Olivier Jaillon

Identifiants chercheurs

IdHAL :

olivier-jaillon

ORCID :

0000-0002-7237-9596

IdRef :

119733374

VIAF :

214325464

ISNI :

0000000359160466

Publications

Article dans une revue (76)

The southern gap in ocean microbiome science Hugo Sarmento,Paula Huber,Célio Dias Santos-Júnior,André Abreu,Thulani Makhalanyaneet al. Ocean Microbiology, 2025, 1 (1), pp.6. ⟨10.1186/s44375-025-00006-w⟩ Article dans une revue hal-05334436v1
Latitudinal diversity in circadian and light-sensing genes in an ecologically vital group of marine picoeukaryote algae Janaina Rigonato,Jean-Claude Lozano,Valérie Vergé,Olivier Jaillon,Francois-Yves Bouget The International Society of Microbiologial Ecology Journal, 2025, 19 (1), pp.wraf263. ⟨10.1093/ismejo/wraf263⟩ Article dans une revue hal-05545855v1
Patterns and drivers of diatom diversity and abundance in the global ocean Juan Pierella Karlusich,Karen Cosnier,Lucie Zinger,Nicolas Henry,Charlotte Nefet al. Nature Communications, 2025, 16 (1), pp.3452. ⟨10.1038/s41467-025-58027-7⟩ Article dans une revue hal-05138560v1
Mirusviruses link herpesviruses to giant viruses Morgan Gaïa,Lingjie Meng,Eric Pelletier,Patrick Forterre,Chiara Vanniet al. Nature, 2023, 616 (7958), pp.783-789. ⟨10.1038/s41586-023-05962-4⟩ Article dans une revue pasteur-04085734v1
Climate genomics—Geoscientists, ecologists, and geneticists must reinforce their collaborations to confront climate change Jilda Alicia Caccavo,Paul Frémont,Olivier Jaillon,Marion Gehlen Global Change Biology, 2023, 29 (21), pp.5999-6001. ⟨10.1111/gcb.16924⟩ Article dans une revue hal-04196622v1
Plankton biogeography in the 21st century and impacts of climate change: advances through genomics Paul Frémont,Marion Gehlen,Olivier Jaillon Comptes Rendus. Biologies, 2023, 346 (1), pp.13-24. ⟨10.5802/crbiol.107⟩ Article dans une revue hal-04026636v1
Pan-Arctic plankton community structure and its global connectivity Federico M Ibarbalz,Nicolas Henry,Frédéric Mahé,Mathieu Ardyna,Adriana Zingoneet al. Elementa: Science of the Anthropocene, 2023, 11 (1), pp.00060. ⟨10.1525/elementa.2022.00060⟩ Article dans une revue hal-04267640v1
Computing marine plankton connectivity under thermal constraints Darshika Manral,Doroteaciro Iovino,Olivier Jaillon,Simona Masina,Hugo Sarmentoet al. Frontiers in Marine Science, 2023, 10, pp.1-13. ⟨10.3389/fmars.2023.1066050⟩ Article dans une revue cea-04286502v1
Predicting global distributions of eukaryotic plankton communities from satellite data Hiroto Kaneko,Hisashi Endo,Nicolas Henry,Cédric Berney,Frédéric Mahéet al. ISME Communications, 2023, 3 (1), pp.101. ⟨10.1038/s43705-023-00308-7⟩ Article dans une revue hal-04394784v1
Ocean-wide comparisons of mesopelagic planktonic community structures Janaina Rigonato,Marko Budinich,Alejandro Murillo,Manoela Brandão,Juan Pierella Karlusichet al. ISME Communications, 2023, 3 (1), pp.83. ⟨10.1038/s43705-023-00279-9⟩ Article dans une revue hal-04184772v1
Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean Tom Delmont,Morgan Gaia,Damien Hinsinger,Paul Frémont,Chiara Vanniet al. Cell Genomics, 2022, 2 (5), pp.100123. ⟨10.1016/j.xgen.2022.100123⟩ Article dans une revue hal-03872935v2
Restructuring of plankton genomic biogeography in the surface ocean under climate change Paul Frémont,Marion Gehlen,Mathieu Vrac,Jade Leconte,Tom O. Delmontet al. Nature Climate Change, 2022, 12 (4), pp.393-401. ⟨10.1038/s41558-022-01314-8⟩ Article dans une revue insu-03659872v1
