Pierre-Antoine GOURRAUD

Publications

Article dans une revue (108)

Rethinking medical education through systems biology to address complexity Laurent David,Pierre-Antoine Gourraud,Guillaume Lamirault,Patricia Lemarchand npj Systems Biology and Applications, 2026, 12 (1), pp.12. ⟨10.1038/s41540-025-00636-5⟩ Article dans une revue inserm-05509929v1
Improving Social Determinants of Health Documentation in French EHRs Using Large Language Models Adrien Bazoge,Pacôme Constant Dit Beaufils,Mohammed Hmitouch,Romain Bourcier,Emmanuel Morinet al. Scientific Reports, 2025, 15 (45427), ⟨10.1038/s41598-025-29987-z⟩ Article dans une revue hal-05468221v1
Evaluating how different versions of ChatGPT align with expert opinions on geriatric script concordance tests Matthieu Lilamand,Théodore Decaix,Pierre-Antoine Gourraud,Richard Dufour,Gaëtan Gavazziet al. European Geriatric Medicine, 2025, Online ahead of print. ⟨10.1007/s41999-025-01334-5⟩ Article dans une revue inserm-05387147v1
Correction: Flexibility of a large blindly synthetized avatar database for occupational research: Example from the CONSTANCES cohort for stroke and knee pain Marc Fadel,Julien Petot,Pierre-Antoine Gourraud,Alexis d'Escatha PLoS ONE, 2025, 20 (5), pp.e0324790. ⟨10.1371/journal.pone.0324790⟩ Article dans une revue hal-05085469v1
Detection of Kidney Allograft Rejection Using Urinary Chemokines Valentin Goutaudier,Olivier Aubert,Maud Racapé,Agathe Truchot,Marta Sabliket al. Journal of the American Society of Nephrology, 2025, 36 (11), Online ahead of print. ⟨10.1681/ASN.0000000742⟩ Article dans une revue inserm-05269410v1
Microvascular Inflammation of Kidney Allografts and Clinical Outcomes Marta Sablik,Aurélie Sannier,Marc Raynaud,Valentin Goutaudier,Gillian Divardet al. New England Journal of Medicine, 2025, 392 (8), pp.763-776. ⟨10.1056/NEJMoa2408835⟩ Article dans une revue inserm-04810587v1
Durable B-Cell Impairment While Sparing IgA B Cells After Ocrelizumab Therapy in Multiple Sclerosis Alexandra Garcia,Stephane Rodriguez,Emilie Dugast,Christine Lebrun-Frénay,Eric Thouvenotet al. Annals of Clinical and Translational Neurology, In press, 12, pp.2271-2285. ⟨10.1002/acn3.70135⟩ Article dans une revue hal-05239596v1
Blood immunophenotyping of multiple sclerosis patients at diagnosis identifies a classical monocyte subset associated to disease evolution Stéphane Rodriguez,Laura Couloume,Juliette Ferrant,Nicolas Vince,Marion Mandonet al. Frontiers in Immunology, 2025, 15, pp.1494842. ⟨10.3389/fimmu.2024.1494842⟩ Article dans une revue hal-04920486v2
Assessing large language models for acute heart failure classification and information extraction from French clinical notes Adrien Bazoge,Matthieu Wargny,Pacôme Constant Dit Beaufils,Emmanuel Morin,Béatrice Dailleet al. Computers in Biology and Medicine, 2025, 195, pp.110609. ⟨10.1016/j.compbiomed.2025.110609⟩ Article dans une revue hal-05562572v1
Outcomes of transcatheter patent ductus arteriosus closure in infants weighing 2 to 6 kg Sophie Malekzadeh-Milani,Paul Padovani,Kothandam Sivakumar,Thomas Goronflot,Mathilde Méotet al. Revista Española de Cardiología (English version), 2025, pp.1885-5857. ⟨10.1016/j.rec.2025.09.011⟩ Article dans une revue hal-05380921v1
Stochastic Mixing and Differential Privacy in Utility-Preserving Data Anonymization Alban-Félix Barreteau,Eric Le Carpentier,Olivier Regnier-Coudert,Saïd Moussaoui,Pierre-Antoine Gourraud IEEE Workshop Statistical Signal Processing, 2025 Article dans une revue hal-05320109v1
Digital Representation of Patients as Medical Digital Twins: Data-Centric Viewpoint Stanislas Demuth,Jérôme de Sèze,Gilles Edan,Tjalf Ziemssen,Françoise Simonet al. JMIR Medical Informatics, 2025, 13, pp.e53542-e53542. ⟨10.2196/53542⟩ Article dans une revue inserm-04976312v1
Sepsis-trained macrophages promote antitumoral tissue-resident T cells Alexis Broquet,Victor Gourain,Thomas Goronflot,Virginie Le Mabecque,Debajyoti Sinhaet al. Nature Immunology, 2024, 25 (5), pp.802-819. ⟨10.1038/s41590-024-01819-8⟩ Article dans une revue hal-04571170v1
Antibody Mediated Rejection and T-cell Mediated Rejection Molecular Signatures Using Next-Generation Sequencing in Kidney Transplant Biopsies Esteban Cortes Garcia,Alessia Giarraputo,Maud Racapé,Valentin Goutaudier,Cindy Ursule-Dufaitet al. Transplant International, 2024, 37, pp.13043. ⟨10.3389/ti.2024.13043⟩ Article dans une revue hal-04997194v1
A multi‐ethnic reference panel to impute &lt;i&gt;HLA&lt;/i&gt; classical and non‐classical class I alleles in admixed samples: Testing imputation accuracy in an admixed sample from Brazil Nayane S B Silva,Sonia Bourguiba-Hachemi,Viviane a O Ciriaco,Stefan H Y Knorst,Ramon T Carmoet al. HLA: Immune Response Genetics, 2024, 103 (6), pp.e15543. ⟨10.1111/tan.15543⟩ Article dans une revue hal-04907532v1
Evaluation of non-invasive biomarkers of kidney allograft rejection in a prospective multicenter unselected cohort study (EU-TRAIN) Valentin Goutaudier,Richard Danger,Rusan Ali Catar,Maud Racapé,Aurélie Philippeet al. Kidney International, 2024, S0085-2538 (24), pp.00565-00569. ⟨10.1016/j.kint.2024.07.027⟩ Article dans une revue inserm-04712412v1
Clinical applications of deep learning in neuroinflammatory diseases: A scoping review S. Demuth,J. Paris,I. Faddeenkov,J. de Sèze,P.-A. Gourraud Revue Neurologique, 2024, S0035-3787 (24), pp.00522-8. ⟨10.1016/j.neurol.2024.04.004⟩ Article dans une revue inserm-04646029v1
Erosive toe-web intertrigo: Clinical features and management N. Jacob,O. Rousseau,V. Guardiolle,P.-A. Gourraud,F. Martinet al. Annales de Dermatologie et de Vénéréologie, 2024, 151 (3), pp.103263. ⟨10.1016/j.annder.2024.103263⟩ Article dans une revue hal-05072912v1
Disentangling Multiple Sclerosis heterogeneity in the French territory among genetic and environmental factors via Bayesian heritability analysis Andrea Nova,Sonia Bourguiba-Hachemi,Nicolas Vince,Pierre-Antoine Gourraud,Luisa Bernardinelliet al. Multiple Sclerosis and Related Disorders, 2024, 88, pp.105730. ⟨10.1016/j.msard.2024.105730⟩ Article dans une revue hal-04697138v1
