Monika Coton Full Professor, ESIAB/LUBEM, University of Brest

Publications

Article dans une revue (76)

Ochratoxin A and citrinin production and migration in Penicillium verrucosum molded strawberry jams Monika Coton,Elsa Sielleur,Jean-Luc Jany,Franck Deniel,Elisabeth Poirieret al. Food Microbiology, 2026, 135, pp.104982. ⟨10.1016/j.fm.2025.104982⟩ Article dans une revue hal-05469386v1
Contribution of grape-associated fungal species to the FMA defect on grapes and in musts Adrien Destanque,Flora Pensec,Adeline Picot,Anne Thierry,Marie-Bernadette Maillardet al. LWT - Food Science and Technology, 2026, 241, pp.118945. ⟨10.1016/j.lwt.2025.118945⟩ Article dans une revue hal-05507613v1
Identification of quantitative trait loci (QTLs) for key cheese making phenotypes in the blue-cheese mold Penicillium roqueforti Thibault Caron,Ewen Crequer,Mélanie Le Piver,Stéphanie Le Prieur,Sammy Brunelet al. PLoS Genetics, 2025, 21 (4), pp.e1011669. ⟨10.1371/journal.pgen.1011669⟩ Article dans une revue hal-05072919v1
Enniatin Mycotoxins in Food: A Systematic Review of Global Occurrence, Biosynthesis, and Toxicological Impacts on &lt;i&gt;In&lt;/i&gt; &lt;i&gt;Vitro&lt;/i&gt; Human Cell Models France Coulet,Nolwenn Hymery,Emmanuel Coton,Monika Coton Comprehensive Reviews in Food Science and Food Safety, 2025, 24 (5), pp.e70270. ⟨10.1111/1541-4337.70270⟩ Article dans une revue hal-05398671v1
A workflow for sourcing and characterizing wheat field microorganisms for the biocontrol of Fusarium head blight Toan Bao Hung Nguyen,Flora Pensec,Jérôme Mounier,Monika Coton,Amandine Henri-Sanvoisinet al. Biological Control, 2025, 209, pp.105856. ⟨10.1016/j.biocontrol.2025.105856⟩ Article dans une revue hal-05386700v1
Impacts sur la santé publique de la dynamique des populations de renards Emmanuelle Gilot-Fromont,Isabelle Villena,Elsa Bonnaud,Claude Fischer,Etienne Giraudet al. Food Risk Assess Europe, 2025, 200 p. ⟨10.2903/fr.efsa.2025.FR-0062⟩ Article dans une revue hal-05124696v1
Discriminative power of DNA-based, volatilome, near infrared spectroscopy, elements and stable isotopes methods for the origin authentication of typical Italian mountain cheese using sPLS-DA modeling Marco Cardin,Jérôme Mounier,Emmanuel Coton,Barbara Cardazzo,Matteo Periniet al. Food Research International, 2024, 178 (6), pp.113975. ⟨10.1016/j.foodres.2024.113975⟩ Article dans une revue hal-04811538v1
Different metabolite profiles across Penicillium roqueforti populations associated with ecological niche specialisation and domestication E Crequer,G Cueff,J V Cristiansen,J C Frisvad,R C Rodríguez de la Vegaet al. IMA Fungus, 2024, 15 (1), pp.38. ⟨10.1186/s43008-024-00167-4⟩ Article dans une revue hal-04810041v1
Grape berry mycobiota and its contribution to fresh mushroom aroma off-odour in wine Adrien Destanque,Adeline Picot,Flora Pensec,Audrey Pawtowski,Nolwenn Rollandet al. OENO One, 2024, 58 (4), pp.8105. ⟨10.20870/oeno-one.2024.58.4.8105⟩ Article dans une revue hal-04809304v1
Occurrence of the two major regulated mycotoxins, ochratoxin A and fumonisin B1, in cereal and cereal-based products in Europe and toxicological effects: A review Beatriz Arce-López,Monika Coton,Emmanuel Coton,Nolwenn Hymery Environmental Toxicology and Pharmacology, 2024, 109, pp.104489. ⟨10.1016/j.etap.2024.104489⟩ Article dans une revue hal-04809227v1
Ecological diversity and associated volatilome of typical mountain Caciotta cheese from Italy Marco Cardin,Barbara Cardazzo,Monika Coton,Lisa Carraro,Rosaria Lucchiniet al. International Journal of Food Microbiology, 2024, 411, pp.110523. ⟨10.1016/j.ijfoodmicro.2023.110523⟩ Article dans une revue hal-04811554v1
Starter Culture Development and Innovation for Novel Fermented Foods Michael Gänzle,Ludovic Monnin,Jinshui Zheng,Lingxiao Zhang,Monika Cotonet al. Annual Review of Food Science and Technology, 2024, 15 (1), pp.211-239. ⟨10.1146/annurev-food-072023-034207⟩ Article dans une revue hal-04778633v1
Shifts in Fusarium Communities and Mycotoxins in Maize Residues, Soils, and Wheat Grains throughout the Wheat Cycle: Implications for Fusarium Head Blight Epidemiology Toan Bao Hung Nguyen,Amandine Henri-Sanvoisin,Monika Coton,Gaétan Le Floch,Adeline Picot Microorganisms, 2024, 12 (9), pp.1783. ⟨10.3390/microorganisms12091783⟩ Article dans une revue hal-04809305v1
Cytotoxic Effects of Major and Emerging Mycotoxins on HepaRG Cells and Transcriptomic Response after Exposure of Spheroids to Enniatins B and B1 France Coulet,Monika Coton,Cristian Iperi,Marine Belinger Podevin,Emmanuel Cotonet al. Toxins, 2024, 16 (1), pp.54. ⟨10.3390/toxins16010054⟩ Article dans une revue hal-04645590v1
A new cheese population in Penicillium roqueforti and adaptation of the five populations to their ecological niche Ewen Crequer,Jeanne Ropars,Jean‐luc Jany,Thibault Caron,Monika Cotonet al. Evolutionary Applications, 2023, 16 (8), pp.1438-1457. ⟨10.1111/eva.13578⟩ Article dans une revue hal-04192307v1