Giant viruses encode actin-related proteins Violette da Cunha,Morgan Gaia,Hiroyuki Ogata,Olivier Jaillon,Tom O Delmontet al. Molecular Biology and Evolution, 2022, 39 (2), pp.msac022. ⟨10.1093/molbev/msac022⟩ Article dans une revue cea-04281384v1
Genomic adaptation of the picoeukaryote $Pelagomonas\ calceolata$ to iron-poor oceans revealed by a chromosome-scale genome sequence Nina Guérin,Marta Ciccarella,Elisa Flamant,Paul Frémont,Sophie Mangenotet al. Communications Biology, 2022, 5 (1), pp.983. ⟨10.1038/s42003-022-03939-z⟩ Article dans une revue cea-03791710v1
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems Daniel Richter,Romain Watteaux,Thomas Vannier,Jade Leconte,Paul Frémontet al. eLife, 2022, 11, pp.e78129. ⟨10.7554/eLife.78129⟩ Article dans une revue hal-02399723v2
Comparative genomics reveals new functional insights in uncultured MAST species Aurelie Labarre,David López-Escardó,Francisco Latorre,Guy Leonard,François Bucchiniet al. The International Society of Microbiologial Ecology Journal, 2021, 15 (6), pp.1767-1781. ⟨10.1038/s41396-020-00885-8⟩ Article dans une revue hal-04288985v1
Environmental vulnerability of the global ocean epipelagic plankton community interactome Samuel Chaffron,Erwan Delage,Marko Budinich,Damien Vintache,Nicolas Henryet al. Science Advances , 2021, 7 (35), pp.eabg1921. ⟨10.1126/sciadv.abg1921⟩ Article dans une revue hal-03443359v2
Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean Hiroto Kaneko,Romain Blanc-Mathieu,Hisashi Endo,Samuel Chaffron,Tom Delmontet al. iScience, 2021, 24 (1), pp.102002. ⟨10.1016/j.isci.2020.102002⟩ Article dans une revue hal-03097258v3
Niche adaptation promoted the evolutionary diversification of tiny ocean predators Francisco Latorre,Ina M. Deutschmann,Aurélie Labarre,Aleix Obiol,Anders K. Krabberodet al. Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (25), pp.e2020955118. ⟨10.1073/pnas.2020955118⟩ Article dans une revue hal-04288986v1
Genome Resolved Biogeography of Mamiellales Jade Leconte,L. Felipe Felipe Benites,Thomas Vannier,Patrick Wincker,Gwenael Piganeauet al. Genes, 2020, 11 (1), pp.66. ⟨10.3390/genes11010066⟩ Article dans une revue hal-02505108v1
Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal Shinya Sato,Deepak Nanjappa,Richard G Dorrell,Fabio Rocha Jimenez Vieira,Elena Kazamiaet al. Scientific Reports, 2020, 10 (1), pp.9449. ⟨10.1038/s41598-020-65941-x⟩ Article dans une revue inserm-02886223v1
Tara Oceans: towards global ocean ecosystems biology Shinichi Sunagawa,Silvia Acinas,Peer Bork,Chris Bowler,Silvia Acinaset al. Nature Reviews Microbiology, 2020, 18 (8), pp.428-445. ⟨10.1038/s41579-020-0364-5⟩ Article dans une revue hal-04394809v1
Marine DNA viral macro- and microdiversity from Pole to Pole Ann Gregory,Ahmed Zayed,Nádia Conceição-Neto,Ben Temperton,Ben Bolducet al. Cell, 2019, 177 (5), pp.1109-1123.e14. ⟨10.1016/j.cell.2019.03.040⟩ Article dans une revue hal-02387010v1
Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics Yaiza M. Castillo,Jean-François Mangot,Luiz Felipe Benites,Ramiro Logares,Megumi Kuronishiet al. Molecular Ecology, 2019, 28 (18), pp.4272-4289. ⟨10.1111/mec.15210⟩ Article dans une revue cea-04307624v1
Global Trends in Marine Plankton Diversity across Kingdoms of Life Federico Ibarbalz,Nicolas Henry,Manoela Brandão,Severine Martini,Greta Busseniet al. Cell, 2019, 179 (5), pp.1084-1097.e21. ⟨10.1016/j.cell.2019.10.008⟩ Article dans une revue hal-03094778v1
Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems Luigi Caputi,Quentin Carradec,Damien Eveillard,Amos Kirilovsky,Éric Pelletieret al. Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩ Article dans une revue hal-02999805v1
Single cell genomics yields a wide diversity of small planktonic protists across major ocean ecosystems M. E Sieracki,N. J Poulton,O. Jaillon,P. Wincker,Colomban de Vargaset al. Scientific Reports, 2019, 9, pp.6025. ⟨10.1038/s41598-019-42487-1⟩ Article dans une revue hal-02113815v1
Elucidation of codon usage signatures across the domains of life Eva Maria Novoa,Irwin Jungreis,Olivier Jaillon,Manolis Kellis Molecular Biology and Evolution, 2019, 36 (10), pp.2328-2339. ⟨10.1093/molbev/msz124⟩ Article dans une revue cea-04309465v1
A global ocean atlas of eukaryotic genes Quentin Carradec,Eric Pelletier,Corinne da Silva,Adriana A. Alberti,Yoann Seeleuthneret al. Nature Communications, 2018, 9 (1), pp.373. ⟨10.1038/s41467-017-02342-1⟩ Article dans une revue cea-01874711v1
Discovering Millions of Plankton Genomic Markers from the Atlantic Ocean and the Mediterranean Sea Majda Arif,Jérémy Gauthier,Kevin Sugier,Daniele Iudicone,Olivier Jaillonet al. Molecular Ecology Resources, 2018, pp.1-24. ⟨10.1111/1755-0998.12985⟩ Article dans une revue hal-01987200v1
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans Yoann Seeleuthner,Samuel Mondy,Vincent Lombard,Quentin Carradec,Eric Pelletieret al. Nature Communications, 2018, 9, pp.310. ⟨10.1038/s41467-017-02235-3⟩ Article dans une revue hal-01771839v1
A new sequence data set of SSU rRNA gene for Scleractinia and its phylogenetic and ecological applications Roberto Arrigoni,Benoît Vacherie,Francesca Benzoni,Fabrizio Stefani,Eric Karsentiet al. Molecular Ecology Resources, 2017, 17 (5), pp.1054-1071. ⟨10.1111/1755-0998.12640⟩ Article dans une revue hal-03971503v1
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition Adriana A. Alberti,Julie Poulain,Stefan Engelen,Karine Labadie,Sarah Romacet al. Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩ Article dans une revue hal-01771844v1
Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells Jean-François Mangot,Ramiro Logares,Pablo Sánchez,Fran Latorre,Yoann 6 Seeleuthneret al. Scientific Reports, 2017, 7, pp.41498. ⟨10.1038/srep41498⟩ Article dans une revue hal-01466618v1
Survey of the green picoalga Bathycoccus genomes in the global ocean Thomas Vannier,Jade Leconte,Yoann Seeleuthner,Samuel Mondy,Eric Pelletieret al. Scientific Reports, 2016, 6, pp.37900. ⟨10.1038/srep37900⟩ Article dans une revue hal-01410203v1
Structure and function of the global ocean microbiome Shinichi Sunagawa,Luis Pedro Coelho,Samuel Chaffron,Jens Roat Kultima,Karine Labadieet al. Science, 2015, 348 (6237), pp.1261359. ⟨10.1126/science.1261359⟩ Article dans une revue hal-01233742v1
Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages Magali Lescot,Pascal Hingamp,Kenji K Kojima,Emilie Villar,Sarah Romacet al. The International Society of Microbiologial Ecology Journal, 2015, 10 (5), pp.1134-1146. ⟨10.1038/ismej.2015.192⟩ Article dans une revue hal-01258212v1
Open science resources for the discovery and analysis of Tara Oceans data Stéphane Pesant,Fabrice Not,Marc Picheral,Stefanie Kandels-Lewis,Noan Le Bescotet al. Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩ Article dans une revue hal-01253984v1
