Mélisande Blein-Nicolas

Publications

Article dans une revue (33)

Modeling plant phenotypic plasticity and its underlying genetic architecture: a comparative study Sebastian Arenas,Yacine Djabali,Renaud Rincent,Philippe Cubry,Marie-Laure Martinet al. Journal of Experimental Botany, 2025, 76 (8), pp.2239-2251. ⟨10.1093/jxb/eraf013⟩ Article dans une revue hal-05087340v1
MCQR : Enhancing the Processing and Analysis of Quantitative Proteomics Data by Incorporating Chromatography and Mass Spectrometry Information Thierry Balliau,Anne Frambourg,Olivier Langella,Marie-Laure Martin,Michel Zivyet al. Journal of Proteome Research, 2025, ⟨10.1021/acs.jproteome.4c01119⟩ Article dans une revue hal-05087344v1
Full native timsTOF PASEF-enabled quantitative proteomics with the i2MassChroQ software package Olivier Langella,Thomas Renne,Thierry Balliau,Marlène Davanture,Sven Brehmeret al. Journal of Proteome Research, In press, Online ahead of print. ⟨10.1021/acs.jproteome.3c00732⟩ Article dans une revue hal-04645948v2
Identification of metabolic and protein markers representative of the impact of mild nitrogen deficit on agronomic performance of maize hybrids Maria Urrutia,Mélisande Blein-Nicolas,Olivier Fernandez,Stéphane Bernillon,Mickaël Maucourtet al. Metabolomics, 2024, 20 (6), pp.128. ⟨10.1007/s11306-024-02186-z⟩ Article dans une revue hal-04799829v1
Nonlinear network-based quantitative trait prediction from biological data Mélisande Blein-Nicolas,Emilie Devijver,Mélina Gallopin,Emeline Perthame Journal of the Royal Statistical Society: Series C Applied Statistics, 2024, 73 (3), pp.1-20. ⟨10.1093/jrsssc/qlae012⟩ Article dans une revue hal-04583513v1
The nitrate transporter-sensor MtNPF6.8 regulates the branched chain amino acid/pantothenate metabolic pathway in barrel medic (Medicago truncatula Gaertn.) root tip Łukasz Tarkowski,Thibault Clochard,Mélisande Blein-Nicolas,Michel Zivy,Thierry Baillauet al. Plant Physiology and Biochemistry, 2024, 206, pp.108213. ⟨10.1016/j.plaphy.2023.108213⟩ Article dans une revue hal-04480373v1
A Moderate Water Deficit Induces Profound Changes in the Proteome of Developing Maize Ovaries Thierry Balliau,Mariamawit Ashenafi,Mélisande Blein-Nicolas,Olivier Turc,Michel Zivyet al. Biomolecules, 2024, 14 (10), pp.1239. ⟨10.3390/biom14101239⟩ Article dans une revue hal-04802788v1
Physical Contact between Torulaspora delbrueckii and Saccharomyces cerevisiae Alters Cell Growth and Molecular Interactions in Grape Must Laura Chasseriaud,Warren Albertin,Mélisande Blein-Nicolas,Thierry Balliau,Michel Zivyet al. Beverages, 2023, 9 (3), pp.81. ⟨10.3390/beverages9030081⟩ Article dans une revue hal-04233435v1
Obituary: Dominique Job (1947-2022) Elisabeth Jamet,Marie-Thérèse Esquerré-Tugayé,Karine Gallardo-Guerrero,Norbert Rolland,Michel Zivyet al. Frontiers in Plant Science, 2023, 14, ⟨10.3389/fpls.2023.1188766⟩ Article dans une revue hal-04098956v1
Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides Grégoire Prunier,Mehdi Cherkaoui,Albane Lysiak,Olivier Langella,Mélisande Blein-Nicolaset al. BMC Bioinformatics, 2023, 24 (1), pp.421. ⟨10.1186/s12859-023-05555-y⟩ Article dans une revue hal-04296170v1
Plasticity QTLs specifically contribute to the genotype × water availability interaction in maize Yacine Djabali,Renaud Rincent,Marie-Laure Martin,Mélisande Blein-Nicolas TAG Theoretical and Applied Genetics, 2023, 136 (11), pp.228. ⟨10.1007/s00122-023-04458-z⟩ Article dans une revue hal-04002996v2
Sunflower Hybrids and Inbred Lines Adopt Different Physiological Strategies and Proteome Responses to Cope with Water Deficit Harold Duruflé,Thierry Balliau,Nicolas Blanchet,Adeline Chaubet,Alexandra Duhnenet al. Biomolecules, 2023, 13 (7), pp.1110. ⟨10.3390/biom13071110⟩ Article dans une revue hal-04161450v1
