|
Natural variation in response to combined water and nitrogen deficiencies in Arabidopsis
Zeyun Xue
,
Marina Ferrand
,
Elodie Gilbault
,
Olivier Zurfluh
,
Gilles Clément
Journal articles
hal-04632972v1
|
|
Resource allocation modeling for autonomous prediction of plant cell phenotypes
Anne Goelzer
,
Loïc Rajjou
,
Fabien Chardon
,
Olivier Loudet
,
Vincent Fromion
Journal articles
hal-04529640v2
|
|
Genomic Basis of Adaptation to a Novel Precipitation Regime
Ahmed Elfarargi
,
Elodie Gilbault
,
Nina Döring
,
Célia Neto
,
Andrea Fulgione
Journal articles
hal-04301973v1
|
|
DiffSegR: an RNA-seq data driven method for differential expression analysis using changepoint detection
Arnaud Liehrmann
,
Etienne Delannoy
,
Alexandra Launay-Avon
,
Elodie Gilbault
,
Olivier Loudet
Journal articles
hal-04282211v2
|
|
Protein kinase SnRK2 . 4 is a key regulator of aquaporins and root hydraulics in Arabidopsis
Zaigham Shahzad
,
Colette Tournaire-Roux
,
Matthieu Canut
,
Mattia Adamo
,
Jan Roeder
Journal articles
hal-04248273v2
|
|
Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana
Pierre Baduel
,
Basile Leduque
,
Amandine Ignace
,
Isabelle Gy
,
José Gil
Journal articles
hal-03099067v3
|
|
The Evolutionary Dynamics of Genetic Incompatibilities Introduced by Duplicated Genes in Arabidopsis thaliana
Wen-Biao Jiao
,
Vipul Patel
,
Jonas Klasen
,
Fang Liu
,
Petra Pecinkova
Journal articles
hal-03330176v1
|
|
Mild drought in the vegetative stage induces phenotypic, gene expression and DNA methylation plasticity in Arabidopsis but no transgenerational effects
Tom Van J M Dooren
,
Amanda Bortolini Silveira
,
Elodie E. Gilbault
,
José Jimenez-Gomez
,
Antoine Martin
Journal articles
hal-02535255v1
|
|
Natural variation at FLM splicing has pleiotropic effects modulating ecological strategies in Arabidopsis thaliana
Mathieu Hanemian
,
François Vasseur
,
Elodie E. Marchadier
,
Elodie E. Gilbault
,
Justine Bresson
Journal articles
hal-02945319v1
|
|
The complex genetic architecture of shoot growth natural variation in Arabidopsis thaliana
Elodie Marchadier
,
Mathieu Hanemian
,
Sebastien S. Tisne
,
Lien Bach
,
Christos Bazakos
Journal articles
hal-02629200v1
|
|
Natural variation at XND1 impacts root hydraulics and trade-off for stress responses in Arabidopsis
Ning Tang
,
Zaigham Shahzad
,
Fabien Lonjon
,
Olivier Loudet
,
Fabienne Vailleau
Journal articles
hal-01918090v1
|
|
High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell
Todd P. Michael
,
Florian Jupe
,
Felix Bemm
,
S. Timothy Motley
,
Justin P. Sandoval
Journal articles
hal-02626875v1
|
|
Leaf segmentation and tracking in arabidopsis thaliana combined to an organ-scale plant model for genotypic differentiation
Gautier Viaud
,
Olivier Loudet
,
Paul-Henry Cournede
Journal articles
hal-01602596v1
|
|
AraQTL - workbench and archive for systems genetics in Arabidopsis thaliana
Harm Nijveen
,
Wilco Ligterink
,
Joost Keurentjes
,
Olivier Loudet
,
Jiao Long
Journal articles
hal-01532690v1
|
|
An Arabidopsis natural epiallele maintained by a feed-forward silencing loop between histone and DNA
Astrid Agorio
,
Stéphanie Durand
,
Elisa Fiume
,
Cécile Brousse
,
Isabelle Gy
Journal articles
hal-01602603v1
|
|
