Perrine Paul-Gilloteaux

Identifiants chercheurs

IdHAL :

perrine-paul-gilloteaux

ORCID :

0000-0002-4822-165X

IdRef :

236865714

arXiv :

paulgilloteaux_p_1

ResearcherID :

http://www.researcherid.com/rid/L-8287-2018

Présentation

Publications

Article dans une revue (72)

MIFA: Metadata, Incentives, Formats and Accessibility guidelines to improve the reuse of AI datasets for bioimage analysis Teresa Zulueta-Coarasa,Florian Jug,Aastha Mathur,Josh Moore,Arrate Muñoz-Barrutiaet al. Nature Methods, 2025, Online ahead of print. ⟨10.1038/s41592-025-02835-8⟩ Article dans une revue hal-05307369v1
F-BIAS: Towards a distributed national core facility for bioimage analysis Mélodie Ambroset,Marie Anselmet,Clément Benedetti,Arthur Meslin,Aurélien Maillotet al. PLoS Computational Biology, 2025, 21 (6), pp.e1013058. ⟨10.1371/journal.pcbi.1013058⟩ Article dans une revue hal-05165608v1
Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges Lasse Hansen,Wiebke Heyer,Christoph Großbröhmer,Frederic Madesta,Thilo Sentkeret al. Journal of Machine Learning for Biomedical Imaging, 2025, 3 (December 2025), pp.775-791. ⟨10.59275/j.melba.2025-gc8c⟩ Article dans une revue hal-05447071v1
Single cell profiling of circulating autoreactive CD4 T cells from patients with autoimmune liver diseases suggests tissue imprinting Anaïs Cardon,Thomas Guinebretière,Chuang Dong,Laurine Gil,Sakina Adoet al. Nature Communications, 2025, 16 (1), pp.1161. ⟨10.1038/s41467-025-56363-2⟩ Article dans une revue hal-04926864v1
Multiplexing for a better understanding of the tissue environment: presentation of some methods Stéphanie Blandin,Aurélie Domene,Philippe Hulin,Aurélie Joussaume,Steven Nedellecet al. Revue Française d'Histotechnologie, 2025, 37 (1), pp.65-93. ⟨10.25830/afh.rfh.2025.37.1.65⟩ Article dans une revue hal-05219781v1
The bacterial type three secretion system induces mechanoporation of vacuolar membranes Léa Swistak,Marvin Albert,Camila Valenzuela,Elif Begüm Gökerküçük,Matthijn Voset al. PLoS Biology, 2025, 23 (5), pp.e3003135. ⟨10.1371/journal.pbio.3003135⟩ Article dans une revue hal-05056483v1
The crucial role of bioimage analysts in scientific research and publication Beth Cimini,Peter Bankhead,Rocco d'Antuono,Elnaz Fazeli,Julia Fernandez-Rodriguezet al. Journal of Cell Science, 2024, 137 (20), ⟨10.1242/jcs.262322⟩ Article dans une revue hal-04765111v1
Deep Learning‐Based Blood Abnormalities Detection as a Tool for VEXAS Syndrome Screening Cédric de Almeida Braga,Maxence Bauvais,Pierre Sujobert,Maël Heiblig,Maxime Jullienet al. International Journal of Laboratory Hematology, 2024, ⟨10.1111/ijlh.14368⟩ Article dans une revue hal-04778186v1
Correlated multimodal imaging in life sciences: lessons learnt Pavitra Sokke Rudraiah,Rafael Camacho,Julia Fernandez-Rodriguez,Dror Fixler,Jan Grimmet al. Frontiers in Biomaterials Science, 2024, 3, pp.1338115. ⟨10.3389/fbiom.2024.1338115⟩ Article dans une revue (article de synthèse) hal-05080566v1
Bioimage informatics: Investing in software usability is essential Perrine Paul-Gilloteaux PLoS Biology, 2023, 21 (7), pp.e3002213. ⟨10.1371/journal.pbio.3002213⟩ Article dans une revue hal-04175990v1
Visualizing enteric nervous system activity through dye-free dynamic full-field optical coherence tomography Tony Durand,Perrine Paul-Gilloteaux,Michalina Gora,Lara Laboudie,Emmanuel Coronet al. Communications Biology, 2023, 6 (1), pp.236. ⟨10.1038/s42003-023-04593-9⟩ Article dans une revue hal-04013867v1
Deep Learning Based Blood Abnormalities Detection As a Tool for Vexas Syndrome Screening Cedric de Almeida Braga,Maxence Bauvais,Pierre Sujobert,Mael Heiblig,Maxime Jullienet al. Blood, 2023, 142 (Supplement 1), pp.3648-3648. ⟨10.1182/blood-2023-186874⟩ Article dans une revue hal-04456433v1
Multimodality imaging and transcriptomics to phenotype mitral valve dystrophy in a unique knock-in Filamin-A rat model Constance Delwarde,Claire Toquet,Pascal Aumond,Amir Hossein Kayvanjoo,Adrien Foucalet al. Cardiovascular Research, 2023, 119 (3), pp.759-771. ⟨10.1093/cvr/cvac136⟩ Article dans une revue hal-03765601v1
Sample preparation and image registration for correlative cryo-FM and cryo-FIB-SEM of plunge-frozen mammalian cells Nadav Scher,Katya Rechav,Perrine Paul-Gilloteaux,Ori Avinoam STAR Protocols, 2022, 3 (1), pp.101142. ⟨10.1016/j.xpro.2022.101142⟩ Article dans une revue hal-03745072v1
A time-lapse embryo dataset for morphokinetic parameter prediction Tristan Gomez,Magalie Feyeux,Justine Boulant,Nicolas Normand,Laurent Davidet al. Data in Brief, 2022, pp.108258. ⟨10.1016/j.dib.2022.108258⟩ Article dans une revue hal-03667158v1
A flexible open-source processing workflow for multiplexed fluorescence imaging based on cycles Guillaume Potier,Aurélie Doméné,Perrine Paul-Gilloteaux F1000Research, 2022, 11, pp.1121. ⟨10.12688/f1000research.124990.1⟩ Article dans une revue hal-03791824v1
Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists Gabriel Martins,Fabrice Cordelières,Julien Colombelli,Rocco D’antuono,Ofra Golaniet al. F1000Research, 2021, 10, pp.334. ⟨10.12688/f1000research.25485.1⟩ Article dans une revue hal-03214896v1
QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy Glyn Nelson,Ulrike Boehm,Steve Bagley,Peter Bajcsy,Johanna Bischofet al. Journal of Microscopy, 2021, 284 (1), pp.56-73. ⟨10.1111/jmi.13041⟩ Article dans une revue hal-03745112v1
Bioimage analysis workflows: community resources to navigate through a complex ecosystem Perrine Paul-Gilloteaux,Sébastien Tosi,Jean-Karim Hériché,Alban Gaignard,Hervé Ménageret al. F1000Research, 2021, 10, pp.320. ⟨10.12688/f1000research.52569.1⟩ Article dans une revue hal-03208600v1
In situ fiducial markers for 3D correlative cryo-fluorescence and FIB-SEM imaging Nadav Scher,Katya Rechav,Perrine Paul-Gilloteaux,Ori Avinoam iScience, 2021, 24 (7), pp.102714. ⟨10.1016/j.isci.2021.102714⟩ Article dans une revue hal-03278159v1
An LDV based method to quantify the error of PC-MRI derived Wall Shear Stress measurement Marco Castagna,Sébastien Levilly,Perrine Paul-Gilloteaux,Saïd Moussaoui,Jean-Marc Roussetet al. Scientific Reports, 2021, 11 (1), pp.4112. ⟨10.1038/s41598-021-83633-y⟩ Article dans une revue hal-03149044v1
Protocol for image registration of correlative soft X-ray tomography and super-resolution structured illumination microscopy images Nina Vyas,Stephan Kunne,Thomas Fish,Ian Dobbie,Maria Harkiolakiet al. STAR Protocols, 2021, 2 (2), pp.100529. ⟨10.1016/j.xpro.2021.100529⟩ Article dans une revue hal-03223460v1
REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology Ugis Sarkans,Wah Chiu,Lucy Collinson,Michele Darrow,Jan Ellenberget al. Nature Methods, 2021, ⟨10.1038/s41592-021-01166-8⟩ Article dans une revue hal-03232628v1
The NEUBIAS Gateway: a hub for bioimage analysis methods and materials Beth Cimini,Simon Nørrelykke,Marion Louveaux,Nataša Sladoje,Perrine Paul-Gilloteauxet al. F1000Research, 2020, 9, pp.613. ⟨10.12688/f1000research.24759.1⟩ Article dans une revue hal-02903660v1
