférence hal-01856324v1
High-dimensional longitudinal genomic data: a survey and evaluation of publicly available implementations of machine learning methods Perrine Soret,Marta Fernandez Avalos,Rodolphe Thiébaut Statistical Analysis of Massive Genomic Data, Nov 2015, Evry, France. , 2015 Poster de conférence hal-01253151v1
État de l’art des méthodes de pénalisation pour données répétées dans le temps Perrine Soret,Marta Fernandez Avalos Bordeaux Computational Biology and Bioinformatics, 2014, Bordeaux, France Poster de conférence hal-01578294v1
État de l’art des méthodes de pénalisation pour données répétées dans le temps Perrine Soret,Marta Avalos Journées MAS de la SMAI, Aug 2014, Toulouse, France. Poster de conférence hal-01099367v1

Chapitre d'ouvrage (4)

Optimising criteria for manual smear review following automated blood count analysis: A machine learning approach Marta Avalos,Hélène Touchais,Marcela Henríquez-Henríquez Ajith Abraham, Hideyasu Sasaki, Ricardo Rios, Niketa Gandhi, Umang Singh, Kun Ma. Advances in Intelligent Systems and Computing, 1372, Springer, 2021, 978-3-030-73603-3. ⟨10.1007/978-3-030-73603-3_35⟩ Chapitre d'ouvrage hal-03085541v1
De-identification of Emergency Medical Records in French: Survey and Comparison of State-of-the-Art Automated Systems Loick Bourdois,Marta Avalos,Gabrielle Chenais,Frantz Thiessard,Philippe Revelet al. PROCEEDINGS OF FLAIRS-34 / Special Track: AI in Healthcare Informatics, 34, LibraryPress@UF, 2021, 2334-0762. ⟨10.32473/flairs.v34i1.128480⟩ Chapitre d'ouvrage hal-03241384v1
Pre-Training a Neural Language Model Improves the Sample Efficiency of an Emergency Room Classification Model Binbin Xu,Cédric Gil-Jardiné,Frantz Thiessard,Éric Tellier,Marta Avaloset al. Roman Barták, Eric Bell. Proceedings of the 33rd International Florida Artificial Intelligence Research Society Conference, The AAAI Press, 2020, 978-1-57735-821-3 Chapitre d'ouvrage hal-02611917v1
Competition analysis in swimming: inter- and intra-individual variability of stroking parameters management D. Simbana,P. Hellard,Marta Avalos Fernandez,L. Seifert Sport Science: Current and Future Trends for Performance Optimization, ESECS/IPLeiria, 2018, 978-989-8797-19-3 Chapitre d'ouvrage hal-03192968v1

Brevet (1)

Protection of digital creations (APP): CBCTool - Package R CBCtool - version 0.0.0.9000, 31-12-2020 Marta Avalos,Hélène Touchais France, Patent n° : IDDN.FR.001.480010.000.S.P.2021.000.31235. 2021 Brevet hal-03482917v1

Pré-publication, Document de travail (5)

A Counterfactual LLM Framework for Detecting Human Biases: A Case Study of Sex/Gender in Emergency Triage Ariel Guerra-Adames,Marta Avalos-Fernandez,Océane Dorémus,Leo Anthony Celi,Cédric Gil-Jardinéet al. 2025 Pré-publication, Document de travail hal-05385521v1
Development and Validation of Deep Learning Transformer Models for Building a Comprehensive and Real-time Trauma Observatory Gabrielle Chenais,Cédric Gil-Jardiné,Hélène Touchais,Marta Avalos Fernandez,Benjamin Contrandet al. 2022 Pré-publication, Document de travail hal-03877193v1
Effects of home environmental, behavioural and domestic activities on the risk of home injuries in French adults: Results from a prospective study Madelyn Rojas,Marta Avalos,Benjamin Contrand,Marion Dupuy,Catherine Sztal-Kutaset al. 2022 Pré-publication, Document de travail hal-03729445v1
Neural Language Model for Automated Classification of Electronic Medical Records at the Emergency Room. The Significant Benefit of Unsupervised Generative Pre-training Binbin Xu,Cédric Gil-Jardiné,Frantz Thiessard,Éric Tellier,Marta Fernandez Avaloset al. 2019 Pré-publication, Document de travail hal-02425097v1
Sélection de variables avec lasso dans la régression logistique conditionnelle Marta Avalos 2010 Pré-publication, Document de travail inserm-00541532v1

Thèse (1)

Modèles additifs parcimonieux Marta Avalos Autre [cs.OH]. Université de Technologie de Compiègne, 2004. Français. ⟨NNT : ⟩ Thèse tel-00008802v1

HDR (1)

Contribution à la sélection de modèle via pénalisation Lasso en Épidémiologie Marta Avalos Fernandez Machine Learning [stat.ML]. Université de Bordeaux, 2018 HDR tel-01964508v1