Patricia BONIN

Identifiants chercheurs

IdHAL :

patricia-bonin

ORCID :

0000-0002-4194-7343

IdRef :

133168522

ResearcherID :

http://www.researcherid.com/rid/AAA-4462-2021

Présentation

Institut Méditerranéen Océanographie

Publications

Article dans une revue (82)

Distinct contributions of suspended and sinking prokaryotes to mesopelagic carbon budget Pauline Le Coq,Urania Christaki,France van Wambeke,Elisabeth Chevillon,Bruno Zakardjianet al. Nature Geoscience, 2026, 19, pp.165-172. ⟨10.1038/s41561-025-01888-w⟩ Article dans une revue hal-05454176v1
Do carotenoids protect phytodetritus-associated bacteria from oxidative stress? Gwénola Simon,Laurie Casalot,Corinne Valette,Christopher Burot,Jean François Rontaniet al. Environmental Science and Pollution Research, 2025, 32 (17), pp.11167-11178. ⟨10.1007/s11356-025-36080-5⟩ Article dans une revue hal-05387532v1
Cellular Damage of Bacteria Attached to Senescent Phytoplankton Cells as a Result of the Transfer of Photochemically Produced Singlet Oxygen: A Review Jean-François Rontani,Patricia Bonin Microorganisms, 2023, 11 (6), pp.1565. ⟨10.3390/microorganisms11061565⟩ Article dans une revue hal-04286728v1
Biological mechanisms underlying priming of vascular plant material in the presence of diatoms Patricia Bonin,Aurélie Portas,Julie Hardy,Sophie Guasco,Ts Bianchiet al. Aquatic Microbial Ecology, 2023, 89, pp.99-117. ⟨10.3354/ame01999⟩ Article dans une revue hal-04286759v1
Singlet oxygen‐induced alteration of bacteria associated with phytodetritus: Effect of irradiance Christopher Burot,Patricia Bonin,Gwénola Simon,Laurie Casalot,Jean‐françois Rontani Journal of Phycology, 2023, 59 (5), pp.980-988. ⟨10.1111/jpy.13376⟩ Article dans une revue hal-04286500v1
Dry-Wet Cycles Affect Nitrous Oxide Emissions Across Aquatic-Terrestrial Interfaces: A Mesocosms Study Renata Pinto,Gabriele Weigelhofer,Matthias Pucher,Rebecca Clare Hood-Nowotny,Patricia Boninet al. Frontiers in Soil Science, 2022, 2, ⟨10.3389/fsoil.2022.849210⟩ Article dans une revue hal-03844523v1
The role of coupled DNRA-Anammox during nitrate removal in a highly saline lake N. Valiente,F. Jirsa,T. Hein,W. Wanek,J. Prommeret al. Science of the Total Environment, 2022, 806, pp.150726. ⟨10.1016/j.scitotenv.2021.150726⟩ Article dans une revue hal-03427431v1
Ecosystem maturity modulates greenhouse gases fluxes from artificial lakes Fanny Colas,Jean-Marc Baudoin,Patricia Bonin,Léa Cabrol,Martin Daufresneet al. Science of the Total Environment, 2021, 760, pp.144046. ⟨10.1016/j.scitotenv.2020.144046⟩ Article dans une revue hal-03110280v1
Use of Stress Signals of Their Attached Bacteria to Monitor Sympagic Algae Preservation in Canadian Arctic Sediments Rémi Amiraux,Patricia Bonin,Christopher Burot,Jean-Francois Rontani Microorganisms, 2021, 9 (12), pp.2626. ⟨10.3390/microorganisms9122626⟩ Article dans une revue hal-03525505v1
Benthic oxygen dynamics and implication for the maintenance of chronic hypoxia and ecosystem degradation in the Berre lagoon (France) Sylvain Rigaud,Bruno Deflandre,Christian Grenz,Florian Cesbron,Lara Pozzatoet al. Estuarine, Coastal and Shelf Science, 2021, 258, pp.107437. ⟨10.1016/j.ecss.2021.107437⟩ Article dans une revue hal-03249104v1
Similar Methanogenic Shift but Divergent Syntrophic Partners in Anaerobic Digesters Exposed to Direct versus Successive Ammonium Additions Julie Hardy,Patricia Bonin,Adele Lazuka,Estelle Gonidec,Sophie Guascoet al. Microbiology Spectrum, 2021, 9 (2), ⟨10.1128/Spectrum.00805-21⟩ Article dans une revue hal-03435672v1
Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean) Christopher Burot,Rémi Amiraux,Patricia Bonin,Sophie Guasco,Marcel Babinet al. Science of the Total Environment, 2021, 770, pp.145252. ⟨10.1016/j.scitotenv.2021.145252⟩ Article dans une revue hal-03154542v1
Identification of enriched hyperthermophilic microbial communities from a deep-sea hydrothermal vent chimney under electrolithoautotrophic culture conditions Guillaume Pillot,Oulfat Amin Ali,Sylvain Davidson,Laetitia Shintu,Anne Godfroyet al. Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-94135-2⟩ Article dans une revue hal-03427430v1
Evolution of Thermophilic Microbial Communities from a Deep-Sea Hydrothermal Chimney under Electrolithoautotrophic Conditions with Nitrate Guillaume Pillot,Oulfat Amin Ali,Sylvain Davidson,Laetitia Shintu,Yannick Combet-Blancet al. Microorganisms, 2021, 9 (12), pp.2475. ⟨10.3390/microorganisms9122475⟩ Article dans une revue hal-03563636v1
Bacterial diversity and lipid biomarkers in sea ice and sinking particulate organic material during the melt season in the Canadian Arctic Rémi Amiraux,Jean-Francois Rontani,Fabrice Armougom,Eléonore Frouin,Marcel Babinet al. Elementa: Science of the Anthropocene, 2021, 9 (1), ⟨10.1525/elementa.2019.040⟩ Article dans une revue hal-03424293v1
Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation Christian Tamburini,Marc Garel,Aude Barani,Dominique Boeuf,Patricia Boninet al. Water, 2021, 13 (19), pp.2616. ⟨10.3390/w13192616⟩ Article dans une revue hal-03356668v1
Evolution of Thermophilic Microbial Communities from a Deep-Sea Hydrothermal Chimney under Electrolithoautotrophic Conditions with Nitrate Guillaume Pillot,Oulfat Amin Ali,Sylvain Davidson,Laetitia Shintu,Yannick Combet-Blancet al. Microorganisms, 2021, 9 (12), pp.2475. ⟨10.3390/microorganisms9122475⟩ Article dans une revue hal-03427429v1
Stress factors resulting from the Arctic vernal sea-ice melt Rémi Amiraux,Christopher Burot,Patricia Bonin,Guillaume Massé,Sophie Guascoet al. Elementa: Science of the Anthropocene, 2020, 8 (1), ⟨10.1525/elementa.076⟩ Article dans une revue hal-03458308v1
Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning Johanne Aubé,Pavel Senin,Patricia Bonin,Olivier Pringault,Céline Jeziorskiet al. Microbial ecology, 2020, 80 (2), pp.286-295. ⟨10.1007/s00248-020-01493-x⟩ Article dans une revue hal-03065790v1
Oxygen and light determine the pathways of nitrate reduction in a highly saline lake Nicolás Valiente,Franz Jirsa,Thomas Hein,Wolfgang Wanek,Patricia Boninet al. Biogeosciences, 2020, ⟨10.5194/bg-2020-20⟩ Article dans une revue hal-03022672v1
Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions Marc Garel,Patricia Bonin,Severine Martini,Sophie Guasco,Marie Roumagnacet al. Frontiers in Microbiology, 2019, 10, pp.453. ⟨10.3389/fmicb.2019.00453⟩ Article dans une revue hal-02094373v1
Enhancement of biotic degradation of terrestrial particulate organic matter in an estuarine salinity gradient: Interactive effects of organic matter pools and changes of bacterial communities. Patricia Bonin,Anne-Hélène Prime,Mairie-Aimée Galeron,Sophie Guasco,Jean-Francois Rontani Aquatic Microbial Ecology, 2019, 83 (2), pp.147 - 159. ⟨10.3354/ame01908⟩ Article dans une revue hal-03019979v1
The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3 Axel Aigle,Patricia Bonin,Nicolas Fernandez -Nunez,Béatrice B. Loriod,Sophie Guascoet al. FEMS Microbiology Letters, In press, ⟨10.1093/femsle/fny068⟩ Article dans une revue hal-01766209v1
Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community Imen Zaghmouri,Valerie Michotey,Fabrice Armougom,Sophie Guasco,Patricia Bonin Marine Pollution Bulletin, 2018, 130, pp.76 - 83. ⟨10.1016/j.marpolbul.2018.03.020⟩ Article dans une revue hal-01735881v1
Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3 Axel Aigle,Patricia Bonin,Chantal Iobbi-Nivol,Vincent Méjean,Valerie Michotey Scientific Reports, 2017, Scientific Reports 7, 7, ⟨10.1038/srep44725⟩ Article dans une revue hal-01493279v1
Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers Remi Amiraux,Simon Belt,Frederic Vaultier,Virginie Galindo,Michel Gosselinet al. Marine Chemistry, 2017, 194, pp.89-99. ⟨10.1016/j.marchem.2017.05.006⟩ Article dans une revue hal-02325940v1
The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats Johanne Aubé,Pavel Senin,Olivier Pringault,Patricia Bonin,Bruno Deflandreet al. Marine Pollution Bulletin, 2016, 111 (1-2), pp.115-125. ⟨10.1016/j.marpolbul.2016.07.023⟩ Article dans une revue istex ird-02048573v1
Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey Severine Martini,Valerie Michotey,Laurie Casalot,Patricia Bonin,Sophie Guascoet al. Deep Sea Research, 2016, 116, pp.33-40. ⟨10.1016/j.dsr.2016.07.014⟩ Article dans une revue hal-01408722v1
Coupling of bacterial nitrification with denitrification and anammox supports N removal in intertidal sediments (Arcachon Bay, France) Sheryl Fernandes,Cedric Javanaud,Valerie Michotey,Sophie Guasco,Pierre Anschutzet al. Estuarine, Coastal and Shelf Science, 2016, 179, pp.39-50. ⟨10.1016/j.ecss.2015.10.009⟩ Article dans une revue hal-01408734v1
Denitrification activity in mangrove sediments varies with associated vegetation Sheryl Oliveira Fernandes,Pinky Dutta,Maria-Judith Gonsalves,Patricia Bonin,P. A. Lokabharathi Ecological Engineering, 2016, 95, pp.671-681. ⟨10.1016/j.ecoleng.2016.06.102⟩ Article dans une revue hal-01443226v1
Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players? Cécile Militon,Alexandre Atkinson,Valerie Michotey,Celine Jeziorski,Cristiana Cravo-Laureauet al. Marine Genomics, 2016, 29, pp.55-59. ⟨10.1016/j.margen.2016.06.006⟩ Article dans une revue istex hal-01408732v1
Anaerobic nitrification-denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N-2 and N2O production Sheryl Fernandes,Cedric Javanaud,Axel Aigle,Valerie Michotey,Sophie Guascoet al. Journal of Marine Systems, 2015, 144, pp.1-8. ⟨10.1016/j.jmarsys.2014.11.011⟩ Article dans une revue hal-01157960v1
