Pierre Bonnet

187
Documents

Publications

Publications

Deposit thumbnail

Cooperative learning of Pl@ntNet's Artificial Intelligence algorithm: how does it work and how can we improve it?

Tanguy Lefort , Antoine Affouard , Benjamin Charlier , Jean-Christophe Lombardo , Mathias Chouet et al.

Methods in Ecology and Evolution, 2026, 17 (2), pp.392-403. ⟨10.1111/2041-210X.14486⟩

Article dans une revue hal-04603038v2
Deposit thumbnail

Adapting a globally-trained Plant identification model for multi-species detection of invasive alien plants in roadside imagery

Hervé Goeau , Vincent Espitalier , Jean-Christophe Lombardo , Christophe Botella , Toke Thomas Hoye et al.

Biodiversity Information Science and Standards, 2025, 10, pp.e183020. ⟨10.3897/biss.10.183020⟩

Article dans une revue hal-05516260v1
Deposit thumbnail

PlantCLEF 2025: Advancing AI-based Multi-Species Plant Identification in Vegetation Quadrats for Supporting Environmental Law and Biodiversity Monitoring

Giulio Martellucci , Hervé Goëau , Pierre Bonnet , Fabrice Vinatier , Alexis Joly

Biodiversity Information Science and Standards, 2025, 9, pp.e181733. ⟨10.3897/biss.9.181733⟩

Article dans une revue hal-05442222v1
Deposit thumbnail

Using reflectance spectra and Pl@ntNet to identify herbarium specimens: a case study with <i>Lithocarpus</i>

Barbara M. Neto‐bradley , Pierre Bonnet , Hervé Goëau , Alexis Joly , Jeannine Cavender‐bares et al.

New Phytologist, 2025, ⟨10.1111/nph.70258⟩

Article dans une revue hal-05155975v1
Deposit thumbnail

PlantAIM: A new baseline model integrating global attention and local features for enhanced plant disease identification

Abel Yu Hao Chai , Sue Han Lee , Fei Siang Tay , Hervé Goëau , Pierre Bonnet et al.

Smart Agricultural Technology, 2025, 10, pp.100813. ⟨10.1016/j.atech.2025.100813⟩

Article dans une revue hal-05017656v1
Deposit thumbnail

Learning the syntax of plant assemblages

César Leblanc , Pierre Bonnet , Maximilien Servajean , Wilfried Thuiller , Milan Chytrý et al.

Nature Plants, 2025, 11, pp.2026-2040. ⟨10.1038/s41477-025-02105-7⟩

Article dans une revue hal-05313746v1

Adapting a global plant identification model to detect invasive alien plant species in high-resolution road side images

Vincent Espitalier , Jean-Christophe Lombardo , Hervé Goëau , Christophe Botella , Toke Thomas Høye et al.

Ecological Informatics, 2025, 89, pp.103129. ⟨10.1016/j.ecoinf.2025.103129⟩

Article dans une revue hal-05046527v1
Deposit thumbnail

Fully automatic extraction of morphological traits from the web: Utopia or reality?

Diego Marcos , Robert van de Vlasakker , Ioannis N. Athanasiadis , Pierre Bonnet , Hervé Goëau et al.

Applications in Plant Sciences, 2025, 13 (3), ⟨10.1002/aps3.70005⟩

Article dans une revue hal-05101346v1
Deposit thumbnail

Can we harmonize the monitoring of plants and pollinators?

Emmanuelle Porcher , Pierre Bonnet , Christian Damgaard , Pieter de Frenne , Nicolas Deguines et al.

New Phytologist, 2024, 244 (1), pp.39-42. ⟨10.1111/nph.20038⟩

Article dans une revue hal-04680061v1

Beyond supervision: Harnessing self-supervised learning in unseen plant disease recognition

Abel Yu Hao Chai , Sue Han Lee , Fei Siang Tay , Pierre Bonnet , Alexis Joly

Neurocomputing, 2024, 610, pp.128608. ⟨10.1016/j.neucom.2024.128608⟩

Article dans une revue hal-04815172v1
Deposit thumbnail

Detecting flowers on imagery with computer vision to improve continental scale grassland biodiversity surveying

Neija Elvekjaer , Laura Martínez-Sanchez , Pierre Bonnet , Alexis Joly , Maria Luisa Paracchini et al.

Ecological Solutions and Evidence, 2024, 5, ⟨10.1002/2688-8319.12324⟩

Article dans une revue hal-04593804v1
Deposit thumbnail

Mapping global orchid assemblages with deep learning provides novel conservation insights

Joaquim Estopinan , Maximilien Servajean , Pierre Bonnet , Alexis Joly , François Munoz

Ecological Informatics, 2024, 81, pp.102627. ⟨10.1016/j.ecoinf.2024.102627⟩

Article dans une revue hal-04581266v1
Deposit thumbnail

Revolutionizing Plant Pathogen Conservation: The Past, Present, and Future of AI in Preserving Natural Ecosystems

Sue Han Lee , Zhe Rui Liaw , Yu Hao Chai , Shien Lin Ng , Pierre Bonnet et al.

Biodiversity Information Science and Standards, 2024, 8, pp.e133055. ⟨10.3897/biss.8.133055⟩

Article dans une revue hal-04701227v1
Deposit thumbnail

A deep-learning framework for enhancing habitat identification based on species composition

César Leblanc , Pierre Bonnet , Maximilien Servajean , Milan Chytrý , Svetlana Aćić et al.

Applied Vegetation Science, 2024, 27 (3), pp.e12802. ⟨10.1111/avsc.12802⟩

Article dans une revue hal-04700157v1
Deposit thumbnail

Estimating Compositions and Nutritional Values of Seed Mixes Based on Vision Transformers

Shamprikta Mehreen , Hervé Goëau , Pierre Bonnet , Sophie Chau , Julien Champ et al.

Plant Phenomics, 2023, 5 (#0112), ⟨10.34133/plantphenomics.0112⟩

Article dans une revue hal-04322179v1
Deposit thumbnail

Envisaging a global infrastructure to exploit the potential of digitised collections

Quentin Groom , Mathias Dillen , Wouter Addink , Arturo Ariño , Christian Bölling et al.

BDJ Open, 2023, 11, ⟨10.3897/BDJ.11.e109439⟩

Article dans une revue hal-03871553v1
Deposit thumbnail

Advances in plant imaging across scales

Pamela S Soltis , Luiza Teixeira‐costa , Pierre Bonnet , R Gil Nelson

Applications in Plant Sciences, 2023, 11, ⟨10.1002/aps3.11550⟩

Article dans une revue hal-04286816v1
Deposit thumbnail

Synergizing Digital, Biological, and Participatory Sciences for Global Plant Species Identification: Enabling access to a worldwide identification service

Pierre Bonnet , Antoine Affouard , Jean-Christophe Lombardo , Mathias Chouet , Hugo Gresse et al.

Biodiversity Information Science and Standards, 2023, 7, pp.e112545. ⟨10.3897/biss.7.112545⟩

Article dans une revue hal-04430929v1
Deposit thumbnail

Pl@ntNet Crops: merging citizen science observations and structured survey data to improve crop recognition for agri-food-environment applications

Marijn van Der Velde , Hervé Goëau , Pierre Bonnet , Raphaël d'Andrimont , Martin Yordanov et al.

Environmental Research Letters, 2023, 18 (2), pp.025005. ⟨10.1088/1748-9326/acadf3⟩

Article dans une revue hal-03965684v1
Deposit thumbnail

Modern Approaches to the Monitoring of Biоdiversity (MAMBO)

Toke Thomas Høye , Tom August , Mario V Balzan , Koos Biesmeijer , Pierre Bonnet et al.

Research Ideas and Outcomes, 2023, 9, pp.e116951. ⟨10.3897/rio.9.e116951⟩

Article dans une revue hal-04405026v1
Deposit thumbnail

Deep Species Distribution Modeling From Sentinel-2 Image Time-Series: A Global Scale Analysis on the Orchid Family

Joaquim Estopinan , Maximilien Servajean , Pierre Bonnet , François Munoz , Alexis Joly

Frontiers in Plant Science, 2022, 13, pp.839327. ⟨10.3389/fpls.2022.839327⟩

Article dans une revue hal-03693593v1
Deposit thumbnail

Dynamic Species Distribution Modeling Reveals the Pivotal Role of Human-Mediated Long-Distance Dispersal in Plant Invasion

Christophe Botella , Pierre Bonnet , Cang Hui , Alexis Joly , David M. Richardson

Biology, 2022, 11 (9), pp.1293. ⟨10.3390/biology11091293⟩

Article dans une revue hal-03771760v1
Deposit thumbnail

Can Artificial Intelligence Help in the Study of Vegetative Growth Patterns from Herbarium Collections? An Evaluation of the Tropical Flora of the French Guiana Forest

Hervé Goëau , Titouan Lorieul , Patrick Heuret , Alexis Joly , Pierre Bonnet

Plants, 2022, 11 (4), pp.530-552. ⟨10.3390/plants11040530⟩

Article dans une revue hal-03601464v1
Deposit thumbnail

How Networks of Citizen Observatories Can Increase the Quality and Quantity of Citizen-Science-Generated Data Used to Monitor SDG Indicators

Sasha Woods , Maria Daskolia , Alexis Joly , Pierre Bonnet , Karen Soacha et al.

