Nils Paulhe

23

Documents

Publications

	FragHub: A Mass Spectral Library Data Integration Workflow Axel Dablanc , Solweig Hennechart , Amélie Perez , Guillaume Cabanac , Yann Guitton Analytical Chemistry, 2024, 96 (30), pp.12489-12496. ⟨10.1021/acs.analchem.4c02219⟩ Journal articles hal-04721713v1
	Challenges and perspectives for naming lipids in the context of lipidomics Michael Witting , Adnan Malik , Andrew Leach , Alan Bridge , Lucila Aimo Metabolomics, 2024, 20 (1), pp.15. ⟨10.1007/s11306-023-02075-x⟩ Journal articles hal-04596970v1
	Suggesting disease associations for overlooked metabolites using literature from metabolic neighbors Maxime Delmas , Olivier Filangi , Christophe Duperier , Nils Paulhe , Florence Vinson GigaScience, 2023, 12, pp.giad065. ⟨10.1093/gigascience/giad065⟩ Journal articles hal-04223426v1
	PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management Nils Paulhe , Cécile Canlet , Annelaure Damont , Lindsay Peyriga , Stéphanie Durand Metabolomics, 2022, 18 (6), pp.40. ⟨10.1007/s11306-022-01899-3⟩ Journal articles hal-03695453v1
	FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases Maxime Delmas , Olivier Filangi , Nils Paulhe , Florence Vinson , Christophe Duperier Bioinformatics, 2021, 37 (21), pp.3896-3904. ⟨10.1093/bioinformatics/btab627⟩ Journal articles hal-03361495v1
	A computational solution to automatically map metabolite libraries in the context of genome scale metabolic networks Benjamin Merlet , Nils Paulhe , Florence Vinson , Clément Frainay , Maxime Chazalviel Frontiers in Molecular Biosciences, 2016, 3, ⟨10.3389/fmolb.2016.00002⟩ Journal articles hal-02631089v1
	Metavir: a web server dedicated to virome analysis. Simon Roux , Michaël Faubladier , Antoine Mahul , Nils Paulhe , Aurélien Bernard Bioinformatics, 2011, 27 (21), pp.3074-5. ⟨10.1093/bioinformatics/btr519⟩ Journal articles hal-00841495v1

	Phénotypage multidimensionnel: intérêt de l’outil HDeeP Cécile Gladine , Nils Paulhe , Estelle Pujos-Guillot , Claire Sulmont-Rossé , Sophie Layé 6ème Assises régionales de Nutrition Santé, Oct 2024, Grenoble, France Conference papers hal-04817167v1
	New developments for the database PhytoHub 2.0 on plant food bioactives: Health effects and analytics for metabolomics Mariem Achour , Franck Giacomoni , Letizia Bresciani , Danièle del Rio , Giuseppe Di Pede 3rd International Conference on ood Bioactives and Health - FBHC2023, Jun 2022, Parma, Italy Conference papers hal-04793068v1
	PeakForest: a spectral reference database made from metabolomic experts for metabolomic analyses Nils Paulhe , Pierrick Roger , Marie-Françoise Olivier , Marie Lefebvre , Christophe Duperier 9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France Conference papers hal-02742965v1

	Optimization of metabolome extraction procedures and implementation of a PeakForest database for the identification of microorganisms compounds by LC-HRMS Wiam Mansouri , Cyril C. Jousse , Marie Lagrée , Nils Paulhe , Binta Diémé Analytics 2022, Sep 2022, Nantes, France Conference poster hal-03879175v1
	Update on technological developments and opportunities with Workflow4Metabolomics Lain Pavot , Mélanie Pétéra , Nils Paulhe , Yann Guitton , Gildas Le Corguillé Analytics 2022, Sep 2022, Nantes, France. Conference poster hal-03776462v1
	Metabolite reporting in large-scale studies within different metabolomics communities: DO WE SPEAK THE SAME LANGUAGE? Ghina Hajjar , David Benaben , Nils Paulhe , Christophe Duperier , Olivier Filangi Analytics 2022, Sep 2022, Nantes, France Conference poster hal-03775474v1
	Developments and opportunities with Workflow4Metabolomics Lain Pavot , Mélanie Pétéra , Nils Paulhe , Yann Guitton , Gildas Le Corguillé Analytics 2022, Sep 2022, Nantes, France Conference poster hal-03781084v1
	Untargeted metabolomic approach by GC-QTOF : From low to high resolution Carole Migné , Nils Paulhe , Yann Guitton , Franck Giacomoni , Mélanie Pétéra SMMAP 2017 (Spectrométrie de Masse, Métabolomique et Analyse Protéomique), Oct 2017, Marne-La-Vallée, France. , pp.476, 2017, SMMAP 2017-Livre des résumés Conference poster hal-01674479v1
	Enrichissement de la base de données spectrale peakforest en LC-MS Sylvain Emery , Bernard Lyan , Charlotte Joly , Nils Paulhe , Franck Giacomoni 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique, May 2016, Montpellier, France. 158 p., 2016, Livret des résumés 10JS RFMF Conference poster hal-01594987v1
	PeakForest: a spectral database and its toolbox, dedicated to the Metabolomics’ community Nils Paulhe , Christophe Duperier , Marie Lefebvre , Pierrick Roger-Mele , Christophe Junot 12. annual conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016 Conference poster hal-02744357v1
	New tools and workflows on W4M, the Galaxy metabolomic infrastructure Marion Landi , Claire Lopez , Marie Tremblay-Franco , Cécile Canlet , Yann Guitton 9e Journées scientifiques du RFMF, Jun 2015, Lille, France. , 2015 Conference poster hal-02743697v1
	Vers une annotation RMN 1D et 2D ciblée à partir de matrices de référence Marie Lefebvre , Julie Pinelli , Nils Paulhe , Vanessa Zhendre , Claire Lopez 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Conference poster hal-02743576v1
	PeakForest: a spectral reference database made from metabolomic experts for metabolomic analyses Nils Paulhe , Pierrick Roger , Marie-Françoise Olivier , Marie Lefebvre , Christophe Duperier 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Conference poster hal-02742964v1
	Spectral Database: from data model to web interface Nils Paulhe , Christophe Duperier , Daniel Jacob , Etienne Thévenot , Jean-Francois Martin 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 2014 Conference poster hal-02742064v1

	Suggesting disease associations for overlooked metabolites using literature from metabolic neighbours M. Delmas , O. Filangi , Christophe Duperier , N. Paulhe , F. Vinson 2023 Preprints, Working Papers, ... hal-04188519v1
	FORUM: Building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases Maxime Delmas , Olivier Filangi , Nils Paulhe , Florence Vinson , Christophe Duperier 2021 Preprints, Working Papers, ... hal-03318295v1