Olivier Chapleur

Documents

Current affiliations

Publications

	Generic role of zeolite in enhancing anaerobic digestion and mitigating diverse inhibitions: Insights from degradation performance and microbial characteristics Xiaoqing Wang , Vincent Dürr , Angéline Guenne , Laurent Mazéas , Olivier Chapleur Journal of Environmental Management, 2024, 356, pp.120676. ⟨10.1016/j.jenvman.2024.120676⟩ Journal articles hal-04528643v1
	Easy16S: a user-friendly Shiny web-service for exploration and visualization of microbiome data. Cédric Midoux , Olivier Rué , Olivier Chapleur , Ariane Bize , Valentin Loux Journal of Open Source Software, 2024, 9 (103), pp.6704. ⟨10.21105/joss.06704⟩ Journal articles hal-04785149v1
	A comprehensive dataset for assessing the impact of ammonium salts and zeolite on anaerobic digestion performance, microbial dynamics, and metabolomic profiles Stephany Damaris Campuzano Zagal , Xiaoqing Wang , Nadine Derlet , Angéline Guenne , Chrystelle Bureau Data in Brief, 2024, 54, pp.110357. ⟨10.1016/j.dib.2024.110357⟩ Journal articles hal-04625314v1
	Inhibition of anaerobic digestion by various ammonia sources resulted in subtle differences in metabolite dynamics Xiaoqing Wang , Stephany Campuzano , Angéline Guenne , Laurent Mazéas , Olivier Chapleur Chemosphere, 2024, 351, pp.141157. ⟨10.1016/j.chemosphere.2024.141157⟩ Journal articles hal-04528641v1
	Monitoring of cellulose-rich biowaste co-digestion with 3D fluorescence spectroscopy and mass spectrometry-based metabolomics Olivier Chapleur , Angéline Guenne , Douglas N Rutledge , Francesc Puig-Castellví Chemosphere, 2023, 349, pp.140824. ⟨10.1016/j.chemosphere.2023.140824⟩ Journal articles hal-04330239v1
	The electrochemical microbial tree: A new concept for wastewater treatment Morgane Hoareau , Luc Etcheverry , Olivier Chapleur , Chrystelle Bureau , Cédric Midoux Chemical Engineering Journal, 2023, 454 (3), pp.140295. ⟨10.1016/j.cej.2022.140295⟩ Journal articles hal-03851691v1
	Diversity of novel archaeal viruses infecting methanogens discovered through coupling of stable isotope probing and metagenomics Vuong Quoc Hoang Ngo , François Enault , Cédric Midoux , Mahendra Mariadassou , Olivier Chapleur Environmental Microbiology, 2022, ⟨10.1111/1462-2920.16120⟩ Journal articles hal-03727436v1
	Metataxonomics, metagenomics, metabolomics analysis of the influence of temperature modification in full-scale anaerobic digesters Francesc Puig-Castellví , Cédric Midoux , Angéline Guenne , Delphine Conteau , Oscar Franchi Bioresource Technology, 2022, 346, pp.126612. ⟨10.1016/j.biortech.2021.126612⟩ Journal articles hal-03507080v1
	Deterministic processes drive the microbial assembly during the recovery of an anaerobic digester after a severe ammonia shock Laëtitia Cardona , Laurent Mazéas , Olivier Chapleur Bioresource Technology, 2022, 347, pp.126432. ⟨10.1016/j.biortech.2021.126432⟩ Journal articles hal-03871174v1
	A longitudinal study of the effect of temperature modification in full-scale anaerobic digesters – dataset combining 16S rDNA gene sequencing, metagenomics, and metabolomics data Francesc Puig-Castellví , Cédric Midoux , Angéline Guenne , Delphine Conteau , Oscar Franchi Data in Brief, 2022, 41, pp.107960. ⟨10.1016/j.dib.2022.107960⟩ Journal articles hal-03585428v1
	Rearrangement of incomplete multi-omics datasets combined with ComDim for evaluating replicate cross-platform variability and batch influence Francesc Puig-Castellví , Delphine Jouan-Rimbaud Bouveresse , Laurent Mazéas , Olivier Chapleur , Douglas N. Rutledge Chemometrics and Intelligent Laboratory Systems, 2021, 218, pp.104422. ⟨10.1016/j.chemolab.2021.104422⟩ Journal articles hal-03469126v1