Sustainability, 2022, 14 (7), ⟨10.3390/su14074078⟩

Article dans une revue hal-03658842v1
Deposit thumbnail

Very High Resolution Species Distribution Modeling Based on Remote Sensing Imagery: How to Capture Fine-Grained and Large-Scale Vegetation Ecology With Convolutional Neural Networks?

Benjamin Deneu , Alexis Joly , Pierre Bonnet , Maximilien Servajean , François Munoz

Frontiers in Plant Science, 2022, 13, ⟨10.3389/fpls.2022.839279⟩

Article dans une revue hal-03695760v1
Deposit thumbnail

Jointly estimating spatial sampling effort and habitat suitability for multiple species from opportunistic presence‐only data

Christophe Botella , Alexis Joly , Pierre Bonnet , François Munoz , Pascal Monestiez

Methods in Ecology and Evolution, 2021, 12 (5), pp.933-945. ⟨10.1111/2041-210X.13565⟩

Article dans une revue hal-03150701v1
Deposit thumbnail

Convolutional neural networks improve species distribution modelling by capturing the spatial structure of the environment

Benjamin Deneu , Maximilien Servajean , Pierre Bonnet , Christophe Botella , François Munoz et al.

PLoS Computational Biology, 2021, 17 (4), pp.e1008856. ⟨10.1371/journal.pcbi.1008856⟩

Article dans une revue hal-03220977v1
Deposit thumbnail

Customized e-floras: How to develop your own project on the Pl@ntNet platform

Antoine Affouard , Mathias Chouet , Jean-Christophe Lombardo , Hugo Gresse , Hervé Goëau et al.

Biodiversity Information Science and Standards, 2021, 5, pp.1-4. ⟨10.3897/biss.5.73857⟩

Article dans une revue hal-03338811v1
Deposit thumbnail

FOCUS PROJET #2: Pl@ntNet

Pierre Bonnet , Delphine Mézière , Diane Le Henaff

NOV'AE, 2021, Sciences et Recherches Participatives à INRAE, Numéro Spécial 01, pp.42-46. ⟨10.17180/novae-2022-NS01-art17⟩

Article dans une revue hal-04625327v1
Deposit thumbnail

AI-based Identification of Plant Photographs from Herbarium Specimens

Hervé Goëau , Pierre Bonnet , Alexis Joly

Biodiversity Information Science and Standards, 2021, 5, pp.1-4. ⟨10.3897/biss.5.73751⟩

Article dans une revue hal-03338823v1
Deposit thumbnail

Machine Learning Undercounts Reproductive Organs on Herbarium Specimens but Accurately Derives Their Quantitative Phenological Status: A Case Study of Streptanthus tortuosus

Natalie Love , Pierre Bonnet , Hervé Goëau , Alexis Joly , Susan Mazer

Plants, 2021, 10 (11), pp.2471. ⟨10.3390/plants10112471⟩

Article dans une revue hal-03454183v1

Identifying gaps in the photographic record of the vascular plant flora of the Americas

Nigel C. A. Pitman , Tomomi Suwa , Carmen Ulloa Ulloa , James Miller , James Solomon et al.

Nature Plants, 2021, 7, pp.1010-1014. ⟨10.1038/s41477-021-00974-2⟩

Article dans une revue hal-03312029v1
Deposit thumbnail

A New Method for Counting Reproductive Structures in Digitized Herbarium Specimens Using Mask R-CNN

Charles C. Davis , Julien Champ , Daniel Park , Ian Breckheimer , Goia Lyra et al.

Frontiers in Plant Science, 2020, 11, ⟨10.3389/fpls.2020.01129⟩

Article dans une revue hal-02909794v1
Deposit thumbnail

A new fine‐grained method for automated visual analysis of herbarium specimens: A case study for phenological data extraction

Hervé Goëau , Adán Mora‐fallas , Julien Champ , Natalie Lauren Rossington Love , Susan Mazer et al.

Applications in Plant Sciences, 2020, 8 (6), pp.#e11368. ⟨10.1002/aps3.11368⟩

Article dans une revue hal-02894994v1
Deposit thumbnail

Bias in presence-only niche models related to sampling effort and species niches: Lessons for background point selection

Christophe Botella , Alexis Joly , Pascal Monestiez , Pierre Bonnet , François Munoz

PLoS ONE, 2020, 15 (5), pp.e0232078. ⟨10.1371/journal.pone.0232078⟩

Article dans une revue hal-02639237v1
Deposit thumbnail

Pl@ntNet Services, a Contribution to the Monitoring and Sharing of Information on the World Flora

Pierre Bonnet , Julien Champ , Hervé Goëau , Fabian-Robert Stöter , Benjamin Deneu et al.

Biodiversity Information Science and Standards, 2020, 4, pp.e58933. ⟨10.3897/biss.4.58933⟩

Article dans une revue hal-02973673v1
Deposit thumbnail

WCSdb: a database of wild <i>Coffea</i> species

Romain Guyot , Perla Hamon , Emmanuel Couturon , Nathalie Raharimalala , Jean-Jacques Rakotomalala et al.

Database - The journal of Biological Databases and Curation, 2020, 2020, ⟨10.1093/database/baaa069⟩

Article dans une revue (data paper) hal-04182535v1
Deposit thumbnail

Machine Learning Using Digitized Herbarium Specimens to Advance Phenological Research

Katelin D. Pearson , Gil Nelson , Myla Aronson , Pierre Bonnet , Laura Brenskelle et al.

Bioscience, 2020, 70 (7), pp.610-620. ⟨10.1093/biosci/biaa044⟩

Article dans une revue hal-02573627v1
Deposit thumbnail

Instance segmentation for automated weeds and crops detection in farmlands

Adán Mora-Fallas , Hervé Goëau , Alexis Joly , Pierre Bonnet , Erick Mata-Montero

Revista Tecnología en Marcha, 2020, pp.13-17. ⟨10.18845/tm.v33i5.5069⟩

Article dans une revue hal-02989049v1
Deposit thumbnail

AI Naturalists Might Hold the Key to Unlocking Biodiversity Data in Social Media Imagery

Tom August , Oliver Pescott , Alexis Joly , Pierre Bonnet

Patterns, 2020, 1 (7), pp.100116. ⟨10.1016/j.patter.2020.100116⟩

Article dans une revue hal-02989043v1
Deposit thumbnail

How citizen scientists contribute to monitor protected areas thanks to automatic plant identification tools

Pierre Bonnet , Alexis Joly , Jean-Michel Faton , Susan Brown , David Kimiti et al.

Ecological Solutions and Evidence, 2020, 1 (2), ⟨10.1002/2688-8319.12023⟩

Article dans une revue hal-02937618v1
Deposit thumbnail

Synthesis of NiF 2 and NiF 2 ·4H 2 O Nanoparticles by Microemulsion and Their Self-Assembly

Hameed Ullah , Nicolas Batisse , Katia Guérin , Guillaume Rogez , Pierre Bonnet

Langmuir, 2020, 36 (29), pp.8461-8475. ⟨10.1021/acs.langmuir.0c00889⟩

Article dans une revue hal-02926198v1
Deposit thumbnail

New perspectives on plant disease characterization based on deep learning

Sue Han Lee , Hervé Goëau , Pierre Bonnet , Alexis Joly

Computers and Electronics in Agriculture, 2020, 170, pp.105220. ⟨10.1016/j.compag.2020.105220⟩

Article dans une revue hal-02470280v1
Deposit thumbnail

Contribution citoyenne au suivi de la flore d'un parc national français, un exemple remarquable à l'échelle du Parc national des Cévennes

Pierre Bonnet , Hervé Goëau , Frantz Hopkins , Errol Véla , Amandine Sahl et al.

Carnets Botaniques, 2020, 21, pp.1-9. ⟨10.34971/zaz0-n247⟩

Article dans une revue hal-02981760v1
Deposit thumbnail

Attention-Based Recurrent Neural Network for Plant Disease Classification

Sue Han Lee , Hervé Goëau , Pierre Bonnet , Alexis Joly

Frontiers in Plant Science, 2020, 11, ⟨10.3389/fpls.2020.601250⟩

Article dans une revue hal-03064464v1
Deposit thumbnail

Instance segmentation for the fine detection of crop and weed plants by precision agricultural robots

Julien Champ , Adán Mora‐fallas , Hervé Goëau , Erick Mata‐montero , Pierre Bonnet et al.

Applications in Plant Sciences, 2020, 8 (7), pp.e11373. ⟨10.1002/aps3.11373⟩

Article dans une revue hal-02910844v1
Deposit thumbnail

Toward a large-scale and deep phenological stage annotation of herbarium specimens: Case studies from temperate, tropical, and equatorial floras

Titouan Lorieul , Katelin D. Pearson , Elizabeth R. Ellwood , Hervé Goëau , Jean‐francois Molino et al.