Dynamic of bacterial communities attached to lightened phytodetritus Morgan Petit,Patricia Bonin,Remi Amiraux,Valerie Michotey,Sophie Guascoet al. Environmental Science and Pollution Research, 2015, 22 (18), pp.13681-92. ⟨10.1007/s11356-015-4209-0⟩ Article dans une revue hal-01201708v1
Complete genome sequence of a new member of the Marseilleviridae recovered from the Brackish submarine spring in the Cassis Port-Miou Calanque, France Gabriel Doutre,Bruno Arfib,Pierre Rochette,Jean-Michel Claverie,Patricia Boninet al. Genome Announcements, 2015, 3 (6), pp.e01148--15. ⟨10.1128/genomeA.01148-15⟩ Article dans une revue hal-01457497v1
Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp. Patricia Bonin,Agnès Groisillier,Alice Raimbault,Anaïs Guibert,Catherine Boyenet al. Phytochemistry, 2015, 117, pp.509-520. ⟨10.1016/j.phytochem.2015.07.015⟩ Article dans une revue hal-01200617v1
Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor. Cécile Militon,Olfa Hamdi,Valerie Michotey,Marie-Laure Fardeau,Bernard Ollivieret al. Environmental Science and Pollution Research, 2015, pp.2015 Jul 22. ⟨10.1007/s11356-015-4973-x⟩ Article dans une revue hal-01201712v1
Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes. Olfa Hamdi,Wajdi Ben Hania,Anne Postec,Hassib Bouallagui,Moktar Hamdiet al. International Journal of Systematic and Evolutionary Microbiology, 2015, 65 (Pt 2), pp.609-14. ⟨10.1099/ijs.0.068965-0⟩ Article dans une revue hal-01177834v1
Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments. Robert Duran,Patricia Bonin,Ronan Jezequel,Karine Dubosc,Claire Gassieet al. Environmental Science and Pollution Research, 2015, 22 (20), pp.15248-15259. ⟨10.1007/s11356-015-4373-2⟩ Article dans une revue hal-01201709v1
Environmental microbiology reveals the Earth secret life Denis Faure,Patricia Bonin,Robert Duran Environmental Science and Pollution Research, 2015, 22 (18), pp.13573-6. ⟨10.1007/s11356-015-4968-7⟩ Article dans une revue hal-01201676v1
Microbial ecology of hydrocarbon-polluted coastal sediments. Robert Duran,Philippe Cuny,Patricia Bonin,Cristiana Cravo-Laureau Environmental Science and Pollution Research, 2015, 22 (20), pp.15195 - 15199. ⟨10.1007/s11356-015-5373-y⟩ Article dans une revue hal-01208482v1
Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus. Patricia Bonin,Christophe Vieira,Régis Grimaud,Cécile Militon,Philippe Cunyet al. Environmental Science and Pollution Research, 2015, 22 (20), pp.15347-15359. ⟨10.1007/s11356-014-4009-y⟩ Article dans une revue hal-01201711v1
Draft-genome sequence of Shewanella algae strain C6G3 Axel Aigle,Valerie Michotey,Patricia Bonin Standards in Genomic Sciences, 2015, 43 (10), pp.10.1186/s40793-015-0022-0. ⟨10.1186/s40793-015-0022-0⟩ Article dans une revue hal-01194459v1
Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos. Philippe Cuny,Franck Gilbert,Cécile Militon,Georges Stora,Patricia Boninet al. Environmental Science and Pollution Research, 2015, 22 (20), pp.15370-15376. ⟨10.1007/s11356-015-4800-4⟩ Article dans une revue hal-01201710v1
Environmental microbiology as a mosaic of explored ecosystems and issues Denis Faure,Patricia Bonin,Robert Duran,Pierre Amato,Florence Arsene-Ploetzeet al. Environmental Science and Pollution Research, 2015, 22 (18), pp.13577-13598. ⟨10.1007/s11356-015-5164-5⟩ Article dans une revue hal-01247096v1
Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India). Sheryl Fernandes,David L Kirchman,Valerie Michotey,Patricia Bonin,P A Lokabharathi Brazilian Journal of Microbiology, 2014, 45 (4), pp.1161-71. ⟨10.1590/S1517-83822014000400006⟩ Article dans une revue hal-01166877v1
Mannitol metabolism in brown algae involves a new phosphatase family. Agnès Groisillier,Zhanru Shao,Gurvan Michel,Sophie Goulitquer,Patricia Boninet al. Journal of Experimental Botany, 2014, 65 (2), pp.559-70. ⟨10.1093/jxb/ert405⟩ Article dans une revue hal-01002445v1
Trends in salinity and inorganic nitrogen compounds in the Berre lagoon (1994-2011) bacterial activities and nitrogen budgets Imen Zaghmouri,Valerie Michotey,Sophie Guasco,Patrick Raimbault,Nicole Garciaet al. Marine Pollution Bulletin, 2013, 67, pp.55-65. ⟨10.1016/j.marpolbul.2012.11.046⟩ Article dans une revue istex hal-00796981v1
Denitrification activity is closely linked to the total ambient Fe concentration in mangrove sediments of Goa, India S Fernandes,M Gonsalves,Valerie Michotey,Patricia Bonin,P Lokabharathi Estuarine, Coastal and Shelf Science, 2013, 131, pp.64-74. ⟨10.1016/j.ecss.2013.08.008⟩ Article dans une revue istex hal-00872344v1
Anaerobic bacterial degradation of pristenes and phytenes in marine sediments does not lead to pristane and phytane during early diagenesis Jean-Francois Rontani,Patricia Bonin,Sophie Guasco,Frederic Vaultier,John K. Volkman Organic Geochemistry, 2013, 58, pp.43-55 Article dans une revue hal-00807479v1
