Phil M. Oger Phil Oger @ HAL

Identifiants chercheurs

IdHAL :

poger

ORCID :

0000-0001-6298-6870

IdRef :

167411993

ResearcherID :

http://www.researcherid.com/rid/C-8138-2012

Présentation

Education

2007 Habilitation à Diriger des Recherches de l'Université Claude Bernard Lyon 1

1995 PhD summa cum laude en Phytopathologie (Université Paris X1-Orsay)

1991 DEA en Phytopathologie (Université Paris X1-Orsay/INAP-G)

1991 Ingénieur agronome (Institut National Agronomique Paris-Grignon)

Expérience professionelle

2016-present DR CNRS, Adaptation aux Milieux Extrêmes, UMR 5240, INSA Lyon

2000-2015 CR puis DR CNRS, Géomicrobiology, Lab. de Géologie de Lyon, ENS de Lyon

1999-2000 Post-Doc, Institut des Sciences du Végétal, CNRS, Gif-sur-Yvette

1996-1999 Post-Doc, University of Illinois, Urbana-Champaign (USA)

Enseignement

2014 - auj.

2005 - 2014

1992 - 1995

Publications

Article dans une revue (161)

Hydrostatic pressure-enabled transformation in Natronomonas pharaonis: breaking barriers in haloalkaliphilic Archaea genetics Emma Bonnaud,Philippe M Oger,Mathieu Orzalesi,Yoann Louis Frontiers in Microbiology, 2026, 17, pp.1774663. ⟨10.3389/fmicb.2026.1774663⟩ Article dans une revue hal-05592715v1
Stability and Adaptation of Proteins, Membranes and Cells to Extreme Temperature and Pressure J. Peters,J.G. Loricco,M. Saracco,A. Caliò,Philippe Oger Journal of Molecular Biology, 2025, pp.169477. ⟨10.1016/j.jmb.2025.169477⟩ Article dans une revue hal-05385671v1
Complete genomes of Australian Bradyrhizobium genospecies A and P representative strains Christine Oger-Desfeux,Jérôme Briolay,Philippe M. Oger,Bénédicte Lafay Microbiology Resource Announcements, 2025, 14 (7), pp.e00490-25. ⟨10.1128/mra.00490-25⟩ Article dans une revue hal-05385617v1
Functional profiles and organochlorine degradation potential in microbial communities of tropical epilithic biofilms: a case study in Guadeloupe (Lesser Antilles) Anthony Gouyer,Dominique Monti,Sonia Mion,Philippe Oger,Olivier Gros Canadian Journal of Microbiology, 2025, 71, pp.1-13. ⟨10.1139/cjm-2025-0074⟩ Article dans une revue hal-05278443v1
Genomic characterisation of novel extremophile lineages from the thalassohaline lake Dziani Dzaha expands the metabolic repertoire of the PVC superphylum Adrien Vigneron,Lilian Cloarec,Céline Brochier-Armanet,Jean Pierre Flandrois,Marc Troussellieret al. Environmental Microbiome, 2025, 20 (1), pp.48. ⟨10.1186/s40793-025-00699-1⟩ Article dans une revue hal-05065064v1
Bilayer-Forming Lipids Enhance Archaeal Monolayer Membrane Stability Margot Saracco,Philippe Schaeffer,Maxime Tourte,Sonja-Verena Albers,Yoann Louiset al. International Journal of Molecular Sciences, 2025, 26 (7), pp.3045. ⟨10.3390/ijms26073045⟩ Article dans une revue hal-05007477v1
Acidification-based mineral weathering mechanism involves a glucose/methanol/choline oxidoreductase in Caballeronia mineralivorans PML1(12) Cintia Blanco Nouche,Laura Picard,Carine Cochet,Cédric Paris,Philippe Ogeret al. Applied and Environmental Microbiology, 2024, 90 (12), ⟨10.1128/aem.01221-24⟩ Article dans une revue hal-04771098v1
Insights in extreme microbiology Andreas Teske,Phil M. Oger Frontiers in Microbiology, 2024, 15, pp.1473691. ⟨10.3389/fmicb.2024.1473691⟩ Article dans une revue hal-04677878v1
Lineage-dependent partitioning of activities in chemoclines defines Woesearchaeota ecotypes in an extreme aquatic ecosystem Lilian A Cloarec,Thomas Bacchetta,Maxime Bruto,Christophe Leboulanger,Vincent Grossiet al. Microbiome, 2024, 12 (1), pp.249. ⟨10.1186/s40168-024-01956-0⟩ Article dans une revue hal-04811121v1
New insights into thermostable iron-containing/activated alcohol dehydrogenases from hyperthermophiles Yushan Lin,Youcheng Yin,Phil M. Oger,Yong Gong,Xiaojian Zhouet al. International Journal of Biological Macromolecules, 2024, 275, pp.133707. ⟨10.1016/j.ijbiomac.2024.133707⟩ Article dans une revue hal-04654920v1