Correlated Multimodal Imaging in Life Sciences: Expanding the Biomedical Horizon Andreas Walter,Perrine Paul-Gilloteaux,Birgit Plochberger,Ludek Sefc,Paul Verkadeet al. Frontiers in Physics, 2020, 8, ⟨10.3389/fphy.2020.00047⟩ Article dans une revue hal-02539357v1
Towards Quantitative Evaluation of Wall Shear Stress from 4D Flow Imaging Sébastien Levilly,Marco Castagna,Jérôme Idier,Félicien Bonnefoy,David Le Touzéet al. Magnetic Resonance Imaging, 2020, ⟨10.1016/j.mri.2020.08.017⟩ Article dans une revue hal-02564861v1
Kinetics of Plasmodium midgut invasion in Anopheles mosquitoes Gloria Volohonsky,Perrine Paul-Gilloteaux,Jitka Štáfková,Julien Soichot,Jean Salameroet al. PLoS Pathogens, 2020, 16 (9), ⟨10.1371/journal.ppat.1008739⟩ Article dans une revue hal-03093938v1
Imagerie tri-dimensionnelle d’échantillons par une technique de serial block face imaging amovible Marine Malloci,Stéphanie Blandin,Philippe Hulin,Paul Dorval,Steven Nedellecet al. Revue Française d'Histotechnologie, 2020, 32 (1), pp.187-197. ⟨10.25830/afh.rfh.2020.32.187.197⟩ Article dans une revue hal-03196150v1
Development of automated annotation software for human embryo morphokinetics M. Feyeux,Arnaud Reignier,M. Mocaer,Jenna Lammers,Dimitri Meistermannet al. Human Reproduction, 2020, 35 (3), pp.557-564. ⟨10.1093/humrep/deaa001⟩ Article dans une revue hal-02509917v1
BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows Ulysse Rubens,Romain Mormont,Lassi Paavolainen,Volker Bäcker,Benjamin Pavieet al. Patterns, 2020, 1, pp.100040. ⟨10.1016/j.patter.2020.100040⟩ Article dans une revue hal-02799349v1
3D Correlative Cryo-Structured Illumination Fluorescence and Soft X-ray Microscopy Elucidates Reovirus Intracellular Release Pathway Ilias Kounatidis,Megan Stanifer,Michael Phillips,Perrine Paul-Gilloteaux,Xavier Heiligensteinet al. Cell, 2020, ⟨10.1016/j.cell.2020.05.051⟩ Article dans une revue hal-02886173v1
In-vitro validation of 4D flow MRI measurements with an experimental pulsatile flow model A. David,D. Le Touzé,Thierry Le Tourneau,P. Paul-Gilloteaux,F. Bonnefoyet al. Diagnostic and Interventional Imaging, 2019, 100 (1), pp.17-23. ⟨10.1016/j.diii.2018.08.012⟩ Article dans une revue hal-02267542v1
Automatic Registration of Correlative Microscopies with Error Assessment and Applications for the Optimization of Multimodal Acquisitions. Guillaume Potier,Romain Capoulade,Jean Merot,Frédéric Lavancier,Xavier Heiligensteinet al. Microscopy and Microanalysis, 2019, 25 (S2), pp.1020-1021. ⟨10.1017/S143192761900583X⟩ Article dans une revue hal-02267554v1
eC-CLEM: A multidimension, multimodel software to correlate intermodal images with a focus on light and electron microscopy. Xavier Heiligenstein,Perrine Paul-Gilloteaux,Graça Raposo,Jean Salamero Methods in Cell Biology, 2018, pp.335-352. ⟨10.1016/bs.mcb.2017.03.014⟩ Article dans une revue hal-01712180v1
EP-1998: In silico modelling of the impact of the fractionation for hypofractionated prostate treatments G. Delpon,J. N'Guessan,Perrine Paul-Gilloteaux,K. Clément-Colmou,V. Potironet al. Radiotherapy & Oncology, 2018, 127 (S2), pp.S1086-S1087. ⟨10.1016/S0167-8140(18)32307-7⟩ Article dans une revue hal-02736053v1
Human Motor Thalamus Reconstructed in 3D from Continuous Sagittal Sections with Identified Subcortical Afferent Territories Igor Ilinsky,Andreas Horn,Perrine Paul-Gilloteaux,Pierre Gressens,Catherine Verneyet al. eNeuro, 2018, 5 (3), pp.ENEURO.0060-18.2018. ⟨10.1523/ENEURO.0060-18.2018⟩ Article dans une revue hal-02267562v1
LINC complex-Lis1 interplay controls MT1-MMP matrix digest-on-demand response for confined tumor cell migration Elvira Infante,Alessia Castagnino,Robin Ferrari,Pedro Monteiro,Sonia Agüera-Gonzálezet al. Nature Communications, 2018, 9 (1), ⟨10.1038/s41467-018-04865-7⟩ Article dans une revue hal-02267545v1
Optimizing radiotherapy protocols using computer automata to model tumour cell death as a function of oxygen diffusion processes Perrine Paul-Gilloteaux,Vincent Potiron,Grégory Delpon,Stéphane Supiot,Sophie Chiavassaet al. Scientific Reports, 2017, 7 (1), pp.2280. ⟨10.1038/s41598-017-01757-6⟩ Article dans une revue inserm-01550008v1
eC-CLEM: Flexible Multidimensional Registration Software for Correlative Microscopies with Refined Accuracy Mapping Xavier Heiligenstein,Perrine Paul-Gilloteaux,Martin Belle,Graca Raposo,Jean Salamero Microscopy and Microanalysis, 2017, 23 (S1), pp.360-361. ⟨10.1017/S1431927617002483⟩ Article dans une revue hal-02735782v1
L. fermentum CECT 5716 prevents stress-induced intestinal barrier dysfunction in newborn rats T. Vanhaecke,P. Aubert,P. Grohard,Thierry Durand,P. Hulinet al. Neurogastroenterology & Motility, 2017, 29 (8), pp.e13069. ⟨10.1111/nmo.13069⟩ Article dans une revue hal-01712194v1
eC-CLEM: flexible multidimensional registration software for correlative microscopies Perrine Paul-Gilloteaux,Xavier Heiligenstein,Martin Belle,Marie-Charlotte Domart,Banafshe Larijaniet al. Nature Methods, 2017, 14 (2), pp.102 - 103. ⟨10.1038/nmeth.4170⟩ Article dans une revue hal-01712184v1
Endothelin-3 stimulates cell adhesion and cooperates with β1-integrins during enteric nervous system ontogenesis Elodie Gazquez,Yuli Watanabe,Florence Broders-Bondon,Perrine Paul-Gilloteaux,Julie Heyschet al. Scientific Reports, 2016, 6, pp.37877. ⟨10.1038/srep37877⟩ Article dans une revue hal-01426076v1
Control of the collective migration of enteric neural crest cells by the Complement anaphylatoxin C3a and N-cadherin Florence Broders-Bondon,Perrine Paul-Gilloteaux,Elodie Gazquez,Julie Heysch,Matthieu Pielet al. Developmental Biology, 2016, 414 (1), pp.85 - 99. ⟨10.1016/j.ydbio.2016.03.022⟩ Article dans une revue hal-01712198v1
Direct interaction between exocyst and Wave complexes promotes cell protrusions and motility. Marco Biondini,Amel Sadou-Dubourgnoux,Perrine Paul-Gilloteaux,Giulia Zago,Melis D Arslanhanet al. Journal of Cell Science, 2016, 129 (20), pp.3756-3769. ⟨10.1242/jcs.187336⟩ Article dans une revue hal-01452011v1
Control of the collective migration of enteric neural crest cells by the Complement anaphylatoxin C3a and N-cadherin Florence Bondon Bondon Broders,Florence Broders-Bondon,Perrine Paul-Gilloteaux,Elodie Gazquez,Julie Heyschet al. Developmental Biology, 2016, 414 (1), pp.85-99. ⟨10.1016/j.ydbio.2016.03.022⟩ Article dans une revue hal-03043888v1
Endothelin-3 stimulates cell adhesion and cooperates with β1-integrins during enteric nervous system ontogenesis Florence Bondon Bondon Broders,Elodie Gazquez,Yuli Watanabe,Florence Broders-Bondon,Perrine Paul-Gilloteauxet al. Scientific Reports, 2016, 6 (1), ⟨10.1038/srep37877⟩ Article dans une revue hal-03043883v1
Quantitative analysis of flagellar proteins in Drosophila sperm tails. Teresa Mendes Maia,Perrine Paul-Gilloteaux,Renata Basto Methods in Cell Biology, 2015, pp.263-78. ⟨10.1016/bs.mcb.2015.01.003⟩ Article dans une revue hal-01712207v1
Myosin 1b functions as an effector of EphB signaling to control cell repulsion Marie-Thérèse Prospéri,Priscilla Lépine,Florent Dingli,Perrine Paul-Gilloteaux,René Martinet al. Journal of Cell Biology, 2015, 210 (2), pp.347 - 361. ⟨10.1083/jcb.201501018⟩ Article dans une revue hal-01712201v1