Mimicking floodplain reconnection and disconnection using &lt;sup&gt;15&lt;/sup&gt;N mesocosm incubations N. Welti,E. Bondar-Kunze,M. Mair,Patricia Bonin,W. Waneket al. Biogeosciences, 2012, 9 (11), pp.4263-4278. ⟨10.5194/bg-9-4263-2012⟩ Article dans une revue hal-01097829v1
Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds R. Grimaud,J.-F. Ghiglione,Christine Cagnon,Béatrice Lauga,P.-J. Vaysseet al. Journal of Bacteriology, 2012, 194 (13), pp.3539-3540. ⟨10.1128/JB.00500-12⟩ Article dans une revue hal-01643936v1
Desulfosoma profundi sp nov., a thermophilic sulfate-reducing bacterium isolated from a deep terrestrial geothermal spring in France Patrick Gregoire,Marie Laure Fardeau,Sophie Guasco,Joel Lagiere,Jean Cambaret al. Antonie van Leeuwenhoek, 2012, 101, pp.595-602. ⟨10.1007/s10482-011-9675-x⟩ Article dans une revue istex hal-00690553v1
Spatio-temporal diversity of free-living and particle-attached prokaryotes in the tropical lagoon of Ahe atoll (Tuamotu Archipelago) and its surrounding oceanic waters Valerie Michotey,Sophie Guasco,Dominique Boeuf,Nicola Morezzi,Brice Durieuet al. Marine Pollution Bulletin, 2012, 65 (10), pp.525-537. ⟨10.1016/j.marpolbul.2012.01.009⟩ Article dans une revue istex hal-00739805v1
Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium Sheryl Fernandes,Patricia Bonin,Valerie Michotey,Nicole Garcia,P. A. Lokabharathi Scientific Reports, 2012, 2, pp.419. ⟨10.1038/srep00419⟩ Article dans une revue hal-00714213v1
Denitrification prevails over anammox in tropical mangrove sediments (Goa, India) Sheryl Fernandes,Valerie Michotey,Sophie Guasco,Patricia Bonin,P. A. Loka Bharathi Marine Environmental Research, 2012, 74, pp.9-19. ⟨10.1016/j.marenvres.2011.11.008⟩ Article dans une revue istex hal-00700304v1
Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp nov., a thermophilic anaerobic bacterium pertaining to the phylum &quot;Chloroflexi&quot;, isolated from a deep hot aquifer in the Aquitaine Basin Patrick Gregoire,Marie Laure Fardeau,Manon Bartoli,Sophie Guasco,Francette Hamaideet al. Systematic and Applied Microbiology, 2011, 34, pp.494-497. ⟨10.1016/j.syapm.2011.02.004⟩ Article dans une revue istex hal-00690513v1
Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp. nov., a thermophilic anaerobic bacterium pertaining to the phylum &quot;Chloroflexi&quot;, isolated from a deep hot aquifer in the Aquitaine Basin. Patrick Gregoire,Marie Laure Fardeau,Manon Joseph,Sophie Guasco,F Hamaideet al. Systematic and Applied Microbiology, 2011, 34 (7), pp.494-7 Article dans une revue hal-00752926v1
Anaerobic ammonium oxidation mediated by Mn-oxides: from sediment to strain level Cedric Javanaud,Valerie Michotey,Sophie Guasco,Nicole Garcia,Pierre Anschutzet al. Research in Microbiology, 2011, 162, pp.848-857. ⟨10.1016/j.resmic.2011.01.011⟩ Article dans une revue istex hal-00725010v1
Caldilinea tarbellica sp nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin Patrick Gregoire,Malek Bohli,Jean Luc Cayol,Manon Bartoli,Sophie Guascoet al. International Journal of Systematic and Evolutionary Microbiology, 2011, 61 (Part6), pp.1436-1441. ⟨10.1099/ijs.0.025676-0⟩ Article dans une revue hal-00752944v1
Denitrification : An important Pathway for Nitrous Oxide Production in Tropical Mangrove Sediments (Goa, India) Sheryl Oliveira Fernandes,P.A. Loka Bharathi,Patricia Bonin,Valerie Michotey Journal of Environmental Quality, 2010, 39, pp.1507-1516. ⟨10.2134/jeq2009.0477⟩ Article dans une revue hal-00506441v1
Potential alteration of UK37 paleothermometer due to selective degradation of alkenones by marine bacteria isolated from the haptophyte Emiliania huxleyi Nathalie Zabeti,Patricia Bonin,John Kingston Volkmann,Ian D. Jameson,Sophie Guascoet al. FEMS Microbiology Ecology, 2010, 73, pp.83-94. ⟨10.1111/j.1574-6941.2010.00885.x⟩ Article dans une revue hal-00538049v1
Fatty acid composition of bacterial strains associated with living cells of the haptophyte Emiliania huxleyi Nathalie Zabeti,Patricia Bonin,John K. Volkman,Sophie Guasco,Jean-Francois Rontani Organic Geochemistry, 2010, 41, pp.627-636. ⟨10.1016/j.orggeochem.2010.04.009⟩ Article dans une revue istex hal-00538052v1
Caldinitratiruptor microaerophilus, gen.nov., sp. nov. isolated from a French hot spring (Chaudes-Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes Marie-Laure Fardeau,Vanessa Barsotti,Jean-Luc Cayol,Sophie Guasco,Valerie Michoteyet al. Extremophiles, 2010, 14, pp.241-247. ⟨10.1007/s00792-010-0302-y⟩ Article dans une revue istex hal-00506433v1