Comparison of metabarcoding taxonomic markers to describe fungal communities in fermented foods Olivier Rué,Monika Coton,Eric Dugat-Bony,Kate Howell,Françoise Irlingeret al. Peer Community Journal, 2023, 3, pp.e97. ⟨10.24072/pcjournal.321⟩ Article dans une revue hal-04234976v1
Functional diversity of Bisifusarium domesticum and the newly described Nectriaceae cheese-associated species Océane Savary,Emmanuel Coton,Marie-Bernadette Maillard,Frédéric Gaucheron,Christophe Le Meuret al. Food Research International, 2023, 168, pp.112691. ⟨10.1016/j.foodres.2023.112691⟩ Article dans une revue hal-04038208v1
Domestication in dry‐cured meat Penicillium fungi: Convergent specific phenotypes and horizontal gene transfers without strong genetic subdivision Ying‐chu Lo,Jade Bruxaux,Ricardo Rodríguez de la Vega,Samuel O'Donnell,Alodie Snircet al. Evolutionary Applications, 2023, 16 (9), pp.1637-1660. ⟨10.1111/eva.13591⟩ Article dans une revue hal-04291651v1
Autochthonous starter culture selection for Salame Piemonte PGI production Irene Franciosa,Ilario Ferrocino,Maria Rita Corvaglia,Manuela Giordano,Monika Cotonet al. Food Research International, 2022, 162, pp.112007. ⟨10.1016/j.foodres.2022.112007⟩ Article dans une revue hal-04731681v1
Brine salt concentration reduction and inoculation with autochthonous consortia: Impact on Protected Designation of Origin Nyons black table olive fermentations Marine Penland,Audrey Pawtowski,Azzurra Pioli,Marie-Bernadette Maillard,Stella Debaetset al. Food Research International, 2022, 155, pp.111069. ⟨10.1016/j.foodres.2022.111069⟩ Article dans une revue hal-03609442v1
Deciphering the Microbiota and Volatile Profiles of Algerian Smen, a Traditional Fermented Butter Rania Boussekine,Farida Bekhouche,Stella Debaets,Anne Thierry,Marie-Bernadette Maillardet al. Microorganisms, 2022, 10 (4), pp.736. ⟨10.3390/microorganisms10040736⟩ Article dans une revue hal-03626491v1
Authenticity and Typicity of Traditional Cheeses: A Review on Geographical Origin Authentication Methods Marco Cardin,Barbara Cardazzo,Jérôme Mounier,Enrico Novelli,Monika Cotonet al. Foods, 2022, 11 (21), pp.3379. ⟨10.3390/foods11213379⟩ Article dans une revue hal-04758295v1
Fusarium and Allied Fusarioid Taxa (FUSA). 1 P.W. Crous,M. Sandoval-Denis,M.M. Costa,J.Z. Groenewald,A.L. van Iperenet al. Fungal Systematics and Evolution, 2022, 9, pp.161-200. ⟨10.3114/fuse.2022.09.08⟩ Article dans une revue hal-05469160v1
Effect of abiotic factors and culture media on the growth of cheese-associated Nectriaceae species Océane Savary,Monika Coton,Jean-Luc Jany,Louis Coroller,Emmanuel Coton International Journal of Food Microbiology, 2022, 364, pp.109509. ⟨10.1016/j.ijfoodmicro.2021.109509⟩ Article dans une revue hal-04758627v1
Unexpected Nectriaceae species diversity in cheese, description of Bisifusarium allantoides sp. nov., Bisifusarium penicilloides sp. nov., Longinectria gen. nov. lagenoides sp. nov. and Longinectria verticilliforme sp. nov. Océane Savary,Monika Coton,J.C. Frisvad,Patrice Nodet,Jeanne Roparset al. Mycosphere Journal, 2021, 12 (1), pp.1077-1100. ⟨10.5943/mycosphere/12/1/13⟩ Article dans une revue hal-03499697v1
Bacterial diversity of traditional fermented milks from Cameroon and safety and antifungal activity assessment for selected lactic acid bacteria Francky Steve Nodem Sohanang,Monika Coton,Stella Debaets,Emmanuel Coton,Leopold Ngoune Tatsadjieuet al. LWT - Food Science and Technology, 2021, 138, pp.110635. ⟨10.1016/j.lwt.2020.110635⟩ Article dans une revue hal-03493918v1
Use of metabarcoding and source tracking to identify desirable or spoilage autochthonous microorganism sources during black olive fermentations Marine Penland,Jérôme Mounier,Audrey Pawtowski,Sylvie Tréguer,Stéphanie-Marie Deutschet al. Food Research International, 2021, 144, pp.110344. ⟨10.1016/j.foodres.2021.110344⟩ Article dans une revue hal-03205178v1
Linking Pélardon artisanal goat cheese microbial communities to aroma compounds during cheese-making and ripening Marine Penland,Hélène Falentin,Sandrine Parayre,Audrey Pawtowski,Marie-Bernadette Maillardet al. International Journal of Food Microbiology, 2021, 345, pp.109130. ⟨10.1016/j.ijfoodmicro.2021.109130⟩ Article dans une revue hal-03181204v1
Tailor-made microbial consortium for Kombucha fermentation: Microbiota-induced biochemical changes and biofilm formation Océane Savary,Jérôme Mounier,Anne Thierry,Elisabeth Poirier,Julie Jourdrenet al. Food Research International, 2021, 147, pp.110549. ⟨10.1016/j.foodres.2021.110549⟩ Article dans une revue hal-03279810v2
Microbial Ecology of French Dry Fermented Sausages and Mycotoxin Risk Evaluation During Storage Monika Coton,Franck Deniel,Jérôme Mounier,Rozenn Joubrel,Emeline Robieuet al. Frontiers in Microbiology, 2021, 12, pp.737140. ⟨10.3389/fmicb.2021.737140⟩ Article dans une revue hal-05469036v1