	Gradual development of ammonia-induced syntrophic acetate-oxidizing activities under mesophilic and thermophilic conditions quantitatively tracked using multiple isotopic approaches Liping Hao , Lu Fan , Olivier Chapleur , Angéline Guenne , Ariane Bize Water Research, 2021, 204, ⟨10.1016/j.watres.2021.117586⟩ Journal articles hal-03331143v1
	Oxygen-reducing bidirectional microbial electrodes designed in real domestic wastewater Morgane Hoareau , Benjamin Erable , Olivier Chapleur , Cédric Midoux , Chrystelle Bureau Bioresource Technology, 2021, 326, pp.0. ⟨10.1016/j.biortech.2021.124663⟩ Journal articles hal-03129147v1
	Zeolite favours propionate syntrophic degradation during anaerobic digestion of food waste under low ammonia stress Laëtitia Cardona , Laurent Mazéas , Olivier Chapleur Chemosphere, 2021, 262, pp.127932. ⟨10.1016/j.chemosphere.2020.127932⟩ Journal articles hal-03344673v1
	Time-course analysis of metabolomic and microbial responses in anaerobic digesters exposed to ammonia Olivier Chapleur , Simon Poirier , Angéline Guenne , Kim-Anh Le Cao Chemosphere, 2021, 283, pp.131309. ⟨10.1016/j.chemosphere.2021.131309⟩ Journal articles hal-03479331v1
	Assessment of the microbial interplay during anaerobic co-digestion of wastewater sludge using common components analysis Francesc Puig-Castellví , Laëtitia Cardona , Delphine Jouan-Rimbaud Bouveresse , Christophe Cordella , Laurent Mazéas PLoS ONE, 2020, 15 (5), pp.e0232324. ⟨10.1371/journal.pone.0232324⟩ Journal articles hal-03040625v1
	Integrating independent microbial studies to build predictive models of anaerobic digestion inhibition by ammonia and phenol Simon Poirier , Sébastien Dejean , Cédric Midoux , Kim-Anh Lê Cao , Olivier Chapleur Bioresource Technology, 2020, 316, pp.123952. ⟨10.1016/j.biortech.2020.123952⟩ Journal articles hal-02907466v1
	Assessment of substrate biodegradability improvement in anaerobic Co-digestion using a chemometrics-based metabolomic approach Francesc Puig-Castellví , Laëtitia Cardona , Delphine Jouan-Rimbaud Bouveresse , Christophe Cordella , Laurent Mazéas Chemosphere, 2020, 254, pp.77-87. ⟨10.1016/j.chemosphere.2020.126812⟩ Journal articles hal-03040735v1
	Effect of ammonia exposure and acclimation on the performance and the microbiome of anaerobic digestion Francesc Puig-Castellví , Laëtitia Cardona , Chrystelle Bureau , Delphine Jouan-Rimbaud Bouveresse , Christophe Cordella Bioresource Technology Reports, 2020, 11, pp.100488. ⟨10.1016/j.biteb.2020.100488⟩ Journal articles hal-03040710v1
	Integrative Analyses to Investigate the Link between Microbial Activity and Metabolite Degradation during Anaerobic Digestion Laëtitia Cardona , Kim-Anh Lê Cao , Francesc Puig-Castellví , Chrystelle Bureau , Céline Madigou Journal of Proteome Research, 2020, 19 (10), pp.3981-3992. ⟨10.1021/acs.jproteome.0c00251⟩ Journal articles hal-03176525v1
	A Generic Multivariate Framework for the Integration of Microbiome Longitudinal Studies With Other Data Types Antoine Bodein , Olivier Chapleur , Arnaud Droit , Kim-Anh Lê Cao Frontiers in Genetics, 2019, 10, ⟨10.3389/fgene.2019.00963⟩ Journal articles hal-02965169v1
	Co-digestion of wastewater sludge: choosing the optimal blend Laëtitia Cardona , Camille Levrard , Angéline Guenne , Olivier Chapleur , Laurent Mazéas Waste Management, 2019, 87, pp.772-781. ⟨10.1016/j.wasman.2019.03.016⟩ Journal articles hal-02547814v1
	Influence of support media supplementation to reduce the inhibition of anaerobic digestion by phenol and ammonia: Effect on degradation performances and microbial dynamics Simon Poirier , Olivier Chapleur Data in Brief, 2018, 19, pp.1733-1754. ⟨10.1016/j.dib.2018.06.071⟩ Journal articles hal-03871203v1
	Ecological consequences of abrupt temperature changes in anaerobic digesters Céline Madigou , Kim-Anh Lê Cao , Chrystelle Bureau , Laurent Mazeas , Sébastien Dejean Chemical Engineering Journal, 2018, 361, pp.266-277. ⟨10.1016/j.cej.2018.12.003⟩ Journal articles hal-01960217v1