Eukaryotic plankton diversity in the sunlit ocean Noan Le Bescot,Ian Probert,Margaux Carmichael,Julie Poulain,Sarah Romacet al. Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩ Article dans une revue hal-01253979v1
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing Ramon Massana,Angélique Gobet,Stéphane Audic,David Bass,Lucie Bittneret al. Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩ Article dans une revue hal-01191731v1
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication G Albert Wu,Simon Prochnik,Jerry Jenkins,Jérôme Salse,Uffe Hellstenet al. Nature Biotechnology, 2014, 32 (7), pp.656-662. ⟨10.1038/nbt.2906⟩ Article dans une revue hal-02285484v1
Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities Ramiro Logares,Shinichi Sunagawa,Guillem Salazar,Francisco M. Cornejo-Castillo,Isabel Ferreraet al. Environmental Microbiology, 2014, 16 (9, SI), pp.2659-2671. ⟨10.1111/1462-2920.12250⟩ Article dans une revue istex hal-01258219v1
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates. Camille Berthelot,Frédéric Brunet,Domitille Chalopin,Amélie Juanchich,Maria Bernardet al. Nature Communications, 2014, 5, pp.1-10. ⟨10.1038/ncomms4657⟩ Article dans une revue hal-01193812v1
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes Pascal Hingamp,Nigel Grimsley,Silvia G Acinas,Camille Clerissi,Lucie Subiranaet al. The International Society of Microbiologial Ecology Journal, 2013, 7 (9), pp.1678-1695. ⟨10.1038/ismej.2013.59⟩ Article dans une revue hal-01258223v1
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Angélique d'Hont,France Denoeud,Jean-Marc Aury,Franc-Christophe Baurens,Françoise Carreelet al. Nature, 2012, 488 (7410), pp.213-7. ⟨10.1038/nature11241⟩ Article dans une revue hal-00855582v1
Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite. France Denoeud,Michaël Roussel,Benjamin Noel,Ivan Wawrzyniak,Corinne da Silvaet al. Genome Biology, 2011, 12 (3), pp.R29. ⟨10.1186/gb-2011-12-3-r29⟩ Article dans une revue inserm-00617212v1
A Holistic Approach to Marine Eco-Systems Biology Eric Karsenti,Silvia G. Acinas,Peer Bork,Chris Bowler,Colomban de Vargaset al. PLoS Biology, 2011, 9 (10), pp.e1001177. ⟨10.1371/journal.pbio.1001177⟩ Article dans une revue hal-01893669v1
Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate France Denoeud,Simon Henriet,Sutada Mungpakdee,Jean-Marc Aury,Corinne da Silvaet al. Science, 2010, 330 (6009), pp.1381-1385. ⟨10.1126/science.1194167⟩ Article dans une revue halsde-00544648v1
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis Francis Martin,Annegret Kohler,Claude Murat,Raffaella Balestrini,Pedro M Coutinhoet al. Nature, 2010, 464 (7291), pp.1033-1038. ⟨10.1038/nature08867⟩ Article dans une revue cea-00907731v1
Annotating genomes with massive-scale RNA sequencing France Denoeud,Jean-Marc Aury,Corinne da Silva,Benjamin Noel,Odile Rogieret al. Genome Biology, 2008, 9 (12), ⟨10.1186/gb-2008-9-12-r175⟩ Article dans une revue hal-02664963v1
Analysis of sequence variability in the macronuclear DNA of Paramecium tetraurelia: a somatic view of the germline. L. Duret,Jean Cohen,Claire Jubin,Philippe Dessen,Jean-François Goûtet al. Genome Research, 2008, 18 (4), pp.585-96. ⟨10.1101/gr.074534.107⟩ Article dans une revue hal-00282468v1