New strategies and tools in quantitative genetics: how to go from the phenotype to the genotype
Christos Bazakos
,
Mathieu Hanemian
,
Charlotte Trontin
,
José M. Jimenez-Gomez
,
Olivier Loudet
Journal articles
hal-01607849v1
|
|
A potassium-dependent oxygen sensing pathway regulates plant root hydraulics
Zaigham Shahzad
,
Matthieu Canut
,
Colette Tournaire-Roux
,
Alexandre Martiniere
,
Yann Boursiac
Journal articles
hal-01417732v1
|
|
A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana
Charlotte Trontin
,
Seifollah Poormohammad Kiani
,
Jason A. Corwin
,
Kian Hematy
,
Jennifer Yansouni
Journal articles
hal-01204062v1
|
|
Extensive [i]cis[/i]-regulatory variation robust to environmental perturbation in [i]Arabidopsis[/i]
Francisco A. Cubillos
,
Oliver Stegle
,
Cécile Grondin
,
Matthieu Canut
,
Sebastien Tisne
Journal articles
hal-01204141v1
|
|
SHOOT GROWTH1 Maintains Arabidopsis Epigenomes by Regulating IBM1
Vincent Coustham
,
Daniela Loredan Vlad
,
Aurélie Deremetz
,
Isabelle Gy
,
Francisco Cubillos
Journal articles
hal-01019546v1
|
|
Local Evolution of Seed Flotation in Arabidopsis
S. Saez Aguayo
,
Corinne C. Rondeau-Mouro
,
A. Macquet
,
I. Kronholm
,
M.C. Ralet
Journal articles
hal-00991499v1
|
|
Editorial Overview: Genome studies and molecular genetics: Genomic approaches to understanding evolution, development and the plant phenome
Kirsten Bomblies
,
Olivier Loudet
Journal articles
hal-01204051v1
|
|
Phenoscope: an automated large-scale phenotyping platform offering high spatial homogeneity
Sebastien S. Tisne
,
Yann Y. Serrand
,
Lien L. Bach
,
Elodie E. Gilbault
,
Rachid R. Ben Ameur
Journal articles
hal-01004455v1
|
|
Leaf fructose content is controlled by the vacuolar transporter SWEET17 in Arabidopsis.
Fabien Chardon
,
Magali Bedu
,
Fanny Calenge
,
Patrick a W Klemens
,
Lara Spinner
Journal articles
hal-00860481v1
|
|
Natural Variation in the ATPS1 Isoform of ATP Sulfurylase Contributes to the Control of Sulfate Levels in Arabidopsis
Anna Koprivova
,
Marco Giovannetti
,
Patrycja Baraniecka
,
Bok-Rye Lee
,
Cécile Grondin
Journal articles
hal-01203997v1
|
|
Extensive natural epigenetic variation at a [i]De Novo[/i] originated gene
Amanda Bortolini Silveira
,
Charlotte Trontin
,
Sandra Cortijo
,
Joan Barau
,
Luiz Eduardo Vieira del Bem
Journal articles
hal-01190576v1
|
|
Natural Variation at the FRD3 MATE Transporter Locus Reveals Cross-Talk between Fe Homeostasis and Zn Tolerance in Arabidopsis thaliana
Christophe Pineau
,
Stéphanie Loubet
,
Cécile Lefoulon
,
Claude Chalies
,
Cécile Fizames
Journal articles
hal-02024149v1
|
|
Rapid establishment of genetic incompatibility through natural epigenetic variation
Stéphanie S. Durand
,
Nicolas N. Bouche
,
Elsa E. Perez Strand
,
Olivier O. Loudet
,
Christine C. Camilleri
Journal articles
hal-00999980v1
|
|
Allelic heterogeneity and trade-off shape natural variation for response to soil micronutrient
Seifollah Poormohammad Kiani
,
Charlotte Trontin
,
Matthew Andreatta
,
Matthieu Simon
,
Thierry Robert
Journal articles
hal-01190766v1
|
|
Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis
Jean-Marc J.-M. Routaboul
,
Christian C. Dubos
,
Gilles G. Beck
,
Catherine C. Marques
,
Przemyslaw P. Bidzinski
Journal articles
hal-01000367v1
|
|
Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux bayésiens
Jimmy Vandel
,
Brigitte Mangin
,
Matthieu Vignes
,
Damien Leroux
,
Olivier Loudet
Revue des Sciences et Technologies de l'Information - Série RIA : Revue d'Intelligence Artificielle, 2012, 26 (6), pp.679-708. ⟨10.3166/ria.26.679-708⟩
Journal articles
hal-01197611v1
|
|
Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in [i]Arabidopsis thaliana[/i]
Sophie Jasinski
,
Alain Lecureuil
,
Martine Miquel
,
Olivier Loudet
,
Sylvain Raffaele
Journal articles
hal-01190708v1
|
|
Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures
Francisco Cubillos
,
Jennifer Yansouni
,
Ahmid Khalili
,
Sandrine Balzergue
,
Samira Elftieh
Journal articles
hal-01189696v1
|
|
Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants
Francisco F. Cubillos
,
Vincent Coustham
,
Olivier O. Loudet
Journal articles
hal-01004213v1
|
|
DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions
Matthieu Simon
,
Adeline Simon
,
Frédéric Martins
,
Lucy Botran
,
Sébastien Tisné
Journal articles
hal-04453792v1
|
|
DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions
Matthieu M. Simon
,
Adeline A. Simon
,
Frédéric Martins Martins
,
Lucy Botran
,
Sebastien S. Tisne
Journal articles
hal-01000411v1
|
|
Disentangling the Intertwined Genetic Bases of Root and Shoot Growth in Arabidopsis
Marie Bouteillé
,
Gaelle Rolland
,
Crispulo Balsera
,
Olivier Loudet
,
Bertrand Muller
Journal articles
hal-01190638v1
|
|
What does Arabidopsis natural variation teach us (and does not teach us) about adaptation in plants?
Charlotte Trontin Trontin
,
Sebastien S. Tisne
,
Lien L. Bach
,
Olivier O. Loudet
Journal articles
hal-01000536v1
|
|
Influence of mutation rate on estimators of genetic differentiation-lessons from Arabidopsis thaliana
Ilkka Kronholm
,
Olivier Loudet
,
Juliette de Meaux
Journal articles
hal-01203876v1
|
|
The scale of population structure in Arabidopsis thaliana
A. Platt
,
M. Horton
,
Huang Y.S.
,
Li Y.
,
Anastasio A.E.
Journal articles
hal-00457092v1
|
|
Gene transposition causing natural variation for growth in [i]Arabidopsis thaliana[/i]
Daniela Loredan Vlad
,
Fabrice Rappaport
,
Matthieu Simon
,
Olivier Loudet
Journal articles
hal-01203934v1
|
|
Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana
David Bikard
,
Dhaval Patel
,
Claire Le Mette
,
Veronica Giorgi
,
Christine Camilleri
Journal articles
hal-01203956v1
|
|
La spéciation, un processus toujours en cours
Carole Kerdelhue
,
Christian Burban
,
Jean-Christophe Simon
,
Flavie Vanlerberghe-Masutti
,
Olivier Loudet
INRA Magazine, 2009, 11, pp.X-XII
Journal articles
hal-01203975v1
|
|
Analysis of Natural Allelic Variation Controlling Arabidopsis thaliana Seed Germinability in Response to Cold and Dark: Identification of Three Major Quantitative Trait Loci
Ping-Hong Meng
,
Audrey Macquet
,
Olivier Loudet
,
Annie Marion-Poll
,
Helen North
Journal articles
hal-04176796v1
|
|
Identification of quantitative trait loci controlling symptom development during viral infection in Arabidopsis thaliana
Ophélie Sicard
,
Olivier O. Loudet
,
Joost J. B. Keurentjes
,
Thierry T. Candresse
,
Olivier O. Le Gall
Journal articles
hal-02656693v1
|
|
Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2