	Support media can steer methanogenesis in the presence of phenol through biotic and abiotic effects Simon Poirier , Sébastien Dejean , Olivier Chapleur Water Research, 2018, 140, pp.24 - 33. ⟨10.1016/j.watres.2018.04.029⟩ Journal articles hal-01890001v1
	Inhibition of anaerobic digestion by phenol and ammonia: Effect on degradation performances and microbial dynamics Simon Poirier , Olivier Chapleur Data in Brief, 2018, 19, pp.2235-2239. ⟨10.1016/j.dib.2018.06.119⟩ Journal articles hal-03871198v1
	Characterization of a combined batch-continuous procedure for the culture of anammox biomass R. Connan , P. Dabert , S. Le Roux , O. Chapleur , G. Bridoux Ecological Engineering, 2017, 106, pp.231-241. ⟨10.1016/j.ecoleng.2017.06.003⟩ Journal articles hal-02606365v1
	Improving anaerobic digestion with support media: Mitigation of ammonia inhibition and effect on microbial communities Simon Poirier , Céline Madigou , T. Bouchez , O. Chapleur Bioresource Technology, 2017, 235, pp.229-239. ⟨10.1016/j.biortech.2017.03.099⟩ Journal articles hal-02607552v1
	Anaerobic digestion of biowaste under extreme ammonia concentration: Identification of key microbial phylotypes S. Poirier , Elie Desmond-Le Quéméner , C. Madigou , T. Bouchez , O. Chapleur Bioresource Technology, 2016, 207, pp.92-101. ⟨10.1016/j.biortech.2016.01.124⟩ Journal articles hal-02604542v1
	Community shifts within anaerobic digestion microbiota facing phenol inhibition: Towards early warning microbial indicators? S. Poirier , A. Bize , C. Bureau , T. Bouchez , O. Chapleur Water Research, 2016, 100, pp.296-305. ⟨10.1016/j.watres.2016.05.041⟩ Journal articles hal-02604543v1
	Acclimation strategy to increase phenol tolerance of an anaerobic microbiota C. Madigou , S. Poirier , C. Bureau , O. Chapleur Bioresource Technology, 2016, 216, pp.77-86. ⟨10.1016/j.biortech.2016.05.045⟩ Journal articles hal-02604283v1
	Increasing concentrations of phenol progressively affect anaerobic digestion of cellulose and associated microbial communities O. Chapleur , Céline Madigou , Raphaël Civade , Yohan Rodolphe , Laurent Mazéas Biodegradation, 2016, 27 (1), pp.15-27. ⟨10.1007/s10532-015-9751-4⟩ Journal articles hal-02604713v1
	New insights into the key microbial phylotypes of anaerobic sludge digesters under different operational conditions Liping Hao , Ariane Bize , Delphine Conteau , O. Chapleur , Sophie Courtois Water Research, 2016, 102 (octobre), pp.158-169. ⟨10.1016/j.watres.2016.06.014⟩ Journal articles hal-01602845v1
	Asymmetrical response of anaerobic digestion microbiota to temperature changes O. Chapleur , L. Mazeas , Jean-Jacques Godon , T. Bouchez Applied Microbiology and Biotechnology, 2015, 100 (3), pp.13. ⟨10.1007/s00253-015-7046-7⟩ Journal articles hal-02602033v1
	Metaproteomics of cellulose methanisation under thermophilic conditions reveals a surprisingly high proteolytic activity Fan Lue , Ariane Bize , Alain Guillot , Veronique Monnet , Céline Madigou The International Society of Microbiologial Ecology Journal, 2014, 8 (1), pp.88-102. ⟨10.1038/ismej.2013.120⟩ Journal articles hal-01204297v1
	Co-inoculating ruminal content neither provides active hydrolytic microbes nor improves methanization of (13) C-cellulose in batch digesters O. Chapleur , Ariane Bize , Thibaut Serain , Laurent Mazéas , T. Bouchez FEMS Microbiology Ecology, 2014, 87 (3), pp.616-619. ⟨10.1111/1574-6941.12249⟩ Journal articles hal-02598975v1
	SIMSISH technique does not alter the apparent isotopic composition of bacterial cells O. Chapleur , Ting-Di Wu , Jean-Luc Guerquin-Kern , Laurent Mazéas , T. Bouchez PLoS ONE, 2013, 8 (10), 8 p. ⟨10.1371/journal.pone.0077522⟩ Journal articles hal-00937599v1