Mycobiota dynamics and mycotoxin detection in PGI Salame Piemonte Irene Franciosa,Monika Coton,Ilario Ferrocino,Maria R Corvaglia,Elisabeth Poirieret al. Journal of Applied Microbiology, 2021, 131 (5), pp.2336 - 2350. ⟨10.1111/jam.15114⟩ Article dans une revue hal-05469228v1
Independent domestication events in the blue-cheese fungus Penicillium roqueforti Emilie Dumas,Alice Feurtey,Ricardo C. Rodriguez de La Vega,Stephanie Le Prieur,Alodie Snircet al. Molecular Ecology, 2020, pp.1-22. ⟨10.1101/451773⟩ Article dans une revue hal-02625040v1
Domestication of the Emblematic White Cheese- Making Fungus Penicillium camemberti and Its Diversification into Two Varieties Jeanne Ropars,Estelle Didiot,Ricardo C Rodríguez de La Vega,Bastien Bennetot,Monika Cotonet al. Current Biology, 2020, 30, pp.4441-4453.e4. ⟨10.1016/j.cub.2020.08.082⟩ Article dans une revue hal-02984849v1
Penicillium roqueforti: an overview of its genetics, physiology, metabolism and biotechnological applications Emmanuel Coton,Monika Coton,Nolwenn Hymery,Jérôme Mounier,Jean-Luc Jany Fungal Biology Reviews, 2020, 34 (2), pp.59-73. ⟨10.1016/j.fbr.2020.03.001⟩ Article dans une revue hal-04809285v1
Deciphering Microbial Community Dynamics and Biochemical Changes During Nyons Black Olive Natural Fermentations Marine Penland,Stéphanie-Marie Deutsch,Hélène Falentin,Audrey Pawtowski,Elisabeth Poirieret al. Frontiers in Microbiology, 2020, 11 (article 586614), ⟨10.3389/fmicb.2020.586614⟩ Article dans une revue hal-02961412v1
Antifungal activity of fermented dairy ingredients: Identification of antifungal compounds Lucille Garnier,Marine Penland,Anne Thierry,Marie-Bernadette Maillard,Julien Jardinet al. International Journal of Food Microbiology, 2020, 322, pp.108574 Article dans une revue hal-02622774v1
Production and migration of patulin in Penicillium expansum molded apples during cold and ambient storage Monika Coton,Thibaud Bregier,Elisabeth Poirier,Stella Debaets,Nathalie Arnichet al. International Journal of Food Microbiology, 2020, 313, pp.108377 -. ⟨10.1016/j.ijfoodmicro.2019.108377⟩ Article dans une revue hal-03488624v1
Production and migration of ochratoxin A and citrinin in Comté cheese by an isolate of Penicillium verrucosum selected among Penicillium spp. mycotoxin producers in YES medium Monika Coton,Arnaud Auffret,Elisabeth Poirier,Stella Debaets,Emmanuel Cotonet al. Food Microbiology, 2019, 82, pp.551 - 559. ⟨10.1016/j.fm.2019.03.026⟩ Article dans une revue hal-03485035v1
Expanding the biodiversity of Oenococcus oeni through comparative genomics of apple cider and kombucha strains. Marc P. Lorentzen,Hugo Campbell-Sills,Tue S Jorgensen,Tue K Nielsen,Monika Cotonet al. BMC Genomics, 2019, 20, ⟨10.1186/s12864-019-5692-3⟩ Article dans une revue hal-03043113v1
Safety assessment of Gram-negative bacteria associated with traditional French cheeses M. Imran,N. Desmasures,M. Coton,Emmanuel Coton,Anne Le Fleche-Mateoset al. Food Microbiology, 2019, 79, pp.1-10. ⟨10.1016/j.fm.2018.11.001⟩ Article dans une revue hal-02086922v1
In vitro co-culture models to evaluate acute cytotoxicity of individual and combined mycotoxin exposures on Caco-2, THP-1 and HepaRG human cell lines Marie-Caroline Smith,Alexiane Gheux,Monika Coton,Stéphanie Madec,Nolwenn Hymeryet al. Chemico-Biological Interactions, 2018, 281, pp.51 - 59. ⟨10.1016/j.cbi.2017.12.004⟩ Article dans une revue hal-01866608v1
Biogenic amine and antibiotic resistance profiles determined for lactic acid bacteria and a propionibacterium prior to use as antifungal bioprotective cultures Monika Coton,Mégane Lebreton,Marcia Leyva Salas,Lucille Garnier,Marion Navarriet al. International Dairy Journal, 2018, 85, pp.21-26. ⟨10.1016/j.idairyj.2018.05.001⟩ Article dans une revue istex hal-01824179v1
Brettanomyces bruxellensis population survey reveals a diploid-triploid complex structured according to substrate of isolation and geographical distribution Isabelle Masneuf-Pomarede,Marta Avramova,Alice Cibrario,Emilien Peltier,Monika Cotonet al. Scientific Reports, 2018, 8 (1), pp.1-13. ⟨10.1038/s41598-018-22580-7⟩ Article dans une revue hal-01900511v1
Functional diversity within the [i]Penicillium roqueforti[/i] species Guillaume Gillot,Jean-Luc Jany,Elisabeth Poirier,Marie-Bernadette Maillard,Stella Debaetset al. International Journal of Food Microbiology, 2017, 241, pp.141-150. ⟨10.1016/j.ijfoodmicro.2016.10.001⟩ Article dans une revue istex hal-01386935v1
Combined effect of the Saccharomyces cerevisiae lag phase and the non-Saccharomyces consortium to enhance wine fruitiness and complexity Isabelle Masneuf-Pomarede,Sophie Tempere,Axel Marchal,Jean-Christophe Barbe,Marta Avramovaet al. Applied Microbiology and Biotechnology, 2017, 101 (20), pp.7603 - 7620. ⟨10.1007/s00253-017-8492-1⟩ Article dans une revue hal-01900508v1