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita Pierre Abad,Jerome Gouzy,Jean-Marc Aury,Philippe Castagnone-Sereno,Etienne Danchinet al. Nature Biotechnology, 2008, 26 (8), pp.909-915. ⟨10.1038/nbt.1482⟩ Article dans une revue hal-01189285v1
Translational control of intron splicing in eukaryotes Olivier Jaillon,Khaled Bouhouche,Jean-François Gout,Jean-Marc Aury,Benjamin Noelet al. Nature, 2008, 451 (7176), pp.359-362. ⟨10.1038/nature06495⟩ Article dans une revue cea-00945555v1
The genome sequence of the model ascomycete fungus Podospora anserina Eric Espagne,Olivier Lespinet,Fabienne Malagnac,Corinne da Silva,Olivier Jaillonet al. Genome Biology, 2008, 9 (5), pp.R77. ⟨10.1186/gb-2008-9-5-r77⟩ Article dans une revue hal-04011226v1
The genome sequence of the model ascomycete fungus Podospora anserina. Eric Espagne,Olivier Lespinet,Fabienne Malagnac,Corinne da Silva,Olivier Jaillonet al. Genome Biology, 2008, 9 (5), pp.R77. ⟨10.1186/gb-2008-9-5-r77⟩ Article dans une revue hal-00286300v1
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Olivier Jaillon,Jean-Marc Aury,Benjamin Noel,Alberto Policriti,Christian Clepetet al. Nature, 2007, 449 (7161), pp.463-7. ⟨10.1038/nature06148⟩ Article dans une revue inria-00180136v1
Gene loss and evolutionary rates following whole genome duplication in Teleost fishes F. Brunet,Roest Crollius H.,M. Paris,Aury Jm.,Patricia Gibertet al. Molecular Biology and Evolution, 2006, 23, pp.1808-1816 Article dans une revue hal-00093159v1
Gene loss and evolutionary rates following whole-genome duplication in teleost fishes Frédéric Brunet,Hugues Roest Crollius,Mathilde Paris,Jean-Marc Aury,Patricia Gibertet al. Molecular Biology and Evolution, 2006, 23 (9), pp.1808-1816. ⟨10.1093/molbev/msl049⟩ Article dans une revue hal-02660787v1
Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Jean-Marc Aury,Olivier Jaillon,L. Duret,Benjamin Noel,Claire Jubinet al. Nature, 2006, 444 (7116), pp.171-8. ⟨10.1038/nature05230⟩ Article dans une revue hal-00132091v1
Comparative analysis of BAC and whole genome shotgun sequences from an Anopheles gambiae region related to Plasmodium encapsulation Karin Eiglmeier,Patrick Wincker,Laurence Cattolico,Véronique Anthouard,Inge Holmet al. Insect Biochemistry and Molecular Biology, 2005, 35 (8), pp.799-814. ⟨10.1016/j.ibmb.2005.02.020⟩ Article dans une revue istex hal-02683098v1
Whole Genome Sequence Comparisons and “Full-Length” cDNA Sequences: A Combined Approach to Evaluate and Improve Arabidopsis Genome Annotation Vanina Castelli,Jean-Marc Aury,Olivier Jaillon,Patrick Wincker,Christian Clepetet al. Genome Research, 2004, 14 (3), pp.406-413. ⟨10.1101/gr.1515604⟩ Article dans une revue hal-04789187v1
Genome duplication in the teleost fish Tretraodon nigroviridis reveals the early vertebrate proto-karyotype Olivier Jaillon,Jean-Marc Aury,Frédéric Brunet,Jean-Louis Petit,Nicole Stange-Thomannet al. Nature, 2004, 431 (7011), pp.946-957. ⟨10.1038/nature03025⟩ Article dans une revue hal-02681415v1
Whole genome sequence comparisons and &quot;full-lenght&quot; cDNA sequences: a combined approach to evaluate and improve Arabidopdid genome annotation V. Castelli,J.M. Aury,Olivier Jaillon,Patrick Wincker,Christian Clepetet al. Genome Research, 2004, 14 (3), pp.406-413 Article dans une revue hal-02672600v1
The DNA sequence and analysis of human chromosome 14 Roland Heilig,Ralph Eckenberg,Jean-Louis Petit,Núria Fonknechten,Corinne da Silvaet al. Nature, 2003, 421 (6923), pp.601-607. ⟨10.1038/nature01348⟩ Article dans une revue hal-04312826v1
