Olivier Panaud

Publications

Article dans une revue (67)

Oryza genome evolution through a tetraploid lens Alice Fornasiero,Tao Feng,Noor Al-Bader,Aseel Alsantely,Saule Mussurovaet al. Nature Genetics, 2025, ⟨10.1038/s41588-025-02183-5⟩ Article dans une revue hal-05063705v1
Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation Alessia Russo,Mattia Alessandrini,Moaine El Baidouri,Daniel Frei,Teresa Rosa Galiseet al. Nature Communications, 2024, 15 (1), pp.6308. ⟨10.1038/s41467-024-50622-4⟩ Article dans une revue hal-04664022v1
Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants Emilie Aubin,Christel Llauro,Joseph Garrigue,Marie Mirouze,Olivier Panaudet al. PLoS Genetics, 2023, 19 (10), pp.e1010964. ⟨10.1371/journal.pgen.1010964⟩ Article dans une revue hal-04274792v1
Horizontal Gene Transfers in Plants Emilie Aubin,Moaine El Baidouri,Olivier Panaud Life, 2021, 11 (8), pp.857. ⟨10.3390/life11080857⟩ Article dans une revue hal-03443232v1
The Ecology of the Genome and the Dynamics of the Biological Dark Matter Alheli Flores-Ferrer,Anne Nguyen,Sylvain Glémin,Jean-Marc Deragon,Olivier Panaudet al. Journal of Theoretical Biology, 2021, 518, pp.110641. ⟨10.1016/j.jtbi.2021.110641⟩ Article dans une revue hal-03157289v1
Whole plastid genome-based phylogenomics supports an inner placement of the O. insectifera group rather than a basal position in the rapidly diversifying Ophrys genus (Orchidaceae) Joris Bertrand,Anaïs Gibert,Christel Llauro,Olivier Panaud Botany Letters, 2021, 168 (3), pp.452-457. ⟨10.1080/23818107.2021.1893216⟩ Article dans une revue hal-03375011v1
Construction and characterisation of a knock-down RNA interference line of OsNRPD1 in rice (Oryza sativa ssp japonica cv Nipponbare) Emilie Debladis,Tzuu-Fen Lee,Yan-Jiun Huang,Jui-Hsien Lu,Sandra M. Mathioniet al. Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1795), pp.20190338. ⟨10.1098/rstb.2019.0338⟩ Article dans une revue hal-04274817v1
The impact of transposable elements on the structure, evolution and function of the rice genome Roland Akakpo,Marie-Christine Carpentier,Yue Ie Hsing,Olivier Panaud New Phytologist, 2020, ⟨10.1111/nph.16356⟩ Article dans une revue hal-02434127v1
Retrotranspositional landscape of Asian rice revealed by 3000 genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-018-07974-5⟩ Article dans une revue hal-02098307v1
Characterization of the complete plastome of Ophrys aveyronensis , a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution Joris Bertrand,Anaïs Gibert,Christel Llauro,Olivier Panaud Mitochondrial DNA Part B Resources, 2019, 4 (2), pp.3256-3257. ⟨10.1080/23802359.2019.1670748⟩ Article dans une revue hal-02297851v1
QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica Sandra Odonkor,Soyeon Choi,Debkanta Chakraborty,Liliam Martinez-Bello,Xuewen Wanget al. Frontiers in Plant Science, 2018, 9, ⟨10.3389/fpls.2018.00918⟩ Article dans une revue hal-04296727v1
QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica Sandra Odonkor,Soyeon Choi,Debkanta Chakraborty,Liliam Martinez-Bello,Xuewen Wanget al. Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.00918⟩ Article dans une revue hal-02098582v1
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza Joshua Stein,Yeisoo Yu,Dario Copetti,Derrick Zwickl,Li Zhanget al. Nature Genetics, 2018, 50 (2), pp.285-296. ⟨10.1038/s41588-018-0040-0⟩ Article dans une revue hal-02098593v1