Dynamics of Protein Phosphorylation during Arabidopsis Seed Germination Emmanuel Baudouin,Juliette Puyaubert,Patrice Meimoun,Mélisande Blein-Nicolas,Marlène Davantureet al. International Journal of Molecular Sciences, 2022, 23 (13), pp.7059. ⟨10.3390/ijms23137059⟩ Article dans une revue hal-03705408v1
A combined test for feature selection on sparse metaproteomics data—an alternative to missing value imputation Sandra Plancade,Magali Berland,Mélisande Blein-Nicolas,Olivier Langella,Ariane Bassignaniet al. PeerJ, 2022, 10, pp.e13525. ⟨10.7717/peerj.13525⟩ Article dans une revue hal-04146583v1
Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis Maria Urrutia,Melisande Blein-Nicolas,Sylvain Prigent,Stéphane Bernillon,Catherine Debordeet al. Plant, Cell and Environment, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩ Article dans une revue hal-03107184v1
Proteomic data from leaves of twenty-four sunflower genotypes under water deficit Thierry Balliau,Harold Duruflé,Nicolas Blanchet,Melisande Blein-Nicolas,Nicolas Langladeet al. OCL Oilseeds and fats crops and lipids, 2021, 28, ⟨10.1051/ocl/2020074⟩ Article dans une revue (data paper) hal-03139476v1
Benefits of Iterative Searches of Large Databases to Interpret Large Human Gut Metaproteomic Data Sets Ariane Bassignani,Sandra Plancade,Magali Berland,Melisande Blein-Nicolas,Alain Guillotet al. Journal of Proteome Research, 2021, 20 (3), pp.1522-1534. ⟨10.1021/acs.jproteome.0c00669⟩ Article dans une revue hal-03135575v1
A systems genetics approach reveals environment-dependent associations between SNPs, protein coexpression, and drought-related traits in maize Melisande Blein-Nicolas,Sandra Sylvia Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. Genome Research, 2020, 30 (11), pp.1593-1604. ⟨10.1101/gr.255224.119⟩ Article dans une revue hal-03009577v1
Transcriptomic and proteomic data in developing tomato fruit Isma Belouah,Camille Bénard,Alisandra Denton,Melisande Blein-Nicolas,Thierry Balliauet al. Data in Brief, 2020, 28, pp.1-8. ⟨10.1016/j.dib.2019.105015⟩ Article dans une revue (data paper) hal-02539392v1
Peptide filtering differently affects the performances of XIC-based quantification methods Isma Belouah,Melisande Blein-Nicolas,Thierry Balliau,Yves Gibon,Michel Zivyet al. Journal of Proteomics, 2019, 193, pp.131-141. ⟨10.1016/j.jprot.2018.10.003⟩ Article dans une revue hal-02327322v1
Modeling Protein Destiny in Developing Fruit Isma Belouah,Christine Nazaret,Pierre Pétriacq,Sylvain Prigent,Camille Bénardet al. Plant Physiology, 2019, 180 (3), pp.1709-1724. ⟨10.1104/pp.19.00086⟩ Article dans une revue hal-02327302v1
Identification of Hanks-Type Kinase PknB-Specific Targets in the Streptococcus thermophilus Phosphoproteome Celine Henry,Lucia Haller,Melisande Blein-Nicolas,Michel Zivy,Alexis Canetteet al. Frontiers in Microbiology, 2019, 10, pp.1329. ⟨10.3389/fmicb.2019.01329⟩ Article dans une revue hal-02391885v1
Evaluation of optimized tube-gel methods of sample preparation for large-scale plant proteomics Thierry Balliau,Melisande Blein-Nicolas,Michel Zivy Proteomes, 2018, 6 (1(6)), ⟨10.3390/proteomes6010006⟩ Article dans une revue hal-01784903v1
X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification Olivier Langella,Benoît Valot,Thierry Balliau,Mélisande Blein-Nicolas,Ludovic Bonhommeet al. Journal of Proteome Research, 2017, 16 (2), pp.494-503. ⟨10.1021/acs.jproteome.6b00632⟩ Article dans une revue hal-01484169v1
Quantitative proteomics analysis confirmed oxidative metabolism predominates in Streptomyces coelicolor versus glycolytic metabolism in Streptomyces lividans Aaron Millan-Oropeza,Celine Henry,Melisande Blein-Nicolas,Anne Aubert,Fathi Moussaet al. Journal of Proteome Research, 2017, 16 (7), pp.2597-2613. ⟨10.1021/acs.jproteome.7b00163⟩ Article dans une revue hal-01569508v1