The CryoCapsule: Simplifying Correlative Light to Electron Microscopy Xavier Heiligenstein,Jérôme Heiligenstein,Cédric Delevoye,Ilse Hurbain,Sabine Bardinet al. Traffic, 2014, 15 (6), pp.700 - 716. ⟨10.1111/tra.12164⟩ Article dans une revue hal-01712232v1
Control of MT1-MMP transport by atypical PKC during breast-cancer progression Carine Rossé,Catalina Lodillinsky,Laetitia Fuhrmann,Maya Nourieh,Pedro Monteiroet al. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (18), pp.E1872 - E1879. ⟨10.1073/pnas.1400749111⟩ Article dans une revue hal-01712228v1
Objective comparison of particle tracking methods Nicolas Chenouard,Ihor Smal,Fabrice de Chaumont,Martin Maska,Ivo F. Sbalzariniet al. Nature Methods, 2014, 11 (3), pp.281-289. ⟨10.1038/nmeth.2808⟩ Article dans une revue hal-00932869v1
Septin6 and Septin7 GTP Binding Proteins Regulate AP-3- and ESCRT-Dependent Multivesicular Body Biogenesis Sofia Traikov,Christoph Stange,Thomas Wassmer,Perrine Paul-Gilloteaux,Jean Salameroet al. PLoS ONE, 2014, 9 (11), pp.e109372. ⟨10.1371/journal.pone.0109372⟩ Article dans une revue hal-01712221v1
Concomitant Notch activation and p53 deletion trigger epithelial-to-mesenchymal transition and metastasis in mouse gut Maia Chanrion,Inna Kuperstein,Cédric Barrière,Fatima El Marjou,David Cohenet al. Nature Communications, 2014, 5 (1), pp.5005. ⟨10.1038/ncomms6005⟩ Article dans une revue hal-01712223v1
Fast high-resolution 3D total internal reflection fluorescence microscopy by incidence angle scanning and azimuthal averaging. Jérôme Boulanger,Charles Gueudry,Daniel Münch,Bertrand Cinquin,Perrine Paul-Gilloteauxet al. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (48), pp.17164-9 Article dans une revue hal-01133826v1
Recycling Endosome Tubule Morphogenesis from Sorting Endosomes Requires the Kinesin Motor KIF13A Cédric Delevoye,Stephanie Miserey-Lenkei,Guillaume Montagnac,Floriane Gilles-Marsens,Perrine Paul-Gilloteauxet al. Cell Reports, 2014, 6 (3), pp.445-454. ⟨10.1016/j.celrep.2014.01.002⟩ Article dans une revue hal-02735329v1
Centrosome amplification causes microcephaly Véronique Marthiens,Maria Rujano,Carole Pennetier,Sarah Tessier,Perrine Paul-Gilloteauxet al. Nature Cell Biology, 2013, 15 (7), pp.731-740. ⟨10.1038/ncb2746⟩ Article dans une revue hal-03453019v1
Endosomal WASH and exocyst complexes control exocytosis of MT1-MMP at invadopodia Pedro Monteiro,Carine Rossé,Antonio Castro-Castro,Marie Irondelle,Emilie Lagoutteet al. Journal of Cell Biology, 2013, 203 (6), pp.1063 - 1079. ⟨10.1083/jcb.201306162⟩ Article dans une revue hal-01712237v1
Sox10 and Itgb1 interaction in enteric neural crest cell migration Yuli Watanabe,Florence Broders-Bondon,Viviane Baral,Perrine Paul-Gilloteaux,Veronique Pingaultet al. Developmental Biology, 2013, 379 (1), pp.92 - 106. ⟨10.1016/j.ydbio.2013.04.013⟩ Article dans une revue hal-01712242v1
The first World Cell Race (vol 22, pg R673, 2012) Paolo Maiuri,Emmanuel Terriac,Perrine Paul-Gilloteaux,Timothee Vignaud,Krista Mcnallyet al. Current Biology, 2013, 23 (1), pp.97. ⟨10.1016/j.cub.2012.12.015⟩ Article dans une revue hal-03304887v1
Centrosome amplification causes microcephaly Véronique Marthiens,Maria Rujano,Carole Pennetier,Sarah Tessier,Perrine Paul-Gilloteauxet al. Nature Cell Biology, 2013, 15 (7), pp.731 - 740. ⟨10.1038/ncb2746⟩ Article dans une revue hal-01712239v1
Sox10 and Itgb1 interaction in enteric neural crest cell migration Florence Bondon Bondon Broders,Yuli Watanabe,Florence Broders-Bondon,Viviane Baral,Perrine Paul-Gilloteauxet al. Developmental Biology, 2013, 379 (1), pp.92-106. ⟨10.1016/j.ydbio.2013.04.013⟩ Article dans une revue hal-03043892v1
ATAT1/MEC-17 acetyltransferase and HDAC6 deacetylase control a balance of acetylation of alpha-tubulin and cortactin and regulate MT1-MMP trafficking and breast tumor cell invasion Antonio Castro-Castro,Carsten Janke,Guillaume Montagnac,Perrine Paul-Gilloteaux,Philippe Chavrier European Journal of Cell Biology, 2012, 91 (11-12), pp.950 - 960. ⟨10.1016/j.ejcb.2012.07.001⟩ Article dans une revue istex hal-01712252v1
N-cadherin and β1-integrins cooperate during the development of the enteric nervous system Florence Broders-Bondon,Perrine Paul-Gilloteaux,Camille Carlier,Glenn Radice,Sylvie Dufour Developmental Biology, 2012, 364 (2), pp.178 - 191. ⟨10.1016/j.ydbio.2012.02.001⟩ Article dans une revue hal-01712255v1
N-cadherin and β1-integrins cooperate during the development of the enteric nervous system Florence Bondon Bondon Broders,Florence Broders-Bondon,Perrine Paul-Gilloteaux,Camille Carlier,Glenn Radiceet al. Developmental Biology, 2012, 364 (2), pp.178-191. ⟨10.1016/j.ydbio.2012.02.001⟩ Article dans une revue hal-03043897v1
The first World Cell Race. Paolo Maiuri,Emmanuel Terriac,Perrine Paul-Gilloteaux,Timothée Vignaud,Krista Mcnallyet al. Current Biology, 2012, 22 (17), pp.R673-5. ⟨10.1016/j.cub.2012.07.052⟩ Article dans une revue hal-00744751v1
Software for drift compensation, particle tracking and particle analysis of high-speed atomic force microscopy image series † Mohamed Husain,Thomas Boudier,Perrine Paul-Gilloteaux,Ignacio Casuso,Simon Scheuring Journal of Molecular Recognition, 2012, 25 ((5)), pp.292-8. ⟨10.1002/jmr.2187⟩ Article dans une revue istex inserm-01363229v1
Complete Lateral and Angular Diffusion and Protein-Protein Interaction Description of a Membrane Protein Ignacio Casuso,Jean-Pierre Duneau,Mohamed Chami,Perrine Paul-Gilloteaux,Mohamed Husainet al. Biophysical Journal, 2012, 102 (3), pp.413a-414a. ⟨10.1016/j.bpj.2011.11.2261⟩ Article dans une revue hal-02735811v1
Characterization of the motion of membrane proteins using high-speed atomic force microscopy Ignacio Casuso,Jonathan Khao,Mohamed Chami,Perrine Paul-Gilloteaux,Mohamed Husainet al. Nature Nanotechnology, 2012, 7, pp.525-529. ⟨10.1038/nnano.2012.109⟩ Article dans une revue inserm-01363192v1
Automatic noise quantification for confocal fluorescence microscopy images Perrine Paul,Heiko Duessmann,Tytus Bernas,Heinrich Huber,Dimitrios Kalamatianos Computerized Medical Imaging and Graphics, 2010, 34 (6), pp.426-434. ⟨10.1016/j.compmedimag.2010.04.001⟩ Article dans une revue istex hal-02735528v1
A surface registration method for quantification of intraoperative brain deformations in image-guided neurosurgery. Perrine Paul,Xavier Morandi,Pierre Jannin IEEE Transactions on Information Technology in Biomedicine, 2009, 13 (6), pp.976-83. ⟨10.1109/TITB.2009.2025373⟩ Article dans une revue inserm-00546498v1
ALISSA: an automated live-cell imaging system for signal transduction analyses Jakub Wenus,Heiko Dussmann,Perrine Paul,Dimitrios Kalamatianos,Markus Rehmet al. Biotechniques, 2009, 47 (6), pp.1033-1040. ⟨10.2144/000113247⟩ Article dans une revue hal-02735355v1
Augmented virtuality based on stereoscopic reconstruction in multimodal image-guided neurosurgery: methods and performance evaluation. Perrine Paul,Oliver J. Fleig,Pierre Jannin IEEE Transactions on Medical Imaging, 2005, 24 (11), pp.1500-11. ⟨10.1109/TMI.2005.857029⟩ Article dans une revue inserm-00136469v1

