Muriel Joly

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Publications

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Ideas and perspectives: Microorganisms in the air through the lenses of atmospheric chemistry and microphysics

Barbara Ervens , Pierre Amato , Kifle Aregahegn , Muriel Joly , Amina Khaled et al.
Biogeosciences, 2025, 22 (1), pp.243-256. ⟨10.5194/egusphere-2024-2377⟩
Article dans une revue hal-04789117 v1

Culturable bacteria in clouds at Réunion, tropical island

Thomas Charpentier , Muriel Joly , Céline Judon , Martine Sancelme , Magali Abrantes et al.
Aerobiologia, 2024, 40 (2), pp.297-302. ⟨10.1007/s10453-024-09819-9⟩
Article dans une revue hal-04729278 v1
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Comparative analysis of bacterial diversity in clouds and aerosols

Raphaëlle Péguilhan , Florent Rossi , Olivier Rué , Muriel Joly , Pierre Amato
Atmospheric Environment, 2023, 298, pp.119635. ⟨10.1016/j.atmosenv.2023.119635⟩
Article dans une revue hal-04042603 v1
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Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France

Domitille Jarrige , Thierry Nadalig , Muriel Joly , Martine Sancelme , Stéphane Vuilleumier et al.
Microbiology Resource Announcements, 2022, ⟨10.1128/mra.00684-22⟩
Article dans une revue hal-03806374 v1
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Insights into tropical cloud chemistry in Réunion (Indian Ocean): results from the BIO-MAÏDO campaign

Pamela Dominutti , Pascal Renard , Mickaël Vaïtilingom , Angelica Bianco , Jean-Luc Baray et al.
Atmospheric Chemistry and Physics, 2022, 22 (1), pp.505-533. ⟨10.5194/acp-22-505-2022⟩
Article dans une revue hal-03543373 v1
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High-quality genome of the basidiomycete yeast Dioszegia hungarica PDD-24b-2 isolated from cloud water

Domitille Jarrige , Sajeet Haridas , Claudine Bleykasten-Grosshans , Muriel Joly , Thierry Nadalig et al.
G3, 2022, 12 (12), pp.jkac282. ⟨10.1093/g3journal/jkac282⟩
Article dans une revue hal-04300418 v1
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Biotic and abiotic transformation of amino acids in cloud water: experimental studies and atmospheric implications

Saly Jaber , Muriel Joly , Maxence Brissy , Martin Leremboure , Amina Khaled et al.
Biogeosciences, 2021, 18 (3), pp.1067-1080. ⟨10.5194/bg-18-1067-2021⟩
Article dans une revue hal-03145507 v1
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Effects of sulfonamide antibiotics on aquatic microbial community composition and functions

Martin Paumelle , Florence Donnadieu , Muriel Joly , Pascale Pascale Besse, P. Besse-Hoggan Besse-Hoggan , Joan Artigas
Environment International, 2021, 146, pp.106198. ⟨10.1016/j.envint.2020.106198⟩
Article dans une revue hal-03037638 v1
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Seasonal shift in airborne microbial communities

Romie Tignat-Perrier , Aurélien Dommergue , Alban Thollot , Olivier Magand , Pierre Amato et al.
Science of the Total Environment, 2020, 716, pp.137129. ⟨10.1016/j.scitotenv.2020.137129⟩
Article dans une revue hal-02481717 v1
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Cézeaux-Aulnat-Opme-Puy De Dôme: a multi-site for the long-term survey of the tropospheric composition and climate change

Jean-Luc Baray , Laurent Deguillaume , Aurélie Colomb , Karine Sellegri , Evelyn Freney et al.
Atmospheric Measurement Techniques, 2020, 13 (6), pp.3413-3445. ⟨10.5194/amt-13-3413-2020⟩
Article dans une revue hal-02883526 v1
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Metatranscriptomic exploration of microbial functioning in clouds

Pierre Amato , Ludovic Besaury , Muriel Joly , Benjamin Penaud , Laurent Deguillaume et al.
Scientific Reports, 2019, 9 (1), pp.4383. ⟨10.1038/s41598-019-41032-4⟩
Article dans une revue hal-02098642 v1
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Methods to Investigate the Global Atmospheric Microbiome