Description and first insights on a large genomic biobank of lung transplantation Simon Brocard,Martin Morin,Nayane dos Santos Brito Silva,Benjamin Renaud-Picard,Benjamin Coiffardet al. European Journal of Human Genetics, 2024, pp.1-8. ⟨10.1038/s41431-024-01683-y⟩ Article dans une revue inserm-04712234v1
Flexibility of a large blindly synthetized avatar database for occupational research: Example from the CONSTANCES cohort for stroke and knee pain Marc Fadel,Julien Petot,Pierre-Antoine Gourraud,Alexis Descatha PLoS ONE, 2024, 19 (7), pp.e0308063. ⟨10.1371/journal.pone.0308063⟩ Article dans une revue hal-04683806v1
Implementing a Biomedical Data Warehouse From Blueprint to Bedside in a Regional French University Hospital Setting: Unveiling Processes, Overcoming Challenges, and Extracting Clinical Insight Matilde Karakachoff,Thomas Goronflot,Sandrine Coudol,Delphine Toublant,Adrien Bazogeet al. JMIR Medical Informatics, 2024, 12, pp.e50194-e50194. ⟨10.2196/50194⟩ Article dans une revue hal-05141517v1
Scoping review of clinical decision support systems for multiple sclerosis management: Leveraging information technology and massive health data Stanislas Demuth,Chadia Ed-Driouch,Cédric Dumas,David Laplaud,Gilles Edanet al. European Journal of Neurology, 2024, 32, pp.e16363. ⟨10.1111/ene.16363⟩ Article dans une revue inserm-04676399v1
The Ouest Data Hub: An Interregional Health Data Sharing Ecosystem for Research Marc Cuggia,Leslie Grammatico-Guillon,Pierre‐antoine Gourraud,Jean-Marie Chrétien,François Bocquetet al. Studies in Health Technology and Informatics, 2024, 316, pp.1679-1683. ⟨10.3233/shti240746⟩ Article dans une revue hal-04694424v1
Archetypal Analysis of Kidney Allograft Biopsies Using Next-generation Sequencing Technology Esteban Cortes Garcia,Alessia Giarraputo,Maud Racapé,Valentin Goutaudier,Cindy Ursule-Dufaitet al. Transplantation, 2024, 109 (5), pp.871-880. ⟨10.1097/TP.0000000000005181⟩ Article dans une revue hal-04996820v1
Design, cohort profile and comparison of the KTD-Innov study: a prospective multidimensional biomarker validation study in kidney allograft rejection Valentin Goutaudier,Marta Sablik,Maud Racapé,Olivia Rousseau,Benoît Audryet al. European Journal of Epidemiology, 2024, 39, pp.549-564. ⟨10.1007/s10654-024-01112-w⟩ Article dans une revue inserm-04595515v1
Immune Profiling Reveals the T-Cell Effect of Ocrelizumab in Early Relapsing-Remitting Multiple Sclerosis Alexandra Garcia,Emilie Dugast,Sita Shah,Jérémy Morille,Christine Lebrun-Frenayet al. Neurology Neuroimmunology & Neuroinflammation, 2023, 10 (3), pp.e200091. ⟨10.1212/NXI.0000000000200091⟩ Article dans une revue hal-04064282v1
Factors associated with early relapse of infantile haemangioma in children treated for at least six months with oral propranolol: A case-control study using the 2014-2021 French Ouest DataHub C Mauguen,A Maruani,Sébastien Barbarot,C Abasq,L Martinet al. Annales de Dermatologie et de Vénéréologie, 2023, 150 (3), pp.189-194. ⟨10.1016/j.annder.2023.03.007⟩ Article dans une revue hal-04117242v1
18th International HLA and Immunogenetics Workshop: Report on the SNP‐HLA Reference Consortium (SHLARC) component Nayane S B Silva,Sonia Bourguiba‐hachemi,Venceslas Douillard,Satu Koskela,Frauke Degenhardtet al. HLA: Immune Response Genetics, 2023, 103 (1), pp.e15293. ⟨10.1111/tan.15293⟩ Article dans une revue hal-05115333v1
Multiple sclerosis: Exploring the limits and implications of genetic and environmental susceptibility Douglas Goodin,Pouya Khankhanian,Pierre-Antoine Gourraud,Nicolas Vince PLoS ONE, 2023, 18 (6), pp.e0285599. ⟨10.1371/journal.pone.0285599⟩ Article dans une revue inserm-04214568v1
Strokecopilot: a literature-based clinical decision support system for acute ischemic stroke treatment Stanislas Demuth,Joris Müller,Véronique Quenardelle,Valérie Lauer,Roxana Gheocaet al. Journal of Neurology, 2023, 270 (12), pp.6113-6123. ⟨10.1007/s00415-023-11979-6⟩ Article dans une revue inserm-04240337v1
An automated histological classification system for precision diagnostics of kidney allografts Daniel Yoo,Valentin Goutaudier,Gillian Divard,Juliette Gueguen,Brad C. Astoret al. Nature Medicine, 2023, 29 (5), pp.1211-1220. ⟨10.1038/s41591-023-02323-6⟩ Article dans une revue inserm-04192806v1
Applying Natural Language Processing to Textual Data From Clinical Data Warehouses: Systematic Review Adrien Bazoge,Emmanuel Morin,Béatrice Daille,Pierre-Antoine Gourraud JMIR Medical Informatics, 2023, ⟨10.2196/42477⟩ Article dans une revue hal-04347465v1
Impact of the duration of oestradiol treatment on live birth rate in Hormonal Replacement Therapy cycle before frozen blastocyst transfer Juliette Joly,Thomas Goronflot,Arnaud Reignier,Martin Rosselot,Florence Leperlieret al. Human Fertility, 2023, pp.1-8. ⟨10.1080/14647273.2022.2163467⟩ Article dans une revue inserm-04061183v1
KiT-GENIE, the French genetic biobank of kidney transplantation Rokhaya Ba,Axelle Durand,Vincent Mauduit,Christine Chauveau,Stéphanie Le Bas-Bernardetet al. European Journal of Human Genetics, 2023, Online ahead of print. ⟨10.1038/s41431-023-01294-z⟩ Article dans une revue inserm-04099231v1
Identification of Novel Genetic Risk Factors for Focal Segmental Glomerulosclerosis in Children: Results From the Chronic Kidney Disease in Children (CKiD) Cohort Axelle Durand,Cheryl Winkler,Nicolas Vince,Venceslas Douillard,Estelle Geffardet al. American Journal of Kidney Diseases, 2023, 24 (1), pp.191. ⟨10.1053/j.ajkd.2022.11.003⟩ Article dans une revue inserm-04061037v1
Optimal population‐specific HLA imputation with dimension reduction Venceslas Douillard,Nayane dos Santos Brito Silva,Sonia Bourguiba‐hachemi,Michel S Naslavsky,Marilia O Scliaret al. HLA: Immune Response Genetics, 2023, 103 (1), ⟨10.1111/tan.15282⟩ Article dans une revue hal-05115050v1
Patient-centric synthetic data generation, no reason to risk re-identification in biomedical data analysis Morgan Guillaudeux,Olivia Rousseau,Julien Petot,Zineb Bennis,Charles-Axel Deinet al. npj Digital Medicine, 2023, 6 (1), pp.37. ⟨10.1038/s41746-023-00771-5⟩ Article dans une revue inserm-04139482v1
The Ogival Palate: A New Risk Marker of Sudden Unexpected Death in Infancy? Mathilde Ducloyer,Matthieu Wargny,Charlotte Medo,Pierre-Antoine Gourraud,Renaud Clementet al. Frontiers in Pediatrics, 2022, 10, pp.809725. ⟨10.3389/fped.2022.809725⟩ Article dans une revue hal-05008054v1