Communication dans un congrès (67)

FBI DATA : une gestion FAIR et libre des données de bio-imagerie Théo Barnouin,Emmanuel Faure,Perrine Gilloteaux,Jean-François Guillaume,Marc Mongyet al. JRES 2024 - Journées réseaux de l'enseignement et de la recherche, Renater, Dec 2024, Rennes, France Communication dans un congrès hal-04893882v1
How to describe bioimage data? Toward a community consensus, or how to create a metadata standard Perrine Paul-Gilloteaux Journée "Cycle de vie / Gestion des données de la biologie", Frédéric Brau, Apr 2024, Sophia Antipolis, France Communication dans un congrès hal-04555129v1
Image analysis tools and applications for correlative microscopy Perrine Paul-Gilloteaux Séminaire de l'Institut de Génétique & Développement de Rennes, Apr 2023, Rennes, France Communication dans un congrès hal-04217158v1
Development of correlation software for Correlative cryo light Soft X-Ray Tomography : example of 3d correlative cryo-structured illumination fluorescence and soft x-ray microscopy to ellucidate reovirus intracellular release pathway Perrine Paul-Gilloteaux INSTRUCT Soft X-ray Tomography workshop, Sep 2023, Didcot, United Kingdom Communication dans un congrès hal-04217085v1
Correlative microscopies : comulisglobe and news from ec-clem Perrine Paul-Gilloteaux France BioImaging CLEM day: What's new in multimodal imaging, Mar 2023, Paris, France Communication dans un congrès hal-04217188v1
Linking and analyzing correlative datasets Perrine Paul-Gilloteaux ALL-HANDS NODES MEETINg&MORE, iNext DISCOVERY, Apr 2023, Heidelberg, Germany Communication dans un congrès hal-04217201v1
France Bio Imaging : setting up image data management solutions at the national level Perrine Paul-Gilloteaux BioImaging and the European Open Science Cloud, EOSC-Life, Apr 2023, Heidelberg, Germany Communication dans un congrès hal-04217222v1
Correlative microscopies : image registration for clem and for deep learning What can bring error estimation ? Perrine Paul-Gilloteaux Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale, Instituts 3IA MIAI, 3IA Cote d'Azur et PRAIRIE, Mar 2023, Paris, France Communication dans un congrès hal-04217245v1
Image processing and analysis in clem : methods and pitfalls Perrine Paul-Gilloteaux Symposium on recent developments in cellular electron microscopy, AVIESAN ITMO MOLECULAR AND STRUCTURAL BASIS OF LIFE SCIENCES, Mar 2022, Paris, France Communication dans un congrès hal-04217262v1
La tomographie par cohérence optique plein champ : un nouvel outil de microscopie optique dynamique pour l'analyse du système nerveux entérique T Durand,L Laboudie,Perrine Paul-Gilloteaux,Isabelle Neveu,Philippe Naveilhanet al. JFHOD, Mar 2022, Paris, France Communication dans un congrès hal-03548856v1
Correlative microscopies: image registration for CLEM and for Deep Learning Perrine Paul-Gilloteaux Crick BioImage Analysis Symposium (CBIAS), Nov 2022, Londres (London), United Kingdom Communication dans un congrès hal-04217278v1
A FULL 3D CORRELATIVE IMAGING WORKFLOW: CHALLENGES IN COMPUTER VISION Perrine Paul-Gilloteaux,Nina Vyas,Guillaume Potier,Stephan Kunne,Thomas M Fishet al. IEEE ISBI 2021 (VIRTUAL)., Apr 2021, Nice, France Communication dans un congrès hal-03258718v1
A Registration Error Estimation Framework for Correlative Imaging Guillaume Potier,Frederic Lavancier,Stephan Kunne,Perrine Paul-Gilloteaux 2021 IEEE International Conference on Image Processing (ICIP), Sep 2021, Anchorage, United States. pp.131-135, ⟨10.1109/ICIP42928.2021.9506474⟩ Communication dans un congrès hal-03327500v1
EcClemv2: A new version of a flexible software for correlative workflows Perrine Paul-Gilloteaux,Guillaume Potier,Frédéric Lavancier COMULIS Conference, Sep 2021, Gothenburg, Sweden Communication dans un congrès hal-04219791v1
High resolution correlative 3D imaging of the intracellular world under physiological conditions using the synergies of laser light and X-ray microscopes at cryogenic temperatures Chidinma Okolo,Ilias Kounatidis,Perrine Paul-Gilloteaux,Ian Dobbie,Maria Harkiolaki Microscience Microscopy Congress 2021 incorporating EMAG 2021, Jul 2021, Oxford, United Kingdom. ⟨10.22443/rms.mmc2021.71⟩ Communication dans un congrès hal-04219754v1
Méthodes et écueils du traitement des images issues de microscopie corrélative Perrine Paul-Gilloteaux 6eme rencontre des microscopistes clermontois, Igred et Inrae, Oct 2021, Clermont-Ferrand, France Communication dans un congrès hal-04214182v1
Correlative microscopies: quantitatively fusing information from 3D+ to 6D+ images Perrine Paul-Gilloteaux Microscience Microscopy Congress 2021 incorporating EMAG 2021, Jul 2021, Oxford, United Kingdom. ⟨10.22443/rms.mmc2021.69⟩ Communication dans un congrès hal-04219749v1
Le dorica castra des images Perrine Paul-Gilloteaux,Laurence Dubreil Nuit Blanche des Chercheurs, Feb 2020, Nantes, France Communication dans un congrès hal-02509532v1
Cross-modal registration using point clouds and graph-matching in the context of correlative microscopies Stephan Kunne,Guillaume Potier,Jean Merot,Perrine Paul-Gilloteaux iTWIST : international Traveling Workshop on Interactions between low-complexity data models and Sensing Techniques, Dec 2020, Nantes, France Communication dans un congrès hal-03039114v1
Quantification: extracting quantitative information from correlated multimodal dataset Perrine Paul-Gilloteaux IMAGE PROCESSING FOR CORRELATED AND MULTIMODAL IMAGING TECHNIQUES, VIB Training, Oct 2020, Ghent, Belgium Communication dans un congrès hal-04214173v1
Leveraging Molecular and Cellular Fiducial Markers for Correlative Bio-Imaging Chidinma Okolo,Ilias Kounatidis,Thomas Fish,Perrine Paul-Gilloteaux,Ian Dobbieet al. Quantitative BioImaging, Jan 2020, Oxford, United Kingdom Communication dans un congrès hal-04219534v1
French gastronomy and bio image analysis workflows Perrine Paul-Gilloteaux Virtual Analytical and Quantitative Microscopy, May 2020, Woods Hole, United States Communication dans un congrès hal-02736886v1