Applications in Plant Sciences, 2019, 7 (3), pp.e01233. ⟨10.1002/aps3.1233⟩

Article dans une revue hal-02137748v1
Deposit thumbnail

Accelerating the automated detection, counting and measurements of reproductive organs in herbarium collections in the era of deep learning

Adán Mora-Fallas , Hervé Goeau , Susan J. Mazer , Natalie Love , Erick Mata-Montero et al.

Biodiversity Information Science and Standards, 2019, 3, pp.e37341. ⟨10.3897/biss.3.37341⟩

Article dans une revue hal-05177281v1
Deposit thumbnail

Au-delà de la collecte des données dans les projets de sciences citoyennes : ouvrir le champ de l’analyse et de l’interprétation des données aux citoyens.

Sylvie Blangy , Valentin Lhoste , Céline Arnal , Jennifer Carré , Anaïs Chapot et al.

Technologie et innovation, 2018, 18- 3, pp.1-27. ⟨10.21494/ISTE.OP.2018.0289⟩

Article dans une revue hal-01824900v1

Effect of fluorination on the stability of carbon nanofibres in organic solvents

Nadiège Nomède-Martyr , Elodie Disa , Katia Guérin , Pierre Bonnet , Marc Dubois

Comptes Rendus. Chimie, 2018, 21 (8), pp.791 - 799. ⟨10.1016/j.crci.2018.02.012⟩

Article dans une revue hal-01841243v1

Surface reactivity of uranium hexafluoride (UF 6 )

Bertrand Morel , Ania Selmi , Laurent Moch , Jean-Michel Hiltbrunner , Mickaël Achour et al.

Comptes Rendus. Chimie, 2018, 21 (8), pp.782 - 790. ⟨10.1016/j.crci.2018.05.006⟩

Article dans une revue hal-01841268v1
Deposit thumbnail

Species distribution modeling based on the automated identification of citizen observations

Christophe Botella , Alexis Joly , Pierre Bonnet , Pascal P. Monestiez , François Munoz

Applications in Plant Sciences, 2018, Green Digitization: Online Botanical Collections Data Answering Real‐World Questions, 6 (2), pp.1-11. ⟨10.1002/aps3.1029⟩

Article dans une revue hal-01739481v1
Deposit thumbnail

Integrated dataset of anatomical, morphological, and architectural traits for plant species in Madagascar

Amira Azizan , Emma Guillon , Yves Caraglio , Patrick Langbour , Sébastien Paradis et al.

Data in Brief, 2017, 15, pp.92 - 96. ⟨10.1016/j.dib.2017.09.004⟩

Article dans une revue (data paper) hal-01626055v1
Deposit thumbnail

Going deeper in the automated identification of Herbarium specimens

Jose Carranza-Rojas , Hervé Goëau , Pierre Bonnet , Erick Mata-Montero , Alexis Joly

BMC Evolutionary Biology, 2017, 17 (1), pp.181. ⟨10.1186/s12862-017-1014-z⟩

Article dans une revue hal-01580070v1
Deposit thumbnail

A look inside the Pl@ntNet experience

Alexis Joly , Pierre Bonnet , Hervé Goëau , Julien Barbe , Souheil Selmi et al.

Multimedia Systems, 2016, 22 (6), pp.751-766. ⟨10.1007/s00530-015-0462-9⟩

Article dans une revue hal-01182775v1
Deposit thumbnail

Plant identification: Man vs. Machine

Pierre Bonnet , Alexis Joly , Hervé Goëau , Julien Champ , Christel Vignau et al.

Multimedia Tools and Applications, 2016, LifeCLEF 2014 plant identification challenge, 75 (3), pp.1647-1665. ⟨10.1007/s11042-015-2607-4⟩

Article dans une revue hal-01182778v1
Deposit thumbnail

Categorizing plant images at the variety level: Did you say fine-grained?

Julien Champ , Titouan Lorieul , Pierre Bonnet , Najate Maghnaoui , Christophe Sereno et al.

Pattern Recognition Letters, 2016, 81, pp.71-79. ⟨10.1016/j.patrec.2016.05.022⟩

Article dans une revue lirmm-01348914v1

Interactive plant identification based on social image data

Alexis Joly , Hervé Goëau , Pierre Bonnet , Vera Bakić , Julien Barbe et al.

Ecological Informatics, 2014, 23, pp.22-34. ⟨10.1016/j.ecoinf.2013.07.006⟩

Article dans une revue hal-00908872v2

Pl@ntNet, un réseau et des outils pour une recherche participative

Alexis Joly , Pierre Bonnet , Hervé Goëau

Interstices, 2014

Article dans une revue hal-01350266v1

Noncovalent Functionalization of Single-Wall Carbon Nanotubes for the Elaboration of Gas Sensor Dedicated to BTX Type Gases: The Case of Toluene

Amadou Ndiaye , Pierre Bonnet , Alain Pauly , Marc Dubois , Jérôme Brunet et al.

Journal of Physical Chemistry C, 2013, 117 (39), pp.20217 - 20228. ⟨10.1021/jp402787f⟩

Article dans une revue hal-01664923v1

Elaboration of single wall carbon nanotubes-based gas sensors: Evaluating the bundling effect on the sensor performance

Amadou Ndiaye , Christelle Varenne , Pierre Bonnet , Elodie Petit , Laurent Spinelle et al.

Thin Solid Films, 2012, 520 (13), pp.4465 - 4469. ⟨10.1016/j.tsf.2012.02.071⟩

Article dans une revue istex hal-01664921v1

Elaboration of SWNTs-based gas sensors using dispersion techniques: Evaluating the role of the surfactant and its influence on the sensor response

Amadou L. Ndiaye , Christelle Varenne , Pierre Bonnet , Elodie Petit , Laurent Spinelle et al.

Sensors and Actuators B: Chemical, 2012, 162 (1), pp.95 - 101. ⟨10.1016/j.snb.2011.12.041⟩

Article dans une revue istex hal-01664917v1

Pl@ntwood: a computer-assisted identification tool for 110 species of Amazon trees based on wood anatomical features

Carolina Sarmiento , Pierre Détienne , Christine Heinz , Jean-François Molino , Pierre Grard et al.

IAWA Journal, 2011, 32 (2), pp.221-232. ⟨10.1163/22941932-90000053⟩

Article dans une revue istex hal-02652523v1

Un système d’identification graphique des orchidées du Laos.

Pierre Bonnet , Daniel Barthélémy , Pierre Grard , André Schuiteman , Boukhaykhone Svengsuksa

Cahiers de la Société Française d’Orchidophilie, 2010, 7

Article dans une revue hal-03779226v1

Remarkable growth pattern in Chrysoglossum ornatum Blume and observations in related species

Pierre Bonnet , Daniel Barthélémy , André Schuiteman , Bouakhaykhone Svengsuksa

Comptes Rendus. Biologies, 2009, 332 (1), pp.15-24. ⟨10.1016/j.crvi.2008.09.011⟩

Article dans une revue istex halsde-00371159v1

Holcoglossum calcicola and Paphiopedilum barbigerum var. sulivongii: two attractive new orchids from the limestone hills of Laos

Pierre Bonnet , André Schuiteman

OrchideenJournal, 2009, 16 (1), pp.6-16

Article dans une revue halsde-00419514v1
Deposit thumbnail

L'identification des adventices assistée par ordinateur avec le système IDAO

Thomas Le Bourgeois , Pierre Bonnet , Claude Edelin , Pierre Grard , Juliana Prosperi et al.

Innovations Agronomiques, 2008, 3, pp.167-175. ⟨10.17180/jgtg-n109⟩

Article dans une revue halsde-00344614v1

An annotated checklist of the Orchidaceae of Laos

André Schuiteman , Pierre Bonnet , Bouakhaykhone Svengsuksa , Daniel Barthélémy

Nordic Journal of Botany, 2008, 26 (5-6), pp.257-316. ⟨10.1111/j.1756-1051.2008.00265.x⟩

Article dans une revue istex hal-02667645v1

CO Inhalation at Dose Corresponding to Tobacco Smoke Worsens Cardiac Remodeling after Experimental Myocardial Infarction in Rats

Alain Mirza , Véronique Eder , Gael y Rochefort , Jean-Marc Hyvelin , Marie Christine Machet et al.