Seasonal variation in di-nitrogen fluxes and associated processes (denitrification, anammox and nitrogen fixation) in sediment subject to shellfish farming influences Laura Minjeaud,Valerie Michotey,Nicole Garcia,Patricia Bonin Aquatic Sciences - Research Across Boundaries, 2009, pp.1-11. ⟨10.1007/s00027-009-0100-8⟩ Article dans une revue istex hal-00412229v1
Formation of pristane from a-tocopherol under simulated anoxic sedimentary conditions : A combination of biotic and abiotic degradative processes Jean-Francois Rontani,Mina Nassiry,Valerie Michotey,Sophie Guasco,Patricia Bonin Geochimica et Cosmochimica Acta, 2009, 74, pp.252-263. ⟨10.1016/j.gca.2009.09.028⟩ Article dans une revue istex hal-00506418v1
Aerobic metabolism of vitamin E by marine bacteria : interaction with free radical oxidation (autoxidation) processes Jean-Francois Rontani,Mina Nassiry,Sophie Guasco,Abdelkrim Mouzdahir,Patricia Bonin Organic Geochemistry, 2008, 39, pp.676-688. ⟨10.1016/J.orggeochem.2008.02.018⟩ Article dans une revue istex hal-00305421v1
Nitrogen fluxes from marine sediments : quantification of the associated co-occurring bacterial processes Laura Minjeaud,Patricia Bonin,Valerie Michotey Biogeochemistry, 2008, 90, pp.141-157. ⟨10.1007/s10533-008-9241-4⟩ Article dans une revue istex hal-00362536v1
Degradation of alkenones by aerobic heterotrophic bacteria : Selective or not ? Jean-Francois Rontani,Ranjita Harji,Sophie Guasco,F.G. Prahl,John K. Volkmanet al. Organic Geochemistry, 2008, 39, pp.34-51. ⟨10.1016/j.orgageochem.2007.10.003⟩ Article dans une revue hal-00256845v1
Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France) Christelle Desnues,Valerie Michotey,Andrea Wieland,Cui Zhizang,Aude Fourçanset al. Water Research, 2007, 41, pp.3407-3419 Article dans une revue hal-00165666v1
Experimental and field evidence for thiyl radical-induced stereomutation of alkenones and other lipids in sediments and seawater Jean-Francois Rontani,Patricia Bonin,F.G. Prahl,Ian D. Jameson,John K. Volkman Organic Geochemistry, 2006, xxx, pp.1-16 Article dans une revue hal-00092653v1
Nitrogen budget in a microbial mat of Camargue (South of France) Patricia Bonin,Valerie Michotey Marine Ecology Progress Series, 2006, XXX, pp.XX Xx Article dans une revue hal-00087392v1
Molecular, Biochemical, and Physiological Approaches for Understanding the Ecology of Denitrification Christelle Goréguès,Valerie Michotey,Patricia Bonin Microbial ecology, 2005, 49 (2), pp.198-208 Article dans une revue hal-02007308v1
Molecular, Biochemical and Physiological Approaches for Understanding the Ecology of Denitrification Christèle Goregues,Valerie Michotey,Patricia Bonin Microbial ecology, 2005, 49, pp.198-208 Article dans une revue hal-00084748v1
Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats C Goregues,Valerie Michotey,Patricia Bonin Ophelia, 2004, 58, pp.263-270 Article dans une revue hal-00796815v1
Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats Christelle Goréguès,Valerie Michotey,Patricia Bonin Ophelia, 2004, 58 (3), pp.263-270 Article dans une revue hal-02008690v1
The anaerobic hydrocarbon biodegrading bacteria: An overview Patricia Bonin,Valerie Michotey,Cristiana Cravo-Laureau,Agnès Hirschler-Réa Ophelia, 2004, 58 (3), pp.243-254. ⟨10.1080/00785236.2004.10410232⟩ Article dans une revue hal-01631864v1
The influence of nitrate and carbon inputs on the end products of bacterial nitrate dissimilation in marine sediment P. Bonin,P. Omnes,A. Chalamet Toxicological and Environmental Chemistry, 1999, 73 (1-2), pp.67-79. ⟨10.1080/02772249909358848⟩ Article dans une revue hal-02868618v1
Simultaneous occurrence of denitrification and nitrate ammonification in sediments of the French Mediterranean Coast P. Bonin,P. Omnes,Alain Chalamet Hydrobiologia, 1998, 389 (1), pp.169-182. ⟨10.1023/A:1003585115481⟩ Article dans une revue istex hal-02874490v1
Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea Valerie Michotey,Patricia Bonin Marine Ecology Progress Series, 1997, 160, pp.47-56 Article dans une revue hal-00708672v1
Aerobic and anaerobic metabolism of 6,10,14-trimethylpentadecan-2-one by a denitrifying bacterium isolated from marine sediments Jean-Francois Rontani,Mj Gilewicz,Valerie Michotey,Tl Zheng,Patricia Boninet al. Applied and Environmental Microbiology, 1997, 63, pp.636-643 Article dans une revue hal-00706691v1
Hydrocarbon influence on denitrification in bioturbated Mediterranean coastal sediments Franck Gilbert,Georges Stora,Patricia Bonin,Yveline Ledréau,Gilbert Milleet al. Hydrobiologia, 1997, vol. 345, pp. 67-77. ⟨10.1023/A:1002931432250⟩ Article dans une revue istex hal-00823238v1
Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium. Michel J. Gauthier,Bénédicte Lafay,Richard Christen,Luis Fernandez,M. Acquavivaet al. International Journal of Systematic Bacteriology, 1992, 42 (4), pp.568-76 Article dans une revue hal-00412938v1