Biochemical characterization and mutational analysis of the NurA protein from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Guangyu Ma,Tan Lin,Peng Cao,Phil M. Oger,Kunming Donget al. Research in Microbiology, 2024, pp.104189. ⟨10.1016/j.resmic.2024.104189⟩ Article dans une revue hal-04480971v1
Impact of Isotopic Exchange on Hydrated Protein Dynamics Revealed by Polarized Neutron Scattering Agathe Nidriche,Martine Moulin,Phil M. Oger,J. Ross Stewart,Lucile Mangin-Throet al. PRX Life, 2024, 2 (1), pp.013005. ⟨10.1103/prxlife.2.013005⟩ Article dans une revue hal-04481004v1
Transcriptomic insights into the dominance of two phototrophs throughout the water column of a tropical hypersaline-alkaline crater lake (Dziani Dzaha, Mayotte) Sébastien Duperron,Sébastien Halary,Jean-Pierre Bouly,Théotime Roussel,Mylène Hugoniet al. Frontiers in Microbiology, 2024, 15, pp.1368523. ⟨10.3389/fmicb.2024.1368523⟩ Article dans une revue hal-04582518v1
Haloarchaea as Promising Chassis to Green Chemistry Emma Bonnaud,Phil M. Oger,Avigaël Ohayon,Yoann Louis Microorganisms, 2024, 12 (8), pp.1738. ⟨10.3390/microorganisms12081738⟩ Article dans une revue (article de synthèse) hal-04677423v1
Seismic events as potential drivers of the microbial community structure and evolution in a paleo-ocean analog Adrien Vigneron,Lilian Cloarec,Hélène Agogué,Cécile Bernard,Sébastien Duperronet al. Communications Earth & Environment, 2024, 5 (1), pp.504. ⟨10.1038/s43247-024-01615-0⟩ Article dans une revue hal-04709168v1
Effects of Crowding and Cosolutes on Biomolecular Function at Extreme Environmental Conditions Judith Peters,Rosario Oliva,Antonino Caliò,Phil M. Oger,Roland Winter Chemical Reviews, 2023, 123 (23), pp.13441-13488. ⟨10.1021/acs.chemrev.3c00432⟩ Article dans une revue (article de synthèse) hal-04296968v1
Bradyrhizobium commune sp. nov., isolated from nodules of a wide range of native legumes across the Australian continent Bénédicte Lafay,Elina Coquery,Phil M. Oger International Journal of Systematic and Evolutionary Microbiology, 2023, 73 (7), pp.005971. ⟨10.1099/ijsem.0.005971⟩ Article dans une revue hal-04191550v1
Biochemical and mutational studies of an endonuclease V from the hyperthermophilic crenarchaeon Sulfolobus islandicus REY15A Youcheng Yin,Jingru Shi,Likui Zhang,Qing Liu,Yong Gonget al. World Journal of Microbiology and Biotechnology, 2023, 39 (4), pp.90. ⟨10.1007/s11274-023-03526-2⟩ Article dans une revue hal-04297274v1
Phytoplanktonic species in the haloalkaline Lake Dziani Dzaha select their archaeal microbiome Maxime Bruto,Phil M. Oger,Patrice Got,Cécile Bernard,Delphine Melayahet al. Molecular Ecology, 2023, 32 (24), pp.6824-6838. ⟨10.1111/mec.17179⟩ Article dans une revue hal-04277813v1
Biochemical characterization and mutational studies of endonuclease Q from the hyperthermophilic euryarchaeon Thermococcus gammatolerans Mai Wu,Guangyu Ma,Yushan Lin,Phil M. Oger,Peng Caoet al. DNA Repair, 2023, 126, pp.103490. ⟨10.1016/j.dnarep.2023.103490⟩ Article dans une revue hal-04297134v1
Incorporation and localisation of alkanes in a protomembrane model Loreto Misuraca,Josephine Loricco,Phil M. Oger,Judith Peters,Bruno Demé Biochimica et Biophysica Acta:Biomembranes, 2023, 1865 (3), pp.184119. ⟨10.1016/j.bbamem.2023.184119⟩ Article dans une revue hal-04297309v1
Thermostable DNA ligases from hyperthermophiles in biotechnology Jingru Shi,Phil M. Oger,Peng Cao,Likui Zhang Frontiers in Microbiology, 2023, 14, ⟨10.3389/fmicb.2023.1198784⟩ Article dans une revue hal-04297154v1
The non-ribosomal peptide synthetase-independent siderophore (NIS) rhizobactin produced by Caballeronia mineralivorans PML1(12) confers the ability to weather minerals Cintia Blanco Nouche,Cédric Paris,Tiphaine Dhalleine,Phil M. Oger,Marie-Pierre Turpaultet al. Applied and Environmental Microbiology, 2023, 89 (10), pp.0045323. ⟨10.1128/aem.00453-23⟩ Article dans une revue hal-04297012v1
Molecular Rearrangements in Protomembrane Models Probed by Laurdan Fluorescence Loreto Misuraca,Roland Winter,Bruno Demé,Phil M. Oger,Judith Peters Membranes, 2023, 13 (4), pp.386. ⟨10.3390/membranes13040386⟩ Article dans une revue hal-04297292v1