Aurélien Dommergue , Pierre Amato , Romie Tignat-Perrier , Olivier Magand , Alban Thollot et al.
Frontiers in Microbiology, 2019, 10, pp.243. ⟨10.3389/fmicb.2019.00243⟩
Article dans une revue hal-02122072 v1

Assessing extracellular enzymatic activities of biofilms on natural and standardized organic substrata immersed in a stream

M. Joly , Clarisse Mallet , J. Artigas
Aquatic Microbial Ecology, In press, ⟨10.3354/ame01914⟩
Article dans une revue hal-02168138 v1
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Biodegradation and toxicity of a maize herbicide mixture: mesotrione, nicosulfuron and S-metolachlor

Louis Carles , Muriel Joly , Frédérique Bonnemoy , Martin Leremboure , Florence Donnadieu et al.
Journal of Hazardous Materials, 2018, 354, pp.42 - 53. ⟨10.1016/j.jhazmat.2018.04.045⟩
Article dans une revue hal-01785204 v1
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Active microorganisms thrive among extremely diverse communities in cloud water

Pierre Amato , Muriel Joly , Ludovic Besaury , Anne Oudart , Najwa Taïb et al.
PLoS ONE, 2017, 12 (8), ⟨10.1371/journal.pone.0182869⟩
Article dans une revue hal-01598571 v1

Identification of sulfonylurea biodegradation pathways enabled by a novel nicosulfuron-transforming strain Pseudomonas fluorescens SG-1: toxicity assessment and effect of formulation.

Louis Carles , Muriel Joly , Frédérique Bonnemoy , Martin Leremboure , Isabelle Batisson et al.
Journal of Hazardous Materials, 2017, 324, pp.184-193. ⟨10.1016/j.jhazmat.2016.10.048⟩
Article dans une revue hal-01543326 v1

Biotransformation of herbicides by aquatic microbial communities associated to submerged leaves.

Louis Carles , Florent Rossi , Muriel Joly , Pascale Pascale Besse, P. Besse-Hoggan Besse-Hoggan , Isabelle Batisson et al.
Environmental Science and Pollution Research, 2017, 24, pp.3664-3674. ⟨10.1007/s11356-016-8035-9⟩
Article dans une revue hal-01546123 v1

Mesotrione Herbicide: Efficiency, Effects, and Fate in the Environment after 15 Years of Agricultural Use

Louis Carles , Muriel Mourguy Joly , Pierre Joly
CLEAN - Soil, Air, Water, 2017, 45 (9), pp.1700011. ⟨10.1002/clen.201700011⟩
Article dans une revue (article de synthèse) hal-01770298 v1
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Functional and structural characterization of two Bacillus megaterium nitroreductases biotransforming the herbicide mesotrione.

Louis Carles , Pascale Pascale Besse, P. Besse-Hoggan Besse-Hoggan , Muriel Joly , Armelle Vigouroux , Solange Moréra et al.
Biochemical Journal, 2016, 473 (10), pp.1443-1453. ⟨10.1042/BJ20151366⟩
Article dans une revue hal-01457189 v1

Siderophores in Cloud Waters and Potential Impact on Atmospheric Chemistry: Production by Microorganisms Isolated at the Puy de Dôme Station.

Virginie Vinatier , Nolwenn Wirgot , Muriel Mourguy Joly , Martine Sancelme , Magali Abrantes et al.
Environmental Science and Technology, 2016, 50, pp.9315-9323. ⟨10.1021/acs.est.6b02335⟩
Article dans une revue hal-01362537 v1

Survival of microbial isolates from clouds toward simulated atmospheric stress factors.

Muriel Mourguy Joly , Pierre Amato , Martine Sancelme , Virginie Vinatier , Magali Abrantes et al.
Atmospheric environment, 2015, 117, pp.92-98. ⟨10.1016/j.atmosenv.2015.07.009⟩
Article dans une revue hal-01206712 v1
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Survival and ice nucleation activity of bacteria as aerosol in a cloud simulation chamber.