Oak genome reveals facets of long lifespan Christophe Plomion,Jean-Marc Aury,Joelle Amselem,Thibault Leroy,Florent Muratet al. Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩ Article dans une revue hal-01820559v1
Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology Emilie Debladis,Christel Llauro,Marie-Christine Carpentier,Marie Mirouze,Olivier Panaud BMC Genomics, 2017, 18, art. 537 [8 p.]. ⟨10.1186/s12864-017-3753-zg⟩ Article dans une revue ird-01626046v1
Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants Sophie Lanciano,Marie-Christine Carpentier,Christel Llauro,Edouard Jobet,Dagmara Robakowska-Hyzoreket al. PLoS Genetics, 2017, 13 (2), pp.e1006630. ⟨10.1371/journal.pgen.1006630⟩ Article dans une revue hal-02098598v1
Horizontal transfers of transposable elements in eukaryotes: The flying genes Olivier Panaud Comptes Rendus. Biologies, 2016, 339 (7-8), pp.296-299. ⟨10.1016/j.crvi.2016.04.013⟩ Article dans une revue hal-02099878v1
DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses Thomas Wicker,Yeisoo Yu,Georg Haberer,Klaus Mayer,Pradeep Reddy Marriet al. Nature Communications, 2016, 7 (1), pp.12790 (2016). ⟨10.1038/ncomms12790⟩ Article dans une revue hal-02099869v1
Evolution of Plant Phenotypes, from Genomes to Traits Josep Casacuberta,Scott Jackson,Olivier Panaud,Michael Purugganan,Jonathan F. Wendel G3, 2016, 6 (4), pp.775-778. ⟨10.1534/g3.115.025502⟩ Article dans une revue hal-02099871v1
A new approach for annotation of transposable elements using small RNA mapping. Moaine El Baidouri,Kyung Do Kim,Brian Abernathy,Siwaret Arikit,Florian Maumuset al. Nucleic Acids Research, 2015, 43 (13), pp.e84. ⟨10.1093/nar/gkv257⟩ Article dans une revue hal-01215276v1
Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice Taciane Finatto,Antonio Costa de Oliveira,Cristian Chaparro,L.C. da Maia,D.R. Fariaset al. Rice, 2015, 8, pp.13. ⟨10.1186/s12284-015-0045-6⟩ Article dans une revue hal-01162622v1
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology Dario Copetti,Jianwei Zhang,Moaine El Baidouri,Dongying Gao,Jun Wanget al. BMC Genomics, 2015, 16 (1), pp.538. ⟨10.1186/s12864-015-1762-3⟩ Article dans une revue hal-02099881v1
Drivers and dynamics of diversity in plant genomes. Olivier Panaud,Scott A Jackson,Jonathan F Wendel New Phytologist, 2014, 202 (1), pp.15-8 Article dans une revue hal-01218167v1
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication Muhua Wang,Yeisoo Yu,Georg Haberer,Pradeep Reddy Marri,Chuanzhu Fanet al. Nature Genetics, 2014, 46 (9), pp.982-988. ⟨10.1038/ng.3044⟩ Article dans une revue hal-02099904v1
Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation Benoît Drogue,Hervé Sanguin,Amel Chamam,Michael Mozar,Christel Llauroet al. Frontiers in Plant Science, 2014, 5, pp.1-14. ⟨10.3389/fpls.2014.00607⟩ Article dans une revue hal-02099891v1
Widespread and frequent horizontal transfers of transposable elements in plants. Moaine El Baidouri,Marie-Christine Carpentier,Richard Cooke,Dongying Gao,Eric Lasserreet al. Genome Research, 2014, 24 (5), pp.831-8. ⟨10.1101/gr.164400.113⟩ Article dans une revue hal-01218140v1
Use of Next Generation Sequencing (NGS) Technologies for the Genome-Wide Detection of Transposition Moaine Elbaidouri,Cristian Chaparro,Olivier Panaud Methods in Molecular Biology, 2013, pp.265-274. ⟨10.1007/978-1-62703-568-2_19⟩ Article dans une revue hal-02102445v1
