Olivier Filangi

Publications

Article dans une revue (17)

Validation of carbon isotopologue distribution measurements by GC-MS and application to 13 C-metabolic flux analysis of the tricarboxylic acid cycle in Brassica napus leaves Younès Dellero,Solenne Berardocco,Cécilia Bergès,Olivier Filangi,Alain Bouchereau Frontiers in Plant Science, 2023, 13, pp.885051. ⟨10.3389/fpls.2022.885051⟩ Article dans une revue hal-03932315v1
Suggesting disease associations for overlooked metabolites using literature from metabolic neighbors Maxime Delmas,Olivier Filangi,Christophe Duperier,Nils Paulhe,Florence Vinsonet al. GigaScience, 2023, 12, pp.giad065. ⟨10.1093/gigascience/giad065⟩ Article dans une revue hal-04223426v1
Evaluation of GC/MS-Based 13C-Positional Approaches for TMS Derivatives of Organic and Amino Acids and Application to Plant 13C-Labeled Experiments Younès Dellero,Olivier Filangi,Alain Bouchereau Metabolites, 2023, 13 (4), pp.466. ⟨10.3390/metabo13040466⟩ Article dans une revue hal-04045238v1
FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases Maxime Delmas,Olivier Filangi,Nils Paulhe,Florence Vinson,Christophe Duperieret al. Bioinformatics, 2021, 37 (21), pp.3896-3904. ⟨10.1093/bioinformatics/btab627⟩ Article dans une revue hal-03361495v2
Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica Julie Ferreira de Carvalho,Jérémy Lucas,Gwenaëlle Deniot,Cyril Falentin,Olivier Filangiet al. The Plant Journal, 2019, 98 (3), pp.434-447. ⟨10.1111/tpj.14228⟩ Article dans une revue hal-02019346v1
AgroDataRing: Une infrastructure partagée et mutualisée pour le stockage longue durée Pierre Adenot,Stéphane Bansard,David Benaben,Veronique Brunaud,Christophe Caronet al. Cahier des Techniques de l'INRA, 2018, N° Spécial: Données de la recherche, 7 p Article dans une revue hal-02097192v1
QTL detection for coccidiosis (Eimeria tenella) resistance in a Fayoumi × Leghorn F2 cross, using a medium-density SNP panel Nicola Bacciu,Bertrand Bed'Hom,Olivier Filangi,Hélène Romé,David Gourichonet al. Genetics Selection Evolution, 2014, 46 (1), pp.14. ⟨10.1186/1297-9686-46-14⟩ Article dans une revue hal-01189901v1
Detection of QTL controlling metabolism, meat quality, and liver quality traits of the overfed interspecific hybrid mule duck M. Kileh-Wais,J.M. Elsen,A. Vignal,K. Feves,F. Vignoleset al. Journal of Animal Science, 2013, 91 (2), pp.588-604. ⟨10.2527/jas.2012-5411⟩ Article dans une revue hal-01702555v1
Genome-wide interval mapping using SNPs identifies new QTL for growth, body composition and several physiological variables in an F-2 intercross between fat and lean chicken lines Olivier Demeure,Michel Jacques M.J. Duclos,Nicola Bacciu,Guillaume Le Mignon,Olivier Filangiet al. Genetics Selection Evolution, 2013, 45, online (september), Non paginé. ⟨10.1186/1297-9686-45-36⟩ Article dans une revue hal-01207752v1
Graphics Processing Unit-Accelerated Quantitative Trait Loci Detection Guillaume Chapuis,Olivier Filangi,Jean Michel J. M. Elsen,Dominique Lavenier,Pascale Le Roy Journal of Computational Biology, 2013, 20 (9), pp.672-686. ⟨10.1089/cmb.2012.0136⟩ Article dans une revue hal-00903794v1
Comparison of the analyses of the XVth QTLMAS common dataset II: QTL analysis Olivier Demeure,Olivier Filangi,Jean Michel Elsen,Pascale Le Roy BMC Proceedings, 2012, 6, online (Suppl. 2), Non paginé. ⟨10.1186/1753-6561-6-S2-S2⟩ Article dans une revue hal-01210358v1
Comparison of analyses of the XVth QTLMAS common dataset III: Genomic Estimations of Breeding Values Pascale Le Roy,Olivier Filangi,Olivier Demeure,Jean Michel Elsen BMC Proceedings, 2012, 6, online (Suppl. 2), Non paginé. ⟨10.1186/1753-6561-6-S2-S3⟩ Article dans une revue hal-01210357v1
Statistical properties of interval mapping methods on quantitative trait loci location: impact on QTL/eQTL analyses Xiaoqiang Wang,Hélène Gilbert,Carole Moreno-Romieux,Olivier Filangi,Jean Michel Elsenet al. BMC Genetics, 2012, 13 (online), Non paginé. ⟨10.1186/1471-2156-13-29⟩ Article dans une revue hal-01207748v1
Complex trait subtypes identification using transcriptome profiling reveals an interaction between two QTL affecting adiposity in chicken Yuna Blum,Guillaume Le Mignon,David Causeur,Olivier Filangi,Colette Désertet al. BMC Genomics, 2011, 12 (november), pp.8. ⟨10.1186/1471-2164-12-567⟩ Article dans une revue hal-00730144v1
QTL detection for a medium density SNP panel: comparison of different LD and LA methods Olivier O. Demeure,Nicola Bacciu,Olivier O. Filangi,Pascale P. Le Roy BMC Proceedings, 2010, 4 (Suppl 1), Non paginé. ⟨10.1186/1753-6561-4-S1-S10⟩ Article dans une revue hal-02655598v1
A fast algorithm for estimating transmission probabilities in QTL detection designs with dense maps Jean Michel Elsen,Olivier Filangi,Hélène Gilbert,Pascale Le Roy,Carole Moreno-Romieux Genetics Selection Evolution, 2009, 41, online (november), Non paginé. ⟨10.1186/1297-9686-41-50⟩ Article dans une revue hal-01193461v1
BioMAJ: a flexible framework for databanks synchronization and processing Olivier Filangi,Yoann Beausse,Anthony Assi,Ludovic Legrand,Jean-Marc Larréet al. Bioinformatics, 2008, 24 (16), pp.1823-1825. ⟨10.1093/bioinformatics/btn325⟩ Article dans une revue inria-00327502v1