Pierre Amato , Muriel Mourguy Joly , C. Schaupp , Eléonore Attard , Ottmar Möhler et al.
Atmospheric Chemistry and Physics, 2015, 15 (11), pp.4055-4082. ⟨10.5194/acp-15-6455-2015⟩
Article dans une revue hal-01206705 v1
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Quantification of ice nuclei active at near 0°C temperatures in low-altitude clouds at the Puy de Dôme atmospheric station

Muriel Mourguy Joly , Pierre Amato , Laurent Deguillaume , Marie Monier , C. Hoose et al.
Atmospheric Chemistry and Physics, 2014, 14, pp.8185-8195. ⟨10.5194/acp-14-8185-2014⟩
Article dans une revue hal-01898958 v2

Soil surface colonization by phototrophic indigenous organisms, in two contrasted soils treated by formulated maize herbicide mixtures

Pierre Joly , Benjamin Misson , Fanny Perrière , Frédérique Bonnemoy , Muriel Joly et al.
Ecotoxicology, 2014, 23 (9), pp.1648 - 1658. ⟨10.1007/s10646-014-1304-9⟩
Article dans une revue hal-01826038 v1
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Classification of clouds sampled at the puy de Dôme (France) from 10-year monitoring: Mean features of their physico-chemical properties.

Laurent Deguillaume , Tiffany Charbouillot , Muriel Mourguy Joly , Mickaël Vaïtilingom , Marius Parazols et al.
Atmospheric Chemistry and Physics, 2014, 14 (3), pp.1485-1506. ⟨10.5194/acp-14-1485-2014⟩
Article dans une revue hal-00951283 v1
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An unknown oxidative metabolism substantially contributes to soil CO2 emissions

Vincent Maire , Gaël Alvarez , J Colombet , Aurélie Comby , Romain Despinasse et al.
Biogeosciences, 2013, 10, pp.1155-1167. ⟨10.5194/bg-10-1155-2013⟩
Article dans une revue hal-01190438 v1

Ice nucleation activity of bacteria isolated from cloud water

Muriel Mourguy Joly , Eléonore Attard , Martine Sancelme , Laurent Deguillaume , Caroline Guilbaud et al.
Atmospheric Environment, 2013, 70, pp.392 - 400. ⟨10.1016/j.atmosenv.2013.01.027⟩
Article dans une revue istex hal-02650034 v1
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An unknown respiration pathwaysubstantially contributes to soil CO2 emissions.

Vincent V. Maire , Gaël Alvarez , J J. Colombet , Aurélie A. Comby , Romain R. Despinasse et al.
Biogeosciences Discussions, 2012, 9, pp.8663-8691
Article dans une revue hal-00964427 v1

Chemical and biological signatures of water and fluxes from clouds to rivers at the watershed level in a natural context.

Tiphaine Labed-Veydert , Muriel Joly , Céline Judon , Martin Leremboure , Guillaume Voyard et al.
EGU General Assembly, Apr 2023, Vienna (AUSTRIA), Austria. ⟨10.5194/egusphere-egu23-6760⟩
Communication dans un congrès hal-04149910 v1

Clouds boost microbial activity in the atmosphere

Pierre Amato , Raphaëlle Péguilhan , Florent Rossi , Muriel Joly , Jean-Luc Baray et al.
EGU General Assembly, Apr 2023, Vienna (Austria), Austria. ⟨10.5194/egusphere-egu23-5151⟩
Communication dans un congrès hal-04149919 v1

Metabolic response of Microbacterium sp. C448 exposed to environmental and medicinal concentrations of sulfamethazine antibiotic

Laurianne Paris , Muriel Joly , Marion Devers-Lamrani , Nadine Rouard , Didier Viala et al.
EcotoxicoMic 2020, 2nd International Conference on Microbial Ecotoxicology, Oct 2020, Montpellier, France
Communication dans un congrès hal-03038484 v1

Biofilm interactions can modulate microbial decomposer responses to antibiotics

Martin Paumelle , Florence Donnadieu , Muriel Joly , Joan Artigas , Pascale Pascale Besse, P. Besse-Hoggan Besse-Hoggan
30th Annual Meeting SETAC Europe,, May 2020, Dublin, Ireland
Communication dans un congrès hal-03038383 v1

Potentiel role of the cloud microbiota in atmospheric chemistry.