Communication dans un congrès (4)

Assessment of oil weathering and impact in mangrove ecosystem: PRISME Experiment. Ronan Jézéquel,Karine Duboscq,Léa Sylvi,Emma Michaud,Lise Millera Ferrizet al. International Oil Spill Conference Proceedings 2017, May 2017, Long beach, United States. pp.634-656, ⟨10.7901/2169-3358-2017.1.634⟩ Communication dans un congrès hal-02967246v1
Fate and Impact of Oil in Mangrove Ecosystem PRISME Experiment Ronan Jézéquel,Karine Duboscq,Lea Sylvi,Emma Michaud,Lise Millera Ferrizet al. AMOP Technical Seminar, Environment and Climate Change Canada, Ottawa, ON, 2016., Jun 2016, Halifax, Canada Communication dans un congrès hal-02968524v1
Quantification des activités du cycle de l'azote dans des sédiments soumis à des apports d'eau douce: impact sur l'état d'eutrophisation de l'écosystème Imen Zaghmouri,Patricia Bonin,Valerie Michotey Lagun'R, Mar 2011, Aix en Provence, France. pp.178-182 Communication dans un congrès hal-00808460v1
Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology Thierry Tonon,Patricia Bonin,Sylvain Prigent,Z. Shao,Agnès Groisillieret al. Esil 2012: algal post-genomics, Apr 2012, Roscoff, France Communication dans un congrès hal-00760640v1