Multiple sclerosis clinical decision support system based on projection to reference datasets Chadia Ed-driouch,Florent Chéneau,Françoise Simon,Guillaume Pasquier,Benoit Combèset al. Annals of Clinical and Translational Neurology, 2022, 9 (12), pp.1863-1873. ⟨10.1002/acn3.51649⟩ Article dans une revue inserm-04004193v1
HLA‐EPI : A new EPIsode in exploring donor/recipient epitopic compatibilities Estelle Geffard,Léo Boussamet,Alexandre Walencik,Florent Delbos,Sophie Limouet al. HLA: Immune Response Genetics, 2022, 99 (2), pp.79-92. ⟨10.1111/tan.14505⟩ Article dans une revue hal-04230755v1
The Interaction between HLA‐DRB1 and Smoking in Parkinson's Disease Revisited Cloé Domenighetti,Venceslas Douillard,Pierre‐emmanuel Sugier,Ashwin Ashok Kumar Sreelatha,Claudia Schulteet al. Movement Disorders, 2022, 37 (9), pp.1929-1937. ⟨10.1002/mds.29133⟩ Article dans une revue hal-04335856v1
Peripheral blood immune cell profiling of acute corneal transplant rejection Jesper Hjortdal,Matthew D Griffin,Marion Cadoux,W John Armitage,Max Bylesjoet al. American Journal of Transplantation, 2022, 22 (10), pp.2337 - 2347. ⟨10.1111/ajt.17119⟩ Article dans une revue hal-03815377v1
Semi‐supervised clustering of quaternion time series: Application to gait analysis in multiple sclerosis using motion sensor data Pierre Drouin,Aymeric Stamm,Laurent Chevreuil,Vincent Graillot,Laetitia Barbinet al. Statistics in Medicine, 2022, pp.433-456. ⟨10.1002/sim.9625⟩ Article dans une revue hal-03895883v1
Distributing human leukocyte antigen HLA database in histocompatibility: a shift in HLA data governance Sirine Sayadi,Venceslas Douillard,Nicolas Vince,Mario Südholt,Pierre-Antoine Gourraud Exploration of Immunology, 2022, 2, pp.749-759. ⟨10.37349/ei.2022.00080⟩ Article dans une revue hal-03747555v1
Immune alveolitis in interstitial lung disease: an attractive cytological profile in immunocompromised patients Antoine Moui,Stéphanie Dirou,Christine Sagan,Renan Liberge,Claire Defranceet al. BMC Pulmonary Medicine, 2022, 22 (1), pp.79. ⟨10.1186/s12890-022-01871-w⟩ Article dans une revue inserm-03693149v1
Addressing the Challenges and Barriers to the Integration of Machine Learning into Clinical Practice: An Innovative Method to Hybrid Human–Machine Intelligence Chadia Ed-Driouch,Franck Mars,Pierre-Antoine Gourraud,Cédric Dumas Sensors, 2022, 22 (21), pp.8313. ⟨10.3390/s22218313⟩ Article dans une revue hal-03837932v1
Gait impairment monitoring in multiple sclerosis using a wearable motion sensor Pierre Drouin,Aymeric Stamm,Laurent Chevreuil,Vincent Graillot,Laetitia Barbinet al. Medical Case reports and Reviews, 2022, 5, pp.1-5. ⟨10.15761/MCRR.1000175⟩ Article dans une revue hal-03593194v1
Trans-ancestral fine-mapping of MHC reveals key amino acids associated with spontaneous clearance of hepatitis C in HLA-DQβ1 Ana Valencia,Candelaria Vergara,Chloe Thio,Nicolas Vince,Venceslas Douillardet al. American Journal of Human Genetics, 2022, 109 (2), pp.299-310. ⟨10.1016/j.ajhg.2022.01.001⟩ Article dans une revue hal-03661198v1
Linking Biomedical Data Warehouse Records With the National Mortality Database in France: Large-scale Matching Algorithm Vianney Guardiolle,Adrien Bazoge,Emmanuel Morin,Béatrice Daille,Delphine Toublantet al. JMIR Medical Informatics, 2022, 10 (11), pp.e36711. ⟨10.2196/36711⟩ Article dans une revue hal-03882497v2
Surfing the Big Data Wave: Omics Data Challenges in Transplantation Rokhaya Ba,Estelle Geffard,Venceslas Douillard,Françoise Simon,Laurent Mesnardet al. Transplantation, 2021, 106 (2), pp.e114 - e125. ⟨10.1097/tp.0000000000003992⟩ Article dans une revue inserm-03655070v1
The Caspase-1/IL-18 Axis of the Inflammasome in Tumor Cells: A Modulator of the Th1/Tc1 Response of Tumor-Infiltrating T Lymphocytes in Colorectal Cancer Linda Bilonda Mutala,Cécile Deleine,Matilde Karakachoff,Delphine Dansette,Kathleen Ducoinet al. Cancers, 2021, 13 (2), pp.189. ⟨10.3390/cancers13020189⟩ Article dans une revue inserm-03287920v1
Association between blastocyst morphology and maternal first trimester serum markers in ongoing pregnancies obtained after single fresh blastocyst transfer Audrey Pérennec,Arnaud Reignier,Thomas Goronflot,Pierre-Antoine Gourraud,Damien Massonet al. European Journal of Obstetrics & Gynecology and Reproductive Biology, 2021, 258, pp.63-69. ⟨10.1016/j.ejogrb.2020.12.043⟩ Article dans une revue hal-04707441v1
Predictors of hospital discharge and mortality in patients with diabetes and COVID-19: updated results from the nationwide CORONADO study Matthieu Wargny,Louis Potier,Pierre Gourdy,Matthieu Pichelin,Coralie Amadouet al. Diabetologia, 2021, 64 (4), pp.778-794. ⟨10.1007/s00125-020-05351-w⟩ Article dans une revue hal-03150687v1
Genetic susceptibility to multiple sclerosis in African Americans Douglas Goodin,Jorge Oksenberg,Venceslas Douillard,Pierre-Antoine Gourraud,Nicolas Vince PLoS ONE, 2021, 16 (8), pp.e0254945. ⟨10.1371/journal.pone.0254945⟩ Article dans une revue inserm-04276889v1
Robustness and relevance of predictive score in sudden cardiac death for patients with Brugada syndrome Vincent Probst,Thomas Goronflot,Soraya Anys,Romain Tixier,Jean Briandet al. European Heart Journal, 2021, 42 (17), pp.1687-1695. ⟨10.1093/eurheartj/ehaa763⟩ Article dans une revue hal-04003160v1
Location of intracranial aneurysms is the main factor associated with rupture in the ICAN population Olivia Rousseau,Matilde Karakachoff,Alban Gaignard,Lise Bellanger,Philippe Bijlengaet al. Journal of Neurology, Neurosurgery and Psychiatry, 2021, 92 (2), jnnp-2020-324371. ⟨10.1136/jnnp-2020-324371⟩ Article dans une revue hal-03033899v1
The nature of genetic and environmental susceptibility to multiple sclerosis Douglas Goodin,Pouya Khankhanian,Pierre-Antoine Gourraud,Nicolas Vince PLoS ONE, 2021, 16 (3), pp.e0246157. ⟨10.1371/journal.pone.0246157⟩ Article dans une revue inserm-04346737v2
High dimensional single-cell profiling identifies NK-like CD8+T cells with high cytotoxic properties that are the reservoir of clonal cells related to disease activity in multiple sclerosis E. Dugast,I. Vogel,E. Kervagoet,C. Monvoisin,A. Garciaet al. Multiple Sclerosis Journal, 2021, 27 (2_SUPPL), pp.81-82 Article dans une revue hal-03475065v1