Thousand and one ways to quantify and compare protein abundances in label-free bottom-up proteomics Melisande Blein-Nicolas,Michel Zivy Biochimica et Biophysica Acta Proteins and Proteomics, 2016, 1864 (8), pp.883 - 895. ⟨10.1016/j.bbapap.2016.02.019⟩ Article dans une revue hal-01532597v1
A systems approach to elucidate heterosis of protein abundances in yeast Melisande Blein-Nicolas,Warren Albertin,Telma da Silva,Benoît Valot,Thierry T. Balliauet al. Molecular and Cellular Proteomics, 2015, 14 (8), pp.2056-2071. ⟨10.1074/mcp.M115.048058⟩ Article dans une revue hal-02636704v1
Yeast proteome variations reveal different adaptive responses to grape must fermentation Melisande Blein-Nicolas,Warren Albertin,Benoit B. Valot,Philippe Marullo,Delphine Sicardet al. Molecular Biology and Evolution, 2013, 30 (6), pp.1368-1383. ⟨10.1093/molbev/mst050⟩ Article dans une revue hal-02648058v1
In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches. Mathias Lorieux,Mélisande Blein,Jaime Lozano,Mathieu Bouniol,Gaétan Drocet al. Plant Biotechnology Journal, 2012, 10 (5), pp.555-68. ⟨10.1111/j.1467-7652.2012.00689.x⟩ Article dans une revue istex hal-00821958v1
Building a mutant resource for the study of disease resistance in rice reveals the pivotal role of several genes involved in defence Amandine Delteil,Melisande Blein-Nicolas,Odile Faivre-Rampant,Amira Guellim,Joan Estevanet al. Molecular Plant Pathology, 2012, 13 (1), pp.72-82. ⟨10.1111/j.1364-3703.2011.00731.x⟩ Article dans une revue hal-02644647v1
Including shared peptides for estimating protein abundances: A significant improvement for quantitative proteomics Melisande Blein-Nicolas,Hao Xu,Dominique de Vienne,Christophe Giraud,Sylvie Huetet al. Proteomics, 2012, 12 (18), pp.2797-2801. ⟨10.1002/pmic.201100660⟩ Article dans une revue istex hal-02645398v1
Oculimacula yallundae lifestyle revisited: relationships between the timing of eyespot symptom appearance, the development of the pathogen and the responses of infected partially resistant wheat plants M. Blein,A. Levrel,J. Lemoine,V. Gautier,M. Chevalieret al. Plant Pathology, 2009, 58 (1), pp.1-11. ⟨10.1111/j.1365-3059.2008.01940.x⟩ Article dans une revue hal-00730032v1
A cytomolecular approach to assess the potential of gene transfer from a crop (Triticum turgidum L.) to a wild relative (Aegilops geniculata Roth.) Marta Cifuentes,M. Blein,Elena Benavente TAG Theoretical and Applied Genetics, 2006, 112 (4), pp.657-664. ⟨10.1007/s00122-005-0168-z⟩ Article dans une revue istex hal-02659651v1

Communication dans un congrès (28)

Integration of phenomic, proteomic, and genomic data into a multi-scale network unravels missing heritability for maize response to water deficit Yacine Djabali,Renaud Rincent,Melisande Blein-Nicolas,Martin-Magniette Marie-Laure 67th Annual Maize Genetics Meeting, Mar 2025, St Louis Missouri, United States Communication dans un congrès hal-05175540v1
Integration of phenomic, proteomic, and genomic data into a multi-scale network unravels missing heritability for maize response to water deficit Melisande Blein-Nicolas SMAP, FPS, Sep 2024, Lille, France Communication dans un congrès hal-04814450v1
Complementing genomics with platform omics help decipher the genetic architecture of in-field productivity in the presence of genotype by Environment interactions. Baber Ali,Stephane Nicolas,Melisande Blein-Nicolas,Tristan Mary-Huard,Alain Charcossetet al. 3rd GxExM Symposium, Oct 2024, Wageningen, Netherlands Communication dans un congrès hal-05201495v1
Integration of phenomic, proteomic, and genomic data into a multi-scale network unravels missing heritability for maize response to water deficit Melisande Blein-Nicolas Journées Protéome Vert, Protéome Vert, Jun 2024, Montpellier, France Communication dans un congrès hal-04814473v1