A.-M. Delort , Laurent Deguillaume , P. Amato , N. Wirgot , V. Vinatier et al.
Colloque sur la Chimie Atmosphérique, Jun 2019, Lyon, France
Communication dans un congrès hal-02288855 v1

Capacity of leaf-associated microorganisms to biotransform pesticides in rivers

Louis Carles , Florent Rossi , Muriel Joly , Pascale Besse-Hoggan , Isabelle Batisson et al.
1st International Conference on Microbial Ecotoxicology (EcotoxicoMic), Nov 2017, Lyon, France
Communication dans un congrès hal-04174098 v1

Biotransformation et toxicité de mélanges de pesticides

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Armelle Vigouroux , Solange Moréra et al.
3èmes Journées d'Ecotoxicologie microbienne (EcotoxicoMic), Mar 2016, Valence TGV, France
Communication dans un congrès hal-04174082 v1

Herbicide mixture: biotransformation pathway and toxicity

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Frédérique Bonnemoy , Isabelle Batisson
9th European Conference on Pesticides and Related Organic Micropollutants in the Environment, 15th Symposium on Chemistry and Fate of Modern Pesticides, Oct 2016, Santiago De Compostela, Espagne
Communication dans un congrès hal-04174092 v1

NfsA-FRP nitroreductase enzyme family: a new tool to link biotransformation pathways and environmental contamination by mesotrione, a beta-triketone herbicide

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Armelle Vigouroux , Solange Moréra et al.
Society of Environmental Toxicology and Chemistry (SETAC), May 2016, Nantes, France
Communication dans un congrès hal-04174089 v1

Première description d’enzymes impliquées dans la biodégradation de l’herbicide mésotrione : les nitroréductases NfrA1 et NfrA2 de Bacillus megaterium Mes11

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Isabelle Batisson
7ème colloque de l’Association Francophone d’Ecologie Microbienne (AFEM), Nov 2015, Anglet, France
Communication dans un congrès hal-04174079 v1

Étude des noyaux glaçogènes microbiens dans l'eau de nuage au Puy de Dôme (France)

Muriel Mourguy Joly , Pierre Amato , Laurent Deguillaume , Eléonore Attard , Corinna Hoose et al.
MicrobAERO 2013, Université Blaise Pascal, Oct 2013, La Bourboule, France
Communication dans un congrès hal-02750330 v1

Biological ice nucleation activity in cloud water

Muriel Joly , Pierre Amato , Laurent Deguillaume , Eléonore Attard , Cindy E. Morris et al.
32. AAAR Annual conference, American Association for Aerosol Research., Sep 2013, Portland, Oregon, United States
Communication dans un congrès hal-02806971 v1
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Twenty years of elucidating diversity and function of cloudborne microorganisms: from lab studies to biotechnological applications

Muriel Joly , Mariline Theveniot , Frédéric Mathonat , Raphaëlle Peguilhan , Florent Rossi et al.
Microbes 2024, Oct 2024, Lille, France
Poster de conférence hal-04858048 v1

Exploring metabolic acclimation of the cloud microflora to contrasting summer day and winter night conditions using metatranscriptomics and fluxomics approaches

Muriel Joly , Domitille Jarrige , Jonathan Vyscocil , Florent Rossi , Céline Judon et al.
EGU General Assembly, Apr 2023, Vienna (Austria), Austria. 2023, ⟨10.5194/egusphere-egu23-6196⟩
Poster de conférence hal-04150031 v1

Transcriptomic and proteomic responses of Microbacterium sp. C448 exposed to sulfamethazine antibiotic

Laurianne Paris , Marion Devers-Lamrani , Muriel Joly , Didier Viala , Marie De Antonio et al.
EcotoxicoMic 2022, 3rd international conference on Microbial Ecotoxicology, Nov 2022, Montpellier, France
Poster de conférence hal-04095714 v1

Réponse métabolique de Microbacterium sp. C448 exposé à des concentrations environnementale et médicale de l’antibiotique sulfaméthazine.