Toxicological Sciences, 2005, 85 (2), pp.976-982. ⟨10.1093/toxsci/kfi139⟩

Article dans une revue hal-02475463v1
Deposit thumbnail

Overview of PlantCLEF 2025: Multi-species plant identification in vegetation quadrat images

Giulio Martellucci , Hervé Goeau , Pierre Bonnet , Fabrice Vinatier , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2025), Sep 2025, Madrid, Spain. pp.2942-2954

Communication dans un congrès hal-05528041v1
Deposit thumbnail

Overview of PlantCLEF 2025: Multi-Species Plant Identification in Vegetation Quadrat Images ⋆ Notebook for the LifeCLEF Lab at CLEF 2025

Giulio Martellucci , Hervé Goëau , Pierre Bonnet , Fabrice Vinatier , Alexis Joly

CLEF 2025 - Working Notes of the Conference and Labs of the Evaluation Forum, Sep 2025, Madrid, Spain. pp.2942-2954

Communication dans un congrès hal-05319328v1

LifeCLEF 2025 Teaser: Challenges on Species Presence Prediction and Identification, and Individual Animal Identification

Alexis Joly , Lukáš Picek , Stefan Kahl , Hervé Goëau , Lukáš Adam et al.

47. European Conference on Information Retrieval - ECIR 2025, Apr 2025, Lucca, Italy. pp.373-381, ⟨10.1007/978-3-031-88720-8_57⟩

Communication dans un congrès hal-05135815v1
Deposit thumbnail

Mapping biodiversity at very-high resolution in Europe

César Leblanc , Lukáš Picek , Benjamin Deneu , Pierre Bonnet , Maximilien Servajean et al.

CVPRW 2025 - IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops, IEEE; CVF, Jun 2025, Nashville, United States. pp.2340-2349, ⟨10.1109/CVPRW67362.2025.00221⟩

Communication dans un congrès hal-05457128v1
Deposit thumbnail

Overview of GeoLifeCLEF 2025: Plant Species Presence Prediction with Environmental and High-resolution Remote Sensing Data

Lukáš Picek , César Leblanc , Théo Larcher , Maximilien Servajean , Pierre Bonnet et al.

CLEF 2025 - Working Notes of the Conference and Labs of the Evaluation Forum, Sep 2025, Madrid, Spain. pp.2932-2941

Communication dans un congrès hal-05319448v1

Can Language Improve Visual Features For Distinguishing Unseen Plant Diseases?

Jerad Zherui Liaw , Abel Yu Hao Chai , Sue Han Lee , Pierre Bonnet , Alexis Joly

ICPR 2024 - 27th International Conference on Pattern Recognition, Dec 2024, Kolkata, India. pp.296-311, ⟨10.1007/978-3-031-78113-1_20⟩

Communication dans un congrès hal-04851648v1
Deposit thumbnail

Deep-Plant-Disease Dataset Is All You Need for Plant Disease Identification

Abel Yu Hao Chai , Kelly Li Zhen Jee , Sue Han Lee , Fei Siang Tay , Jules Vandeputte et al.

33rd ACM International Conference on Multimedia (ACM MM 2025), Association for Computing Machinery (ACM), Oct 2025, Dublin, Ireland. pp.12578-12584, ⟨10.1145/3746027.3758192⟩

Communication dans un congrès hal-05340010v1
Deposit thumbnail

GeoPlant: Spatial Plant Species Prediction Dataset

Lukáš Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard et al.

38. Conference on Neural Information Processing Systems, NeurIPS 2024, Dec 2024, Vancouver, Canada

Communication dans un congrès hal-04852083v1
Deposit thumbnail

Overview of GeoLifeCLEF 2024: Species Composition Prediction with High Spatial Resolution at Continental Scale using Remote Sensing

Lukáš Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard et al.

15. Conference and Labs of the Evaluation Forum (CLEF 2024), Sep 2024, Grenoble, France. pp.1966-1977

Communication dans un congrès hal-04720817v1
Deposit thumbnail

Pl@ntBERT: leveraging large language models to enhance vegetation classification through species composition analysis

César Leblanc , Pierre Bonnet , Maximilien Servajean , Alexis Joly

7. European Congress of Conservation Biology (ECCB 2024), SCB, Jun 2024, Bologna, Italy. pp.121

Communication dans un congrès hal-05182730v1
Deposit thumbnail

Overview of PlantCLEF 2024: multi-species plant identification in vegetation plot images

Hervé Goëau , Vincent Espitalier , Pierre Bonnet , Alexis Joly

15. Conference and Labs of the Evaluation Forum (CLEF 2024), Guglielmo Faggioli; Nicola Ferro; Petra Galuščáková; Alba García Seco de Herrera, Sep 2024, Grenoble, France. pp.1978-1988

Communication dans un congrès hal-04806900v1
Deposit thumbnail

Overview of LifeCLEF 2024 Teaser : Challenges on Species Distribution Prediction and Identification

Alexis Joly , Lukáš Picek , Stefan Kahl , Hervé Goëau , Vincent Espitalier et al.

ECIR 2024 - 46. European Conference on Information Retrieval, Mar 2024, Glasgow, United Kingdom. pp.19-27, ⟨10.1007/978-3-031-56072-9_3⟩

Communication dans un congrès hal-04667635v1
Deposit thumbnail

Cooperative learning of Pl@ntNet’s Artificial Intelligence algorithm using label aggregation

Tanguy Lefort , Antoine Affouard , Pierre Bonnet , Benjamin Charlier , Alexis Joly et al.

55. Journées de Statistique de la SFdS (JdS 2024), Société Française de Statistique, May 2024, Bordeaux, France. pp.35-44

Communication dans un congrès hal-04574223v1
Deposit thumbnail

Overview of LifeCLEF 2024: Challenges on Species Distribution Prediction and Identification

Alexis Joly , Lukáš Picek , Stefan Kahl , Hervé Goëau , Vincent Espitalier et al.

15. Conference and Labs of the Evaluation Forum (CLEF 2024), Sep 2024, Grenoble, France. pp.183-207, ⟨10.1007/978-3-031-71908-0_9⟩

Communication dans un congrès hal-04830385v1

Pairwise Feature Learning for Unseen Plant Disease Recognition

Abel Yu Hao Chai , Sue Han Lee , Fei Siang Tay , Yi Lung Then , Hervé Goëau et al.

ICIP 2023 - 30. IEEE International Conference on Image Processing, Thie Institute of Electrical and Electronics Engineers; Signal Processing Society, Oct 2023, Kuala Lumpur, Malaysia. pp.306-310, ⟨10.1109/ICIP49359.2023.10222401⟩

Communication dans un congrès hal-04214623v1
Deposit thumbnail

LifeCLEF 2023 teaser: Species Identification and Prediction Challenges

Alexis Joly , Stefan Kahl , Lukáš Picek , Christophe Botella , Diego Marcos et al.

ECIR 2023 - 45. European Conference on Information Retrieval, Jaap Kamps; Lorraine Goeuriot; Fabio Crestani; Maria Maistro; Hideo Joho; Brian Davis; Cathal Gurrin; Udo Kruschwitz; Annalina Caputo, Apr 2023, Dublin, Ireland. pp.568-576, ⟨10.1007/978-3-031-28241-6_65⟩

Communication dans un congrès hal-04204378v1
Deposit thumbnail

Overview of GeoLifeCLEF 2023: Species Composition Prediction with High Spatial Resolution at Continental Scale Using Remote Sensing

Christophe Botella , Benjamin Deneu , Diego Marcos , Maximilien Servajean , Théo Larcher et al.

24. Conference and Labs of the Evaluation Forum (CLEF-WN 2023), Sep 2023, Thessaloniki, Greece. pp.1954-1971

Communication dans un congrès hal-04322255v1
Deposit thumbnail

Overview of PlantCLEF 2023: Image-based Plant Identification at Global Scale

Hervé Goëau , Pierre Bonnet , Alexis Joly

24. Conference and Labs of the Evaluation Forum (CLEF-WN 2023), Mohammad Aliannejadi; Guglielmo Faggioli; Nicola Ferro; Michalis Vlachos, Sep 2023, Thessaloniki, Greece. pp.1972-1981

Communication dans un congrès hal-04345310v1

Overview of LifeCLEF 2022: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction

Alexis Joly , Hervé Goëau , Stefan Kahl , Lukáš Picek , Titouan Lorieul et al.

CLEF 2022 - 13. International Conference of the Cross-Language Evaluation Forum for European Languages, Sep 2022, Bologna, Italy. pp.257-285, ⟨10.1007/978-3-031-13643-6_19⟩

Communication dans un congrès hal-03807746v1
Deposit thumbnail

Overview of PlantCLEF 2022: Image-based plant identification at global scale

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF 2022 Working Notes - 23. Conference and Labs of the Evaluation Forum, Sep 2022, Bologna, Italy. pp.1916-1928

Communication dans un congrès lirmm-03793591v1
Deposit thumbnail

Species Distribution Modeling based on aerial images and environmental features with Convolutional Neural Networks

César Leblanc , Alexis Joly , Titouan Lorieul , Maximilien Servajean , Pierre Bonnet

CLEF 2022 Working Notes - 23. Conference and Labs of the Evaluation Forum, Guglielmo Faggioli; Nicola Ferro; Allan Hanbury; Martin Potthast, Sep 2022, Bologna, Italy. pp.2123-2150

Communication dans un congrès hal-03817452v1
Deposit thumbnail

LifeCLEF 2022 Teaser: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction

Alexis Joly , Hervé Goëau , Stefan Kahl , Lukáš Picek , Titouan Lorieul et al.