Alkanes as Membrane Regulators of the Response of Early Membranes to Extreme Temperatures Loreto Misuraca,Antonino Caliò,Josephine Loricco,Ingo Hoffmann,Roland Winteret al. Life, 2022, 12 (3), pp.445. ⟨10.3390/life12030445⟩ Article dans une revue hal-03930744v1
Biochemical characterization and mutational analysis of a novel flap endonuclease 1 from Thermococcus barophilus Ch5 Tan Lin,Likui Zhang,Donghao Jiang,Leilei Wu,Kaige Chenet al. International Journal of Biochemistry and Cell Biology, 2022, 143, pp.106154. ⟨10.1016/j.biocel.2021.106154⟩ Article dans une revue hal-03722823v1
Synthesis of phospholipids under plausible prebiotic conditions and analogies with phospholipid biochemistry or origin of life studies Michele Fiore,Carolina Chieffo,Augustin Lopez,Dimitri Fayolle,Johal Ruizet al. Astrobiology, In press, ⟨10.1089/ast.2021.0059⟩ Article dans une revue hal-03591985v1
Unravelling the Adaptation Mechanisms to High Pressure in Proteins Antonino Caliò,Cécile Dubois,Stéphane Fontanay,Michael Marek Koza,François Hohet al. International Journal of Molecular Sciences, 2022, Feature Papers in Molecular Biophysics, 23 (15), pp.8469. ⟨10.3390/ijms23158469⟩ Article dans une revue hal-03744880v1
The Exploration of the Thermococcus barophilus Lipidome Reveals the Widest Variety of Phosphoglycolipids in Thermococcales Maxime Tourte,Sarah Coffinet,Lars Wörmer,Julius S Lipp,Kai-Uwe Hinrichset al. Frontiers in Microbiology, 2022, 13, pp.869479. ⟨10.3389/fmicb.2022.869479⟩ Article dans une revue hal-03722871v1
High temperature molecular motions within a model protomembrane architecture Loreto Misuraca,Tatsuhito Matsuo,Aline Cisse,Josephine Loricco,Antonino Caliòet al. Physical Chemistry Chemical Physics, 2022, 24, pp.15083-15090. ⟨10.1039/D2CP01205G⟩ Article dans une revue hal-03722910v1
Biochemical characterization and mutational analysis of a mismatch glycosylase from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Lei Wang,Tan Lin,Phil M. Oger,Yong Gong,Likui Zhang DNA Repair, 2022, 114, pp.103321. ⟨10.1016/j.dnarep.2022.103321⟩ Article dans une revue hal-03722864v1
Genomic and transcriptomic characterization of the Collimonas quorum sensing genes and regulon Stephane Uroz,Océane Geisler,Laure Fauchery,Raphaël Lami,Alice M.S. Rodrigueset al. FEMS Microbiology Ecology, 2022, 98 (11), ⟨10.1093/femsec/fiac100⟩ Article dans une revue hal-03915632v1
Membrane adaptation in the hyperthermophilic archaeon Pyrococcus furiosus relies upon a novel strategy involving glycerol monoalkyl glycerol tetraether lipids Maxime Tourte,Philippe Schaeffer,Vincent Grossi,Phil M. Oger Environmental Microbiology, 2022, 24 (4), pp.2029-2046. ⟨10.1111/1462-2920.15923⟩ Article dans une revue hal-03845187v1
The mineral weathering ability of Collimonas pratensis PMB3(1) involves a Malleobactin-mediated iron acquisition system Laura Picard,Cédric Paris,Tiphaine Dhalleine,Emmanuelle Morin,Phil M. Ogeret al. Environmental Microbiology, 2022, 24 (2), pp. 784-802. ⟨10.1111/1462-2920.15508⟩ Article dans une revue hal-03194986v1
Complete Genome Sequence of Bradyrhizobium sp. Strain BDV5040, Representative of Widespread Genospecies B in Australia Christine Oger-Desfeux,Jérôme Briolay,Phil M. Oger,Bénédicte Lafay Microbiology Resource Announcements, 2021, 10 (3), pp.e01326-20. ⟨10.1128/MRA.01326-20⟩ Article dans une revue hal-03118246v1
The Piezo-Hyperthermophilic Archaeon Thermococcus piezophilus Regulates Its Energy Efficiency System to Cope With Large Hydrostatic Pressure Variations Yann Moalic,Jordan Hartunians,Cécile Dalmasso,Damien Courtine,Myriam Georgeset al. Frontiers in Microbiology, 2021, 12, pp.730231. ⟨10.3389/fmicb.2021.730231⟩ Article dans une revue hal-03413270v1
Complete genome of Bradyrhizobium sp. strain BDV5419, representative of Australian genospecies L Christine Oger-Desfeux,Jerome Briolay,Phil M. Oger,Bénédicte Lafay Microbiology Resource Announcements, 2021, 10 (8), pp.e00042-21. ⟨10.1128/MRA.00042-21⟩ Article dans une revue hal-03138171v1