Chapitre d'ouvrage (4)

Evolutionary success of prokaryotes Jean-Claude Bertrand,P. Bonin,Bernard Ollivier,Karine Alain,A. Godfroyet al. Bertrand, J.C. (ed.); Normand, P. (ed.); Ollivier, Bernard (ed.); Sime-Ngando, T. (ed.). Prokaryotes and evolution, Springer, pp.131-240, 2018, 978-3-319-99782-7. ⟨10.1007/978-3-319-99784-1_4⟩ Chapitre d'ouvrage hal-02328653v1
Biogeochemical Cycles Jean-Claude Bertrand,Patricia Bonin,Pierre Caumette,Jean-Pierre Gattuso,Gérald Grégoriet al. Jean-Claude Bertrand; Pierre Caumette; Philippe Lebaron; Robert Matheron; Philippe Normand; Télesphore Sime-Ngando. Environmental Microbiology: Fundamentals and Applications, Springer Netherlands, pp.511-617, 2015, 978-94-017-9118-2. ⟨10.1007/978-94-017-9118-2_14⟩ Chapitre d'ouvrage hal-02457918v1
Les cycles biogéochimiques. J.C. Bertrand,P. Bonin,Pierre Caumette,Jean-Pierre Gattuso,Georges Gregorioet al. Ecologie Microbienne : Microbiologie des milieux naturels anthropisés, Presses de l'Université de Pau et des Pays de l'Adour, pp.545-657, 2012, 978-2-35311-022-3 Chapitre d'ouvrage hal-02564992v1
Les cycles géochimiques. Chapitre 14 Jean-Claude Bertrand,Patricia Bonin,Pierre Caumette,Jean-Pierre Gattuso,Gérald Grégoriet al. Ecologie Microbienne : Microbiologie des milieux naturels et anthropisés, Presses Universitaires de Pau et des Pays de l'Adour, 1004 p., 2011, 2-35311-022-3 9782353110223 Chapitre d'ouvrage hal-02811238v1