	Analysis of incomplete multi-block datasets by ComDim Francesc Puig-Castellví , Delphine Jouan-Rimbaud Bouveresse , Laurent Mazéas , Olivier Chapleur , Douglas N. D.N. Rutledge Chimiométrie 2022, Jun 2022, Brest, France Conference papers hal-04231727v1
	Characterization of virus-host dynamics in anaerobic digesters under abiotic stress Marion Coves , Laurent Mazéas , Olivier Chapleur , Cédric Midoux , Ludwig E Jardillier 17e Congrès National de la Société Française de Microbiologie, Société Française de Microbiologie, Oct 2022, Montpellier, France Conference papers hal-04356630v1
	Diversity of novel viruses infecting methanogenic archaea, discovered through coupling of stable isotope probing and metagenomics Hoang Ngo , François Enault , Cédric Midoux , Mahendra Mariadassou , Olivier Chapleur Phages in Paris, Phages.fr, Oct 2022, Paris, France Conference papers hal-04357012v1
	Implementation of a Nanopore metagenomic workflow for time-series of complex microbial communities: MAG catalog and functional annotation Cédric Midoux , Chrystelle Bureau , Baptiste Quentin , Olivier Chapleur Journée thématique du PEPI IBIS - Métagénomique, PEPI IBIS, Nov 2022, Dijon, France Conference papers hal-04229643v1
	Unraveling the microbial community interactions in anaerobic digesterswith common components analysis Francesc Puig-Castellví , Laëtitia Cardona , Olivier Chapleur , Christophe Cordella , Delphine Jouan-Rimbaud Bouveresse Chimiométrie 2019, Jan 2019, Montpellier, France Conference papers hal-02165420v1
	Growing concentrations of phenol increasingly modify microbial communities' dynamics and performances' stability of anaerobic digesters O. Chapleur , Raphaël Civade , Carolina Hoyos-Hernandez , Laurent Mazéas , T. Bouchez 13th World Congress on Anaerobic Digestion : Recovering (bio) Ressources for the World, Jun 2013, Santiago de Compostella, Spain Conference papers hal-01118701v1