Current HLA Investigations on SARS-CoV-2 and Perspectives Venceslas Douillard,Erick Castelli,Steven Mack,Jill Hollenbach,Pierre-Antoine Gourraudet al. Frontiers in Genetics, 2021, 12, pp.774922. ⟨10.3389/fgene.2021.774922⟩ Article dans une revue inserm-03627433v1
Genetic susceptibility to multiple sclerosis: interactions between conserved extended haplotypes of the MHC and other susceptibility regions D S Goodin,P Khankhanian,Pierre-Antoine Gourraud,Nicolas Vince BMC Medical Genomics, 2021, 14 (1), pp.183. ⟨10.1186/s12920-021-01018-6⟩ Article dans une revue inserm-03313792v1
Approaching Genetics Through the MHC Lens: Tools and Methods for HLA Research Venceslas Douillard,Erick Castelli,Steven Mack,Jill Hollenbach,Pierre-Antoine Gourraudet al. Frontiers in Genetics, 2021, 12, pp.774916. ⟨10.3389/fgene.2021.774916⟩ Article dans une revue inserm-03627830v1
Protocol of a multicentric prospective cohort study for the VALIDation of the IBD-disk instrument for assessing disability in inflammatory bowel diseases: the VALIDate study Catherine Le Berre,A. Bourreille,M. Flamant,G. Bouguen,L. Siproudhiset al. BMC Gastroenterology, 2020, 20 (1), ⟨10.1186/s12876-020-01246-7⟩ Article dans une revue hal-03287291v1
Biosensor vital sign detects multiple sclerosis progression Kristen M Krysko,Alireza Akhbardeh,Jennifer Arjona,Bardia Nourbakhsh,Emmanuelle Waubantet al. Annals of Clinical and Translational Neurology, 2020, 8 (1), pp.4-14. ⟨10.1002/acn3.51187⟩ Article dans une revue hal-04712597v1
Distribution of Bacterial α1,3-Galactosyltransferase Genes in the Human Gut Microbiome Emmanuel Montassier,Gabriel Al-Ghalith,Camille Mathé,Quentin Le Bastard,Venceslas Douillardet al. Frontiers in Immunology, 2020, 10, pp.3000. ⟨10.3389/fimmu.2019.03000⟩ Article dans une revue inserm-02490517v1
Impact of relative change in temperature and atmospheric pressure on acute aortic syndrome occurrence in france Guillaume Guimbretiere,Simon Nusinovici,Antoine Monnot,Jonathan Sobocinski,Thomas Senageet al. Scientific Reports, 2020, Scientific Reports, 10, pp.76. ⟨10.1038/s41598-019-56841-w⟩ Article dans une revue hal-04459301v1
SNP‐HLA Reference Consortium (SHLARC): HLA and SNP data sharing for promoting MHC‐centric analyses in genomics Nicolas Vince,Venceslas Douillard,Estelle Geffard,Diogo Meyer,Erick Castelliet al. Genetic Epidemiology, 2020, 44 (7), pp.733-740. ⟨10.1002/gepi.22334⟩ Article dans une revue hal-03336352v1
Differences Between Europe and the United States on AI/Digital Policy: Comment Response to Roundtable Discussion on AI Pierre-Antoine Gourraud,Francoise Simon Gender and the Genome, 2020, 4, pp.247028972090710. ⟨10.1177/2470289720907103⟩ Article dans une revue hal-05308509v1
VALIDation of the IBD-Disk Instrument for Assessing Disability in Inflammatory Bowel Diseases in a French Cohort: The VALIDate Study Catherine Le Berre,Mathurin Flamant,Guillaume Bouguen,Laurent Siproudhis,Marie Dewitteet al. Journal of Crohn's and Colitis, 2020, 14 (11), pp.1512-1523. ⟨10.1093/ecco-jcc/jjaa100⟩ Article dans une revue hal-03287277v1
MakAir, un ventilateur né de la pandémie COVID-19 conçu grâce à l’impression 3D, le numérique et l’open innovation Pierre-Antoine Gourraud,Mickaël Evenas,Corinne Lejus-Bourdeau,Baptiste Jamin,Gabriel Moneyronet al. Medecine de Catastrophe Urgences Collectives, 2020, 4, pp.233 - 240. ⟨10.1016/j.pxur.2020.08.017⟩ Article dans une revue hal-03493302v1
Association of HLA-DRB1*09:01 with tIgE levels among African ancestry individuals with asthma Nicolas Vince,Sophie Limou,Michelle Daya,Wataru Morii,Nicholas Rafaelset al. Journal of Allergy and Clinical Immunology, 2020, pp.S0091-6749(20)30098-1. ⟨10.1016/j.jaci.2020.01.011⟩ Article dans une revue inserm-02490604v1
Novel MS vital sign: multi‐sensor captures upper and lower limb dysfunction Alireza Akhbardeh,Jennifer Arjona,Kristen Krysko,Bardia Nourbakhsh,Pierre-Antoine Gourraudet al. Annals of Clinical and Translational Neurology, 2020, 7 (3), pp.288-295. ⟨10.1002/acn3.50988⟩ Article dans une revue inserm-02548879v1
Selective SIRPα blockade reverses tumor T cell exclusion and overcomes cancer immunotherapy resistance Vanessa Gauttier,Sabrina Pengam,Justine Durand,Kevin Biteau,Caroline Maryet al. Journal of Clinical Investigation, 2020, 130 (11), pp.6109-6123. ⟨10.1172/JCI135528⟩ Article dans une revue hal-03001660v1
The Rare IL22RA2 Signal Peptide Coding Variant rs28385692 Decreases Secretion of IL-22BP Isoform-1, -2 and -3 and Is Associated with Risk for Multiple Sclerosis Paloma Gómez-Fernández,Aitzkoa Lopez de Lapuente Portilla,Ianire Astobiza,Jorge Mena,Andoni Urtasunet al. Cells, 2020, 9 (1), pp.175. ⟨10.3390/cells9010175⟩ Article dans une revue hal-03464472v1
Genetic overlap between autoimmune diseases and non‐Hodgkin lymphoma subtypes Lennox Din,Mohammad Sheikh,Nikitha Kosaraju,Karin Ekström Smedby,Sasha Bernatskyet al. Genetic Epidemiology, 2019, ⟨10.1002/gepi.22242⟩ Article dans une revue inserm-02286174v1
Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility Nikolaos Patsopoulos,Sergio Baranzini,Adam Santaniello,Parisa Shoostari,Chris Cotsapaset al. Science, 2019, 365 (6460), ⟨10.1126/science.aav7188⟩ Article dans une revue hal-04578827v1
Easy-HLA, a validated web application suite to reveal the full details of HLA typing Estelle Geffard,Sophie Limou,Alexandre Walencik,Michelle Daya,Harold Watsonet al. Bioinformatics, 2019, pp.btz875. ⟨10.1093/bioinformatics/btz875⟩ Article dans une revue inserm-02414924v1
A systems biology approach uncovers cell-specific gene regulatory effects of genetic associations in multiple sclerosis Lohith Madireddy,Nikolaos A Patsopoulos,Chris Cotsapas,Steffan D Bos,Ashley Beechamet al. Nature Communications, 2019, 10, ⟨10.1038/s41467-019-09773-y⟩ Article dans une revue hal-04443990v1
Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations Michelle Daya,Nicholas Rafaels,Tonya Brunetti,Sameer Chavan,Albert Levinet al. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-08469-7⟩ Article dans une revue inserm-02146016v1