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Jonas Collén,Betina Porcel,Wilfrid Carré,Steven G Ball,Cristian Chaparroet al. Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩ Article dans une revue hal-01073830v1
Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution Moaine El Baidouri,Olivier Panaud Genome Biology and Evolution, 2013, 5 (5), pp.954-965. ⟨10.1093/gbe/evt025⟩ Article dans une revue hal-02102447v1
Reference genome sequence of the model plant Setaria Jeffrey Bennetzen,Jeremy J. Schmutz,Hao Wang,Ryan Percifield,Jennifer Hawkinset al. Nature Biotechnology, 2012, 30 (6), pp.555-561. ⟨10.1038/nbt.2196⟩ Article dans une revue hal-02114330v1
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Angélique d'Hont,France Denoeud,Jean-Marc Aury,Franc-Christophe Baurens,Françoise Carreelet al. Nature, 2012, 488 (7410), pp.213-7. ⟨10.1038/nature11241⟩ Article dans une revue hal-00855582v1
Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution. Moaine El Baidouri,Olivier Panaud Genome Biology and Evolution, 2012, 5 (5), pp.954-65 Article dans une revue hal-01218174v1
Isolation and characterisation of a bacterial strain degrading the herbicide sulcotrione from an agricultural soil Christophe Calvayrac,Fabrice Martin-Laurent,Alexia Faveaux,Nathalie Picault,Olivier Panaudet al. Pest Management Science, 2012, 68 (3), pp.340-347. ⟨10.1002/ps.2263⟩ Article dans une revue hal-01137037v1
International Congress on Transposable Elements (ICTE) 2012 in Saint Malo and the sea of TE stories. Abdelkader Aïnouche,Mireille Bétermier,Mick Chandler,Richard Cordaux,Gaël Cristofariet al. Mobile DNA, 2012, 3 (1), pp.17. ⟨10.1186/1759-8753-3-17⟩ Article dans une revue inserm-00764323v1
Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data Francois Sabot,Nathalie Picault,Moaine El-Baidouri,Christel Llauro,Cristian Chaparroet al. The Plant Journal, 2011, 66 (2), pp.241-246. ⟨10.1111/j.1365-313X.2011.04492.x⟩ Article dans une revue hal-02114338v1
The genome of Theobroma cacao. Xavier Argout,Jerome Salse,Jean-Marc Aury,Mark J Guiltinan,Gaetan Drocet al. Nature Genetics, 2011, 43 (2), pp.101-8. ⟨10.1038/ng.736⟩ Article dans une revue hal-00855922v1
RDA derived Oryza minuta-specific clones to probe genomic conservation across Oryza and introgression into rice (O. sativa L.) Junghyun Shim,Olivier Panaud,Clémentine Vitte,Merlyn S. Mendioro,Darshan S. Brar Euphytica, 2010, 176 (2), pp.269 - 279. ⟨10.1007/s10681-010-0245-5⟩ Article dans une revue istex hal-02664386v1
Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices. Anne Roulin,Cristian Chaparro,Benoit Piegu,Scott Jackson,Olivier Panaud Genome Biology and Evolution, 2010, 2, pp.132-9. ⟨10.1093/gbe/evq005⟩ Article dans une revue hal-00787403v1
A genetic model for the female sterility barrier between Asian and African cultivated rice species. Andrea Garavito,Romain Guyot,Jaime Lozano,Frédérick F. Gavory,Sylvie Samainet al. Genetics, 2010, 185 (4), pp.1425-40. ⟨10.1534/genetics.110.116772⟩ Article dans une revue hal-00787398v1
Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae. Anne Roulin,Benoit Piegu,Philippe M Fortune,François Sabot,Angélique d'Hontet al. BMC Evolutionary Biology, 2009, 9 (58), pp.58. ⟨10.1186/1471-2148-9-58⟩ Article dans une revue hal-00693471v1
Reply: A unified classification system for eukaryotic transposable elements should reflect their phylogeny Thomas Wicker,Francois Sabot,Aurélie Hua-Van,Jeffrey L. Bennetzen,Pierre Capyet al. Nature Reviews Genetics, 2009, 10 (4), pp.276-276. ⟨10.1038/nrg2165-c4⟩ Article dans une revue hal-01189545v1