Pré-publication, Document de travail (2)

Singlet oxygen-induced alteration of bacteria associated with phytodetritus: effect of bacterial pigments Gwénola Simon,Laurie Casalot,Corinne Valette,Christopher Burot,Jean-François Rontaniet al. 2023 Pré-publication, Document de travail hal-04286634v1
Electrotrophy as potential primary metabolism for colonization of conductive surfaces in deep-sea hydrothermal chimneys Guillaume Pillot,Sylvain Davidson,Laetitia Shintu,Oulfat Amin,Anne Godfroyet al. 2020 Pré-publication, Document de travail hal-03022667v1

Rapport (1)

Prospective Surfaces et Interfaces Continentales : 2024-2028 Sophie Ayrault,Gilles Pinay,Eric Ferrage,Nizar Abcha,Philippe Ackereret al. INSU, CNRS; INEE, CNRS. 2024, 147 p Rapport (rapport d’expertise collective) insu-05045026v1

Thèse (1)

Etude du métabolisme du mannitol chez l'algue brune modèle Ectocarpus siliculosus : caractérisation de l'enzyme clé mannitol-1-phosphate déshydrogénase. Patricia Bonin Biochimie, Biologie Moléculaire. Université Pierre et Marie Curie - Paris VI, 2014. Français. ⟨NNT : 2014PA066618⟩ Thèse tel-01147231v1