ECIR 2022 - 44. European Conference on Information Retrieval Research, Apr 2022, Stavanger, Norway. pp.390-399, ⟨10.1007/978-3-030-99739-7_49⟩

Communication dans un congrès hal-03641389v1
Deposit thumbnail

Integrating Citizen Observatories into School Environmental Education for Sustainability: Design and Evaluation of a Case Study Engaging Students with Pl@Ntnet and Odourcollect

Maria Daskolia , Matrona Pappa , Alexis Joly , Pierre Bonnet , Rosa Arias et al.

ICERI 2022 - 15. International Conference of Education, Research and Innovation, Nov 2022, Sevilla, Spain. pp.5479-5489, ⟨10.21125/iceri.2022.1345⟩

Communication dans un congrès hal-04613924v1
Deposit thumbnail

Overview of GeoLifeCLEF 2022: Predicting species presence from multi-modal remote sensing, bioclimatic and pedologic data

Titouan Lorieul , Elijah Cole , Benjamin Deneu , Maximilien Servajean , Pierre Bonnet et al.

CLEF 2022 Working Notes - 23. Conference and Labs of the Evaluation Forum, Sep 2022, Bologna, Italy. pp.1940-1956

Communication dans un congrès lirmm-03793595v1
Deposit thumbnail

Pl@ntNet-300K : a plant image dataset with high label ambiguity and along tailed distribution

Camille Garcin , Alexis Joly , Pierre Bonnet , Jean-Christophe Lombardo , Antoine Affouard et al.

Conference on Neural Information Processing Systems (NeurIPS 2021), Dec 2021, Virtual, France. pp.1-19

Communication dans un congrès hal-05181490v1
Deposit thumbnail

How Do Deep Convolutional SDM Trained on Satellite Images Unravel Vegetation Ecology ?

Benjamin Deneu , Alexis Joly , Pierre Bonnet , Maximilien Servajean , François Munoz

ICPR 2020 - 25th International Conference on Pattern Recognition, Alberto Del Bimbo; Rita Cucchiara; Stan Sclaroff; Giovanni Maria Farinella; Tao Mei; Marco Bertini; Hugo Jair Escalante; Roberto Vezzani, Jan 2021, Online, Italy. pp.148-158, ⟨10.1007/978-3-030-68780-9_15⟩

Communication dans un congrès hal-03167637v1
Deposit thumbnail

Pl@ntNet-300K: a plant image dataset with high label ambiguity and a long-tailed distribution

Camille Garcin , Alexis Joly , Pierre Bonnet , Jean-Christophe Lombardo , Antoine Affouard et al.

NeurIPS 2021 - 35th Conference on Neural Information Processing Systems, Dec 2021, Virtual Conference, France. ⟨10.5281/zenodo.5645731⟩

Communication dans un congrès hal-03474556v2
Deposit thumbnail

Overview of PlantCLEF 2021: cross-domain plant identification

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF 2021 Working Notes - 22nd Conference and Labs of the Evaluation Forum, Sep 2021, Bucarest, Romania. pp.1422-1436

Communication dans un congrès hal-03353469v1
Deposit thumbnail

Overview of LifeCLEF 2021: an evaluation of Machine-Learning based Species Identification and Species Distribution Prediction

Alexis Joly , Hervé Goëau , Stefan Kahl , Lukáš Picek , Titouan Lorieul et al.

CLEF 2021 - 12th International Conference of the Cross-Language Evaluation Forum for European Languages, Sep 2021, Online, France. pp.371-393, ⟨10.1007/978-3-030-85251-1_24⟩

Communication dans un congrès hal-03415990v1
Deposit thumbnail

WCSdb: a database of wild Coffea species

Romain Guyot , Perla Hamon , Emmanuel Couturon , Nathalie Raharimalala , Jean-Jacques Rakotomalala et al.

Conference of Association for the Science and Information on Coffee (ASIC 2021), ASIC, Jun 2021, Montpellier, France. pp.164

Communication dans un congrès hal-05179105v1

WeedElec: a robotic research platform for individual weed detection and selective electrical weeding

Florent Abdelghafour , Florian Rançon , Shiyu Liu , Julien Champ , Vincent de Rudnicki et al.

13. European Conference on Precision Agriculture (ECPA 2021), Jul 2021, Budapest, Hungary. pp.695-702, ⟨10.3920/978-90-8686-916-9_83⟩

Communication dans un congrès hal-03325689v1
Deposit thumbnail

Overview of GeoLifeCLEF 2021: Predicting species distribution from 2 million remote sensing images

Titouan Lorieul , Elijah Cole , Benjamin Deneu , Maximilien Servajean , Pierre Bonnet et al.

CLEF 2021 Working Notes - 22nd Conference and Labs of the Evaluation Forum, Guglielmo Faggioli; Nicola Ferro; Alexis Joly; Maria Maistro; Florina Piroi, Sep 2021, Bucarest, Romania. pp.1451-1462, ⟨10.1109/ICPR48806.2021.9412643⟩

Communication dans un congrès hal-03353487v1
Deposit thumbnail

LifeCLEF 2021 Teaser: Biodiversity identification and prediction challenges

Alexis Joly , Hervé Goeau , Stefan Kahl , Hervé Glotin , Elijah Cole et al.

LifeCLEF 2021, Mar 2021, s.l., Switzerland. pp.601-607, ⟨10.1007/978-3-030-72240-1_70⟩

Communication dans un congrès hal-05183025v1
Deposit thumbnail

Conditional Multi-Task learning for Plant Disease Identification

Sue Han Lee , Hervé Goëau , Pierre Bonnet , Alexis Joly

ICPR 2020 - 25th International Conference on Pattern Recognition, The International Association for Pattern Recognition (IAPR); ICPR2020 Organizing committee, Jan 2021, Milan, Italy. pp.3320-3327, ⟨10.1109/ICPR48806.2021.9412643⟩

Communication dans un congrès hal-03415972v1
Deposit thumbnail

Overview of LifeCLEF location-based species prediction task 2020 (GeoLifeCLEF)

Benjamin Deneu , Titouan Lorieul , Elijah Cole , Maximilien Servajean , Christophe Botella et al.

CLEF 2020 - Conference and Labs of the Evaluation Forum, Sep 2020, Thessaloniki, Greece

Communication dans un congrès hal-02989077v1
Deposit thumbnail

Overview of LifeCLEF 2020: A System-Oriented Evaluation of Automated Species Identification and Species Distribution Prediction

Alexis Joly , Hervé Goëau , Stefan Kahl , Benjamin Deneu , Willem-Pier Vellinga et al.

CLEF 2020 - 11. International Conference of the Cross-Language Evaluation Forum for European Languages, Sep 2020, Thessaloniki, Greece. pp.342-363, ⟨10.1007/978-3-030-58219-7_23⟩

Communication dans un congrès hal-02945382v1
Deposit thumbnail

LifeCLEF 2020 Teaser: Biodiversity Identification and Prediction Challenges

Alexis Joly , Hervé Goëau , Christophe Botella , Rafael Ruiz de Castaneda , Hervé Glotin et al.

ECIR 2020 - 42nd European Conference on IR Research on Advances in Information Retrieval, Apr 2020, Lisboa, Portugal. pp.542-549, ⟨10.1007/978-3-030-45442-5_70⟩

Communication dans un congrès hal-02873670v1
Deposit thumbnail

Overview of LifeCLEF Plant Identification task 2020

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF 2020 - Conference and Labs of the Evaluation Forum, The CLEF Initiative, Sep 2020, Thessaloniki, Greece

Communication dans un congrès hal-02980085v1
Deposit thumbnail

Basics of automated plant identification

Pierre Bonnet , Dawn Frame

Workshop "Automated Forest Restoration: Could Robots Revive Rain Forests?", S. Elliot; G. Gale; M. Robertson, Oct 2015, Chiang Mai, Thailand. pp.158-167

Communication dans un congrès hal-03156493v1
Deposit thumbnail

Overview of LifeCLEF plant identification task 2020

Hervé Goeau , Pierre Bonnet , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2020), Sep 2020, Thessaloniki, Greece. 15p

Communication dans un congrès hal-05177277v1
Deposit thumbnail

Domain adaptation in the context of herbarium collections. A submission to PlantCLEF 2020

Juan Villacis , Hervé Goeau , Pierre Bonnet , Alexis Joly , Erick Mata-Montero

Conference and Labs of the Evaluation Forum (CLEF 2020), Sep 2020, Thessaloniki, Greece. 15 p

Communication dans un congrès hal-05177278v1
Deposit thumbnail

Overview of GeoLifeCLEF 2019: Plant species prediction using environment and animal occurrences

Christophe Botella , Maximilien Servajean , Pierre Bonnet , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2019), Sep 2019, Lugano, Switzerland. 18 p

Communication dans un congrès hal-05177279v1
Deposit thumbnail

Overview of LifeCLEF 2019: Identification of Amazonian Plants, South &amp; North American Birds, and Niche Prediction

Alexis Joly , Hervé Goëau , Christophe Botella , Stefan Kahl , Maximilien Servajean et al.