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Alexandra Z Worden,Jae-Hyeok Lee,Thomas Mock,Pierre Rouzé,Melinda P Simmonset al. Science, 2009, 324 (5924), pp.268-72. ⟨10.1126/science.1167222⟩ Article dans une revue hal-00693449v1
Identification of an active LTR retrotransposon in rice. Nathalie Picault,Cristian Chaparro,Cristel Llauro,Benoit Piegu,Willfried Stengeret al. The Plant Journal, 2009, 58 (5), pp.754-65. ⟨10.1111/j.1365-313X.2009.03813.x⟩ Article dans une revue hal-00685656v1
A unified classification system for eukaryotic transposable elements should reflect their phylogeny Reply. T. Wicker,F. Sabot,A. Hua Van,J. L. Bennetzen,P. Capyet al. Nature Reviews Genetics, 2009, 10, pp.00-00 Article dans une revue hal-00462118v1
Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus. Julie Petit,Emmanuelle Bourgeois,Wilfried Stenger,Martine Bès,Gaétan Drocet al. Molecular Genetics and Genomics, 2009, 282 (6), pp.633-52. ⟨10.1007/s00438-009-0493-z⟩ Article dans une revue istex hal-00693499v1
The molecular bases of cereal domestication and the history of rice. Olivier Panaud Comptes Rendus. Biologies, 2009, 332 (2-3), pp.267-72. ⟨10.1016/j.crvi.2008.09.003⟩ Article dans une revue istex hal-00693484v1
Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice. Séverine Lacombe,Hiroshi Nagasaki,Carole Santi,David Duval,Benoit Pieguet al. BMC Plant Biology, 2008, 8, pp.123. ⟨10.1186/1471-2229-8-123⟩ Article dans une revue hal-00366386v1
The Rice Annotation Project Database (RAP-DB): 2008 update. Tsuyoshi Tanaka,Baltazar A Antonio,Shoshi Kikuchi,Takashi Matsumoto,Yoshiaki Nagamuraet al. Nucleic Acids Research, 2008, 36 (Database issue), pp.D1028-33. ⟨10.1093/nar/gkm978⟩ Article dans une revue hal-00300215v1
Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza Anne Roulin,Benoit Piegu,Rod Wing,Olivier Panaud The Plant Journal, 2008, 53 (6), pp.950-959. ⟨10.1111/j.1365-313X.2007.03388.x⟩ Article dans une revue hal-02114361v1
A universal classification of eukaryotic transposable elements implemented in Repbase Thomas Wicker,Francois Sabot,Aurélie Hua-Van,Jeffrey L. Bennetzen,Pierre Capyet al. Nature Reviews Genetics, 2008, 9 (5), pp.414. ⟨10.1038/nrg2165-c2⟩ Article dans une revue hal-01189557v1
Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza Jetty Ammiraju,Andrea Zuccolo,Yeisoo Yu,Xiang Song,Benoit Pieguet al. The Plant Journal, 2007, 52 (2), pp.342-351. ⟨10.1111/j.1365-313X.2007.03242.x⟩ Article dans une revue hal-02114387v1
A unified classification system for eukaryotic transposable elements. T. Wicker,F. Sabot,A. Hua Van,J. L. Bennetzen,P. Capyet al. Nature Reviews Genetics, 2007, 8, pp.973-982 Article dans une revue hal-00169819v1
Spip and Squiq, two novel rice non-autonomous LTR retro-element families related to RIRE3 and RIRE8 Clémentine Vitte,Cristian Chaparro,Hadi H. Quesneville,Olivier Panaud Plant Science, 2007, 172 (1), pp.8-19. ⟨10.1016/j.plantsci.2006.07.008⟩ Article dans une revue istex hal-02114377v1
RetrOryza: a database of the rice LTR-retrotransposons. Cristian Chaparro,Romain Guyot,Andrea Zuccolo,Benoit Piegu,Olivier Panaud Nucleic Acids Research, 2007, 35 (Database issue), pp.D66-70. ⟨10.1093/nar/gkl780⟩ Article dans une revue hal-00164403v1