Introduction to Correlation Software in CLEM Perrine Paul-Gilloteaux Correlated Multimodal Imaging Conference, Nov 2019, Vienne, Austria Communication dans un congrès hal-02744299v1
NEUBIAS: BIOIMAGE ANALYSTS NETWORK TO SUPPORT LIFE SCIENTISTS THROUGH TRAINING, ONLINE TOOLS REPOSITORIES AND BENCHMARKING DEPLOYMENT FOR BIOIMAGE ANALYSIS WORKFLOWS Kota Miura,Sebastian Munck,Florian Levet,Gabriel Martins,Fabrice Cordelièreset al. Focus on Microscopy, Apr 2019, Londres, United Kingdom Communication dans un congrès hal-02746229v1
An in Vitro and in Silico Validation Study for PC MRI and Derived Bio‐markers Marco Castagna,Sébastien Levilly,Perrine Paul-Gilloteaux,Félicien Bonnefoy,Jérôme Idieret al. 31st Society for Magnetic Resonance Angiography conference (SMRA 2019), Aug 2019, Nantes, France Communication dans un congrès hal-03130185v1
Interdisciplinarity in a (still short) carreer: living and contributing to the creation of a new research field in biomedical image informatics. Perrine Paul-Gilloteaux Opening conference of Angers Summer schools, Jun 2019, Angers, France Communication dans un congrès hal-02745462v1
Les bases de données images: limitations et aspirations Perrine Paul-Gilloteaux Journée partenaire industriel GDR IMABIO, Jun 2019, Paris, France Communication dans un congrès hal-02745126v1
Introduction to transformations and registrations Perrine Paul-Gilloteaux,Martin Schorb High-Accuracy CLEM: Applications at Room Temperature and in cryo, Apr 2019, Heidelberg, Germany Communication dans un congrès hal-02746707v1
Advanced Image analysis Perrine Paul-Gilloteaux Analytical & Quantitative Light Microscopy, May 2019, Woods Hole, United States Communication dans un congrès hal-02736802v1
RECALAGE EN MICROSCOPIES CORRÉLATIVES POUR LA CARACTÉRISATION PHYSIOPATHOLOGIQUE DE LA VALVULOPATHIE Perrine Paul-Gilloteaux 16eme colloque de la société Française des Microscopies, Jul 2019, Poitiers, France Communication dans un congrès hal-02745967v1
Automatic Registration of Correlative Microscopies with Error Assessment and Applications for the Optimization of Multimodal Acquisitions Perrine Paul-Gilloteaux SCANDEM 2019, Jun 2019, Gothenburg, Sweden Communication dans un congrès hal-02736339v1
Linking cell scales: methods and software for correlative imaging workflows Perrine Paul-Gilloteaux La microscopie électronique pour les sciences du vivant. Journées Scientifiques de l'Université de Nantes, Jun 2019, Nantes, France Communication dans un congrès hal-02745260v1
Bio-Imagerie: mathématiques et informatique pour la compréhension du vivant Perrine Paul-Gilloteaux Immersion Science, Mar 2018, Ile Tudy, France Communication dans un congrès hal-02736939v1
Automatic registration for multidimensional correlative microscopies with error assessment and detections of deformations Perrine Paul-Gilloteaux International Microscopy Congress, Sep 2018, Sydney, Australia Communication dans un congrès hal-02736564v1
Computer vision methods for multidimensional correlative microscopies: optimizing acquisitions using maths Perrine Paul-Gilloteaux Colloqium: Future Microscopy and Analysis, Nov 2018, Ghent, Belgium Communication dans un congrès hal-02736454v1
Constructing workflows in Bio Image Analysis Perrine Paul-Gilloteaux Analytical & Quantitative Light Microscopy, May 2018, Woods Hole, United States Communication dans un congrès hal-02736843v1
Computer vision methods for multidimensional correlative microscopies Perrine Paul-Gilloteaux Journées communes des GdR MIA et ImaBio "Microscopie et traitement d'image", Nov 2018, Strasbourg, France Communication dans un congrès hal-02736491v1
Bio-image DATA in Life Sciences Research Infrastructures. From SCRATCH to intelligent integrated solutions Perrine Paul-Gilloteaux Storage Day, Jan 2018, Paris, France Communication dans un congrès hal-02737009v1
COMULIS, a new network to bridge (pre) clinical imaging and correlative Light Electron microscopy. Focus on multidimensional registration software Perrine Paul-Gilloteaux ASCB-EMBO 2018, Dec 2018, San Diego, United States Communication dans un congrès hal-02736408v1
Besoins en bio-informatique liés àl’activité de l’infrastructure nationale France Bio Imaging Perrine Paul-Gilloteaux Assemblée générale de l'INBS Institut Français de Bioinformatique, Jan 2017, paris, France Communication dans un congrès hal-02747035v1
Le recalage d'image sous ICY Perrine Paul-Gilloteaux,Xavier Heiligenstein Journée Thématique conjointe sur le repositionnement et la relocalisation/recalage, Nov 2017, Orléans, France Communication dans un congrès hal-02746899v1
Challenges in image correlation for CLEM (and partial solutions) Perrine Paul-Gilloteaux Crick Electron Microscopy Opening Symposium, Jul 2017, Londres, United Kingdom Communication dans un congrès hal-02747126v1
Filtrage spatio-temporel en IRM de flux sanguin 4D Sébastien Levilly,Jérôme Idier,Félicien Bonnefoy,David Le Touzé,Perrine Paul-Gilloteauxet al. XXVIème colloque GRETSI sur le Traitement du Signal et des Images, Sep 2017, Juan-Les-Pins, France Communication dans un congrès hal-01720339v1
Introduction to transformations and registrations Perrine Paul-Gilloteaux,Martin Schorb High-Accuracy CLEM: Applications at Room Temperature and in cryo, Dec 2017, Heidelberg, Germany Communication dans un congrès hal-02746508v1
Gestion et analyse d’images à moyen débit : exemple en microscopie confocale et sur lames virtuelles Perrine Paul-Gilloteaux Quand la bio-imagerie rencontre la bio-informatique : vers une intégration des données hétérogènes. Journée d'animation Biogenouest, Oct 2017, Rennes, France Communication dans un congrès hal-02745560v1
Flexible multidimensional registration software for correlative microscopies with refined accuracy mapping: eC-CLEM easy Cell Correlative Light to Electron Microscopy Perrine Paul-Gilloteaux Symposium and Workshop on correlative light, electron, and X-ray microscopy, Mar 2017, Harwell, United Kingdom Communication dans un congrès hal-02747152v1