Communication dans un congrès (21)

HOW DOES OXIDATION MODULATE POLYPHENOL ANTIOXIDANT PROPERTIES? INSIGHTS FROM APPLE BY-PRODUCTS FOR FOOD PRESERVATION. Coline Bourseau,Gildas Lebail,Agnes Gacel,Olivier Filangi,Kévin Billetet al. ICP2025 - XXXII International Conference on Polyphenols, University of Turku, Jul 2025, Turku (FI), Finland Communication dans un congrès hal-05515494v1
From waste to food preservation: exploring the antioxydant potential of oxidised apple pomace polyphenols Coline Bourseau,Gildas Lebail,Agnes Gacel,Olivier Filangi,Kévin Billetet al. 4th International Conference BACIF 2025 (Biologically Active Compounds in Food), Lodz University of Technology, Jun 2025, LODZ, Poland Communication dans un congrès hal-05515459v1
AdducTrackR, From Computational to Reactional: Initial Insights into Polyphenol-Protein Adducts in LC-HRMS Data Kévin Billet,Olivier Filangi,Sylvain Guyot XXXII èmes International Conference on Polyphenols, Groupe Polyphénols; Juah-Pekka Salminen, Turku University, Jul 2025, Turku (FI), Finland Communication dans un congrès hal-05200305v1
MetaSaurus : towards FAIR metabolomics analyses Olivier Filangi,Marie Lefebvre Séminaire semantic linked data, Oct 2023, Cap Agde, France Communication dans un congrès hal-04613582v1
Cytonuclear interactions remain stable during allopolyploid evolution despite repeated wholegenome duplications Julie Ferreira de Carvalho,Jérémy Lucas,Gwenaëlle Deniot,Cyril Falentin,Olivier Filangiet al. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2019, Saint Malo, France Communication dans un congrès hal-04665569v1
Structural and functional evolutionary dynamics of duplicated genes and genomes in nascent and natural B. napus Mathieu Rousseau-Gueutin,Jérémy Lucas,France Denoeud,Julie Ferreira de Carvalho,Zhesi Heet al. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2019, Saint-Malo, France Communication dans un congrès hal-03318226v1
How a polyploid becomes a new species: example from the Brassica model. Mathieu Rousseau-Gueutin,Julie Ferreira de Carvalho,J. Lucas,France Denoeud,Fabrice Legeaiet al. International Conference on Environmental and Agronomical Genomics, 2018, Paris, France Communication dans un congrès hal-03318223v1
From diploids to a huge diversity ready-to-use for oilseed rape breeding. Sophie Paillard,Maryse Lodé-Taburel,Gwenn Trotoux,Frederique Eber,Marie-Madeleine Giletet al. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France Communication dans un congrès hal-03318160v1
Cytonuclear interactions overcome inter-genomic conflict resulting from interspecific hybridization and genome doubling Julie Ferreira de Carvalho,Jérémy Lucas,Cyril Falentin,Gwenaëlle Deniot,Olivier Filangiet al. Second Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France Communication dans un congrès hal-03318235v1
Integration of Linked Data into Galaxy using Askomics Xavier Garnier,Olivier Dameron,Olivier Filangi,Fabrice Legeai,Anthony Bretaudeau Galaxy Community Conference, Jun 2017, Montpellier, France Communication dans un congrès hal-01576870v1
AskOmics, a web tool to integrate and query biological data using semantic web technologies Xavier Garnier,Anthony Bretaudeau,Olivier Filangi,Fabrice Legeai,Anne Siegelet al. JOBIM 2017 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2017, Lille, France. pp.1 Communication dans un congrès hal-01577425v1