Straightforward Synthesis of Chiral Terpenoid Building Blocks by Ru-Catalyzed Enantioselective Hydrogenation Johal Ruiz,Phil M. Oger,Laurent Soulère,Florence Popowycz Journal of Organic Chemistry, 2021, ⟨10.1021/acs.joc.1c00677⟩ Article dans une revue hal-03275385v1
Alkanes increase the stability of early life membrane models under extreme pressure and temperature conditions Loreto Misuraca,Bruno Demé,Phil M. Oger,Judith Peters Communications Chemistry, 2021, ⟨10.1038/s42004-021-00467-5⟩ Article dans une revue hal-03154757v1
Reappraisal of archaeal C20-C25 diether lipid (extended archaeol) origin and use as a biomarker of hypersalinity Flore Vandier,Maxime Tourte,Cara Doumbe-Kingue,Julien Plancq,Philippe Schaefferet al. Organic Geochemistry, 2021, 159, pp.104276. ⟨10.1016/j.orggeochem.2021.104276⟩ Article dans une revue hal-03289860v2
Identification of a novel bifunctional uracil DNA glycosylase from Thermococcus barophilus Ch5 Likui Zhang,Donghao Jiang,Qi Gan,Haoqiang Shi,Li Miaoet al. Applied Microbiology and Biotechnology, In press, ⟨10.1007/s00253-021-11422-8⟩ Article dans une revue hal-03280471v1
Characterization of a novel type III alcohol dehydrogenase from Thermococcus barophilus Ch5 Likui Zhang,Donghao Jiang,Yuting Li,Leilei Wu,Qing Liuet al. International Journal of Biological Macromolecules, 2021 Article dans une revue hal-03090883v1
Acid Hydrolysis for the Extraction of Archaeal Core Lipids and HPLC-MS Analysis Maxime Tourte,Philippe Schaeffer,Vincent Grossi,Phil M. Oger Bio-protocol , 2021, 11 (16), ⟨10.21769/bioprotoc.4118⟩ Article dans une revue hal-03379753v1
Biochemical characterization and mutational studies of a novel 3-methlyadenine DNA glycosylase II from the hyperthermophilic Thermococcus gammatolerans Donghao Jiang,Likui Zhang,Kunming Dong,Yong Gong,Phil M. Oger DNA Repair, 2021 Article dans une revue hal-03035060v1
Identification of a novel type of glucose dehydrogenase involved in the mineral weathering ability of Collimonas pratensis strain PMB3(1) Laura Picard,Marie-Pierre M.-P. Turpault,Phil M. Oger,Stephane Uroz FEMS Microbiology Ecology, 2021, 97 (1), pp.fiaa232. ⟨10.1093/femsec/fiaa232⟩ Article dans une revue hal-03000681v1
Characterisation of a synthetic Archeal membrane reveals a possible new adaptation route to extreme conditions Marta Salvador-Castell,Maksym Golub,Nelli Erwin,Bruno Demé,Nicholas J Brookset al. Communications Biology, 2021, 4, ⟨10.1038/s42003-021-02178-y⟩ Article dans une revue hal-03272003v1
Non-Polar Lipids as Regulators of Membrane Properties in Archaeal Lipid Bilayer Mimics Marta Salvador-Castell,Nicholas J Brooks,Roland Winter,Judith Peters,Phil M. Oger International Journal of Molecular Sciences, 2021, 22 (11), ⟨10.3390/ijms22116087⟩ Article dans une revue hal-03272006v1
Dual transcriptomics and proteomics analyses of the early stage of interaction between Caballeronia mineralivorans PML1(12) and mineral Stephane Uroz,Laura Picard,Marie-Pierre M.-P. Turpault,Lucas Auer,J. Armengaudet al. Environmental Microbiology, In press, 22 (9), pp.3838-3862. ⟨10.1111/1462-2920.15159⟩ Article dans une revue hal-02902180v1
Novel intact polar and core lipid compositions in the Pyrococcus model species, P. furiosus and P. yayanosii, reveal the largest lipid diversity amongst Thermococcales Maxime Tourte,Vanessa Kuentz,Philippe Schaeffer,Vincent Grossi,Anaïs Carioet al. Biomolecules, 2020, 10 (6), pp.830. ⟨10.3390/biom10060830⟩ Article dans une revue hal-02861881v1
Induction of non-lamellar phases in archaeal lipids at high temperature and high hydrostatic pressure by apolar polyisoprenoids Marta Salvador-Castell,Nicholas Brooks,Judith Peters,Phil M. Oger Biochimica et Biophysica Acta:Biomembranes, 2020, 1862 (2), pp.183130. ⟨10.1016/j.bbamem.2019.183130⟩ Article dans une revue hal-02364592v1