Ec-CLEM: an open source plugin for CLEM image and volume registration Perrine Paul-Gilloteaux EMBL Workshop: From 3D Light to 3D Electron Microscopy, Mar 2016, Heidelberg, Germany Communication dans un congrès hal-02746474v1
Multiscale and multidimensional Image registration for CLEM : techniques and pitfalls Perrine Paul-Gilloteaux High-Accuracy Correlated Light and Electron Microscopy: Applications at Room Temperature and in Cryo, Apr 2016, Heildelberg, Germany Communication dans un congrès hal-02746687v1
Cycle de vie des images en microscopie : de l’acquisition au partage des données Perrine Paul-Gilloteaux La diversité tumorale à travers les plateformes technologiques franciliennes, Jan 2016, Paris, France Communication dans un congrès hal-02746957v1
Le numérique dans les biotechnologies: exemple de la bio imagerie Perrine Paul-Gilloteaux TechnoConférence Pole Image et Réseau #17, Jun 2016, Nantes, France Communication dans un congrès hal-02746143v1
Methodes de traitement et analyse d’images comme aide à la quantification des biomarqueurs en imagerie: de l’in vitro à la clinique Perrine Paul-Gilloteaux Ateliers du DHU2020, Jun 2015, Nantes, France Communication dans un congrès hal-02908867v1
Gestion du cycle de vie des images en microscopie pour la biologie: Extraction de connaissances à partir d’une base de données images Perrine Paul-Gilloteaux Séminaire de l'INRA OPEN DATA, Dec 2015, Montpellier, France Communication dans un congrès hal-02908891v1
Développement et déploiement d’une base de données image commune : bilan Perrine Paul-Gilloteaux,Corinne Laplace-Builhé Imagerie et cancers : optique et imagerie multiphotonique, Sep 2014, Paris, France Communication dans un congrès hal-02746819v1
Robust parametric stabilization of moving cells with intensity correction in light microscopy image sequences Solene Ozere,Patrick Bouthemy,Fabien Spindler,Perrine Paul-Gilloteaux,Charles Kervrann ISBI - IEEE International Symposium on Biomedical Imaging, Apr 2013, San-Francisco, United States. pp.468-471, ⟨10.1109/ISBI.2013.6556513⟩ Communication dans un congrès hal-00931371v1
Correlation and variational approaches for motion and diffusion estimation in fluorescence imaging Denis Fortun,Chen Chen,Perrine Paul-Gilloteaux,François Waharte,Jean Salameroet al. EUSIPCO 2013 - European Signal Processing Conference, Sep 2013, Marrakech, Morocco. pp.1-5 Communication dans un congrès hal-00931408v1
Aggregation of patch-based estimations for illumination-invariant optical flow in live cell imaging Denis Fortun,Patrick Bouthemy,Perrine Paul-Gilloteaux,Charles Kervrann ISBI - IEEE International Symposium on Biomedical Imaging, Apr 2013, San-Francisco, United States. pp.660-663, ⟨10.1109/ISBI.2013.6556561⟩ Communication dans un congrès hal-00931377v1
Computational modeling of the consequences of embryonic neurogenesis disorders Perrine Paul-Gilloteaux,Renata Basto,Veronique Marthiens Molecular Biology of The Cell. ASCB, 2013, Nouvelle-Orleans, United States. pp.3775-3775, ⟨10.1091/mbc.E13-10-0584⟩ Communication dans un congrès hal-02908946v1
Correlation and variational approaches for motion and diffusion estimation in fluorescence imaging Denis Fortun,Chen Chen,Perrine Paul-Gilloteaux,François Waharte,Jean Salameroet al. European Light Microscopy Initiative (ELMI'13), May 2013, Arcachon, France Communication dans un congrès hal-00931593v1
Developpement des methodes de correlation d images pour l analyse de la mobilite moleculaire dans un systeme biologique complexe spatialement et temporellement C. Chen,P. Paul-Gilloteaux,T. Vignaud,J. Salamero,F. Waharte OPTDIAG, May 2012, Paris, France Communication dans un congrès hal-02746408v1
Image Data Base on a microscopy facility: Presentation and use for remote collaborations Perrine Paul-Gilloteaux Nouvelles méthodologies en imagerie du vivant, Dec 2012, Lyon, France Communication dans un congrès hal-02746303v1
Study of the 3D repartition of vesicles normalized by the distance to the cell periphery Perrine Paul-Gilloteaux,Elisabetta Padovan,Claire L Hivroz Focus On Microscopy, Apr 2011, Konstanz, Germany Communication dans un congrès hal-02746059v1
Automatic quality assessment for fluorescence microscopy images Perrine Paul,Dimitrios Kalamatianos,Heiko Duessmann,Heinrich Huber 2008 8th IEEE International Conference on Bioinformatics and BioEngineering (BIBE), Oct 2008, Athens, France. pp.1-6, ⟨10.1109/BIBE.2008.4696665⟩ Communication dans un congrès hal-02735370v1
Image Guidance in neurosurgical procedures, the &quot;VISAGES&quot; point of view Christian Barillot,Pierrick Coupé,Bernard Gibaud,Pierre Hellier,Pierre Janninet al. 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Apr 2007, Arlington, United States. pp.1056-1059, ⟨10.1109/ISBI.2007.357037⟩ Communication dans un congrès inserm-00152147v1
A surface registration approach for video-based analysis of intraoperative brain surface deformations Perrine Paul,Aurélie Quere,Élise Arnaud,Xavier Morandi,Pierre Jannin Oct 2006, pp.0 Communication dans un congrès inserm-00109455v1
Knowledge modeling in image guided neurosurgery: application in understanding intra-operative brain shift Perrine Paul,Xavier Morandi,Pierre Jannin,Julien Cohen-Adad SPIE Medical Imaging 2006: Visualization, Image-Guided Procedures and Display, Mar 2006, San Diego, United States. ⟨10.1117/12.655752⟩ Communication dans un congrès inserm-00147527v1
Virtualité augmentée en neurochirurgie guidée par l'image Perrine Paul,Oliver J. Fleig,Xavier Morandi,Pierre Jannin 2005, pp.99-104 Communication dans un congrès inserm-00138138v1
Performance Evaluation of a Stereoscopic Based 3D Surface Localiser for Image-Guided Neurosurgery Perrine Paul,Oliver J. Fleig,Sabine Tranchant,Pierre Jannin MICCAI, Sep 2004, Saint-Malo, France. pp.510-517, ⟨10.1007/978-3-540-30136-3_63⟩ Communication dans un congrès hal-02735433v1