Proteomics-based systems approach of maize response to water deficit Melisande Blein-Nicolas,Yacine Djabali,Claude Welcker,Llorenç Cabrera-Bosquet,Stephane Nicolaset al. 5. INPPO International Plant Proteomics Organization, May 2023, Thessaloniki, Greece Communication dans un congrès hal-04302629v1
On the fate of lipids and proteins during Chia (Salvia hispanica) germination and seedlings growth Thierry Chardot,Victor Labat,Christelle Louis-Mondésir,Sihem Hentati,Jean-Chrisologue Totozafyet al. Colloque Graines 2023, INRAE, Nov 2023, Versailles, France Communication dans un congrès hal-04459323v1
Développements pour la protéomique végétale à haut-débit Melisande Blein-Nicolas,Olivier Langella,Thomas Renne,Thierry Balliau,Marlène Davantureet al. Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Communication dans un congrès hal-03878360v1
Sub optimal 15N metabolic labelling in plant: A new way to perform large scale protein turnovers determination using the peptides isotopic distribution. Willy Vincent Bienvenut,Olivier Langella,Thierry Balliau,Filippo Rusconi,Marlène Davantureet al. ProteoVilamoura, Spanish, French and Portuguese Proteomics Societies, May 2022, VilaMoura, Portugal Communication dans un congrès hal-03815633v1
Rôles des variations structurales dans la construction des caractères moléculaires et phénotypiques Yacine Djabali,Melisande Blein-Nicolas,Stephane Nicolas Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Communication dans un congrès hal-03878368v1
Drought response QTLs detected on phenotypic ratios contribute to the genotype x environment interaction. Yacine Djabali,Renaud Rincent,Marie-Laure Martin-Magniette,Melisande Blein-Nicolas XXVth EUCARPIA Maize and Sorghum Conference, May 2022, Belgrade, Serbia Communication dans un congrès hal-03879700v1
Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficit Maria Urrutia,Melisande Blein-Nicolas,Olivier Fernandez,Stéphane Bernillon,Mickael Maucourtet al. Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Communication dans un congrès hal-03878405v1
SpecOMS, an open modification search approach challenging high-throughput single amino acid variations identification Luciana de Oliveira,Olivier Langella,Thierry Balliau,Dominique Tessier,Melisande Blein-Nicolaset al. 4th INPPO Conference, Mar 2021, Visioconférence, France Communication dans un congrès hal-03879763v1
A systems approach of drought response in maize Melisande Blein-Nicolas,Yacine Djabali,Thierry Balliau,Llorenç Cabrera-Bosquet,Sandra Negroet al. Séminaire du département des Science de l'Environnement de l'Université de Bordeaux, Nov 2021, Bordeaux, France Communication dans un congrès hal-03879809v1
A systems approach of drought tolerance in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabreraet al. AMAIZING Final Conference, Sep 2021, Online, France Communication dans un congrès hal-03879824v1
SpecOMS, an open search approach challenging the identification of peptides showing sequence polymorphism Luciana de Oliveira,Olivier Langella,Thierry Balliau,Dominique Tessier,Melisande Blein-Nicolaset al. Journées du Protéome Vert, Jun 2021, Visioconférence, France Communication dans un congrès hal-03879748v1
A systems approach of drought response in maize Melisande Blein-Nicolas,Yacine Djabali,Thierry Balliau,Llorenç Cabrera,Claude Welckeret al. Journée SPS-CLAND, Sep 2021, Online, France Communication dans un congrès hal-03879816v1
Multivariate analyses of heterogeneous omics data highlights the emergence of novel molecular and physiological strategies of drought response in sunflower. Harold Duruflé,Thierry Balliau,Nicolas Blanchet,Melisande Blein-Nicolas,Brigitte Manginet al. Omics Days, Feb 2020, Montpellier, France Communication dans un congrès hal-03509300v1