CLEF 2019 - 10th International Conference of the Cross-Language Evaluation Forum for European Languages, Sep 2019, Lugano, Switzerland. pp.387-401, ⟨10.1007/978-3-030-28577-7_29⟩

Communication dans un congrès hal-02281455v1
Deposit thumbnail

Overview of LifeCLEF Plant Identification Task 2019: diving into Data Deficient Tropical Countries

Hervé Goëau , Pierre Bonnet , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2019), Linda Cappellato; Nicola Ferro; David E. Losada; Henning Müller, Sep 2019, Lugano, Switzerland

Communication dans un congrès hal-02283184v1
Deposit thumbnail

Overview of LifeCLEF plant identification task 2019: Diving into data deficient tropical countries

Hervé Goeau , Pierre Bonnet , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2019), Sep 2019, Lugano, Switzerland. 13 p

Communication dans un congrès hal-05177280v1
Deposit thumbnail

Overview of GeoLifeCLEF 2019: plant species prediction using environment and animal occurrences

Christophe Botella , Maximilien Servajean , Pierre Bonnet , Alexis Joly

Conference and Labs of the Evaluation Forum (CLEF 2019), Sep 2019, Lugano, Switzerland

Communication dans un congrès hal-02190170v1
Deposit thumbnail

LifeCLEF 2019: Biodiversity Identification and Prediction Challenges

Alexis Joly , Hervé Goëau , Christophe Botella , Stefan Kahl , Marion Poupard et al.

ECIR 2019 - 41st European Conference on IR Research, Apr 2019, Cologne, Germany. pp.275-282, ⟨10.1007/978-3-030-15719-7_37⟩

Communication dans un congrès hal-02273257v1
Deposit thumbnail

A new multi-species method to correct for sampling bias in presence only niche models, and its application to Pl@ntNet citizen science data in France

Christophe Botella , Alexis Joly , Pierre Bonnet , François Munoz , Pascal Monestiez

ESA 2019 - Annual Meeting of the Ecological Society of America, Aug 2019, Louisville, United States

Communication dans un congrès hal-03261122v1
Deposit thumbnail

Overview of GeoLifeCLEF 2018: location-based species recommendation

Christophe Botella , Pierre Bonnet , François Munoz , Pascal P. Monestiez , Alexis Joly

CLEF 2018 - Conference and Labs of the Evaluation Forum, Sep 2018, Avignon, France

Communication dans un congrès hal-01913238v1

Going deeper in the automated identification of Herbarium specimens

Pierre Bonnet , Alexis Joly , Hervé Goëau , Jean-Christophe Lombardo , Antoine Affouard et al.

Botany - Botanical Crossroads, Jun 2017, Forth Worth, TX, United States

Communication dans un congrès hal-01837387v1
Deposit thumbnail

Pl@ntNet app in the era of deep learning

Antoine Affouard , Hervé Goëau , Pierre Bonnet , Jean-Christophe Lombardo , Alexis Joly

ICLR: International Conference on Learning Representations, Apr 2017, Toulon, France

Communication dans un congrès hal-01629195v1
Deposit thumbnail

Plant identification based on noisy web data: the amazing performance of deep learning (LifeCLEF 2017)

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF: Conference and Labs of the Evaluation Forum, Sep 2017, Dublin, Ireland

Communication dans un congrès hal-01629183v1
Deposit thumbnail

Automated Herbarium Specimen Identification using Deep Learning

Jose Carranza-Rojas , Alexis Joly , Pierre Bonnet , Hervé Goëau , Erick Mata-Montero

TDWG 2017: Biodiversity Information Standards, Oct 2017, Ottawa, Canada. pp.e20302, ⟨10.3897/tdwgproceedings.1.20302⟩

Communication dans un congrès hal-01629142v1
Deposit thumbnail

LifeCLEF 2017 Lab Overview: Multimedia Species Identification Challenges

Alexis Joly , Hervé Goëau , Hervé Glotin , Concetto Spampinato , Pierre Bonnet et al.

CLEF: Conference and Labs of the Evaluation Forum, Sep 2017, Dublin, Ireland. pp.255-274, ⟨10.1007/978-3-319-65813-1_24⟩

Communication dans un congrès hal-01629191v1
Deposit thumbnail

Pl@ntNet -My Business

Alexis Joly , Pierre Bonnet , Antoine Affouard , Jean-Christophe Lombardo , Hervé Goëau

MM: Multimedia, Oct 2017, Mountain View, United States. pp.1-11

Communication dans un congrès hal-01638263v1
Deposit thumbnail

LifeCLEF 2016: Multimedia Life Species Identification Challenges

Alexis Joly , Hervé Goëau , Hervé Glotin , Concetto Spampinato , Pierre Bonnet et al.

CLEF 2016 - 7th International Conference of the Cross-Language Evaluation Forum for European Languages, Sep 2016, Évora, Portugal. pp.286-310, ⟨10.1007/978-3-319-44564-9_26⟩

Communication dans un congrès hal-01373781v1

An image-based Plant identification platform for thousands of species

Pierre Bonnet , Alexis Joly , Julien Champ , Hervé Goëau , Samuel Dufour-Kowalski et al.

ATBC: Association for Tropical Biology and Conservation, Jun 2016, Montpellier, France

Communication dans un congrès hal-01837355v1
Deposit thumbnail

Plant Identification in an Open-world (LifeCLEF 2016)

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF: Conference and Labs of the Evaluation Forum, Sep 2016, Évora, Portugal. pp.428-439

Communication dans un congrès hal-01373780v1
Deposit thumbnail

Crowdsourcing Biodiversity Monitoring: How Sharing your Photo Stream can Sustain our Planet

Alexis Joly , Hervé Goëau , Julien Champ , Samuel Dufour-Kowalski , Henning Müller et al.

MM 2016 - 24th International Conference on Multimedia, Oct 2016, Amsterdam, Netherlands. pp.958-967, ⟨10.1145/2964284.2976762⟩

Communication dans un congrès hal-01373762v1
Deposit thumbnail

Pl@ntNet, une plate-forme innovante d'agrégation et partage d'observations botaniques

Daniel Barthélémy , Nozha Boujemaa , Jean-François Molino , Alexis Joly , Hervé Goëau et al.

International Conference ‘Botanists of the Twenty-first Century’, UNESCO, Sep 2014, Paris, France. pp.191-197

Communication dans un congrès hal-01837361v1
Deposit thumbnail

LifeCLEF 2015: Multimedia Life Species Identification Challenges

Alexis Joly , Hervé Goëau , Hervé Glotin , Concetto Spampinato , Pierre Bonnet et al.

CLEF: Cross-Language Evaluation Forum, Université de Toulouse. FRA., Sep 2015, Toulouse, France. pp.462-483, ⟨10.1007/978-3-319-24027-5_46⟩

Communication dans un congrès hal-01182782v1
Deposit thumbnail

LifeCLEF Plant Identification Task 2015

Hervé Goëau , Pierre Bonnet , Alexis Joly

CLEF: Conference and Labs of the Evaluation Forum, Sep 2015, Toulouse, France

Communication dans un congrès hal-01182795v1
Deposit thumbnail

LifeCLEF: Multimedia Life Species Identification

Alexis Joly , Henning Müller , Hervé Goëau , Hervé Glotin , Concetto Spampinato et al.

EMR: Environmental Multimedia Retrieval, Apr 2014, Glasgow, United Kingdom. pp.7-13

Communication dans un congrès hal-01088812v1
Deposit thumbnail

Pl@ntNet Mobile 2014: Android port and new features

Hervé Goëau , Pierre Bonnet , Alexis Joly , Antoine Affouard , Vera Bakić et al.

ICMR: International Conference on Multimedia Retrieval, Apr 2014, Glasgow, United Kingdom. pp.527-530, ⟨10.1145/2578726.2582618⟩

Communication dans un congrès hal-01088819v1

LifeCLEF 2014: Multimedia Life Species Identification Challenges

Alexis Joly , Hervé Goëau , Hervé Glotin , Concetto Spampinato , Pierre Bonnet et al.

CLEF: Cross-Language Evaluation Forum, Sep 2014, Sheffield, United Kingdom. pp.229-249, ⟨10.1007/978-3-319-11382-1_20⟩

Communication dans un congrès hal-01075770v1
Deposit thumbnail

PlantNet Participation at LifeCLEF2014 Plant Identification Task

Hervé Goëau , Alexis Joly , Itheri Yahiaoui , Vera Bakić , Anne Verroust-Blondet et al.

CLEF: Conference and Labs of the Evaluation Forum, Sep 2014, Sheffield, United Kingdom. pp.724-737

Communication dans un congrès halsde-01064569v1
Deposit thumbnail

LifeCLEF Plant Identification Task 2014

Hervé Goëau , Alexis Joly , Pierre Bonnet , Souheil Selmi , Jean-François Molino et al.