The MYRACLE protocol study: a multicentric observational prospective cohort study of patients with multiple myeloma Lina Benaniba,Benoit Tessoulin,Sabrina Trudel,Catherine Pellat-Deceunynck,Martine Amiotet al. BMC Cancer, 2019, 19 (1), pp.855. ⟨10.1186/s12885-019-6080-8⟩ Article dans une revue inserm-02290127v1
The GMO90+ Project: Absence of Evidence for Biologically Meaningful Effects of Genetically Modified Maize-based Diets on Wistar Rats After 6-Months Feeding Comparative Trial Xavier Coumoul,Rémi Servien,Ludmila Juricek,Yael Kaddouch-Amar,Yannick Lippiet al. Toxicological Sciences, 2019, 168 (2), pp.315-338. ⟨10.1093/toxsci/kfy298⟩ Article dans une revue hal-02196332v1
23rd Nantes Actualités Transplantation: &quot;Genomics and Immunogenetics of Kidney and Inflammatory Diseases-Lessons for Transplantation Nicolas Vince,Jérémie Poschmann,Régis Josien,Ignacio Anegon,Sophie Limouet al. Transplantation, 2019, 103 (5), ⟨10.1097/TP.0000000000002517⟩ Article dans une revue inserm-02156440v1
Highly conserved extended haplotypes of the major histocompatibility complex and their relationship to multiple sclerosis susceptibility Douglas S Goodin,Pouya Khankhanian,Pierre-Antoine Gourraud,Nicolas Vince PLoS ONE, 2018, 13 (2), pp.e0190043. ⟨10.1371/journal.pone.0190043⟩ Article dans une revue hal-01881148v1
Low-Frequency and Rare-Coding Variation Contributes to Multiple Sclerosis Risk Mitja Mitrovič,Nikolaos A Patsopoulos,Ashley H Beecham,Theresa Dankowski,An Goriset al. Cell, 2018, 175 (6), pp.1679 - 1687.e7. ⟨10.1016/j.cell.2018.09.049⟩ Article dans une revue hal-03464593v1
Subclinical Saccadic Eye Movement Dysfunction in Pediatric Multiple Sclerosis Andrew Yousef,Michael Devereux,Pierre Antoine Gourraud,Soren Jonzzon,Leena Suleimanet al. Journal of Child Neurology, 2018, 34 (1), pp.38-43. ⟨10.1177/0883073818807787⟩ Article dans une revue hal-04736182v1
High-dimensional profiling of single memory CD8+T cells reveals a specific pattern in multiple sclerosis patients. E. Dugast,I. Vogel,A. Garcia,B. Nicol,J. Morilleet al. Multiple Sclerosis Journal, 2018, 24, pp.93-94 Article dans une revue hal-01974926v1
Renal cortical volume: High correlation with pre- and post-operative renal function in living kidney donors Edouard Gardan,Lola Jacquemont,Christophe Perret,Pierre-Marie Heudes,Pierre-Antoine Gourraudet al. European Journal of Radiology, 2018, 99, pp.118--123. ⟨10.1016/j.ejrad.2017.12.013⟩ Article dans une revue hal-01881155v1
Electronic medical records in multiple sclerosis research Vincent Damotte,Pierre‐antoine Gourraud Clinical and Experimental Neuroimmunology, 2018, 9 (1), pp.13-18. ⟨10.1111/cen3.12441⟩ Article dans une revue hal-04792768v1
Genetic screening of male patients with primary hypogammaglobulinemia can guide diagnosis and clinical management Nicolas Vince,Gael Mouillot,Marion Malphettes,Sophie Limou,David Boutboulet al. Human Immunology, 2018, 79 (7), pp.571-577. ⟨10.1016/j.humimm.2018.04.014⟩ Article dans une revue hal-02135208v1
Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest Derek J Pappas,Antoine Lizee,Vanja Paunic,Karl R Beutner,Allan Motyeret al. Pharmacogenomics Journal, 2018, 18 (3), pp.367-376. ⟨10.1038/tpj.2017.7⟩ Article dans une revue inserm-02155110v1
Harnessing electronic medical records to advance research on multiple sclerosis Vincent Damotte,Antoine Lizee,Matthew Tremblay,Alisha Agrawal,Pouya Khankhanianet al. Multiple Sclerosis Journal, 2018, pp.135245851774740. ⟨10.1177/1352458517747407⟩ Article dans une revue hal-01881140v1
An intermediate level of CD161 expression defines a novel activated, inflammatory, and pathogenic subset of CD8+ T cells involved in multiple sclerosis Bryan Nicol,Marion Salou,Isabel Vogel,Alexandra Garcia,Emilie Dugastet al. Journal of Autoimmunity, 2018, GENOBIRD, 88, pp.61-74. ⟨10.1016/j.jaut.2017.10.005⟩ Article dans une revue hal-01833322v1
Multiple hot-deck imputation for network inference from RNA sequencing data Alyssa Imbert,Armand Valsesia,Caroline Le Gall,Claudia Armenise,Gregory Lefebvreet al. Bioinformatics, 2018, 34 (10), pp.1726 - 1732. ⟨10.1093/bioinformatics/btx819⟩ Article dans une revue hal-01794575v1
Deconditioning, fatigue and impaired quality of life in long-term survivors after allogeneic hematopoietic stem cell transplantation Stéphanie Dirou,Arnaud Chambellan,Patrice Chevallier,Patrick Germaud,Guillaume Lamiraultet al. Bone Marrow Transplantation, 2017, Epub ahead of print. ⟨10.1038/s41409-017-0057-5⟩ Article dans une revue inserm-01684314v1
Decrease of blood anti-alpha 1,3 Galactose Abs levels in multiple sclerosis (MS) and clinically isolated syndrome (CIS) patients L. Le Berre,J. Roussé,P-A Gourraud,B-M Imbert-Marcille,A. Salamaet al. Clinical Immunology, 2017, 180, pp.128-135. ⟨10.1016/j.clim.2017.05.006⟩ Article dans une revue hal-01560209v1
Gene-expression analysis of blood memory CD8(+)T cells at the single-cell level reveals a specific pattern of clonally expanded cells in multiple sclerosis patients E. Dugast,I. Vogel,A. Garcia,B. Nicol,J. Morilleet al. Multiple Sclerosis Journal, 2017, 23, pp.192-192. ⟨10.26226/morressier.59a3eda2d462b8028d8949aa⟩ Article dans une revue hal-01688649v1
The validation of the sit-to-stand test for COPD patients Arnaud Chambellan,Simon Nusinovici,Trija Vaidya,Pierre-Antoine Gourraud,Claire de Bisschop European Respiratory Journal, 2017, 50 (3), pp.1701203. ⟨10.1183/13993003.01203-2017⟩ Article dans une revue hal-03028041v1
High-Accuracy HLA Type Inference from Whole-Genome Sequencing Data Using Population Reference Graphs Alexander T Dilthey,Pierre-Antoine Gourraud,Alexander Mentzer,Nezih Cereb,Zamin Iqbalet al. PLoS Computational Biology, 2016, 12 (10), pp.e1005151. ⟨10.1371/journal.pcbi.1005151⟩ Article dans une revue inserm-02149588v1
The TRANSPLANTEX initiative Seiamak Bahram,Raphael Carapito,Pierre-Antoine Gourraud,Dominique Charron Human Immunology, 2016, 77 (11), pp.1005-1007. ⟨10.1016/j.humimm.2016.10.016⟩ Article dans une revue inserm-02149695v1
The killer immunoglobulin-like receptor KIR3DL1 in combination with HLA-Bw4 is protective against multiple sclerosis in African Americans Jill A Hollenbach,Marcelo J Pando,Stacy J Caillier,Pierre-Antoine Gourraud,Jorge R Oksenberg Genes and Immunity, 2016, 17 (3), pp.199-202. ⟨10.1038/gene.2016.5⟩ Article dans une revue inserm-02150105v1