Systems genetics of drought-related traits in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. Evolutionary Systems Biology congress, Feb 2020, Cambridge, United Kingdom Communication dans un congrès hal-03879843v1
Statistical learning on heterogeneous omics data highlights the molecular basis of heterosis of drought response in sunflower Harold Duruflé,Thierry Balliau,Nicolas Blanchet,Melisande Blein-Nicolas,A Chaubetet al. Plant and Animal Genome XXVII, Jan 2019, San Diego, United States Communication dans un congrès hal-02391988v1
Integrating proteomics and genomics into systems genetics to better understand the mechanisms of drought tolerance in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabreraet al. Journée SFEAP-SFSM, Apr 2019, Paris, France Communication dans un congrès hal-03879865v1
Sunflower hybrids and inbred lines adopt different molecular and physiological strategies to respond to water deficit Harold Duruflé,Thierry Balliau,Nicolas Blanchet,Melisande Blein-Nicolas,Adeline Chaubetet al. Green Proteome, Jun 2019, Paris, France Communication dans un congrès hal-03509317v1
Systems genetics of drought tolerance in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. Symposium GisBV, Oct 2019, Paris, France Communication dans un congrès hal-03879857v1
Approaching absolute quantification using label-free shotgun proteomics coupled with external protein standards spiked in yeast extracts Aaron Millan Oropeza,Melisande Blein-Nicolas,Michel Zivy,Véronique Monnet,Celine Henry SFEAP 2018 Congress, Oct 2018, Albi, France. pp.1 Communication dans un congrès hal-02349950v1
Peptide filtering differently affects the performances of XIC-based quantifcation methods Melisande Blein-Nicolas,Isma Belouah,Thierry Balliau,Yves Gibon,Michel Zivyet al. Journées Protéome Vert, Apr 2018, Paris, France Communication dans un congrès hal-03879922v1
Proteome responses to water deficit in sunflower: genetic variability, heterosis and links with phenotypic traits. Harold Duruflé,Thierry Balliau,Melisande Blein-Nicolas,Nicolas Blanchet,Adeline Chaubetet al. INPPO World Congress, Sep 2018, Padova, Italy Communication dans un congrès hal-03509356v1
GWAS for protein expression under normal and water deficit conditions in maize leaves Melisande Blein-Nicolas,Thierry Balliau,Llorenç Cabrera-Bosquet,Hélène Corti,Claude Welckeret al. Journées du Protéome Vert, Mar 2017, Paris, France Communication dans un congrès hal-03879954v1
WAKomics: large-scale functional analysis of the WAK genes involved in the rice/Magnaporthe oryzae interaction A. Delteil,M. Blein,Corinne Michel,Jean-Benoit J.-B. Morel 8. Rencontres de Phytopathologie-Mycologie de la Société Française de Phytopathologie (SFP), Jan 2010, Aussois, France Communication dans un congrès hal-02758451v1
Exploitation de la collection de mutants riz Génoplante pour l'identification de gènes d'intérêt agronomique Mélisande Blein,Chloé Fallet,Nabila Yahiaoui,Veronique V. Chalvon-Poulier,Corinne Michelet al. Biotechnologies végétales et gestion durable des resistances face à des stress biotiques et abiotiques, Jun 2008, Rennes, France. p. 170 Communication dans un congrès hal-02821581v1

Poster de conférence (25)

Identifying Single Amino Acid Variant with SpecOMS an OpenModification Search engine Olivier Langella,Rémy Séraphin,Luciana de Oliveira,Melisande Blein-Nicolas EUPA 2025, Jun 2025, Saint Malo (FR), France Poster de conférence hal-05108269v1
MCQR: Enhancing the processing and analysis of quantitative proteomics data by incorporating chromatography and mass spectrometry information Thierry Balliau,Anne Aubert-Frambourg,Olivier Langella,Martin-Magniette Marie-Laure,Michel Zivyet al. EUPA 2025 saint-Malo, Jun 2025, Saint Malo (FR), France Poster de conférence hal-05113649v1
Advancing Rhizosphere Microbiota Characterization Willy Vincent Bienvenut,Laurencia Fera,Samuel Mondy,Pascal Ratet,Marlène Davantureet al. Rhizosphere 6, Jun 2025, Edimbourgh, United Kingdom Poster de conférence hal-05123454v1