An alternative pathway for repair of deaminated bases in DNA triggered by archaeal NucS endonuclease Likui Zhang,Haoqiang Shi,Qi Gan,Yuxiao Wang,Mai Wuet al. DNA Repair, 2020, pp.102734. ⟨10.1016/j.dnarep.2019.102734⟩ Article dans une revue hal-02334467v1
Characterization of a Family IV uracil DNA glycosylase from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Qi Gan,Mengfan He,Haoqiang Shi,Phil M. Oger,Zhihui Yanget al. International Journal of Biological Macromolecules, 2020, 146, pp.475-481. ⟨10.1016/j.ijbiomac.2019.12.202⟩ Article dans une revue hal-02441935v1
Characterization and application of a family B DNA polymerase from the hyperthermophilic and radioresistant euryarchaeon Thermococcus gammatolerans Likui Zhang,Donghao Jiang,Haoqiang Shi,Mai Wu,Qi Ganet al. International Journal of Biological Macromolecules, 2020, 156, pp.217-224. ⟨10.1016/j.ijbiomac.2020.03.204⟩ Article dans une revue hal-02526997v1
Lipid phase separation induced by the apolar polyisoprenoid squalane demonstrates its role in membrane domain formation in archaeal membranes Marta Salvador-Castell,Bruno Demé,Phil M. Oger,Judith Peters Langmuir, 2020, 36 (26), pp.7375-7382. ⟨10.1021/acs.langmuir.0c00901⟩ Article dans une revue hal-02862864v1
Structural Characterization of an Archaeal Lipid Bilayer as a Function of Hydration and Temperature Marta Salvador-Castell,Bruno Demé,Phil M. Oger,Judith Peters International Journal of Molecular Sciences, 2020, 21 (5), pp.1816. ⟨10.3390/ijms21051816⟩ Article dans une revue hal-02508365v1
COVID-19 infection in first trimester of pregnancy marked by a liver cytolysis in a woman previously treated by hydroxychloroquine for repeated implantation failure: a case report F. Lamazou,P. Oger,R. Dieli-Crimi,A. Guerin,V. Letouzeyet al. BMC Infectious Diseases, 2020, 20, pp.845. ⟨10.1186/s12879-020-05551-0⟩ Article dans une revue hal-03278006v1
Apolar Polyisoprenoids Located in the Midplane of the Bilayer Regulate the Response of an Archaeal-Like Membrane to High Temperature and Pressure Josephine Loricco,Marta Salvador-Castell,Bruno Demé,Judith Peters,Phil M. Oger Frontiers in Chemistry, 2020, 8, pp.594039. ⟨10.3389/fchem.2020.594039⟩ Article dans une revue hal-03000614v2
High-Temperature Behavior of Early Life Membrane Models Loreto Misuraca,Antonino Caliò,Isabelle Grillo,Axelle Grélard,Phil M. Ogeret al. Langmuir, 2020, 36 (45), pp.13516-13526. ⟨10.1021/acs.langmuir.0c02258⟩ Article dans une revue hal-02988681v1
New Insights Into DNA Repair Revealed by NucS Endonucleases From Hyperthermophilic Archaea Likui Zhang,Donghao Jiang,Mai Wu,Zhihui Yang,Phil M. Oger Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.01263⟩ Article dans une revue hal-02887791v1
Draft Genome Sequence of Collimonas pratensis Strain PMB3(1), an Effective Mineral-Weathering and Chitin-Hydrolyzing Bacterial Strain Laura Picard,Phil M. Oger,Marie-Pierre M.-P. Turpault,Stephane Uroz Microbiology Resource Announcements, 2020, 9 (37), ⟨10.1128/MRA.00601-20⟩ Article dans une revue hal-02939115v1
Functionalized Membrane Domains: An Ancestral Feature of Archaea? Maxime Tourte,Philippe Schaeffer,Vincent Grossi,Phil M. Oger Frontiers in Microbiology, 2020, 11, pp.526. ⟨10.3389/fmicb.2020.00526⟩ Article dans une revue hal-02553764v1
Protomembranes at the origin of life Loreto Misuraca,Bruno Demé,Judith Peters,Phil M. Oger,Phil M. Oger European Biophysics Journal, 2019 Article dans une revue hal-02334473v1
Biochemical characterization of a thermostable DNA ligase from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Haoqiang Shi,Yanchao Huang,Qi Gan,Mianwen Rui,Hongxun Chenet al. Applied Microbiology and Biotechnology, 2019, ⟨10.1007/s00253-019-09736-9⟩ Article dans une revue hal-02091415v1
In Search for the Membrane Regulators of Archaea Marta Salvador-Castell,Maxime Tourte,Phil M. Oger International Journal of Molecular Sciences, 2019, 20 (18), pp.4434. ⟨10.3390/ijms20184434⟩ Article dans une revue hal-02283370v1