Laurianne Paris , Muriel Joly , Marion Devers-Lamrani , Nadine Rouard , Didier Viala et al.
10ème colloque de l’AFEM, Nov 2021, MARSEILLE, France
Poster de conférence hal-03416982 v1

Comparison of microbial colonization between natural and plastic substrata in a contaminated watershed

Lucie Laffet , Muriel Joly , Louis Carles , Anna Maria Romaní , Joan Artigas
1st international webinar of young microbial ecotoxicology researchers (EcotoxicoMic YR), Nov 2021, Virtual conference, France
Poster de conférence hal-04174584 v1

Metabolic response of Microbacterium sp. C448 exposed to environmental and medicinal concentrations of sulfamethazine antibiotic

Laurianne Paris , Muriel Joly , Marion Devers-Lamrani , Nadine Rouard , Didier Viala et al.
Society of Environmental Toxicology and Chemistry (SETAC), May 2020, Dublin, Ireland
Poster de conférence hal-03243435 v1

Plastic contaminants in streams: new substrates for microbial activity?

Muriel Joly , Louis Carles , Florent Rossi , Clarisse Mallet , Joan Artigas
19th European Meeting on Environmental Chemistry (EMEC19). Association of Chemistry and the Environment (ACE), Dec 2018, Royat, France
Poster de conférence hal-04174536 v1

Herbicide mixture of mesotrione, nicosulfuron and S-metolachlor: biotransformation pathway and toxicity

Louis Carles , Muriel Joly , Frédérique Bonnemoy , Martin Leremboure , Florence Donnadieu et al.
1st International Conference on Microbial Ecotoxicology (EcotoxicoMic), Nov 2017, Lyon, France
Poster de conférence hal-04174320 v1

Biotransformation of three maize herbicides by aquatic microbial communities associated to submerged leaf litter

Louis Carles , Florent Rossi , Muriel Joly , Pascale Besse-Hoggan , Isabelle Batisson et al.
4th Biofilm Workshop, Apr 2016, Girona, Spain
Poster de conférence hal-04174298 v1

Mélanges d’herbicides : étude des voies de biotransformation et détermination de la toxicité des métabolites

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Armelle Vigouroux , Solange Moréra et al.
46ème congrès du Groupe Français des Pesticides (GFP), May 2016, Versailles, France
Poster de conférence hal-04174301 v1

Complementary chemical and biological approaches to study mesotrione biodegradation pathway by the edaphic Bacillus megaterium strain Mes11: first identification and characterization of degrading enzymes

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Isabelle Batisson
15th Pesticide Symposium on Pesticide Chemistry, Sep 2015, Piacenza, Italy
Poster de conférence hal-04174290 v1

New insights into the biodegradation of β-triketone herbicides: role of nitroreductase enzymes in mesotrione transformation

Louis Carles , Pascale Besse-Hoggan , Muriel Joly , Isabelle Batisson
15th EuCheMS International Conference on Chemistry and the Environment (ICCE), Sep 2015, Leipzig, Germany
Poster de conférence hal-04174293 v1

TRICETOX : Etude de l’impact environnemental des herbicides β-tricétones synthétiques et naturels

Christophe Calvayrac , Emilie Rocaboy-Faquet , Sana Romdhane , Marion Devers-Lamrani , Fabrice Martin-Laurent et al.
45ème congrès du Groupe Français des Pesticides (GFP), May 2015, Versailles, France
Poster de conférence hal-04174287 v1

Clouds: a transient and stressing habitat for microorganisms.

A.- M. Delort , Mickaël Vaïtilingom , M. Joly , P. Amato , N. Wirgot et al.
C. Chénard, F. M. Lauro. Microbial Ecology of Extreme Environments, Springer, pp.215-245, 2017
Chapitre d'ouvrage hal-01659419 v1

Cloud Microorganisms and their Potential Implication in Atmospheric Chemistry

Muriel Joly , Laurent Deguillaume , Mickaël Vaitilingom , Yoann Long , Virginie Vinatier et al.
Marta Thelin; Julienne Maheux. Clouds: Classification, Microbiology and Environmental Effects, Nova Science Pub Inc., pp.1-46, 2013, 978-1624178566
Chapitre d'ouvrage hal-00951139 v1
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Interactions microorganismes-nuage : activité glaçogène et survie

Muriel Mourguy Joly
Microbiologie et Parasitologie. Université Blaise Pascal (Clermont Ferrand 2), 2013. Français. ⟨NNT : ⟩
Thèse tel-01589964 v1
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Interactions microorganismes-nuage : activité glaçogène et survie

Muriel Mourguy Joly
Autre. Université Blaise Pascal - Clermont-Ferrand II, 2013. Français. ⟨NNT : 2013CLF22424⟩
Thèse tel-01136212 v1