CLEF: Conference and Labs of the Evaluation Forum, University of Scheffield. GBR., Sep 2014, Sheffield, United Kingdom. pp.598-615

Communication dans un congrès halsde-01064599v1
Deposit thumbnail

Fine-grained Visual Faceted Search

Julien Champ , Alexis Joly , Pierre Bonnet

MM 2014 - 22nd ACM International Conference on Multimedia, Nov 2014, Orlando, United States. pp.721-722, ⟨10.1145/2647868.2654875⟩

Communication dans un congrès hal-01088822v1
Deposit thumbnail

Collaborative validation of visual data through the Pl@ntNet identification system

Samuel Dufour-Kowalski , Jeremy Salinier , Aurelien Peronnet , Jennifer Carré , Jean-Pascal Milcent et al.

TDWG 2013 - Annual Conference, Oct 2013, Florence, Italy

Communication dans un congrès hal-03885113v1
Deposit thumbnail

The ImageCLEF 2013 Plant Identification Task

Hervé Goëau , Pierre Bonnet , Alexis Joly , Vera Bakić , Daniel Barthélémy et al.

CLEF, Sep 2013, Valencia, Spain

Communication dans un congrès hal-00960929v1

Imageclef 2013: the vision, the data and the open challenges

Caputo Barbara , Muller Henning , Thomee Bart , Villegas Mauricio , Roberto Paredes et al.

CLEF 2013 - 4th Conference and Labs of the Evaluation Forum : Information Access Evaluation meets Multilinguality, Multimodality, and Visualization, Sep 2013, Valencia, Spain. pp.250-268, ⟨10.1007/978-3-642-40802-1_26⟩

Communication dans un congrès hal-00908881v1

The Imageclef Plant Identification Task 2013

Alexis Joly , Hervé Goëau , Pierre Bonnet , Vera Bakić , Jean-François Molino et al.

MAED: Multimedia Analysis for Ecological Data, Oct 2013, Barcelone, Spain. pp.23-28, ⟨10.1145/2509896.2509902⟩

Communication dans un congrès hal-00908934v1
Deposit thumbnail

Pl@ntNet Mobile App

Hervé Goëau , Pierre Bonnet , Alexis Joly , Vera Bakić , Julien Barbe et al.

MM 2013 - 21st ACM International Conference on Multimedia, Oct 2013, Barcelona, Spain. pp.423-424, ⟨10.1145/2502081.2502251⟩

Communication dans un congrès hal-00908910v1
Deposit thumbnail

The ImageCLEF 2012 Plant Identification Task

Hervé Goëau , Pierre Bonnet , Alexis Joly , Itheri Yahiaoui , Daniel Barthélémy et al.

CLEF'2012: Conference and Labs of the Evaluation Forum, Sep 2012, Rome, Italy

Communication dans un congrès hal-00960918v1

Multi-Organ Plant Identification

Hervé Goëau , Pierre Bonnet , Julien Barbe , Vera Bakić , Alexis Joly et al.

ACM International Workshop on Multimedia Analysis for Ecological Data, Oct 2012, Nara, Japan. pp.41--44

Communication dans un congrès hal-00739724v1

Values, norms and practices in Plant biodiversity-based research and innovation commons

Sélim Louafi , Elizabeth Arnaud , Daniel Barthélémy , Pierre Bonnet , Jean-Louis Noyer et al.

First Thematic Conference on "the Knowledge Commons" (2012 IASC), 12-14th september 2012, Louvain-la-neuve, International Association for the Study of the Commons, Sep 2012, Louvain-la-neuve, Belgium

Communication dans un congrès hal-03776872v1

The Pl@ntnet project: plant computational identification and collaborative information system

Daniel Barthélémy , Nozha Boujemaa , Daniel Mathieu , Jean-François Molino , Alexis Joly et al.

IBC 2011 - XVIII International Botanical congress, Jul 2011, Melbourne, Australia

Communication dans un congrès hal-02810776v1
Deposit thumbnail

Visual-based plant species identification from crowdsourced data

Hervé Goëau , Alexis Joly , Souheil Selmi , Pierre Bonnet , Elise Mouysset et al.

MM'11 - ACM Multimedia 2011, Nov 2011, Scottsdale, United States. pp.0-0, ⟨10.1145/2072298.2072472⟩

Communication dans un congrès hal-00642236v1

Vegetative features and plant architecture of orchids of Laos: their use in plant identification and their relation with phylogeny

Pierre Bonnet , Daniel Barthélémy

20th WOC 2011, Nov 2011, Singapore, Singapore

Communication dans un congrès hal-02804665v1
Deposit thumbnail

The ImageCLEF 2011 plant images classification task

Hervé Goëau , Pierre Bonnet , Alexis Joly , Nozha Boujemaa , Daniel Barthélémy et al.

ImageCLEF 2011, Sep 2011, Amsterdam, Netherlands

Communication dans un congrès hal-00642197v1

Pl@ntNote v2 - a new generation of software for storage and exchange of heterogeneous botanical data

Benjamin Liens , Samuel Dufour-Kowalski , Philippe Birnbaum , Pierre Bonnet , Daniel Barthélémy et al.

TDWG 2011 Annual Conference, Oct 2011, New Orleans, United States

Communication dans un congrès hal-02806209v1

The Pl@ntNet project: Plant Computational Identification and Collaborative Information System

Daniel Barthélémy , Nozha Boujemaa , Daniel Mathieu , Jean-François Molino , Alexis Joly et al.

Biosystematics 2011 - Digital identification methods in the digital age - morphological and molecular, computer-aided and fully automated, research and citizen science, Feb 2011, Berlin, Germany

Communication dans un congrès hal-02808663v1
Deposit thumbnail

The CLEF 2011 Plant Images Classification Task

Hervé Goëau , Pierre Bonnet , Alexis Joly , Nozha Boujemaa , Daniel Barthélémy et al.

ImageCLEF 2011, Vivien Petras; Pamela Forner; Paul Clough; Nicola Ferro, Sep 2011, Amsterdam, Netherlands

Communication dans un congrès hal-03778869v1
Deposit thumbnail

Participation of INRIA & Pl@ntNet to ImageCLEF 2011 plant images classification task

Hervé Goëau , Alexis Joly , Itheri Yahiaoui , Pierre Bonnet , Elise Mouysset

ImageCLEF 2011, Sep 2011, Amsterdam, Netherlands. pp.0-0

Communication dans un congrès hal-00642239v1

Iterative Search with Local Visual Features for Computer Assisted Plant Identification

Wajih Ouertani , Pierre Bonnet , Michel Crucianu , Nozha Boujemaa , Daniel Barthélémy

Tools for identifying biodiversity : progress and problems : proceedings of the international congress, Muséum national d'histoire naturelle (Paris), Sep 2010, Paris, France. pp.237-242

Communication dans un congrès hal-03780241v1

El proyecto Pl@ntNet : Una sistema de información colaborativa y de identificación de plantas

Pierre Bonnet , Jean-François Molino , Daniel Barthélémy , Nozha Boujemaa , Daniel Mathieu et al.

Workshop International "Origine de la biodiversité et utilisations innovantes de la diversité moléculaire et génétique", Nov 2010, Iquitos, Perú

Communication dans un congrès hal-02821455v1

2010. Pl@ntNet, une plateforme libre et collaborative d’information et d’identification des plantes.

Daniel Barthélémy , Violette Roche , Nozha Boujemaa , Daniel Mathieu , Jean-François Molino et al.

La biodiversité dans les arboretums. Savoir la gérer et la valoriser, Apr 2010, Antibes, France

Communication dans un congrès hal-02814796v1

Pl@ntNet, une plateforme libre collaborative d'information et d'identification des plantes

Pierre Bonnet , Jean-François Molino

La biodiversité dans les arboretums. Savoir la gérer et la valoriser, Groupe d'Etude de l'Arbre (GEA). FRA., Apr 2010, Antibes, France

Communication dans un congrès hal-02823479v1

The European Union ORCHIS project and its effects and applications on the knowledge and regulation of trade and conservation of Lao Orchids

Pierre Bonnet , Daniel Barthélémy , André Schuiteman , Bouakhaykhone Svengsuksa

The annual Meeting of the Association for tropical Biology and Conservation (ATBC 2009), Feb 2009, Chang Mai, Thailand

Communication dans un congrès hal-02818646v1

The PlantNet project: Plant Computational Identification and Collaborative Information System

Daniel Barthélémy , Nozha Boujemaa , Daniel Mathieu , Jean-François Molino , Pierre Bonnet et al.

First meeting of Biosyst EU 2009, Seventh Biennial Conference of the Systematics Association, Aug 2009, Leiden, Netherlands

Communication dans un congrès hal-02814250v1

A graphical tool for computer-assisted plant identification

Pierre Grard , Pierre Bonnet , Juliana Prosperi , Thomas Le Bourgeois , Claude Edelin et al.

Taxonomic Database Working Group, TDWG 2009 Annual Conference, Nov 2009, Montpellier, France. pp.485

Communication dans un congrès hal-02814255v1

A graphical system for computer-assisted plant identification

Pierre Grard , Pierre Bonnet , Juliana Prosperi , Thomas Le Bourgeois , Claude Edelin et al.