Integration of phenomic, proteomic, and genomic data into a multi-scale network unravels missing heritability for maize response to water deficit Melisande Blein-Nicolas Conférence Jacques Monod "Une vie plastique", Jun 2024, Roscoff, France Poster de conférence hal-04814511v1
Large scale plant protein turnover measurement Willy Vincent Bienvenut,Marie-Hélène Andrieu,Olivier Langella,Thierry Balliau,Sophie Colombieet al. Annual ASMS conference, Jun 2024, Anaheim (CA), United States Poster de conférence hal-04590280v1
i2MassChroQ : full native timsTOF PASEF-enabled quantitative proteomics Olivier Langella,Thierry Balliau,Marlène Davanture,Mélisande Blein-Nicolas,Filippo Rusconi EuBIC-MS Winter School 2024, Jan 2024, Winterberg, Germany Poster de conférence hal-04321638v1
Overcoming the artefactual oxidation in SPEED extraction for leaf samples Thierry Balliau,Laurencia Fera,Marlène Davanture,Willy Vincent Bienvenut,Melisande Blein-Nicolas SMAP, Sep 2024, Lille, France Poster de conférence hal-04814494v1
Merging SpecOMS and X!Tandem identification results using machine learning algorithm in i2MassChroQ Olivier Langella,Thierry Balliau,Marlène Davanture,Filippo Rusconi,Melisande Blein-Nicolaset al. ProteoAix 2023 the 3rd Joint Meeting of Spanish, French, and Portuguese Proteomics Societies, Jun 2023, Aix en Provence, France Poster de conférence hal-04103233v1
Evaluation of the efficiency of the SPEED protein extraction protocol on plant samplesEvaluation of the efficiency of the SPEED protein extraction protocol on plant samples Thierry Balliau,Shabnam Huseynova,Marlène Davanture,Melisande Blein-Nicolas ProteoAix, Jun 2023, Aix-en-Provence, France Poster de conférence hal-04302587v1
Plateforme d'Analyse Protéomique de Paris Sud-Ouest (PAPPSO) Céline Henry,Thierry Balliau,Willy Vincent Bienvenut,Marlène Davanture,Olivier Langellaet al. Journées scientifiques Biosphera, Oct 2022, Palaiseau, France Poster de conférence hal-03878417v1
Presence/absence variations and SNPs equally contribute to the variations of protein and metabolite abundance Yacine Djabali,Melisande Blein-Nicolas,Annick Moing,Jorge Duarte,Stéphane Bernillonet al. Congrès Analytics 2022, Sep 2022, Nantes, France. Poster de conférence hal-03879730v1
X!TandemPipeline++: Software for Ion Mobility-Enabled Quantitative Proteomics in timsTOF Data Format Olivier Langella,Thomas Renne,Thierry Balliau,Marlène Davanture,Sven Brehmeret al. 70th ASMS Conference on Mass Spectrometry and Allied Topics ( ASMS 2022 ), Jun 2022, Minneapolis, United States. Poster de conférence hal-03687564v1
Open Modification Search using SpecOMS and i2MassChroQ Olivier Langella,Luciana de Oliveira,Michel Zivy,Melisande Blein-Nicolas,Dominique Tessier analytics 2022, Sep 2022, Nantes, France Poster de conférence hal-03735820v1
Upgrading X!TandemPipeline and MassChroQ for fast and accurate timsTOF native raw data support for quantitative proteomics Olivier Langella,Thomas Renne,Thierry Balliau,Marlène Davanture,Sven Brehmeret al. ProteoVilamoura 2022, May 2022, Vilamoura, Portugal Poster de conférence hal-03687443v1
i2MassChroQ: Software for Ion Mobility-Enabled Quantitative Proteomics in timsTOF Data Format Olivier Langella,Thomas Renne,Thierry Balliau,Marlène Davanture,Sven Brehmeret al. Analytics 2022, Sep 2022, Nantes, France Poster de conférence hal-03776788v1
Sub optimal 15N metabolic labelling in plant: A new way to perform large scale protein turnovers determination using the peptides isotopic distribution Willy Vincent Bienvenut,Liam Le Goffic,Olivier Langella,Thierry Balliau,Melisande Blein-Nicolas Analytics 2022, Sep 2022, Nantes, France Poster de conférence hal-03773594v1