Utilisation de SNP pour la cartographie de QTL de croissance, composition de la carcasse et qualité de la viande dans un croisement F2 de lignées de poulet grasse et maigre Olivier Demeure,Michel Jacques M.J. Duclos,Nicola Bacciu,Guillaume Le Mignon,Olivier Filangiet al. 10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2013, La Rochelle, France Communication dans un congrès hal-01210361v1
Genome-wide interval mapping using SNP identifies new QTL for growth, body composition, meat quality and several physiological parameters in an F2 intercross between Fat and Lean chicken lines Olivier Demeure,Michel Jacques M.J. Duclos,Nicola Bacciu,Guillaume Le Mignon,Olivier Filangiet al. XXI Plant & Animal Genome (PAG), Jan 2013, San Diego, United States Communication dans un congrès hal-01210360v1
Accelerating QTL mapping with graphics cards Guillaume Chapuis,Olivier Filangi,Jean Michel Elsen,Dominique Lavenier,Pascale Le Roy Journées Ouvertes en Biologie, Informatique et Mathématiques - JOBIM 2012, Jul 2012, Rennes, France. 516 p Communication dans un congrès hal-01363562v1
XVth QTLMAS: simulated dataset Jean Michel Elsen,Simon Tesseydre,Olivier Filangi,Pascale Le Roy,Olivier Demeure 15. European workshop on QTL mapping and marker assisted selection (QTLMAS), May 2011, Rennes, France. ⟨10.1186/1753-6561-6-S2-S1⟩ Communication dans un congrès hal-01210304v1
Linkage analysis of the XVIth QTLMAS simulated dataset using QTLMAP Olivier Demeure,Olivier Filangi,Hélène Gilbert,Carole Moreno-Romieux,Andres Legarraet al. 16th QTLMAP, AGRIS. Algero, ITA. Università degli Studi di Sassari (UniSS), ITA., May 2012, Alghero, Italy Communication dans un congrès hal-01210359v1
Integrating QTL controlling fatness, lipid metabolites and gene expressions to genetically dissect the adiposity complex trait in a meat chicken cross Yuna Blum,Olivier O. Demeure,Colette Désert,Hervé Guillou,J Bertrand-Michelet al. 62. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2011, Stavanger, Norway Communication dans un congrès hal-02748764v1
GPU Accelerted QTLMap Guillaume Chapuis,Olivier Filangi,Pascale Le Roy,Jean-Michel Elsen,Dominique Lavenier The 15th QTL-MAS workshop, May 2011, -, France Communication dans un congrès hal-00637840v1
QTLMap, a software for QTL detection in outbred populations Olivier Filangi,Carole Moreno-Romieux,Hélène Gilbert,Andres Legarra,Pascale Le Royet al. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany Communication dans un congrès hal-01193540v1
The repercussions of statistical properties of interval mapping methods on eQTL detection Xiaoqiang Wang,Jean Michel Elsen,Hélène Gilbert,Carole Moreno-Romieux,Olivier Filangiet al. 60. Annual Meeting of the European Association for Animal Production, Aug 2009, Barcelone, Spain Communication dans un congrès hal-01193475v1
QTLMAP, a software for the detection of QTL in full and half sib families Jean Michel J. M. Elsen,Olivier O. Filangi,Hélène Gilbert,Andres Legarra,Pascale P. Le Royet al. 60. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2009, Barcelone, Spain Communication dans un congrès hal-02755207v1

Poster de conférence (10)