Exploring root symbiotic programs in the model legume Medicago truncatula using EST analysis E.P. Journet,D. van Tuinen,J. Gouzy,H. Crespeau,V. Carreauet al. Nucleic Acids Research, 2002, 30, pp.5579-5592 Article dans une revue hal-00427223v1
Variability of the nonstructural 5A protein of hepatitis C virus type 3a isolates and relation to interferon sensitivity. Sandrine Castelain,Hafida Khorsi-Cauet,J. Roussel,Catherine François,O. Jaillonet al. Journal of Infectious Diseases, 2002, 185, pp.573-583 Article dans une revue hal-00313004v1
Exploring root symbiotic programs in the model legume Medicago truncatula using EST analysis Etienne-Pascal Journet,Diederik van Tuinen,Jerome Gouzy,Hervé Crespeau,V. Carreauet al. Nucleic Acids Research, 2002, 30 (24), pp.5579-5592. ⟨10.1093/nar/gkf685⟩ Article dans une revue hal-02678310v1
The Complete Genome Sequence of the Lactic Acid Bacterium Lactococcus lactis ssp. lactis IL1403 Alexander Bolotin,Patrick Wincker,Stéphane Mauger,Olivier Jaillon,Karine Malarmeet al. Genome Research, 2001, 11 (5), pp.731-753. ⟨10.1101/gr.gr-1697r⟩ Article dans une revue hal-04297851v1
The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403 A. Bolotin,Patrick Wincker,S. Mauger,Olivier Jaillon,Karine Malarmeet al. Genome Research, 2001, 11, pp.731-753 Article dans une revue hal-02681585v1
Karyotype and chromosome location of characteristic tandem repeats in the pufferfish &lt;i&gt;Tetraodon nigroviridis&lt;/i&gt; C. Fischer,C. Ozouf-Costaz,H. Roest Crollius,C. Dasilva,O. Jaillonet al. Cytogenetic and Genome Research, 2000, 88 (1-2), pp.50-55. ⟨10.1159/000015484⟩ Article dans une revue hal-04398482v1
Characterization and Repeat Analysis of the Compact Genome of the Freshwater Pufferfish Tetraodon nigroviridis H. Roest Crollius,O. Jaillon,C. Dasilva,C. Ozouf-Costaz,C. Fizameset al. Genome Research, 2000, 10 (7), pp.939-949. ⟨10.1101/gr.10.7.939⟩ Article dans une revue hal-03772367v1
The Gene Encoding the Mouse Homologue of the Human Osteoclast-Specific 116-kDa V-ATPase Subunit Bears a Deletion in Osteosclerotic (oc/oc) Mutants J.-C Scimeca,A. Franchi,C. Trojani,Hugues Parrinello,J Grosgeorgeet al. BONE, 2000, ⟨10.1016/S8756-3282(99)00278-1⟩ Article dans une revue hal-02117516v1
Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence Hugues Roest Crollius,Olivier Jaillon,Alain Bernot,Corinne Dasilva,Laurence Bouneauet al. Nature Genetics, 2000, 25 (2), pp.235-238. ⟨10.1038/76118⟩ Article dans une revue hal-03772374v1
Amplification and detection of the terminal 3' non-coding region of hepatitis C virus isolates H. Khorsi,T. Salabi,Sandrine Castelain,O. Jaillon,P. Zawadzkiet al. Research in virology, 1998, 149 (2), pp.115-121. ⟨10.1016/s0923-2516(98)80087-3⟩ Article dans une revue istex hal-03613712v1
Sequence analysis of the NS5A protein of European hepatitis C virus 1b isolates and relation to interferon sensitivity. G. Duverlie,Hafida Khorsi-Cauet,Sandrine Castelain,O. Jaillon,Jacques Izopetet al. J Gen Virol, 1998, 79 ( Pt 6), pp.1373-1381 Article dans une revue hal-00313715v1
Sequence analysis of the NS5A protein of European hepatitis C virus 1b isolates and relation to interferon sensitivity. F Lunel,G Duverlie,F Eb,O Jaillon,J Izopetet al. Journal of General Virology, 1998, 79 (6), pp.1373-1381. ⟨10.1099/0022-1317-79-6-1373⟩ Article dans une revue hal-03613713v1