	Inhibition of anaerobic digestion of urban sewage sludge by sodium propionate: biogas production and microbial community shift in continuous reactors Joel Awinzure Agumah , Xiaojun Liu , Laura André , Sophie Thibault , Camille Auneau 18th IWA World Conference On Anaerobic Digestion, Jun 2024, Istanbul, Turkey. 18th IWA World Conference on Anaerobic Digestion CONFERENCE PROCEEDINGS, 2024 Conference poster hal-04647882v1
	Deciphering the effect of propionic acid on anaerobic digestion of sludge: gas production and microbial community structure Chloé Soulard , Xiaojun Liu , André Pauss , Laura André , Thierry Ribeiro 18th IWA World Conference On Anaerobic Digestion, Jun 2024, Istanbul, Turkey. , 18th IWA World Conference on Anaerobic Digestion CONFERENCE PROCEEDINGS, 2024 Conference poster hal-04647849v1
	Characterization of virus-host dynamics in anaerobic digesters under abiotic stress Marion Coves , Laurent Mazéas , Olivier Chapleur , Cédric Midoux , Ludwig E Jardillier Viruses of Microbes, Jul 2022, Braga, Portugal. Conference poster hal-04356367v1
	Implementation of a Nanopore metagenomic workflow for time-series of complex microbial communities: MAG catalog and functional annotation. Cédric Midoux , Chrystelle Bureau , Baptiste Quentin , Olivier Chapleur MICROBES symposium, Sep 2022, Orsay, France. Conference poster hal-03765009v1
	Diversity of novel archaeal viruses infecting methanogens discovered through coupling of stable isotope probing and metagenomics Vuong Quoc Hoang Ngo , François Enault , Cédric Midoux , Mahendra Mariadassou , Olivier Chapleur ISME18, 18th International Symposium on Microbial Ecology, Aug 2022, Lausanne, Switzerland. Conference poster hal-04359643v1
	Assessment of the substrate biodegrability in anaerobic co-digestion using a metabolomic approach Francesc Puig-Castellví , Laëtitia Cardona , Delphine Jouan-Rimbaud Bouveresse , Christophe Cordella , Laurent Mazéas European RFMF Metabomeeting, Jan 2020, Toulouse, France Conference poster hal-04231789v1
	Chemometric analysis of a metagenomic dataset to decipher the functional role of the micrpbiota from anaerobic digesters Francesc Puig-Castellví , Cédric Midoux , Laëtitia Cardona , Olivier Chapleur , Delphine Conteau Chimiométrie 2020, Jan 2020, Liège, Belgium Conference poster hal-04231788v1
	A molecular ecology approach using Stable Isotope Probing and metagenomics to study viruses of methanogens' diversity Context Vuong Quoc Hoang Ngo , Maximilien Sotomski , Mart Krupovic , François Enault , Olivier Chapleur Phages in Grenoble, Oct 2019, Grenoble, France Conference poster hal-04360049v1
	Easy16S : a user-friendly Shiny interface for analysis and visualization of metagenomic data Cedric Midoux , Olivier Rué , Olivier Chapleur , Mahendra Mariadassou , Théodore Bouchez JOBIM 2018 : Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France. , 2018, JOBIM 2018 Conference poster hal-02737257v1
	Acclimation of an anaerobic microbiota subjected to inhibitory phenol concentration O. Chapleur , S. Poirier , C. Madigou 16th International Symposium on Microbial Ecology, Aug 2016, Montréal, Canada. 2016 Conference poster hal-02605556v1
	Enhancing anaerobic digestion of biowaste under extreme ammonia concentration with support media: identification of key microbial phylotypes S. Poirier , T. Bouchez , O. Chapleur 16th International Symposium on Microbial Ecology, Aug 2016, Montréal, Canada. pp.1, 2016 Conference poster hal-02604546v1
	Characterization of the acclimatization of an anaerobic microbiota subjected to inhibitory phenol concentration O. Chapleur , Simon Poirier , Céline Madigou MEWE and Biofilms IWA Specialist Conference, Sep 2016, Copenhagen, Denmark. 2016 Conference poster hal-02605559v1
	Inhibition de la digestion anaérobie par N-NH3 : étude de la dynamique microbienne et approche métabolomique Lénaïck Rouillac , O. Chapleur , Simon Poirier , Céline Madigou , Angéline Guenne 10èmes journées scientifiques du RFMF, May 2016, Montpellier, France. 2016 Conference poster hal-02605687v1
	Microbial community shifts within anaerobic digesters facing ammonia inhibition: Towards early warning bioindicators? Simon Poirier , Céline Madigou , O. Chapleur MEWE and Biofilms IWA Specialist Conference, Sep 2016, Copenhagen, Denmark. 2016 Conference poster hal-02605560v1