A unified classification system for eukaryotic transposable elements should reflect their phylogeny Thomas Wicker,Francois Sabot,Aurélie Hua-Van,Jeffrey L. Bennetzen,Pierre Capyet al. Nature Reviews Genetics, 2007, 8 (12), pp.973-982. ⟨10.1038/nrg2165⟩ Article dans une revue hal-01189458v1
LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss Clémentine Vitte,Olivier Panaud,Hadi H. Quesneville BMC Genomics, 2007, 8 (1), pp.218. ⟨10.1186/1471-2164-8-218⟩ Article dans une revue hal-02114382v1
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Evelyne Derelle,Conchita Ferraz,Stephane Rombauts,Pierre Rouzé,Alexandra Z Wordenet al. Proceedings of the National Academy of Sciences of the United States of America, 2006, 103 (31), pp.11647-52. ⟨10.1073/pnas.0604795103⟩ Article dans une revue hal-00164247v1
Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice. Benoit Piegu,Romain Guyot,Nathalie Picault,Anne Roulin,Abhijit Saniyalet al. Genome Research, 2006, 16 (10), pp.1262-9. ⟨10.1101/gr.5290206⟩ Article dans une revue hal-00164404v1
LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model. C. Vitte,O. Panaud Cytogenetic and Genome Research, 2005, 110 (1-4), pp.91-107. ⟨10.1159/000084941⟩ Article dans une revue hal-00168793v1
LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model C. Vitte,O. Panaud Cytogenetic and Genome Research, 2005, 110 (1-4), pp.91-107. ⟨10.1159/000084941⟩ Article dans une revue hal-04305951v1
Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.) C. Vitte,T. Ishii,F. Lamy,D. Brar,O. Panaud Molecular Genetics and Genomics, 2004, 272 (5), pp.504-511. ⟨10.1007/s00438-004-1069-6⟩ Article dans une revue istex hal-04305849v1
Formation of Solo-LTRs Through Unequal Homologous Recombination Counterbalances Amplifications of LTR Retrotransposons in Rice Oryza sativa L. C. Vitte,Olivier Panaud Molecular Biology and Evolution, 2003, 20 (4), pp.528-540. ⟨10.1093/molbev/msg055⟩ Article dans une revue hal-04305865v1
Characterization of transposable elements in the genome of rice (Oryza sativa L.) using Representational Difference Analysis (RDA) O. Panaud,C. Vitte,J. Hivert,S. Muzlak,J. Talaget al. Molecular Genetics and Genomics, 2002, 268 (1), pp.113-121. ⟨10.1007/s00438-002-0734-x⟩ Article dans une revue istex hal-04305880v1
Unmanaged sexual reproduction and the dynamics of genetic diversity of a vegetatively propagated crop plant, cassava ( Manihot esculenta Crantz), in a traditional farming system M. Elias,L. Penet,P. Vindry,D. Mckey,O. Panaudet al. Molecular Ecology, 2001, 10 (8), pp.1895-1907. ⟨10.1046/j.0962-1083.2001.01331.x⟩ Article dans une revue istex hal-04154369v1
Assessment of genetic relationships between Setaria italica and its wild relative S. viridis using AFLP markers Maud Le Thierry D’ennequin,Olivier Panaud,Bruno Toupance,Aboubakry Sarr TAG Theoretical and Applied Genetics, 2000, 100, pp.1061-1066. ⟨10.1007/s001220051387⟩ Article dans une revue istex hal-02123002v1
Suivi des introgressions dans les croisements interspécifiques chez le riz: utilisation des marqueurs moléculaires A Ghesquière,O Panaud,Philippe Marmey,Mc Gavalda,O Leblancet al. Genetics Selection Evolution, 1994, 26 (Suppl 1), pp.S67. ⟨10.1186/1297-9686-26-S1-S67⟩ Article dans une revue hal-03782059v1
Suivi des introgressions dans les croisements interspécifiques chez le riz : utilisation des marqueurs moléculaires A Ghesquière,O Panaud,P Marmey,Mc Gavalda,O Leblancet al. Genetics Selection Evolution, 1994, 26 (Suppl1), pp.67s-80s Article dans une revue hal-00894055v1