Multidimensional reduction of multicentric cohort heterogeneity: An alternative method to increase statistical power and robustness Caroline Le Gall,Julie Laurent,Nicolas Vince,Antoine Lizee,Alisha Agrawalet al. Human Immunology, 2016, 77 (11), pp.1024-1029. ⟨10.1016/j.humimm.2016.05.013⟩ Article dans une revue istex inserm-02150107v1
A new classification of HLA-DRB1 alleles based on acid-base properties of the amino acids located at positions 13, 70 and 71: impact on ACPA status or structural progression, and meta-analysis on 1235 patients with rheumatoid from two cohorts (ESPOIR and EAC cohort). Adeline Ruyssen-Witrand,Hanna W van Steenbergen,Jurgen van Heemst,Pierre-Antoine Gourraud,Delphine Nigonet al. RMD Open : Rheumatic & Musculoskeletal Diseases, 2015, 1 (1), pp.e000099. ⟨10.1136/rmdopen-2015-000099⟩ Article dans une revue hal-01560005v1
Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis Ashley Beecham,Nikolaos Patsopoulos,Dionysia Xifara,Mary Davis,Anu Kemppinenet al. Nature Genetics, 2013, 45 (11), pp.1353-1360. ⟨10.1038/ng.2770⟩ Article dans une revue hal-02565210v1
Quantifying the use of bioresources for promoting their sharing in scientific research. Laurence Mabile,Raymond Dalgleish,Gudmundur Thorisson,Mylène Deschênes,Robert Hewittet al. GigaScience, 2013, 2 (1), pp.7. ⟨10.1186/2047-217X-2-7⟩ Article dans une revue inserm-00823375v1
Why Statistics Matter: Limited Inter-Rater Agreement Prevents Using the Psoriasis Area and Severity Index as a Unique Determinant of Therapeutic Decision in Psoriasis. Pierre-Antoine Gourraud,Caroline Le Gall,Eve Puzenat,François Aubin,Jean-Paul Ortonneet al. Journal of Investigative Dermatology, 2012, epub ahead of print. ⟨10.1038/jid.2012.124⟩ Article dans une revue hal-00719518v1
Galectin-1 is a powerful marker to distinguish chondroblastic osteosarcoma and conventional chondrosarcoma. Anne Gomez-Brouchet,Frédéric Mourcin,Pierre-Antoine Gourraud,Corinne Bouvier,Gonzague de Pinieuxet al. Human Pathology, 2010, epub ahead of print. ⟨10.1016/j.humpath.2009.10.028⟩ Article dans une revue istex hal-00507297v1
TRANSCRIPTOME ANALYSIS OF VENTILATOR ASSOCIATED PNEUMONIA IN TRAUMA PATIENTS THE SEPSICHIP PROJECT J. Textoris,Béatrice B. Loriod,L. Benayoun,O. Huet,P. -A. Gourraudet al. Intensive Care Medicine, 2009, 35, pp.90 Article dans une revue hal-01612146v1
A New Classification of HLA-DRB1 Alleles Differentiates Predisposing and Protective Alleles for Autoantibody Production in Rheumatoid Arthritis Pierre-Antoine Gourraud,Philippe Dieudé,Jean-Frédéric Boyer,Leonor Nogueira,Anne Cambon-Thomsenet al. Arthritis Research and Therapy, 2007, 9, pp.Pages 1208-1212. ⟨10.1186/ar2131⟩ Article dans une revue hal-02084374v1

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Recommandations de bonnes pratiques suite à l'analyse des questions éthiques soulevées par l'utilisation de l'Intelligence Artificielle dans la recherche à l'Inserm. Henri Atlan,Catherine Bourgain,Herve Chneiweiss,François Eisinger,Catherine Vidalet al. Guide de bonnes pratiques de l'Intelligence Artificielle à l'Inserm / Février 2025, 2025 Autre publication scientifique inserm-04975393v1
Joint memo from the Inserm Ethics Committee, the LORIER program, and the Inserm Scientific Advisory Board Henri Atlan,Catherine Bourgain,Herve Chneiweiss,François Eisinger,Catherine Vidalet al. Best practice recommendations using AI in Inserm Research / February 2025, 2025 Autre publication scientifique inserm-05003733v1

Poster de conférence (33)

Immunogenomic exploration in a large lung transplantation genetic cohort reveals a chronic lung allograft dysfunction association with HLA-DQB1*03:01 Simon Brocard,Assane Sylla,Nayane dos Santos Brito Silva,Pierre‐antoine Gourraud,Mario Südholtet al. EFI 2025 - 2ème Conférence Internationale sur l'Economie et la Finance Internationale, May 2025, Prague, Czech Republic. 2025 Poster de conférence hal-05095900v1
A large French genetic cohort to identify predictive molecular factors of chronic lung allograft dysfunction Simon Brocard,Martin Morin,Axelle Durand,Pierre‐antoine Gourraud,Mario Südholtet al. EFI 2023 Big Data In Immunogenetics At The Crossroad Of Care, Tools, And Research, Apr 2023, Nantes, France Poster de conférence hal-05031177v1
Identification of new NMOSD and MOGAD genetic associations Nicolas Vince,Irène Charles,Sonia Bourguiba-Hachemi,Sandra Vukusic,Lakhdar Banyahyaet al. 9th Joint ECTRIMS-ACTRIMS meeting, Oct 2023, Milan, Italy. Sage Publications Ltd, Multiple Sclerosis Journal, 29 (3S), pp.P125, 2023 Poster de conférence hal-04732129v1
The Intergretion of Human Intelligence into Artificial Intelligence to Provide Medical Practice-Based Predictions Chadia Ed-Driouch,Pierre-Antoine Gourraud,Cédric Dumas,Franck Mars The first International Conference on Hybrid Human-Artificial Intelligence, Jun 2022, Amsterdam, Netherlands Poster de conférence hal-03867655v1
FrenchMedMCQA: A French Multiple-Choice Question Answering Dataset for Medical domain Yanis Labrak,Adrien Bazoge,Richard Dufour,Béatrice Daille,Pierre‐antoine Gourraudet al. Empirical Methods in Natural Language Processing 2022, Dec 2022, Abu Dhabi, United Arab Emirates. , 2022 Poster de conférence hal-03913329v1
De la prise de décision à la communication avec le patient : mode dual de visualisation pour la gestion de la sclérose en plaque Chadia Ed-Driouch,Cédric Dumas,Franck Mars,Pierre-Antoine Gourraud 5ème journée interaction humain-machine et intelligence artificielle, Mar 2021, conférence en ligne, France Poster de conférence hal-03319735v1
The Rise of Connected Tools in Medicine : Evaluating Neurological Deficits in Lower Limbs With The MYO Armband in Multiple Sclerosis Patients Salimata Gassama,Nicolas Philippe,Konstantin Akhmadeev,Laura Souquières,Aya Housseinet al. 2020 Annual Meeting of American Academy of Neurology, Apr 2020, Toronto, Canada. Supplement 4552, 2020 Poster de conférence hal-02568724v1
Burrowing functional and immunogenetic information through the 1000 Genomes Project with Ferret v.3.0 R. Ba,N. Vince,E. Geffard,D. Malguid,M. Lanzaet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161081v1