	Quelle énergie durable pour demain ? Nicole Sardat , Lynda Aissani , Christine Argillier , Romain Roy , Jacques Granier Irstea, pp.70, 2012 Books hal-02597378v1

	Apport des développements méthodologiques multi-omiques en méthanisation Jérôme Hamelin , Kim Milferstedt , Olivier Chapleur , Elie Desmond-Le Quéméner René Moletta; Romain Cresson. La méthanisation, TEC&DOC, 2024, 978-2-7430-2673-8 Book sections hal-04664478v1

	Maintien de la capacité d’infiltration des sols soumis aux eaux usées traitées : évaluation de l’intérêt de l’apport de matière carbonée (broyat de bois) Laura Delgado-Gonzalez , Chrystelle Bureau , Olivier Chapleur , Vivien Dubois , Aurélie Fildier Inrae - UR REVERSAAL. 2023 Reports hal-04307438v1

	Ingénierie écologique des communautés microbiennes de méthanisation des déchets ligno-cellulosiques Olivier Chapleur Sciences de l'environnement. AgroParisTech, 2012. Français. ⟨NNT : 2012AGPT0046⟩ Theses pastel-00945512v1
	Ingénierie écologique des communautés microbiennes de méthanisation des déchets ligno-cellulosiques O. Chapleur Sciences de l'environnement. Doctorat Sciences de l'Environnement, AgroParisTech, 2012. Français. ⟨NNT : ⟩ Theses tel-02605449v1

	From describing to managing environmental biotechnologies, through a combination of molecular ecology and biostatistics Olivier Chapleur Environmental Sciences. Université Paris Saclay, 2019 Habilitation à diriger des recherches tel-04459796v1

Olivier Chapleur

Publications

Generic role of zeolite in enhancing anaerobic digestion and mitigating diverse inhibitions: Insights from degradation performance and microbial characteristics

Easy16S: a user-friendly Shiny web-service for exploration and visualization of microbiome data.

A comprehensive dataset for assessing the impact of ammonium salts and zeolite on anaerobic digestion performance, microbial dynamics, and metabolomic profiles

Inhibition of anaerobic digestion by various ammonia sources resulted in subtle differences in metabolite dynamics

Monitoring of cellulose-rich biowaste co-digestion with 3D fluorescence spectroscopy and mass spectrometry-based metabolomics

The electrochemical microbial tree: A new concept for wastewater treatment

Diversity of novel archaeal viruses infecting methanogens discovered through coupling of stable isotope probing and metagenomics

Metataxonomics, metagenomics, metabolomics analysis of the influence of temperature modification in full-scale anaerobic digesters

Deterministic processes drive the microbial assembly during the recovery of an anaerobic digester after a severe ammonia shock

A longitudinal study of the effect of temperature modification in full-scale anaerobic digesters – dataset combining 16S rDNA gene sequencing, metagenomics, and metabolomics data

Rearrangement of incomplete multi-omics datasets combined with ComDim for evaluating replicate cross-platform variability and batch influence

Gradual development of ammonia-induced syntrophic acetate-oxidizing activities under mesophilic and thermophilic conditions quantitatively tracked using multiple isotopic approaches

Oxygen-reducing bidirectional microbial electrodes designed in real domestic wastewater

Zeolite favours propionate syntrophic degradation during anaerobic digestion of food waste under low ammonia stress

Time-course analysis of metabolomic and microbial responses in anaerobic digesters exposed to ammonia

Assessment of the microbial interplay during anaerobic co-digestion of wastewater sludge using common components analysis

Integrating independent microbial studies to build predictive models of anaerobic digestion inhibition by ammonia and phenol

Assessment of substrate biodegradability improvement in anaerobic Co-digestion using a chemometrics-based metabolomic approach

Effect of ammonia exposure and acclimation on the performance and the microbiome of anaerobic digestion

Integrative Analyses to Investigate the Link between Microbial Activity and Metabolite Degradation during Anaerobic Digestion