Pré-publication, Document de travail (10)

Deviation from Power-Law Distribution when Scaling the Distribution of Marine Plankton Folds from Genomes to Communities Lucas Pavlovic,Caroline Vernette,Emanuele Pigani,Louis Joigneaux,Alexandre Labesseet al. 2025 Pré-publication, Document de travail hal-05038679v1
Genomics-based quantitative biogeography of marine plankton Margaux Crédeville,Roy El Hourany,Swan Sow,Julie Poulain,Manon Depatyet al. 2025 Pré-publication, Document de travail hal-05363600v1
Biological and genomic resources for the cosmopolitan phytoplankton&lt;i&gt;Bathycoccus&lt;/i&gt;: Insights into genetic diversity and major structural variations Louis Dennu,Martine Devic,Janaina Rigonato,Angela Falciatore,Jean-Claude Lozanoet al. 2023 Pré-publication, Document de travail (preprint/prepublication) hal-04286701v1
Unveiling hidden eukaryotes: diversity of Endomyxa (Rhizaria) in coastal marine habitats Cédric Berney,Stefan Ciaghi,Sarah Romac,Frédéric Mahé,Colomban de Vargaset al. 2023 Pré-publication, Document de travail hal-03972005v1
Mirusviruses provide a missing link in the evolution of giant viruses Plankton-infecting relatives of herpesviruses clarify the evolutionary trajectory of giant viruses Morgan Gaïa,Lingjie Meng,Eric Pelletier,Patrick Forterre,Chiara Vanniet al. 2022 Pré-publication, Document de travail (preprint/prepublication) hal-03876463v1
Changes in functional composition and gene expression in eukaryotic plankton at the Atlantic-Arctic Polar front Paul Frémont,Corinne da Silva,Lucia Campese,Émilie Villar,Achal Rastogiet al. 2023 Pré-publication, Document de travail (preprint/prepublication) hal-04328288v1
Insights into biotic and abiotic modulation of ocean mesopelagic communities Janaina Rigonato,Marko Budinich,Alejandro Murillo,Manoela Brandão,Juan Karlusichet al. 2022 Pré-publication, Document de travail hal-03166899v1
Equatorial to Polar genomic variability of the microalgae &lt;i&gt;Bathycoccus prasinos&lt;/i&gt; Jade Leconte,Youri Timsit,Tom O Delmont,Magali Lescot,Gwenael Piganeauet al. 2023 Pré-publication, Document de travail (preprint/prepublication) hal-04308022v1
Restructuring of genomic provinces of surface ocean plankton under climate change Paul Frémont,Marion Gehlen,Mathieu Vrac,Jade Leconte,Tom O. Delmontet al. 2021 Pré-publication, Document de travail cea-03166589v2
Environmental vulnerability of the global ocean plankton community interactome S. Chaffron,E. Delage,M. Budinich,D. Vintache,N. Henryet al. 2020 Pré-publication, Document de travail hal-03971893v1