Poster de conférence (8)

The ELIXIR research software ecosystem Hans-Ioan Ienasescu,Salvador Capella-Gutierrez,Frederik Coppens,José Mª Fernandez,Alban Gaignardet al. 24th annual Bioinformatics Open Source Conference (BOSC 2023), Jul 2023, Lyon, France. , ⟨10.7490/f1000research.1119595.1⟩ Poster de conférence hal-05206335v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2019) Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. 3rd NEUBIAS Bioimage Analysis Community Conference 2019, Jun 2020, Luxembourg, Luxembourg Poster de conférence hal-02910949v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2020) Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. ELIXIR All Hands 2020, Jun 2020, Virtual, United Kingdom Poster de conférence hal-02910948v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. NEUBIAS, Feb 2019, Luxembourg, Luxembourg. ⟨10.7490/f1000research.1115257.1⟩ Poster de conférence hal-02267597v1
Analyse d’un échantillon en 3 dimensions par une technique de Serial Block Face Imaging amovible Marine Malloci,Stéphanie Blandin,Paul Dorval,Philippe Hulin,Pierre-Alix Danceret al. AFH 2019, Jun 2019, Strasbourg, France Poster de conférence hal-02267585v1
Wall Shear Stress Quantification in the context of 4D Flow MRI Simulation on Carotids Levilly Sébastien,Jérôme Idier,Félicien Bonnefoy,David Le Touzé,Perrine Paul-Gilloteauxet al. Society for Magnetic Resonance Angiography conference, 31st Annual International Conference, Aug 2019, Nantes, France Poster de conférence hal-03466557v1
Registration and error estimation in correlated multimodal imaging Guillaume Potier,Stephan Kunne,Frédéric Lavancier,Perrine Paul-Gilloteaux Correlated Multimodal Imaging Conference, Nov 2019, Vienna, Austria Poster de conférence hal-02744368v1
Spatio-temporal filtering of blood flow in 4D Phase-Contrast MRI Sébastien Levilly,Jérôme Idier,David Le Touzé,Perrine Paul-Gilloteaux,Félicien Bonnefoyet al. Society for Magnetic Resonance Angiography, 29th Annual International Conference (SMRA 2017), Oct 2017, Stellenbosch, South Africa. 61, pp.3163 - 3178, 2015 Poster de conférence hal-01720378v1