Genetic basis for mycophenolic acid production and strain-dependent production variability in Penicillium roqueforti Guillaume Gillot,Jean-Luc Jany,Rebeca Dominguez-Santos,Elisabeth Poirier,Stella Debaetset al. Food Microbiology, 2017, 62, pp.239 - 250. ⟨10.1016/j.fm.2016.10.013⟩ Article dans une revue hal-01866769v1
Penicillium roqueforti PR toxin gene cluster characterization Pedro Hidalgo,Elisabeth Poirier,Ricardo Ullán,Justine Piqueras,Laurence Meslet-Cladièreet al. Applied Microbiology and Biotechnology, 2017, 101 (5), pp.2043 - 2056. ⟨10.1007/s00253-016-7995-5⟩ Article dans une revue hal-01866741v1
Unraveling microbial ecology of industrial-scale Kombucha fermentations by metabarcoding and culture-based methods Monika Coton,Audrey Pawtowski,Bernard Taminiau,Gaëtan Burgaud,Franck Denielet al. FEMS Microbiology Ecology, 2017, 93 (5), ⟨10.1093/femsec/fix048⟩ Article dans une revue hal-01866765v1
Effect of PR toxin on THP1 and Caco-2 cells: an in vitro study N. Hymery,Olivier Puel,S. Tadrist,Cécile Canlet,H. Le Scouarnecet al. World Mycotoxin Journal, 2017, 10 (4), pp.375 - 386. ⟨10.3920/WMJ2017.2196⟩ Article dans une revue hal-01866798v1
Phylogeny of xerophilic aspergilli (subgenus Aspergillus ) and taxonomic revision of section Restricti F. Sklenář,Ž. Jurjević,P. Zalar,J. Frisvad,M. Visagieet al. Studies in Mycology, 2017, 88, pp.161 - 236. ⟨10.1016/j.simyco.2017.09.002⟩ Article dans une revue hal-01866791v1
Antifungal Microbial Agents for Food Biopreservation—A Review Marcia Leyva Salas,Jerome Mounier,Florence Valence,Monika Coton,Anne Thierryet al. Microorganisms, 2017, 5 (37), Open Acess. ⟨10.3390/microorganisms5030037⟩ Article dans une revue (article de synthèse) hal-01568139v1
Microsatellite analysis of Saccharomyces uvarum diversity Isabelle Masneuf-Pomarede,Franck Salin,Marine Börlin,Emmanuel Coton,Monika Cotonet al. FEMS Yeast Research, 2016, 16 (2), 12 p. ⟨10.1093/femsyr/fow002⟩ Article dans une revue hal-01837775v1
Yamadazyma barbieri f.a. sp nov., an ascomycetous anamorphic yeast isolated from a Mid-Atlantic Ridge hydrothermal site (-2300m) and marine coastal waters Gaetan Burgaud,Monika Coton,Noémie Vignolles,Stella Debaets,Natália O. P. Macielet al. International Journal of Systematic and Evolutionary Microbiology, 2016, 66, pp.3600-3606. ⟨10.1099/ijsem.0.001239⟩ Article dans une revue hal-01607430v1
Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents Gaétan Burgaud,Nguyen Thi Minh Hué,Danielle Arzur,Monika Coton,Jean-Marie Perrier-Cornetet al. Research in Microbiology, 2015, 166 (9), pp.700-709. ⟨10.1016/j.resmic.2015.07.005⟩ Article dans une revue hal-02321309v1
Insights into Penicillium roqueforti Morphological and Genetic Diversity Guillaume Gillot,Jean-Luc Jany,Monika Coton,Gaëtan Le Floch,Stella Debaetset al. PLoS ONE, 2015, ⟨10.1371/journal.pone.0129849⟩ Article dans une revue hal-01302692v1
Phylogenomic Analysis of Oenococcus oeni Reveals Specific Domestication of Strains to Cider and Wines. Hugo Campbell-Sills,Mariette El Khoury,Marion Favier,Andrea Romano,Franco Biasioliet al. Genome Biology and Evolution, 2015, 7 (6), pp.1506-18. ⟨10.1093/gbe/evv084⟩ Article dans une revue hal-01202801v1
Two novel &lt;em&gt;Saccharomycopsis&lt;/em&gt; species isolated from black olive brines and a tropical plant. Description of &lt;em&gt;Saccharomycopsis olivae&lt;/em&gt; f. a., sp. nov. and &lt;em&gt;Saccharomycopsis guyanensis&lt;/em&gt; f. a., sp. nov. Reassignment of &lt;em&gt;Candida amapae&lt;/em&gt; to &lt;em&gt;Saccharomycopsis amapae&lt;/em&gt; f. a., comb. nov., &lt;em&gt;Candida lassenensis&lt;/em&gt; to &lt;em&gt;Saccharomycopsis lassenensis&lt;/em&gt; f. a., comb. nov. and &lt;em&gt;Arthroascus babjevae&lt;/em&gt; to &lt;em&gt;Saccharomycopsis babjevae&lt;/em&gt; f. a., comb. nov. Noemie Jacques,Christelle C. Louis-Mondesir,Monika Coton,Emmanuel Coton,Serge Casaregola International Journal of Systematic and Evolutionary Microbiology, 2014, 64 (6), pp.2169-2175. ⟨10.1099/ijs.0.060418-0⟩ Article dans une revue hal-02630357v1
Induction of sexual reproduction and genetic diversity in the cheese fungus Penicillium roqueforti Jeanne Ropars,Manuela Lopez-Villavicencio,Joelle Dupont,Alodie Snirc,Guillaume Gillotet al. Evolutionary Applications, 2014, ⟨10.1111/eva.12140⟩ Article dans une revue hal-01302704v1
Biodiversity and dynamics of the bacterial community of packaged king scallop (Pecten maximus) meat during cold Storage Monika Coton,Jean-Jacques Joffraud,L. Mekhtiche,Francoise Leroi,Emmanuel Coton Food Microbiology, 2013, 35 (2), pp.99-107. ⟨10.1016/j.fm.2013.02.011⟩ Article dans une revue hal-04499381v1
Sex in Cheese: Evidence for Sexuality in the Fungus Penicillium roqueforti. Jeanne Ropars,Joëlle Dupont,Eric Fontanillas,Ricardo C Rodríguez de La Vega,Fabienne Malagnacet al. PLoS ONE, 2012, 7 (11), pp.e49665. ⟨10.1371/journal.pone.0049665⟩ Article dans une revue hal-00758760v1