FORVM Plants Guillaume Laisney,David Benaben,Thomas Bellembois,Kevin Billet,Alain Bouchereauet al. RFMF 2025 - 17èmes journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique, Jun 2025, Paris, France. pp.1-1, 2025 Poster de conférence hal-05121234v1
Metabolomic Semantic Datalake : A Scalable Approach to Managing Metabolomics Semantic Resources Guillaume Laisney,David Benaben,Christophe Duperier,Matéo Boudet,Franck Giacomoniet al. JOBIM 2024 - Journées Ouvertes en Biologie, Informatique, et Mathématiques, Jun 2024, Toulouse, France. pp.1-1, 2024 Poster de conférence hal-04655538v1
Oligopeptide-matching : a computational solution that match polyphenol-peptides adducts in HRMS-DATA Olivier Filangi,Kévin Billet,Sylvain Guyot 16èmes Journées Scientifiques RFMF, Jun 2024, Saint Malo (Palais du Grand Large), France. 2024 Poster de conférence hal-04922708v1
A project-scale map of metadata to improve future data management Mélanie Pétéra,Cecile Cabasson,Blandine Comte,Christophe Duperier,Olivier Filangiet al. Analytics 2022, Sep 2022, Nantes, France. Poster de conférence hal-03776494v1
Metabolite reporting in large-scale studies within different metabolomics communities: DO WE SPEAK THE SAME LANGUAGE? Ghina Hajjar,David Benaben,Nils Paulhe,Christophe Duperier,Olivier Filangiet al. Analytics 2022, Sep 2022, Nantes, France Poster de conférence hal-03775474v1
Comparative genomic analysis of Clubroot resistance in the Brassicaceae family Aurélie Evrard,Charles Bettembourg,Olivier Dameron,Olivier Filangi,Anthony Bretaudeauet al. Brassica2016, Oct 2016, Melbourne, Australia. Poster de conférence hal-01391707v1
Integration and query of biological datasets with Semantic Web technologies: AskOmics Aurélie Evrard,Charles Bettembourg,Mélanie Jubault,Olivier Dameron,Olivier Filangiet al. Journées Ouvertes Biologie, Informatique et Mathématiques (JOBIM 2016), Jun 2016, Lyon, France Poster de conférence hal-01391087v1
Finding gene to genome epistatic effects Olivier Filangi,Nicola Bacciu,Olivier Demeure,Andres Legarra,Jean Michel Elsenet al. 63. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2012, Bratislava, Slovakia. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 18, 2012, Annual Meeting of the European Association for Animal Production Poster de conférence hal-01210736v1
QGP: Quantitative Genetics Platform. A high performance computing solution for quantitative genetics software Misharl Monsoor,André Neau,Martin Souchal,Sylvie Nugier,François Laperruqueet al. Journées Ouvertes en Biologie, Informatique et Mathématiques - JOBIM 2012, Jul 2012, Rennes, France. LIRMM UMR CNRS/UM2 5506, 2012, Journées Ouvertes de Biologie, Informatique et Mathématiques Poster de conférence hal-02749290v1
Genome-Wide QTL detection for growth, body composition and quality related traits in chicken Olivier O. Demeure,Michel Jacques M.J. Duclos,Cécile Berri,Nicola Bacciu,Frederique Pitelet al. XXXII International Conference on Animal Genetics (ISAG), Jul 2010, Edinburgh, United Kingdom. 2010, Proceedings of the 32nd International Conference on Animal Genetics Poster de conférence hal-02751791v1

Autre publication scientifique (2)

Logo et site web de la plateforme MEANS Sylvaine Bitteur,Olivier Filangi 2013 Autre publication scientifique hal-02803910v1
BioMAJ : A workflow engine dedicated to biological bank management David Allouche,Anthony Assi,Yoann Beausse,Christophe Caron,Olivier Filangiet al. 2007 Autre publication scientifique inria-00176506v1

Pré-publication, Document de travail (1)

Suggesting disease associations for overlooked metabolites using literature from metabolic neighbours M. Delmas,O. Filangi,Christophe Duperier,N. Paulhe,F. Vinsonet al. 2023 Pré-publication, Document de travail hal-04188519v1

Rapport (1)

Data Management Plan for the Metabolic Profiling and Metabolomic Platform (P2M2) Olivier Filangi,Nathalie Lacrampe,Solenne Berardocco,Hélène Sotin,Nathalie Marnetet al. 2.2, Inrae; ifpc. 2025 Rapport (plan de gestion de données/data management plan) hal-05325416v1