Pioneer data-driven methods generating synthetic data: the HLA &quot;avatars&quot; are shifting paradigms in data sharing Estelle Geffard,Thomas Goronflot,Sophie Limou,Nicolas Vince,Matthieu Wargnyet al. European Federation for Immunogenetics (EFI) 2019, May 2019, Lisbonne, Portugal Poster de conférence inserm-02163126v1
Statistical inference of immunogenetic parameters reveals HLA-DRB1*11:01 allele associated with pediatric FSGS Axelle Durand,Cheryl A. Winkler,Nicolas Vince,Venceslas Douillard,Estelle Geffardet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161731v1
High-Dimensional Profiling of Single Memory CD8+T cells Reveals a Specific Pattern in Multiple Sclerosis Patients E. Dugast,I. Vogel,A. Renand,A. Garcia,B. Nicolet al. ARSEP Meeting, May 2019, Paris, France Poster de conférence inserm-02163232v1
Easy-HLA web application: new tools for HLA genotypes studies Léo Boussamet,Estelle Geffard,Alexandre Walencik,Sophie Limou,Pierre-Antoine Gourraudet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161735v1
Bridging Refract-Lyma and CHUN Clinical Data Warehouse: from a research cohort to a regional electronic medical record system and back Aimeric Dabin,Thomas Goronflot,Benoît Tessoulin,David Chiron,Anne Monlienet al. Journées ouvertes biologie, informatique et mathématiques (JOBIM) 2019, Jul 2019, Nantes, France Poster de conférence inserm-02163132v1
Development of a complete HLA analysis pipeline: HLA-Functional Immunogenomic eXploration (HLAfix) Ayan Ianniello,Sophie Limou,Estelle Geffard,Venceslas Douillard,Pierre-Antoine Gourraudet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161729v1
De-centralized database: new challenges to design innovative contextualization algorithms Axelle Durand,Estelle Geffard,Rokhaya Ba,Sophie Limou,Sophie Brouardet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161733v1
Exome sequencing in Hereditary Hypophosphatemic Rickets Raphaël Gaisne,Lucile Figueres,Pascal Houillier,Rosa Vargas-Poussou,Sandrine Lemoineet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161739v1
Navigating the treacherous waters of HLA imputation with the SHLARC (SNP-HLA Reference Consortium) Nicolas Vince,Venceslas Douillard,Estelle Geffard,Sophie Limou,Pierre-Antoine Gourraud JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161726v1
Development and validation of an alloscore in kidney transplantation Amandine Lecerf Defer,Laurent Mesnard,Pierre-Antoine Gourraud,Nicolas Vince,Sophie Limou JOBIM (Journées Ouvertes Biologie, Informatique et Mathématiques), Jul 2019, Nantes, France. ⟨10.1371/journal.pcbi.1005088⟩ Poster de conférence inserm-02161032v1
Genetic determinants of intracranial aneurysm (IA) in autosomal dominant polycystic kidney disease (PKD) Claire Leman,Raphaël Gaisne,Axelle Durand,Matilde Karakachoff,Romain Bourcieret al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161072v1
The SIRP gene family : widespread conservation in animals, haplotypic polymorphisms in humans and its therapeutic consequences for monoclonal antibody reactivity Rémi Guimon,Fabienne Haspot,Nicolas Poirier,Gilles Blancho,Sophie Limouet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161736v1
Epigenome-wide association study (EWAS) with HIV infection status Abel Garnier,Kevin Hoang,George Nelson,Nicolas Vince,Pierre-Antoine Gourraudet al. JOBIM, Jul 2019, Nantes, France Poster de conférence inserm-02161720v1
Harnessing the power of functional immunogenomics parameters to discover new associations with diseases Nicolas Vince,Estelle Geffard,Venceslas Douillard,Sophie Limou,Pierre-Antoine Gourraud Labex IGO meeting 2018, Apr 2018, Nantes, France Poster de conférence inserm-02161825v1
Epigenome-wide association study (EWAS) with HIV infection status Abel Garnier,Kevin Hoang,George Nelson,Nicolas Vince,Pierre-Antoine Gourraudet al. Labex IGO meeting 2018, Apr 2018, Nantes, France Poster de conférence inserm-02161806v1
HLA and asthma in the Consortium on Asthma among African-ancestry Populations in the Americas (CAAPA) Nicolas Vince,Sophie Limou,Michelle Daya,Nicholas Rafaels,Jill Hollenbachet al. Assises de génétique humaine et médicale 2018, Jan 2018, Nantes, France Poster de conférence inserm-02161772v1
Easy-HLA : an online software suite to reveal the full details of HLA typing for genetic analyses Estelle Geffard,Alexandre Walencik,Federico Garnier,Anne Cesbron,Nicolas Vinceet al. Assises de génétique humaine et médicale 2018, Jan 2018, Nantes, France Poster de conférence inserm-02161790v1
Ferret: a user­-friendly tool to extract data from the 1000 Genomes Project R. Ba,A. Taverner,N. Vince,P.-A. Gourraud,C.-A. Winkleret al. Labex IGO meeting 2018, Apr 2018, Nantes, France Poster de conférence inserm-02161817v1
Ferret: a user-friendly tool to extract data from the 1000 Genomes Project A. Taverner,O. Belkacem,E. Lam,N. Vince,P.-A. Gourraudet al. Assises de Génétique Humaine et Médicale, Jan 2018, Nantes, France Poster de conférence inserm-02163244v1
EasyMatch-R: a web application to facilitate donor query in Hematopoietic Stem Cell Transplantation Estelle Geffard,Alexandre Walencik,Sophie Limou,Anne Cesbron,Nicolas Vinceet al. Labex IGO meeting 2018, Apr 2018, Nantes, France Poster de conférence inserm-02161837v1
The Kidney transplantation application (KiTapp): A visualization and contextualization tool in a kidney graft patients' cohort Corentin Hervé,Nicolas Vince,Sophie Brouard,Magali Giral,Sophie Limouet al. EFI 2017, May 2017, Mannheim, Antigua and Barbuda Poster de conférence inserm-02161749v1
CD161 intermediate expression defines a novel activated, inflammatory and pathogenic subset of CD8+ T cells involved in multiple sclerosis B. Nicol,M. Salou,I. Vogel,A. Garcia,E. Dugastet al. ECTRIMS-ACTRIMS Meeting, Oct 2017, Paris, France Poster de conférence inserm-02163221v1
SNP-HLA Reference Consortium : HLA and SNP data sharing for promoting HLA centric analyses in genomics Nicolas Vince,Sophie Limou,Alexandre Walencik,Anne Cesbron,Estelle Geffardet al. EFI 2017, May 2017, Mannheim, Germany Poster de conférence inserm-02161745v1
Ferret: a user-friendly tool to extract data from the 1000 Genomes Project S. Limou,A. Taverner,N. Vince,P.-A. Gourraud,C.-A. Winkler EFI 2017, May 2017, Mannheim, Germany Poster de conférence inserm-02161754v1