Chapitre d'ouvrage (9)

Computer-assisted analysis of multimodal image data—perspectives and conclusion Nataša Sladoje,Joakim Lindblad,Perrine Paul-Gilloteaux Imaging Modalities for Biological and Preclinical Research: A Compendium, Volume 2, IOP Publishing, 2021, ⟨10.1088/978-0-7503-3747-2ch30⟩ Chapitre d'ouvrage hal-03232548v1
Resolving the Process of Clathrin Mediated Endocytosis Using Correlative Light and Electron Microscopy (CLEM) Martin Schorb,Perrine Paul-Gilloteaux Kota Miura; Nataša Sladoje. Bioimage Data Analysis Workflows, Springer, pp.143-166, 2020, Learning Materials in Biosciences, 978-3-030-22385-4. ⟨10.1007/978-3-030-22386-1_6⟩ Chapitre d'ouvrage hal-02735825v1
Workflows and Components of Bioimage Analysis Kota Miura,Perrine Paul-Gilloteaux,Sébastien Tosi,Julien Colombelli Bioimage Data Analysis Workflows. Learning Materials in Biosciences. Springer, Cham, pp.1-7, 2020, ⟨10.1007/978-3-030-22386-1_1⟩ Chapitre d'ouvrage hal-02735486v1
Correlating Data from Imaging Modalities Perrine Paul-Gilloteaux,Martin Schorb Correlative Imaging: Focusing on the Future, 1, Wiley, 2019, ⟨10.1002/9781119086420.ch11⟩ Chapitre d'ouvrage hal-02735744v1
A Biologist-Friendly Method to Analyze Cross-Correlation Between Protrusion Dynamics and Membrane Recruitment of Actin Regulators Perrine Paul-Gilloteaux,François Waharte,Manish Kumar Singh,Maria Carla Parrini Methods Mol Biol, pp.279-289, 2018 Chapitre d'ouvrage hal-02267604v1
Quantitative Evaluation of Multicellular Movements in Drosophila Embryo Perrine Paul-Gilloteaux,Sébastien Tosi Kota Miura. Bioimage Data Analysis, Wiley-VCH, 2016, 978-3-527-80092-6 Chapitre d'ouvrage hal-02910999v1
Bioimage Analysis Tools Kota Miura,Sébastien Tosi,Christoph Möhl,Chong Zhang,Perrine Paul-Gilloteauxet al. Kota Miura. Bioimage Data Analysis, Wiley-VCH, 2016, 978-3-527-80092-6 Chapitre d'ouvrage hal-02910986v1
Cell Polarity: Focal Adhesion and Actin Dynamics in Migrating Cells Perrine Paul-Gilloteaux,Christoph Möhl Kota Miura. Bioimage Data Analysis, Wiley-VCH, pp.198-218, 2016, 978-3-527-80092-6 Chapitre d'ouvrage hal-02910995v1
Quantitative analysis of flagellar proteins in Drosophila sperm tails Teresa Mendes Maia,Perrine Paul-Gilloteaux,Renata Basto Methods in Cilia & Flagella, 127, Elsevier, pp.263-278, 2015, Methods in Cell Biology, ⟨10.1016/bs.mcb.2015.01.003⟩ Chapitre d'ouvrage hal-03453032v1

Brevet (1)

Microscopy control system and method Heinrich Huber,Heiko Dussmann,Perrine Paul-Gilloteaux,Jakub Wenus,Dimitrios Kalamatianoset al. United States, Patent n° : US 2010/0251438 A1. 2010, https://patentimages.storage.googleapis.com/bb/3d/c1/00174666d137a7/US20100251438A1.pdf Brevet hal-02735674v1

Autre publication scientifique (4)

NEUBIAS WEBTOOL biii.eu A unique database of image processing, analysis tools and workflows for and by the bioimaging community Perrine Paul-Gilloteaux F1000Research NEUBIAS gateway, 2020, ⟨10.7490/f1000research.1117948.1⟩ Autre publication scientifique hal-02744892v1
Organization and Teaching EMBL Course Bio Image Data ANalysis Perrine Paul-Gilloteaux,Kota Miura,Sébastien Tosi 2017 Autre publication scientifique hal-02746591v1
Organization and Teaching EMBL Course Bio Image Data Analysis Perrine Paul-Gilloteaux,Kota Miura,Sébastien Tosi 2016 Autre publication scientifique hal-02746656v1
Organization and Teaching EMBL Course Bio Image Data Analysis Perrine Paul-Gilloteaux,Kota Miura,Sébastien Tosi 2015 Autre publication scientifique hal-02746618v1

Pré-publication, Document de travail (7)

Tripartite ER-Mitochondria-Lipid Droplets contact sites control adipocyte metabolic flexibility Marie Palard,Gilliane Chadeuf,Maxime Carpentier,Samuel Frey,Mikael Croyalet al. 2025 Pré-publication, Document de travail hal-05376862v1
Bio-Image Informatics Index BIII: A unique database of image analysis tools and workflows for and by the bioimaging community Chong Zhang,Alban Gaignard,Matus Kalas,Florian Levet,Felipe Delestroet al. 2024 Pré-publication, Document de travail hal-04453549v1
Label-free imaging of large samples: 3D rendering and morphological analysis within histological workflows using serial block face imaging Marine Malloci,Perrine de Villemagne,Paul Dorval,Magalie Feyeux,Stéphanie Blandinet al. 2022 Pré-publication, Document de travail hal-03745095v1
QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy Glyn Nelson,Ulrike Boehm,Steve Bagley,Peter Bajcsy,Johanna Bischofet al. 2023 Pré-publication, Document de travail hal-03120748v1
Kinetics of Plasmodium midgut invasion in Anopheles mosquitoes Gloria Volohonsky,Perrine Paul-Gilloteaux,Jitka Štáfková,Julien Soichot,Jean Salameroet al. 2020 Pré-publication, Document de travail hal-02509933v1
Correlative cryo-structured illumination fluorescence microscopy and soft X-ray tomography elucidates reovirus intracellular release pathway Ilias Kounatidis,Megan L Stanifer,Michael A Phililips,Perrine Paul-Gilloteaux,Xavier Heiligensteinet al. 2020 Pré-publication, Document de travail hal-02509948v1
BIAFLOWS: A collaborative framework to benchmark bioimage analysis workflows Ulysse Rubens°,Romain Mormont°,Volker Baecker,Gino Michiels,Lassi Paavolainenet al. 2019 Pré-publication, Document de travail hal-02267577v1

Rapport (1)

Euro BioImaging Preparatory Phase II Project Perrine Paul-Gilloteaux,Jason Swedlow,Gabriella Rustici [0] Euro-Bioimaging. 2016 Rapport hal-03085833v1

Thèse (1)

Neurochirurgie guidée par l'image : visualisation mixte et quantification des déformations cérébrales peropératoires à l'aide de reconstructions stéréoscopiques de la surface corticale Perrine Paul-Gilloteaux Vision par ordinateur et reconnaissance de formes [cs.CV]. Universite de Rennes 1, 2006. Français. ⟨NNT : ⟩ Thèse tel-02908473v1

Proceedings/Recueil des communications (1)

Multiview contrastive learning for myelodysplastic syndrome screening : adding deep image representation to blood parameters Cédric de Almeida Braga,Maxence Bauvais,Samy Benhouhou,Alice Garnier,Pierre Peterlinet al. Computer-Aided Diagnosis, Feb 2025, San Diego, France. Journal of Medical Imaging, 13407, SPIE, pp.109, 2025, ⟨10.1117/12.3047178⟩ Proceedings/Recueil des communications hal-05070292v1

Article de blog scientifique (1)

Rythme'n'Sciences #2 : Intelligence Artificielle et Pop Music Chandrou Droupix Koumar,Perrine Paul-Gilloteaux 2017, https://youtu.be/FmxKvzjR8hM Article de blog scientifique hal-02737062v1