Poster de conférence (3)

Detection of transcriptomic structural variations in wild rice using Nanopore direct RNA sequencing. Marie-Christine Carpentier,Christel Llauro,Eric Lasserre,Marie Mirouze,Rod A. Winget al. JOBIM 2024: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2024, Jun 2024, TOULOUSE Université Paul Sabatier, France Poster de conférence hal-04919310v1
TEs as a major driver of genomic variation in trees ? Jumping MITEs in common beech revealed by TIPs and eccDNA Abirami Soundiramourtty,Lauren Clement,Christel Llauro,Olivier Panaud,Christophe Plomionet al. ICTE 2024 - International Congress on Transposable Elements, Apr 2024, Saint Malo, France. Poster de conférence hal-04907176v1
Structural variation involving transposable elements associated with grain width in cultivated rice. Marie-Christine Carpentier,Christel Llauro,Wan-Yi Qiu,Yue-Ie Hsing,Olivier Panaud JOBIM 2022: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2022, Jul 2022, RENNES, France Poster de conférence hal-04919402v1

Communication dans un congrès (6)

Croiser les approches du vivant : vers une écopoétique transdisciplinaire de la forêt Caroline Granger,Olivier Panaud,Bénédicte Meillon Journée d’études : Échos poétiques de la forêt, CRESEM-UPVD (Université Perpignan Via Domitia); OIKOS (Atelier de recherche en écopoétique, écocritique et écoanthropologie), 2022, Perpignan, France Communication dans un congrès hal-04301375v1
Using long-read nanopore sequencing to unravel structural genomic variations in plants Marie-Christine Carpentier,Hshin-Ping Wu,Fu-Jin Wei,Christel Llauro,Marie Mirouzeet al. Nanopore London Calling 2019, Oxford Nanopore, May 2019, Londres (UK), United Kingdom Communication dans un congrès hal-04919461v1
Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. 22nd National Congress on Transposable Elements - MobileET- Bioinformatics Days, Jul 2019, Lyon, France Communication dans un congrès hal-04919526v1
Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. Plant and Animal Genomics Conference XXVII, Jan 2019, SAN DIEGO CA, United States Communication dans un congrès hal-04919501v1
Sequencing mobilome reveals real time transposable element activity in plants and animals Marie Mirouze,Sophie Lanciano,Sophie Lanciano,Marie-Christine Carpentier,Christel Llauroet al. Conference on Epigenetic & Chromatin Regulation of Plant Traits, EpiTRAITS, Jan 2016, Strasbourg, France Communication dans un congrès hal-04908203v1
Contribution au developpement et a l'utilisation des cartes genetiques moleculaires en genetique des riz Gérard Second,Anna Ghesquiere,Mathilde M. Causse,O. Panaud Colloque international en hommage a Jean Pernes, Jan 1992, Paris, France Communication dans un congrès hal-02776970v1

Pré-publication, Document de travail (1)

Characterization Of Interspecific Gene Flows at The Genome-wide Level in a Natural Ecosystem The Massane Forest Reveals New Insights Into Horizontal Transfer In plants Emilie Aubin,Christel Llauro,Joseph Garrigue,Marie Mirouze,Olivier Panaudet al. 2022 Pré-publication, Document de travail (preprint/prepublication) hal-03852424v1

Chapitre d'ouvrage (3)

Genome-Wide Analysis of Transposition Using Next Generation Sequencing Technologies Moaine Elbaidouri,Olivier Panaud Plant Transposable Elements. Topics in Current Genetics, vol 24. Springer, Berlin, Heidelberg, pp.59-70, 2012 Chapitre d'ouvrage hal-02114320v1
Plant Transposable Elements Jean-Marc Deragon,J.M. Casacuberta,O. Panaud Plant Genomes, KARGER, pp.69-82, 2008, ⟨10.1159/000126007⟩ Chapitre d'ouvrage hal-04930917v1
From Rice to Other Cereals: Comparative Genomics Richard Cooke,Benoit Piegu,Olivier Panaud,Romain Guyot,Jérôme Salseet al. Rice Functional Genomics, Springer New York, pp.429-479, 2007 Chapitre d'ouvrage hal-02114392v1