Plant Symbionts Are Engineers of the Plant-Associated Microbiome Stéphane Uroz,Pierre-Emmanuel Courty,Phil M. Oger Trends in Plant Science, 2019, 24 (10), pp.905-916. ⟨10.1016/j.tplants.2019.06.008⟩ Article dans une revue hal-02334474v1
Biochemical characterization and mutational studies of the thermostable uracil DNA glycosylase from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Haoqiang Shi,Qi Gan,Donghao Jiang,Yuqi Wu,Youcheng Yinet al. International Journal of Biological Macromolecules, 2019, ⟨10.1016/j.ijbiomac.2019.05.073⟩ Article dans une revue hal-02130096v1
The first study on the impact of osmolytes in whole cells of high temperature-adapted microorganisms Marta Salvador-Castell,Maksym Golub,Nicolas Martinez,Jacques Ollivier,Judith Peterset al. Soft Matter, 2019, 15 (41), pp.8381-8391. ⟨10.1039/c9sm01196j⟩ Article dans une revue hal-02318499v1
Corrigendum to “Caballeronia mineralivorans sp. nov., isolated from oak-Scleroderma citrinum mycorrhizosphere” [Syst. Appl. Microbiol. 40 (2017) 345–351] S. Uroz,Phil M. Oger Systematic and Applied Microbiology, 2019, 42 (3), pp.423-424. ⟨10.1016/j.syapm.2019.03.001⟩ Article dans une revue hal-02122345v1
Biochemical characterization and mutational studies of the 8-oxoguanine DNA glycosylase from the hyperthermophilic and radioresistant archaeon Thermococcus gammatolerans Likui Zhang,Yuting Li,Haoqiang Shi,Dai Zhang,Zhihui Yanget al. Applied Microbiology and Biotechnology, 2019, ⟨10.1007/s00253-019-10031-w⟩ Article dans une revue hal-02283293v1
Biochemical characterization of a thermostable endonuclease V from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5 Yuxiao Wang,Likui Zhang,Xinyuan Zhu,Yuting Li,Haoqiang Shiet al. International Journal of Biological Macromolecules, 2018, 117, pp.17-24. ⟨10.1016/j.ijbiomac.2018.05.155⟩ Article dans une revue hal-02001372v1
Complete Genome Sequences of 11 Type Species from the Thermococcus Genus of Hyperthermophilic and Piezophilic Archaea Phil M. Oger Genome Announcements, 2018, 6 (8) Article dans une revue hal-02001367v1
The Effect of Crowding on Protein Stability, Rigidity, and High Pressure Sensitivity in Whole Cells M. Golub,N. Martinez,G. Michoud,J. Ollivier,M. Jebbaret al. Langmuir, 2018, 34 (35), pp.10419-10425. ⟨10.1021/acs.langmuir.8b01240⟩ Article dans une revue hal-02001365v1
Can a target zone safer than Lewinnek's safe zone be defined to prevent instability of total hip arthroplasties? Case-control study of 56 dislocated THA and 93 matched controls Nicolas Reina,Sophie Putman,Romain Desmarchelier,El Hadi Sari Ali,Philippe Chironet al. Orthopaedics & Traumatology: Surgery & Research, 2017, 103 (5), pp. 657-661. ⟨10.1016/j.otsr.2017.05.015⟩ Article dans une revue hal-01587112v1
700 MPa sample stick for studying liquid samples or solid-gas reactions down to 1.8 K and up to 550 K Eddy Lelièvre-Berna,Bruno Demé,Julien Gonthier,Jean-Paul Gonzales,James Mauriceet al. Journal of Neutron Research, 2017, 19 (1-2), pp.77-84. ⟨10.3233/JNR-170044⟩ Article dans une revue hal-03930609v1
Coping with the pressure: Microbial adaptation to high hydrostatic pressure in deep sea hydrothermal vents Phil M. Oger Journal of Physics: Conference Series, 2017, 950, pp.032016. ⟨10.1088/1742-6596/950/3/032016⟩ Article dans une revue hal-02122369v1
Copper transporters are responsible for copper isotopic fractionation in eukaryotic cells Jean-Loup Cadiou,Sylvain Pichat,Victor P. Bondanese,Alexandre Soulard,Toshiyuki Fujiiet al. Scientific Reports, 2017, 7, ⟨10.1038/srep44533⟩ Article dans une revue hal-01632761v1
Complete Genome Sequence of the Hyperthermophilic Piezophilic Archaeon Pyrococcus kukulkanii NCB100 Isolated from the Rebecca's Roost Hydrothermal Vent in the Guaymas Basin Phil M. Oger,Nolwenn Callac,Christine Oger-Desfeux,Sandrine Hughes,Benjamin Gilletet al. Genome Announcements, 2017, 5 (7), ⟨10.1128/genomeA.01667-16⟩ Article dans une revue hal-02001357v1
Epsilonproteobacteria dominate bacterial diversity at a natural tar seep F. Lormieres,Phil M. Oger Comptes Rendus. Biologies, 2017, 340 (4), pp.238-243. ⟨10.1016/j.crvi.2016.10.001⟩ Article dans une revue hal-02001356v1