Implications of Lactobacillus collinoides and Brettanomyces/Dekkera anomala in phenolic off-flavour defects of ciders Nicolas Buron,Monika Coton,Patrick Legendre,Jérôme Ledauphin,Valérie Bouchartet al. International Journal of Food Microbiology, 2012, 153 (1-2), pp.159-165. ⟨10.1016/j.ijfoodmicro.2011.11.002⟩ Article dans une revue istex hal-02148977v1
Screening of representative cider yeasts and bacteria for volatile phenol-production ability Nicolas Buron,Monika Coton,Cécile Desmarais,Jérôme Ledauphin,Hugues Guichardet al. Food Microbiology, 2011, 28 (7), pp.1243-1251. ⟨10.1016/j.fm.2011.05.001⟩ Article dans une revue istex hal-02343119v1
Biogenic amines in fermented foods G. Spano,P. Russo,Aline Lonvaud-Funel,Patrick Lucas,H. Alexandreet al. European Journal of Clinical Nutrition, 2010, 64, pp.S95-S100. ⟨10.1038/ejcn.2010.218⟩ Article dans une revue hal-02666992v1
Biodiversity of coagulase-negative Staphylococci in French cheeses, dry fermented sausages, processing environments and clinical samples. Emmanuel Coton,Marie-Hélène Desmonts,Sabine Leroy,Monika Coton,Emmanuel Jametet al. International Journal of Food Microbiology, 2010, 137 (2-3), pp.221-9. ⟨10.1016/j.ijfoodmicro.2009.11.023⟩ Article dans une revue istex hal-00750792v1
Evidence of distinct populations and specific subpopulations within the species Oenococcus oeni Julen Bridier,Olivier Claisse,Monika Coton,Emmanuel Coton,Aline Lonvaud-Funel Applied and Environmental Microbiology, 2010, 76 (23), pp.7754-7764. ⟨10.1128/AEM.01544-10⟩ Article dans une revue hal-02659761v1
Occurrence of biogenic amine-forming lactic acid bacteria in wine and cider Monika Coton,Andrea Romano,G. Spano,Katja Ziegler,C. Vetranaet al. Food Microbiology, 2010, 27 (8), pp.1078-1085. ⟨10.1016/j.fm.2010.07.012⟩ Article dans une revue istex hal-02665681v1
Origin of the putrescine-producing ability of the coagulase-negative bacterium staphylococcus epidermidis 2015B Emmanuel Coton,Niels Mulder,Monika Coton,Sylvie S. Pochet,Hein Tripet al. Applied and Environmental Microbiology, 2010, 16, pp.5570-5576. ⟨10.1128/AEM.00441-10⟩ Article dans une revue hal-02659782v1
Rapid identification of the three major species of dairy obligate heterofermenters Lactobacillus brevis, Lactobacillus fermentum and Lactobacillus parabuchneri by species-specific duplex PCR Monika Coton,Françoise Berthier,Emmanuel Coton FEMS Microbiology Letters, 2008, 284, pp.150-157. ⟨10.1111/j.1574-6968.2008.01206.x⟩ Article dans une revue hal-02667336v1
Polyphasic study of Zymomonas mobilis strains revealing the existence of a novel subspecies Z. mobilis subsp. francensis subsp. nov., isolated from French cider Monika Coton,Jean-Marie Laplace,Yannick Auffray,Emmanuel Coton International Journal of Systematic and Evolutionary Microbiology, 2006, 56 (Pt 1), pp.121-125. ⟨10.1099/ijs.0.63732-0⟩ Article dans une revue hal-02659658v1
Framboise&quot;' spoilage in French ciders: Zymomonas mobilis implication and characterization Monika Coton,Jean-Marie Laplace,Yannick Auffray,E. Coton LWT - Food Science and Technology, 2006, 39 (9), pp.972-979 Article dans une revue hal-02655993v1
Yeast ecology in French cider and black olive natural fermentations Emmanuel Coton,Monika Coton,Delphine Levert,Serge Casaregola,Danièle Sohier International Journal of Food Microbiology, 2006, 108 (1), pp.130-135. ⟨10.1016/j.ijfoodmicro.2005.10.016⟩ Article dans une revue istex hal-02661785v1
yeast ecology in french cider and black olive natural fermentations Emmanuel Coton,Monika Coton,Delphine Levert,Serge Casaregola,Danièle Sohier International Journal of Food Microbiology, 2006, 108, pp.130-135 Article dans une revue hal-00089674v1
Duplex PCR method for rapid detection of Zymomonas mobilis in cider Monika Coton,Jean-Marie Laplace,Yannick Auffray,Emmanuel Coton Journal of the Institute of Brewing, 2005, 111 (3), pp.299-303 Article dans une revue hal-02679955v1
The Enterococcus faecalis SigV Protein Is an Extracytoplasmic Function Sigma Factor Contributing to Survival following Heat, Acid, and Ethanol Treatments Abdellah Benachour,Cécile Muller,Monika Dabrowski-Coton,Yoann Le Breton,Jean-Christophe Giardet al. Journal of Bacteriology, 2005, 187 (3), pp.1022-1035. ⟨10.1128/JB.187.3.1022-1035.2005⟩ Article dans une revue hal-02182246v1
Identification of the gene encoding a putative tyrosine decarboxylase of Carnobacterium divergens 508. Development of molecular tools for the detection of tyramine-producing bacteria Monika Coton,E. Coton,Philippe Lucas,A. Lonvaud Food Microbiology, 2004, 21 (2), pp.125-130 Article dans une revue hal-02672746v1
The tyrosine decarboxylase operon of Lactobacillus brevis IOEB 9809 : characterization and conservation in tyramine-producing bacteria Philippe Lucas,J. Landete,Monika Coton,E. Coton,A. Lonvaud-Funel FEMS Microbiology Letters, 2003, 229 (1), pp.65-71 Article dans une revue hal-02670577v1