Olivier O. Loudet
,
Véra Saliba-Colombani
,
Christine C. Camilleri
,
Fanny Calenge
,
Virginie Gaudon
Journal articles
hal-02663317v1
|
|
A naturally occurring mutation in an Arabidopsis accession affects a beta-D-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage
Audrey Macquet
,
Marie-Christine Ralet
,
Olivier O. Loudet
,
Jocelyne Kronenberger
,
Gregory G. Mouille
Journal articles
hal-02660522v1
|
|
Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics
Fanny Calenge
,
Véra Saliba-Colombani
,
Stéphanie Mahieu
,
Olivier O. Loudet
,
Francoise Vedele Daniel-Vedele
Journal articles
hal-02655658v1
|
|
Identification of QTL controlling root growth response to phosphate starvation in Arabidopsis thaliana
Matthieu Reymond
,
Sergio Svistoonoff
,
Olivier O. Loudet
,
Laurent Nussaume
,
Thierry Desnos
Journal articles
hal-02659203v1
|
|
Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana
Celine Diaz
,
Véra Saliba-Colombani
,
Olivier O. Loudet
,
Pierre Belluomo
,
Laurence Moreau
Journal articles
hal-02661380v1
|
|
Quantitative trait loci analysis of primary cell wall composition in arabidopsis
Gregory G. Mouille
,
Hanna Witucka-Wall
,
Marie-Pierre Bruyant
,
Olivier O. Loudet
,
Sandra S. Pelletier
Journal articles
hal-02659437v1
|
|
Quantitative Trait Loci Analysis of Primary Cell Wall Composition in Arabidopsis
Grégory Mouille
,
Hanna Witucka-Wall
,
Marie-Pierre Bruyant
,
Olivier Loudet
,
Sandra Pelletier
Journal articles
hal-04373071v1
|
|
Identification of QTLs controlling gene expression networks defined a priori
Daniel J. Kliebenstein
,
Marilyn Al West
,
Hans van Leeuwen
,
Olivier O. Loudet
,
R.W. Doerge
Journal articles
hal-02661319v1
|
|
Quantitative trait loci controlling root growth and architecture in Arabidopsis thaliana confirmed by heterogeneous inbred family
Olivier O. Loudet
,
Virginie Gaudon
,
Alain Trubuil
,
Francoise Vedele Daniel-Vedele
Journal articles
hal-02678339v1
|
|
Light-response quantitative trait loci identified with composite interval and extreme array mapping in Arabidopsis thaliana
D.J. Wolyn
,
J.O. Borevitz
,
Olivier O. Loudet
,
C. Schwartz
,
J. Maloof
Genetics, 2004, 167, pp.907-917
Journal articles
hal-02678846v1
|
|
Quantitative trait loci analysis of water and anion contents in interaction with nitrogen availability in Arabidopsis thaliana
Olivier O. Loudet
,
Sylvain S. Chaillou
,
Annemarie Krapp
,
Francoise Daniel Vedele
Genetics, 2003, 163, pp.711-722
Journal articles
hal-02676580v1
|
|
Quantitative trait loci analysis of nitrogen use efficiency in Arabidopsis
Olivier O. Loudet
,
Sylvain S. Chaillou
,
Patricia Mérigout
,
Joel Talbotec
,
Francoise Daniel Vedele
Journal articles
hal-02682611v1
|
|
Bay-O X Shahdara recombinant inbred line population : a powerful tool for the genetic dissection of complex traits in Arabidopsis
Olivier O. Loudet
,
Sylvain S. Chaillou
,
Christine C. Camilleri
,
David D. Bouchez
,
Francoise Daniel Vedele
TAG Theoretical and Applied Genetics, 2002, 104 (6-7), pp.1173-1184
Journal articles
hal-02678717v1
|
|
The response of root/shoot partitioning and root morphology to light reduction in maize genotypes
E. Guingo
,
Olivier O. Loudet
Crop Science, 2001, 41 (2), pp.363-371
Journal articles
hal-02672556v1
|