Contribution à l'inventaire des araignées de l'île Cavallo (archipel des Lavezzi, Corse-du-Sud), avec une argiope nouvelle pour la faune française : Argiope trifasciata (Forsskål, 1775) (Araneae, Araneidae) Philippe Ponel,P. Oger,Yoann Poher,Frédéric Médail Revue arachnologique, série 2, 2017, 4 (2), pp.2-4 Article dans une revue hal-03470516v1
Caballeronia mineralivorans sp. nov., isolated from oak-Scleroderma citrinum mycorrhizosphere. Stéphane Uroz,Phil M. Oger Systematic and Applied Microbiology, 2017, 40 (6), pp.345-351. ⟨10.1016/j.syapm.2017.05.005⟩ Article dans une revue hal-01644024v1
High protein flexibility and reduced hydration water dynamics are key pressure adaptive strategies in prokaryotes Nicolas Martinez,G. Michoud,A. Cario,J. Ollivier,Bruno Franzettiet al. Scientific Reports, 2016, 6, ⟨10.1038/srep32816⟩ Article dans une revue hal-01427793v1
Erratum for Dalmasso et al., Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus piezophilus CDGST, Able To Grow under Extreme Hydrostatic Pressures C. Dalmasso,Phil M. Oger,D. Courtine,M. Georges,K. Takaiet al. Genome Announcements, 2016, 4 (5) Article dans une revue hal-02001333v1
Hypoxia induces copper stable isotope fractionation in hepatocellular carcinoma, in a HIF-independent manner Victor Bondanese,Aline Lamboux,Mélanie Simon,Jérôme Lafont,Emmanuelle Albalatet al. Metallomics, 2016, 8 (11), pp.1177-1184. ⟨10.1039/c6mt00102e⟩ Article dans une revue hal-02132068v1
Medical applications of Cu, Zn, and S isotope effects F. Albarede,P. Telouk,V. Balter,V. P. Bondanese,E. Albalatet al. Metallomics, 2016, 8 (10), pp.1056-1070. ⟨10.1039/c5mt00316d⟩ Article dans une revue hal-02001326v1
Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus barophilus Ch5, Capable of Growth at the Expense of Hydrogenogenesis from Carbon Monoxide and Formate Phil M. Oger,T. G. Sokolova,D. A. Kozhevnikova,E. A. Taranov,P. Vannieret al. Genome Announcements, 2016, 4 (1), ⟨10.1128/genomeA.01534-15⟩ Article dans une revue hal-02001341v1
Pyrococcus kukulkanii sp. nov., a hyperthermophilic, piezophilic archaeon isolated from a deep-sea hydrothermal vent N. Callac,Phil M. Oger,Françoise Lesongeur,Jayne E. Rattray,Pauline Vannieret al. International Journal of Systematic and Evolutionary Microbiology, 2016, 66 (8), pp.3142-9. ⟨10.1099/ijsem.0.001160⟩ Article dans une revue hal-02001330v1
Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities S. Uroz,P. Oger,E. Tisserand,A. Cebron,M. -P. Turpaultet al. Scientific Reports, 2016, 6 (1), pp.1-11. ⟨10.1038/srep27756⟩ Article dans une revue hal-01579579v1
Random mutagenesis of the hyperthermophilic archaeon Pyrococcus furiosus using in vitro mariner transposition and natural transformation Natalia Guschinskaya,Romain Brunel,Maxime Tourte,Gina L. Lipscomb,Michael W. W. Adamset al. Scientific Reports, 2016, 6, pp.36711. ⟨10.1038/srep36711⟩ Article dans une revue hal-01917847v1
&lt;em&gt;Thermococcus piezophilus&lt;/em&gt; sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise Cécile Dalmasso,Philippe Oger,Gwendoline Selva,Damien Courtine,Stéphane L’haridonet al. Systematic and Applied Microbiology, 2016, 39 (7), pp.440-444. ⟨10.1016/j.syapm.2016.08.003⟩ Article dans une revue hal-02636723v1
Molecular chaperone accumulation as a function of stress evidences adaptation to high hydrostatic pressure in the piezophilic archaeon Thermococcus barophilus A. Cario,M. Jebbar,A. Thiel,N. Kervarec,Phil M. Oger Scientific Reports, 2016, 6, pp.29483. ⟨10.1038/srep29483⟩ Article dans une revue hal-02001331v1
Classes of organic molecules targeted by a methanogenic microbial consortium grown on sedimentary rocks of various maturities Margaux Meslé,Gilles Dromart,Frank Haeseler,Philippe Oger Frontiers in Microbiology, 2015, 6, ⟨10.3389/fmicb.2015.00589⟩ Article dans une revue hal-01256322v1
Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes. Mohamed Jebbar,Bruno Franzetti,Eric Girard,Philippe Oger Extremophiles, 2015, 19 (4), pp.721-40 Article dans une revue hal-01199266v1