Communication dans un congrès (19)

« Fresh mushroom aroma » off-flavor in wines : a research wrap-up Marion Hervé,Léa Delcros,Adrien Destanque,E. Augès,Sylvie Collaset al. Sparkling Wine Forum 2024, EFFEVENT; OIV, Jun 2024, Brescia, Italy Communication dans un congrès hal-04957059v1
Citizen science project to determine fungal diversity from moldy foods in consumer households and evaluate mycotoxin exposure risk Charlotte Réant,Philippe Dantigny,Hymery Nolwenn,Emmanuel Coton,Monika Coton 45th Mycotoxin Workshop 2024, Jun 2024, Vienne (Austria), Austria Communication dans un congrès hal-04978485v1
New markers for monitoring “fresh mushroom aroma” in wine: A dual approach using microbiological and chemical tools from the vineyard to winery–A synthesis of recent research advances Marion Hervé,Léa Delcros,Adrien Destanque,Sylvie Collas,Laurence Guerinet al. 45. World Congress of Vine and Wine, IVES, Oct 2024, Dijon, France Communication dans un congrès hal-04957037v1
Citizen science project to determine fungal diversity from moldy foods in consumer households and evaluate the mycotoxin risk Charlotte Réant,Philippe Dantigny,Hymery Nolwenn,Emmanuel Coton,Monika Coton Journées Mycotoxines 10ème édition, May 2024, Montpellier, France Communication dans un congrès hal-04978364v1
Evaluation of enniatins and beauvericin toxicity by innovative in vitro model approaches F Coulet,Monika Coton,Emmanuel Coton,Hymery Nolwenn Mycotoxin Workshop, Jun 2023, Celle, Germany Communication dans un congrès hal-04809437v1
Diversité fongique d’aliments moisis chez les consommateurs et caractérisation de la migration de mycotoxines sur légumes : une première étape pour concilier sécurité microbiologique des aliments et lutte contre le gaspillage alimentaire Charlotte Réant,Philippe Dantigny,Elisabeth Poirier,Amélie Weill,Franck Denielet al. IBSAM | Institut Brestois Santé Agro Matière, Jun 2023, Brest, France Communication dans un congrès hal-04978552v1
Microbiote des produits fermentés par approches culturales et métagénomiques Exemple d'un fromage artisanal : le Pélardon Marine Penland,Hélène Falentin,S Parayre,A Pawtowski,M-B Maillardet al. 23ème édition du colloque du Club des Bactéries Lactiques, UMR INRAE - Institut Agro STLO (Science et Technologie du Lait et de l’Œuf), Jun 2022, Rennes, France Communication dans un congrès hal-03693861v1
Adaptive differences between Penicillium roqueforti &quot;cheese&quot; and “non-cheese” populations Ewen Crequer,Thibault Caron,Monika Coton,Jean-Luc Jany,Jeanne Roparset al. International Commision on Food Mycology, Jul 2022, Utrecht, France Communication dans un congrès hal-04836515v1
Adaptive differences between Penicillium roqueforti “cheese” and “non-cheese” populations Ewen Crequer,Thibault Caron,Monika Coton,Jean-Luc Jany,Jeanne Roparset al. Journées des doctorants de l’ED EGAAL, Jul 2022, Rennes, France Communication dans un congrès hal-04836481v1
Distinct extrolite profiles in the different Penicillium roqueforti populations. Ewen Crequer,Thibault Caron,Jean-Luc Jany,Jeanne Ropars,Emmanuel Cotonet al. Journées mycotoxines JM2022, Sep 2022, Marseille, France Communication dans un congrès hal-04836541v1
Adaptive differences between Penicillium roqueforti cheese and non-cheese populations Ewen Crequer,Thibault Caron,Monika Coton,Jean-Luc Jany,Jeanne Roparset al. Fungal Genetics Ile-de-France Symposium, Nov 2021, Paris, France Communication dans un congrès hal-04836438v1
Pélardon AOP des Cévennes, du lait cru au fromage affiné : dynamiques microbiennes et évolution des arômes Marine Penland,Hélène Falentin,Sandrine Parayre,Audrey Pawtowski,Marie-Bernadette Maillardet al. Réunion virtuelle "Glande mammaire lait" / Galactinnov, réseau galactinnov, Nov 2021, live, France Communication dans un congrès hal-03435234v1
Étude par néphélométrie laser de l'influence de facteurs abiotiques sur la croissance de différentes populations de Penicillium roqueforti Ewen Crequer,Monika Coton,Jean-Luc Jany,Jeanne Ropars,Antoine Brancaet al. Colloque IBSAM, Institut Brestois Santé-Agro-Matière, Nov 2021, Brest, France Communication dans un congrès hal-04836079v1
Understanding Kombucha fermentations: dynamic follow-up of a lab scale fermentation Océane Savary,Jérôme Mounier,Anne Thierry,Elisabeth Poirier,Julie Jourdrenet al. FEMS 2019, Jul 2019, Glasgow, United Kingdom Communication dans un congrès hal-03279747v1
Benefits and risks of gram negative bacteria within complex microbial consortia in model semi-hard cheese Céline Delbès,Emmanuel Coton,Monika Coton,S. Ganet,Stéphane Miszczychaet al. 22. International ICFMH Symposium, FoodMicro 2010, Aug 2010, Copenhague, Denmark. p.14 Communication dans un congrès hal-01195436v1
Diversité intraspécifique chez Oenococcus oeni Julen Bridier,Olivier Claisse,Monika Coton,Cécile Desmarais,Cecile Miot-Sertieret al. Journées Microbiologistes de l’INRA., May 2010, Poitiers, France. 1 p Communication dans un congrès hal-02821971v1
Interactions de bactéries à gram négatif dans un écosystème microbien complexe de fromage à pâte pressée non cuite Céline Delbès,E. Coton,M. Coton,S. Helinck,Francoise Irlingeret al. Journées des microbiologistes de l'INRA, May 2010, Poitiers, France Communication dans un congrès hal-01195442v1
Biodiversity of NSLAB in French cheese and rapid identification of obligate heterofermentative species Lactobacillus brevis, Lb. fermentum and Lb parabuchneri using species-specific primers Monika Coton,Françoise Berthier,Emmanuel Coton 7. Congrès de la Société Française de Microbiologie, May 2007, Nantes, France. 1 p Communication dans un congrès hal-02823217v1
Sequence and analysis of the tyrosine decarboxylase operon of Lactobacillus brevis 9809 isolated from wine J.M. Landete,Philippe Lucas,Monika Coton,E. Coton,A. Lonvaud-Funel 7. Symposium international d'oenologie, Jun 2003, Bordeaux, France Communication dans un congrès hal-02764023v1