Autre publication scientifique (1)

AtlantECO Deliverable 2.1: AtlantECO-BASE1 Olivier Jaillon 2023, ⟨10.5281/zenodo.7944432⟩ Autre publication scientifique hal-04391099v1

Communication dans un congrès (8)

Global-Scale Climate Genomics Describes Modulations in Plankton Composition and Gene Expression that Structure the Sunlit Ocean Paul Frémont,Marion Gehlen,Olivier Jaillon Gordon Research Conference. Ecological and Evolutionary Genomics. Dynamics of Ecological and Evolutionary Change, Jul 2023, Smithfield, United States Communication dans un congrès hal-04392413v1
Restructuring of genomic provinces of surface ocean plankton under climate change Paul Frémont,Olivier Jaillon Environmental and Agronomical Genomics Symposium, Oct 2021, Tours, France Communication dans un congrès hal-04421472v1
Equatorial to Polar genomic description of the cosmopolitan Bathycoccus populations Jade Leconte,Olivier Jaillon 5e Colloque de Génomique Environnementale, Oct 2019, La Rochelle, France Communication dans un congrès hal-04391685v1
Genomic investigation of climate change induced reorganization of global plankton biogeography Paul Frémont,Marion Gehlen,Daniele Iudicone,Olivier Jaillon IMBER Future Oceans2, Jun 2019, Brest, France Communication dans un congrès hal-04391718v1
Populations structure of the microalgae Bathycoccus prasinos in the open ocean Jade Leconte,Olivier Jaillon Marine Microbial Strategies for Survival in a Changing Environment, Jun 2018, Lucca, Italy Communication dans un congrès hal-04391671v1
Is environmental Genomics genomics ? Olivier Jaillon RECOMB 2018, Apr 2018, Paris, France Communication dans un congrès hal-04392421v1
GENOTROUT - Apport des nouvelles technologies de séquençage (NGS) à l'analyse du génome de la truite arc-en-ciel (2010-2013) Yann Guiguen,Carine Genet,Edwige Quillet,Mekki Boussaha,Jean-Nicolas Volffet al. 9. Colloque Agenae/ANR, Mar 2012, La Rochelle, France. pp.18 Communication dans un congrès hal-01019800v1
GENOTROUT - Apport des nouvelles technologies de séquençage (NGS) à l'analyse du génome pseudotétraploide de la truite arc-en-ciel (2010-2012) Yann Guiguen,Carine Genet,Edwige Quillet,Jean-Nicolas Volff,Domitille Chalopinet al. 8. Journées AGENAE, Nov 2010, Bordeaux, France Communication dans un congrès hal-01193660v1

Poster de conférence (6)

Ocean-wide comparisons of plankton composition clarify differences in the structure and regulation of mesopelagic communities Janaina Rigonato,Patrick Wincker,Olivier Jaillon 18th International Symposium on Microbial Ecology, Oct 2022, Lausanne ( CH), Switzerland. Poster de conférence hal-04391705v1
Contemporary and end of century plankton biogeography at genomic scale: bridging ecology and biogeochemistry Paul Frémont,Olivier Jaillon Climate Science for Ecological Forecasting Symposium, May 2022, Londres (Grande Bretagne), United Kingdom Poster de conférence hal-04421468v1
Populations structure of the microalgae Bathycoccus prasinos in the open ocean Jade Leconte,Olivier Jaillon Elucidating Microbial Processes Across Spatial and Temporal Scales, Jul 2018, Lucca, Italy. Poster de conférence hal-04391673v1
Populations structure of the microalgae Bathycoccus prasinos in the open ocean Jade Leconte,Olivier Jaillon Marine Microbial Strategies for Survival in a Changing Environment, Jun 2018, Lucca, Italy. Poster de conférence hal-04391665v1
Comparative approaches for metagenomic biogeography and population structures of eukaryotes Thomas Vannier,Jade Leconte,Patrick Wincker,Olivier Jaillon 4th Environmental Genomics symposium, Sep 2017, Marseille, France Poster de conférence hal-04391650v1
Insights into vertebrate whole-genome duplications from the rainbow trout genome Camille Berthelot,Frédéric Brunet,Domitille Chalopin,Amélie Juanchich,Maria Bernardet al. 22. Annual Meeting of the Society for Molecular Biology and Evolution (SMBE), Jun 2014, Puerto Rico, Puerto Rico. 2014, Smbe 2014. Molecular Evolution: From Genome Technology to the History of Life Poster de conférence hal-01194063v1

HDR (1)

Du Tetraodon aux océans, temps et espace de génomes eucaryotes Olivier Jaillon Sciences du Vivant [q-bio]. Université d'Evry Val d'Essonne, 2016 HDR tel-04392438v1

Chapitre d'ouvrage (2)

The rainbow trout genome, an important landmark for aquaculture and genome evolution Julien Bobe,Lucie Marandel,Stéphane Panserat,Pierre Boudinot,Camille Berthelotet al. Genomics in Aquaculture, Academic Press, 2016, 978-0-12-801418-9. ⟨10.1016/B978-0-12-801418-9.00002-0⟩ Chapitre d'ouvrage hal-01595642v1
Genome sequence initiatives Anne-Francoise A.-F. Adam-Blondon,Olivier Jaillon,Silvia Vezzulli,Andrey Zharkikh,Michela Troggioet al. Genetics, Genomics and Breeding of Crop Plants, Sciences Publishers, 390 p., 2011, 978-1-57808-717-4 Chapitre d'ouvrage hal-02808727v1