Molecular analysis of blood memory CD8+T cells at the single-cell level reveals a specific pattern of clonally expanded cells in multiple sclerosis patients Emilie Dugast,Isabel Vogel,Alexandra Garcia,Bryan Nicol,Jérémy Morilleet al. ECTRIMS-ACTRIMS Meeting, Oct 2017, Paris, France Poster de conférence inserm-02163205v1

Communication dans un congrès (18)

DrBenchmark: A Large Language Understanding Evaluation Benchmark for French Biomedical Domain Yanis Labrak,Adrien Bazoge,Oumaima El Khettari,Mickaël Rouvier,Pacôme Constant Dit Beaufilset al. Fourteenth Language Resources and Evaluation Conference (LREC-COLING 2024), Nicoletta Calzolari; Min-Yen Kan, May 2024, Torino, Italy Communication dans un congrès hal-04470938v1
Genome-Wide Association Study of Chronic Lung Allograft Dysfunction Simon Brocard,Martin Morin,Axelle Durand,Nayane dos Santos Brito Silva,Vincent Mauduitet al. International Congress Lung Transplantation 2024, Sep 2024, Paris, France Communication dans un congrès hal-05030633v1
BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domains Yanis Labrak,Adrien Bazoge,Emmanuel Morin,Pierre‐antoine Gourraud,Mickaël Rouvieret al. 62th Annual Meeting of the Association for Computational Linguistics (ACL'24), Aug 2024, Bangkok, Thailand Communication dans un congrès hal-04621178v2
DrBERT: Un modèle robuste pré-entraîné en français pour les domaines biomédical et clinique Yanis Labrak,Adrien Bazoge,Richard Dufour,Mickael Rouvier,Emmanuel Morinet al. 18e Conférence en Recherche d'Information et Applications -- 16e Rencontres Jeunes Chercheurs en RI -- 30e Conférence sur le Traitement Automatique des Langues Naturelles -- 25e Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues, 2023, Paris, France. pp.109-120 Communication dans un congrès hal-04130214v1
DrBERT: A Robust Pre-trained Model in French for Biomedical and Clinical domains Yanis Labrak,Adrien Bazoge,Richard Dufour,Mickael Rouvier,Emmanuel Morinet al. 61th Annual Meeting of the Association for Computational Linguistics (ACL'23), Jul 2023, Toronto, Canada Communication dans un congrès hal-04056658v1
Genome-Wide Association Study of Chronic Lung Allograft Dysfunction Simon Brocard,Martin Morin,Axelle Durand,Nayane dos Santos Brito Silva,Vincent Mauduitet al. GO Immuno 2023, Dec 2023, Nantes, France Communication dans un congrès hal-05030599v1
The Integration of Human Intelligence into Artificial Intelligence to Provide Medical Practice-Based Predictions Chadia Ed-Driouch,Pierre-Antoine Gourraud,Cédric Dumas,Franck Mars Hybrid Human Artificial Intelligence (HHAI) 2022, Jun 2022, Amsterdam, Netherlands. pp.293-294, ⟨10.3233/FAIA220221⟩ Communication dans un congrès hal-03829412v1
NK-like CD8+T cells with high cytotoxic properties are the reservoir of clonal cells and related to disease activity in multiple sclerosis E Dugast,I Vogel,E Kervagoet,C Monvoisin,A Garciaet al. 38th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis, Oct 2022, Amsterdam, Netherlands. pp.231-231 Communication dans un congrès hal-04211145v1
Annotating a French Clinical Texts Corpus on Acute Heart Failure Adrien Bazoge,Matthieu Wargny,Samy Hadjadj,Thomas Goronflot,Emmanuel Morinet al. 32nd Medical Informatics Europe Conference, May 2022, Nice, France Communication dans un congrès hal-05570087v1
FrenchMedMCQA: A French Multiple-Choice Question Answering Dataset for Medical domain Yanis Labrak,Adrien Bazoge,Richard Dufour,Béatrice Daille,Pierre-Antoine Gourraudet al. LOUHI 2022 @ Empirical Methods in Natural Language Processing (EMNLP) 2022, Dec 2022, Abou Dhabi, United Arab Emirates Communication dans un congrès hal-03824241v2
Application de données synthétiques en aveugle : cas de données de la cohorte CONSTANCES Marc Fadel,Julien Petot,Pierre-Antoine Gourraud,Alexis Descatha 6 ème Journée de la recherche biomédicale Angers – Tours, Dec 2022, Angers, France Communication dans un congrès hal-03936574v1
L'interaction Homme-Machine au Service de la Médecine de Précision Chadia Ed-Driouch,Gilles Edan,Franck Mars,Cédric Dumas,Pierre-Antoine Gourraud Colloque, Machine quelle est ton humanité ?, Jun 2022, Nantes, France Communication dans un congrès hal-03715833v1
L'intelligence hybride pour prédire l'évolution des maladies chroniques Chadia Ed-Driouch,Franck Mars,Pierre-Antoine Gourraud,Cédric Dumas IHM 2022 : 33ème Conference Francophone sur l'Interaction Humain-Machine, Apr 2022, Namur, Belgique. ⟨10.1145/3502178.3529109⟩ Communication dans un congrès hal-03656359v1
Secure distribution of Factor Analysis of Mixed Data (FAMD) and its application to personalized medicine of transplanted patients Sirine Sayadi,Estelle Geffard,Mario Südholt,Nicolas Vince,Pierre-Antoine Gourraud AINA 2021: 35th International Conference on Advanced Information Networking and Applications, May 2021, Toronto, Canada. ⟨10.1007/978-3-030-75100-5_44⟩ Communication dans un congrès hal-03141653v1
Distributed Contextualization of Biomedical Data: a case study in precision medicine Sirine Sayadi,Estelle Geffard,Mario Südholt,Nicolas Vince,Pierre-Antoine Gourraud AICCSA 2020 - 17th IEEE/ACS International Conference on Computer Systems and Applications, Nov 2020, Antalya, Turkey. pp.1-6, ⟨10.1109/AICCSA50499.2020.9316502⟩ Communication dans un congrès hal-02922930v1
Multiple hot-deck imputation for network inference from RNA sequencing data Alyssa Imbert,Armand Valsesia,Claudia Armenise,Gregory Lefebvre,Pierre-Antoine Gourraudet al. European Conference on Computational Biology (ECCB 2018), Sep 2018, Athènes, Greece Communication dans un congrès hal-02788524v1
SVM-based Tool to Detect Patients with Multiple Sclerosis Using a Commercial EMG Sensor Konstantin Akhmadeev,Aya Houssein,Saïd Moussaoui,Einar August Høgestøl,Ingerid Tutturenet al. 2018 IEEE 10th Sensor Array and Multichannel Signal Processing Workshop, Jul 2018, Sheffield, United Kingdom. ⟨10.1109/sam.2018.8448391⟩ Communication dans un congrès hal-01847078v1
Imputation de données manquantes pour l'inférence de r éseau à partir de données RNA-seq Alyssa Imbert,Caroline Le Gall,Claudia Armenise,Gregory Lefebvre,Jorg Hageret al. 48e Journées de la Société Française de Statistique, May 2016, Montpellier, France Communication dans un congrès hal-01325523v1