Pré-publication, Document de travail (3)

Generation of diversity in the blue cheese mold&lt;i&gt;Penicillium roqueforti&lt;/i&gt;and identification of pleiotropic QTL for key cheese-making phenotypes Thibault Caron,Ewen Crequer,Mélanie Le Piver,Stéphanie Le Prieur,Sammy Brunelet al. 2024 Pré-publication, Document de travail hal-04728775v1
Different metabolite profiles across Penicillium roqueforti populations associated with ecological niche specialisation and domestication Ewen Crequer,Emmanuel Coton,Gwennina Cueff,Johan Cristiansen,Jens Frisvadet al. 2024 Pré-publication, Document de travail hal-04728789v1
Domestication in dry-cured meat Penicillium fungi: convergent specific phenotypes and horizontal gene transfers without strong genetic subdivision Ying-Chu Lo,Jade Bruxaux,Ricardo Rodríguez de la Vega,Alodie Snirc,Monika Cotonet al. 2022 Pré-publication, Document de travail hal-03812544v1

Rapport (7)

Méthodes d’évaluation des risques sanitaires et environnementaux et des enjeux socio-économiques associés aux plantes obtenues au moyen de certaines nouvelles techniques génomiques (NTG) Michel Gautier,Guillaume Fried,Thaura Ghneim-Herrera,Florian Guillou,Valérie Le Correet al. Saisine n°2021-SA-0019, Anses. 2024 Rapport (rapport d’expertise collective) hal-04841808v1
Avis de l’Anses relatif à l’évaluation du risque de transmission du complexe Mycobacterium tuberculosis à l'humain via la consommation de produits laitiers crus issus d’un élevage caprin infecté Georges Daube,Michel Federighi,Claire Le Henaff-Le Marrec,Philippe Fravalo,Frédéric Auvrayet al. Saisine n°2024-SA-0067, Anses. 2024, 26 p Rapport (rapport d’expertise collective) anses-04854468v1
Avis de l'Anses relatif à la définition des souches pathogènes d’Escherichia coli productrices de shigatoxines Philippe Fravalo,Frédéric Auvray,Mickaël Boni,Frédéric Borges,Gilles Bornertet al. Saisine n°2020-SA-0095, Anses. 2023, 63 p Rapport (rapport d’expertise collective) anses-04171498v1
Avis de l'Anses relatif à la présence de parasites Toxocara spp. dans les viandes de sanglier sauvage Philippe Fravalo,Frédéric Auvray,Mickaël Boni,Frédéric Borges,Gilles Bornertet al. Saisine n°2023-SA-0055, Anses. 2023, pp.20 Rapport (rapport d’expertise collective) anses-04350896v1
Avis de l'Anses relatif à un document d’appui aux lignes directrices de l’arrêté du 7 mars 2011 relatives à l’évaluation de l'efficacité antimicrobienne des auxiliaires technologiques utilisés comme agents de décontamination des denrées d’origine végétale Régine Talon,Michel Baccaunaud,Frédéric Borges,Gilles Bornert,Catherine Chubilleauet al. Saisine n°2022-SA-0136, Anses. 2023, 55 p Rapport (rapport d’expertise collective) anses-04453336v1
Évaluation des impacts sur la santé publique de la dynamique des populations de renards Emmanuelle Gilot-Fromont,Isabelle Villena,Elsa Bonnaud,Claude Fischer,Etienne Giraudet al. Saisine n°2022-SA-0049, Anses. 2023, 200 p Rapport (rapport d’expertise collective) anses-04171242v1
Élaboration d’une liste de couples « bactérie/famille d’antibiotiques » d’intérêt prioritaire dans le contrôle de la diffusion de l’antibiorésistance de l’animal aux humains et propositions de mesures techniques en appui au gestionnaire Eric Oswald,Xavier Bertrand,Catherine Chubilleau,Lucie Collineau,Mélanie Colomb-Cotinatet al. Saisine n°2020-SA-0066, Anses. 2023, 192 p Rapport (rapport d’expertise collective) anses-04342509v1