A Generic Multivariate Framework for the Integration of Microbiome Longitudinal Studies With Other Data Types

Co-digestion of wastewater sludge: choosing the optimal blend

Influence of support media supplementation to reduce the inhibition of anaerobic digestion by phenol and ammonia: Effect on degradation performances and microbial dynamics

Ecological consequences of abrupt temperature changes in anaerobic digesters

Support media can steer methanogenesis in the presence of phenol through biotic and abiotic effects

Inhibition of anaerobic digestion by phenol and ammonia: Effect on degradation performances and microbial dynamics

Characterization of a combined batch-continuous procedure for the culture of anammox biomass

Improving anaerobic digestion with support media: Mitigation of ammonia inhibition and effect on microbial communities

Anaerobic digestion of biowaste under extreme ammonia concentration: Identification of key microbial phylotypes

Community shifts within anaerobic digestion microbiota facing phenol inhibition: Towards early warning microbial indicators?

Acclimation strategy to increase phenol tolerance of an anaerobic microbiota

Increasing concentrations of phenol progressively affect anaerobic digestion of cellulose and associated microbial communities

New insights into the key microbial phylotypes of anaerobic sludge digesters under different operational conditions

Asymmetrical response of anaerobic digestion microbiota to temperature changes

Metaproteomics of cellulose methanisation under thermophilic conditions reveals a surprisingly high proteolytic activity

Co-inoculating ruminal content neither provides active hydrolytic microbes nor improves methanization of (13) C-cellulose in batch digesters

SIMSISH technique does not alter the apparent isotopic composition of bacterial cells

Analysis of incomplete multi-block datasets by ComDim

Characterization of virus-host dynamics in anaerobic digesters under abiotic stress

Diversity of novel viruses infecting methanogenic archaea, discovered through coupling of stable isotope probing and metagenomics

Implementation of a Nanopore metagenomic workflow for time-series of complex microbial communities: MAG catalog and functional annotation

Unraveling the microbial community interactions in anaerobic digesterswith common components analysis

Growing concentrations of phenol increasingly modify microbial communities' dynamics and performances' stability of anaerobic digesters

Inhibition of anaerobic digestion of urban sewage sludge by sodium propionate: biogas production and microbial community shift in continuous reactors

Deciphering the effect of propionic acid on anaerobic digestion of sludge: gas production and microbial community structure

Characterization of virus-host dynamics in anaerobic digesters under abiotic stress

Implementation of a Nanopore metagenomic workflow for time-series of complex microbial communities: MAG catalog and functional annotation.

Diversity of novel archaeal viruses infecting methanogens discovered through coupling of stable isotope probing and metagenomics

Assessment of the substrate biodegrability in anaerobic co-digestion using a metabolomic approach

Chemometric analysis of a metagenomic dataset to decipher the functional role of the micrpbiota from anaerobic digesters

A molecular ecology approach using Stable Isotope Probing and metagenomics to study viruses of methanogens' diversity Context

Easy16S : a user-friendly Shiny interface for analysis and visualization of metagenomic data

Acclimation of an anaerobic microbiota subjected to inhibitory phenol concentration

Enhancing anaerobic digestion of biowaste under extreme ammonia concentration with support media: identification of key microbial phylotypes

Characterization of the acclimatization of an anaerobic microbiota subjected to inhibitory phenol concentration

Inhibition de la digestion anaérobie par N-NH3 : étude de la dynamique microbienne et approche métabolomique

Microbial community shifts within anaerobic digesters facing ammonia inhibition: Towards early warning bioindicators?

Quelle énergie durable pour demain ?

Apport des développements méthodologiques multi-omiques en méthanisation

Maintien de la capacité d’infiltration des sols soumis aux eaux usées traitées : évaluation de l’intérêt de l’apport de matière carbonée (broyat de bois)

Ingénierie écologique des communautés microbiennes de méthanisation des déchets ligno-cellulosiques

Ingénierie écologique des communautés microbiennes de méthanisation des déchets ligno-cellulosiques

From describing to managing environmental biotechnologies, through a combination of molecular ecology and biostatistics