Taxonomic Database Working Group, TDWG 2009 Annual Conference, Nov 2009, Montpellier, France. pp.456

Communication dans un congrès hal-02813988v1

La rizière et les mauvaises herbes

Juliana Prosperi , Pierre Grard , Pierre Bonnet , Claude Edelin , Jeanne Millet

International Seminar " Innovation agricole et agroalimentaire en Asie du Sud-Est : dialogue entre chercheurs-enseignants et praticiens-utilisateurs "., Institut de Technologie du Cambodge (ITC). Phnom Penh, KHM, Oct 2008, Phnom Penh, Cambodge

Communication dans un congrès hal-02814299v1

IDAO Identification assisted by computer

Thomas Le Bourgeois , Pierre Bonnet , M. Couteau , Pierre Grard , Claude Edelin et al.

IUCN Worl conservation Congress Worshop "Safegarding biodiversity and livehood from biological invasion: goal sharing of experience and information as a key step to effective management at local level", International Union for Conservation of Nature (IUCN). Gland, INT., Oct 2008, Barcelona, Spain

Communication dans un congrès hal-02814806v1

La rizière et les mauvaises herbes

Juliana Prosperi , Pierre Grard , Pierre Bonnet , Claude Edelin , Jérôme Millet

Innovation agricole et agroalimentaire en Asie du Sud-Est : dialogue entre chercheurs-enseignants et praticiens-utilisateurs. CIDEFA, AUF., Oct 2008, Phnom Penh, Cambodia

Communication dans un congrès hal-05093958v1
Deposit thumbnail

Pl@ntNet, ten years of automatic plant identification and monitoring

Alexis Joly , Antoine Affouard , Mathias Chouet , Benjamin Deneu , Joaquim Estopinan et al.

IUCN - Congrès mondial de la nature, Sep 2021, Marseille, France.

Poster de conférence hal-03343235v1

Potential and limits of automated plant identification based on visual data, feedbacks from the development of Pl@ntNet initiative

Pierre Bonnet , Alexis Joly , Hervé Goëau , Jean-Christophe Lombardo , Antoine Affouard et al.

Botany 2017, Jun 2017, Forth Worth, TX, United States. , 2017

Poster de conférence hal-01837383v1
Deposit thumbnail

Biodiversity Informatics: An interactive computer- aided identification and knowledge base on tree species of Lao PDR

Juliana Prosperi , Vichith Lamxay , B.R. Ramesh , N Ayyappan , Sarah Cardinal et al.

Quels botanistes pour le 21e siècle ? Métiers, enjeux, opportunités, Sep 2014, Paris, France. , 1 p., 2014

Poster de conférence hal-01078007v1
Deposit thumbnail

DataManager, un système novateur de gestion et d’échange de données botaniques distribuées

Samuel Dufour-Kowalski , Mathias Chouet , Antoine Affouard , Jean-Pascal Milcent , Grégoire Duché et al.

Quels botanistes pour le 21e siècle ? Métiers, enjeux, opportunités, Sep 2014, Paris, France. , 2014

Poster de conférence hal-01074648v1
Deposit thumbnail

Pl@ntWood: A computer-assisted identification tool for 110 species of Amazon trees based on wood anatomy

Carolina Sarmiento , Christine Heinz , Pierre Détienne , Pierre Bonnet

Taxonomic Database Working Group, TDWG 2009 Annual Conference, 2009, Montpellier, France. 2009

Poster de conférence hal-02820882v1

Advances in taxonomic identification by image recognition, with the generic content-based image retrieval IKONA

Mathieu Coutaud , Pierre Bonnet , Alexis Joly , Raffi Enficiaud , Nozha Boujemaa et al.

e-Biosphere 09 International Conference on Biodiversity Informatics, Jun 2009, London, United Kingdom. 2009

Poster de conférence hal-02814506v1

Pl@ntWeeds, a collaborative weeds identification and information platform

Daniel Barthélémy , Nozha Boujemaa , Daniel Mathieu , Jean-François Molino , Pierre Bonnet et al.

Science Forum 2009, Jun 2009, Wageningen, Netherlands. 2009

Poster de conférence hal-02816059v1
Deposit thumbnail

IDAO: A graphical tool for computer-assisted plant identification

Pierre Bonnet , Pierre Grard , Claude Edelin , Thomas Le Bourgeois , Frédéric Theveny et al.

e-Biosphere 09 International Conference on Biodiversity Informatics, Jun 2009, London, United Kingdom. 2009

Poster de conférence hal-02822849v1

Overview of LifeCLEF 2025: Challenges on Species Presence Prediction and Identification, and Individual Animal Identification

Lukáš Picek , Stefan Kahl , Hervé Goëau , Lukáš Adam , Théo Larcher et al.

Experimental IR Meets Multilinguality, Multimodality, and Interaction: 16th International Conference of the CLEF Association, CLEF 2025, 16089, Springer Nature Switzerland, pp.338-362, 2026, Lecture Notes in Computer Science, 978-3-032-04353-5. ⟨10.1007/978-3-032-04354-2_19⟩

Chapitre d'ouvrage hal-05408591v1
Deposit thumbnail

Citizen scientists contribution to monitor Asian biodiversity: a case study on flora of Peninsula Malaysia

Sue Han Lee , Hervé Goëau , Alexis Joly , Simying Ong , Yuen Peng Loh et al.

Julien Claude; Noppadon Kitana. On the Edge of the Sixth Mass Extinction in Biodiversity Hotspots: Facts, needs, solutions and opportunities in Thailand and adjacent countries, CU press, pp.139-160, 2024

Chapitre d'ouvrage hal-04970397v1

New Automatic Identification Tools: An Aid for Botanists and Nature Managers ?

François Munoz , Pierre Bonnet

Emilie Kohlmann. Linking with Nature in the Digital Age: Volume 1 - Communication, Environment, Science and Society SET, 1, ISTE; Wiley, pp.161-175, 2024, 9781786308580. ⟨10.1002/9781394297580.ch9⟩

Chapitre d'ouvrage hal-04643105v1
Deposit thumbnail

Biodiversity Information Retrieval Through Large Scale Content-Based Identification: A Long-Term Evaluation

Alexis Joly , Hervé Goëau , Hervé Glotin , Concetto Spampinato , Pierre Bonnet et al.

Nicola Ferro; Carol Peters. Information Retrieval Evaluation in a Changing World: Lessons Learned from 20 Years of CLEF, 41, Springer, pp.389-413, 2019, The Information Retrieval Series, 978-3-030-22948-1. ⟨10.1007/978-3-030-22948-1_16⟩

Chapitre d'ouvrage hal-02273280v1
Deposit thumbnail

A deep learning approach to Species Distribution Modelling

Christophe Botella , Alexis Joly , Pierre Bonnet , Pascal Monestiez , François Munoz

Alexis Joly; Stefanos Vrochidis; Kostas Karatzas; Ari Karppinen; Pierre Bonnet. Multimedia Tools and Applications for Environmental & Biodiversity Informatics, Springer, pp.169-199, 2018, Multimedia Systems and Applications Series, 978-3-319-76444-3. ⟨10.1007/978-3-319-76445-0_10⟩

Chapitre d'ouvrage hal-01834227v1

Multimedia Tools and Applications for Environmental & Biodiversity Informatics - Preface

Alexis Joly , Pierre Bonnet , Stefanos Vrochidis , Kostas Karatzas , Ari Karppinen

Joly A.; Vrochidis S.; Karatzas K.; Karppinen A.; Bonnet P. Multimedia Tools and Applications for Environmental & Biodiversity Informatics, Springer, pp.1-7, 2018, Multimedia Systems and Applications (MMSA), 978-3-319-76445-0; 978-3-319-76444-3. ⟨10.1007/978-3-319-76445-0_1⟩

Chapitre d'ouvrage hal-02786879v1
Deposit thumbnail

Plant Identification: Experts vs. Machines in the Era of Deep Learning

Pierre Bonnet , Hervé Goëau , Siang Thye Hang , Mario Lasseck , Milaň Sulc et al.

Multimedia Tools and Applications for Environmental & Biodiversity Informatics, Chapter 8, Editions Springer, pp.131-149, 2018, Multimedia Systems and Applications Series, 978-3-319-76444-3. ⟨10.1007/978-3-319-76445-0_8⟩

Chapitre d'ouvrage hal-01913277v1
Deposit thumbnail

Automated identification of herbarium specimens at different taxonomic levels

Jose Carranza-Rojas , Alexis Joly , Hervé Goëau , Erick Mata-Montero , Pierre Bonnet

Multimedia Tools and Applications for Environmental & Biodiversity Informatics, Multimedia Systems and Applications, Editions Springer, pp.151-167, 2018, Multimedia Systems and Applications Series, 978-3-319-76444-3. ⟨10.1007/978-3-319-76445-0_9⟩

Chapitre d'ouvrage hal-01913272v1