Proceedings/Recueil des communications (1)

New markers for monitoring “fresh mushroom aroma” in wine: A dual approach using microbiological and chemical tools from the vineyard to winery–A synthesis of recent research advances Marion Hervé,Léa Delcros,Adrien Destanque,Sylvie Collas,Laurence Guerinet al. 45. World Congress of Vine and Wine, Oct 2024, Dijon, France. Bulletin de l'OIV, International Viticulture and Enology Society; Office International de la Vigne & du Vin (OIV), 2024, ⟨10.58233/oPGF0eIX⟩ Proceedings/Recueil des communications hal-04956857v1

Chapitre d'ouvrage (3)

Penicillium roqueforti Emmanuel Coton,J.-L. Jany,M. Coton Encyclopedia of Dairy Sciences, Elsevier, pp.599-606, 2022, ⟨10.1016/B978-0-08-100596-5.01092-1⟩ Chapitre d'ouvrage hal-04809311v1
Smear-ripened cheeses Jérôme Mounier,Monika Coton,Francoise Irlinger,Sophie Landaud,Pascal Bonnarme Cheese : Chemistry, Physics and Microbiology, 4ème ed., Elsevier, Academic Press, pp.955-996, 2017, 978-0-12-417017-9 978-0-12-417012-4. ⟨10.1016/B978-0-12-417012-4.00038-7⟩ Chapitre d'ouvrage hal-02791512v1
Cider (Cyder; Hard Cider): The Product and Its Manufacture Emmanuel Coton,M. Coton,H. Guichard Encyclopedia of Food and Health, Elsevier, pp.119-128, 2016, ⟨10.1016/B978-0-12-384947-2.00163-X⟩ Chapitre d'ouvrage hal-04809776v1

Poster de conférence (12)

Mycotoxin production among Penicillium roqueforti populations Ewen Crequer,Thibault Caron,Jean-Luc Jany,Jeanne Ropars,Antoine Brancaet al. 43rd Mycotoxin Workshop 2022, May 2022, Toulouse, France Poster de conférence hal-04836573v1
Testing markers to characterize microbial communities in food ecosystems using a metagenomics approach Claire Vincent,Serge Casaregola,Monika Coton,Céline Delbès,Hugo Devillerset al. JOBIM, Jun 2020, Montpellier, France Poster de conférence hal-02914960v1
Exploring microbial diversity of naturally fermented PDO Nyons table olives Marine Penland,Stéphanie-Marie Deutsch,Hélène Falentin,Christophe Le Meur,Emmanuel Cotonet al. FEMS – 8th Congress of European Microbiologists, Jul 2019, Glasgow, United Kingdom Poster de conférence hal-03343668v1
Dynamic follow-up of a Kombucha fermentation Océane Savary,Anne Thierry,Jérôme Mounier,Elisabeth Poirier,Marie-Bernadette Maillardet al. 8. Congress of European Microbiologists, Jul 2019, Glasgow, United Kingdom. , 2019 Poster de conférence hal-02294944v1
Microbial diversity of Pélardon, an artisanal raw goat milk cheese Marine Penland,Monika Coton,Jérôme Mounier,Sandrine Parayre,Emmanuel Cotonet al. 22ème édition du colloque du Club des Bactéries Lactiques, Jun 2019, Caen, France. , 2019 Poster de conférence hal-02159613v1
Microbial diversity of Pélardon, an artisanal raw goat milk cheese Marine Penland,Monika Coton,Jérôme Mounier,Sandrine Parayre,Hélène Falentinet al. FEMS – 8th Congress of European Microbiologists, Jul 2019, Glasgow, United Kingdom Poster de conférence hal-03344166v1
Microbial diversity of Pélardon,an artisanal raw goat milk cheese Marine Penland,Monika Coton,Jerome Mounier,Sandrine Parayre,Emmanuel Cotonet al. 14.congrès national de la Société Française de Microbiologie (SFM), Oct 2018, Paris, France. , 2018 Poster de conférence hal-01892951v1
PROMEDFOODS : Promouvoir les aliments fermentés méditerranéens grâce à une meilleure connaissance de leur diversité microbienne Marine Penland,Stéphanie-Marie Deutsch,Hélène Falentin,Emmanuel Coton,Jérôme Mounieret al. Colloque de l'AFEM (Association française d'écologie microbienne), Oct 2017, Camaret-sur-Mer, France. Actes du Colloque de l'AFEM Poster de conférence hal-03343657v1
Insights into Penicillium roqueforti morphological, genetic and functional diversity Guillaume Gillot,Monika Coton,Jean-Luc Lany,Marie-Bernadette Maillard,Gaëtan Le Flochet al. IDF World Dairy Summit 2015, Sep 2015, Vilnius, Lithuania. , 2015 Poster de conférence hal-01454527v1
Microbiological control of air and surfaces in ventilation networks in agri-food companies C. Denis,Y. Chamaret,C. Compagnon,S. Lemonnier,Monika Cotonet al. Société Française de Microbiologie, Jun 2010, Marseille, France. 2010 Poster de conférence hal-02596131v1
Biodiversité intraspécifique chez Oenococcus oeni Julen Bridier,Olivier Claisse,Monika Coton,Cécile Desmarais,Cecile Miot-Sertieret al. 17. Colloque du Club des Bactéries Lactiques, Oct 2010, Nancy, France. , 2 p., 2010 Poster de conférence hal-02824648v1
Rapid identification of the three species of dairy obligate heterofermenters Lactobacillus brevis, Lactobacillus fermentum and Lactobacillus parbuchneri by species-specific PCR Monika Coton,Françoise Berthier,Emmanuel Coton 7. Congrès de la Société Française de Microbiologie, May 2007, Nantes, France. 1 p., 2007 Poster de conférence hal-02813959v1