Sub optimal 15N metabolic labelling in plant to determine protein turnovers: A new look at the isotopic distribution Willy Vincent Bienvenut,Olivier Langella,Thierry Baillau,Filippo Rusconi,Marlène Davantureet al. InPPO meeting, Mar 2021, Vancouvert, Canada Poster de conférence hal-03683573v1
Presence/absence variations and SNPs equally contribute to the variations of protein and metabolite abundance Yacine Djabali,Mélisande Blein,Annick Moing,Jorge Duarte,Thierry Bertonet al. 63rd Annual Maize Genetics Meeting, Mar 2021, Online, United States Poster de conférence hal-03368764v1
Comparaison des méthodes SP3, STrap, Tube-Gel et digestion liquide pour la préparation d'échantillons végétaux Thierry Balliau,Johanna Bruce,Melisande Blein-Nicolas,Michel Zivy SMAP, Sep 2019, Strasbourg, France Poster de conférence hal-03879894v1
Systems genetics of drought-related traits in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. Spectrométrie de Masse et Analyse Protéomique (SMAP), Sep 2019, Strasbourg, France. Poster de conférence hal-03879878v1
A systems biology approach to study the genetic variability of proteome responses to water deficit in sunflower Harold Duruflé,Thierry Balliau,Nicolas Blanchet,Mélisande Blein-Nicolas,Adeline Chaubetet al. First International Plant Systems Biology meeting, Sep 2018, Roscoff, France. Poster de conférence hal-03511745v1
Combined metabolomic and proteomic profiling of maize leaf to reveal metabolic responses to cold temperatures Maria Urrutia,Melisande Blein-Nicolas,Stéphane Bernillon,Catherine Deborde,Mickaël Maucourtet al. 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P25, 2018, 11. Journées Scientifiques du RFMF Poster de conférence hal-03125712v1
Systems genetics of drought-related traits in maize Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. 60th Annual Maize Genetics Conference, Mar 2018, Paris, France Poster de conférence hal-03879934v1
Genome wide association study for protein expression under normal and water deficit conditions in maize leaves Melisande Blein-Nicolas,Sandra Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera-Bosquetet al. Spectrométrie de Masse, Métabolomique et Analyse Protéomique (SMMAP) 2017, Oct 2017, Marne-la-Vallée, France. Poster de conférence hal-03879943v1
MassChroQ : A versatile tool for mass spectrometry quantification Edlira Nano,Benoit Valot,Olivier Langella,Ludovic Bonhomme,Mélisande Bleinet al. Final COST meeting : Plant Proteomics in Europe, 2011, May 2011, Dijon, France Poster de conférence hal-03663220v1

Pré-publication, Document de travail (3)

A combined test for feature selection on sparse metaproteomics data - alternative to missing value imputation Sandra Plancade,Magali Berland,Mélisande Blein-Nicolas,Olivier Langella,Ariane Bassignaniet al. 2021 Pré-publication, Document de travail hal-03276724v1
Proteomic data from leaves of twenty-four sunflower genotypes under water deficit Thierry Balliau,Harold Duruflé,Nicolas Blanchet,Melisande Blein-Nicolas,Nicolas B. Langladeet al. 2020 Pré-publication, Document de travail (preprint/prepublication) hal-02544815v1
Integrating proteomics and genomics into systems genetics provides novel insights into the mechanisms of drought tolerance in maize M. Blein,Sandra Silvia Negro,Thierry Balliau,Claude Welcker,Llorenç Cabrera Bosquetet al. 2019 Pré-publication, Document de travail (preprint/prepublication) hal-02788569v1

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DMP du projet &quot;PAPPSO Proteomics facility Mélisande Blein,Olivier Langella,Filippo Rusconi [0] INRAE. 2021 Rapport hal-03653233v2

HDR (1)

La relation génotype-phénotype: des approches réductionnistes aux approches holistiques basées sur la protéomique Melisande Blein-Nicolas Génomique, Transcriptomique et Protéomique [q-bio.GN]. Université Paris Saclay, 2025 HDR tel-05457137v1