Genome expression of Thermococcus barophilus and Thermococcus kodakarensis in response to different hydrostatic pressure conditions Pauline Vannier,Grégoire Michoud,Phil M. Oger,Viggó Þór Marteinsson,Mohamed Jebbar Research in Microbiology, 2015, 166 (9), pp.717-725. ⟨10.1016/j.resmic.2015.07.006⟩ Article dans une revue istex hal-02122706v1
Restoration of the di-myo-inositol-phosphate pathway in the piezo-hyperthermophilic archaeon Thermococcus barophilus Anaïs Cario,Alex Mizgier,Axel Thiel,Mohamed Jebbar,Phil M. Oger Biochimie, 2015, 118, pp.286-293. ⟨10.1016/j.biochi.2015.05.011⟩ Article dans une revue hal-02122725v1
Methanogenic microbial community of the Eastern Paris Basin: Potential for energy production from organic-rich shales Margaux Meslé,Charlotte Periot,Gilles Dromart,Philippe Oger International Journal of Coal Geology, 2015, 149, pp.67-76. ⟨10.1016/j.coal.2015.07.002⟩ Article dans une revue istex hal-01360887v1
Draft Genome Sequence of Burkholderia sp. Strain PML1(12), an Ectomycorrhizosphere-Inhabiting Bacterium with Effective Mineral-Weathering Ability Stephane Uroz,Phil Oger Genome Announcements, 2015, 3 (4), ⟨10.1128/genomeA.00798-15⟩ Article dans une revue hal-02916120v1
Membrane homeoviscous adaptation in the piezo-hyperthermophilic archaeon Thermococcus barophilus Anaïs Cario,Vincent Grossi,Philippe Schaeffer,Philippe M. Oger Frontiers in Microbiology, 2015, 6, pp.1152. ⟨10.3389/fmicb.2015.01152⟩ Article dans une revue hal-01366758v1
High hydrostatic pressure increases amino acid requirements in the piezo-hyperthermophilic archaeon Thermococcus barophilus Anaïs Cario,Florence Lormières,Xiao Xiang,Phil M. Oger Research in Microbiology, 2015, 166 (9), pp.710-716. ⟨10.1016/j.resmic.2015.07.004⟩ Article dans une revue istex hal-02122717v1
La vie sous pression des microorganismes piézophiles Phil M. Oger,Anaïs Cario Biologie Aujourd'hui, 2014, 208 (3), pp.193-206. ⟨10.1051/jbio/2014023⟩ Article dans une revue istex hal-02122751v1
Deep sea microbes probed by incoherent neutron scattering under high hydrostatic pressure. Judith Peters,Nicolas Martinez,Grégoire Michoud,Anaïs Cario,Bruno Franzettiet al. Zeitschrift für Physikalische Chemie, 2014, 228, 10-12, pp.1121-1133. ⟨10.1515/zpch-2014-0547⟩ Article dans une revue hal-01149032v1
Adaptation of the membrane in Archaea Anaïs Cario,Phil M. Oger Biophysical Chemistry, 2013, 183, pp.42-56. ⟨10.1016/j.bpc.2013.06.020⟩ Article dans une revue istex hal-02122759v1
Microbial methanogenesis in subsurface oil and coal Margaux Mesle,Gilles Dromart,Phil M. Oger Research in Microbiology, 2013, 164 (9), pp.959-972. ⟨10.1016/j.resmic.2013.07.004⟩ Article dans une revue istex hal-02122787v1
Biostimulation to identify microbial communities involved in methane generation in shallow, kerogen-rich shales M. Meslé,C. Périot,G. Dromart,Phil M. Oger Journal of Applied Microbiology, 2013, 114 (1), pp.55-70. ⟨10.1111/jam.12015⟩ Article dans une revue hal-02122792v1
iGEM Europe 2013: Des gènes et des machines Phil M. Oger,Corinne Dorel Biofutur, 2013, 349, pp.50-51 Article dans une revue hal-02122782v1
Methanization of fossil fuel: a possible sustainable future energy source for mankind Phil M. Oger Fermentation, 2012, 1, pp.e110 Article dans une revue hal-02122818v1
Correlation of the Abundance of Betaproteobacteria on Mineral Surfaces with Mineral Weathering in Forest Soils C. Lepleux,M. Turpault,Phil M. Oger,P. Frey-Klett,S. Uroz Applied and Environmental Microbiology, 2012, 78 (19), pp.7114-7119. ⟨10.1128/AEM.00996-12⟩ Article dans une revue hal-02122800v1
Distinct Ectomycorrhizospheres Share Similar Bacterial Communities as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes Stephane Uroz,P. Oger,E. Morin,P. Frey-Klett Applied and Environmental Microbiology, 2012, 78 (8), pp. 3020-3024. ⟨10.1128/AEM.06742-11⟩ Article dans une revue hal-02916135v1
Distinct Ectomycorrhizospheres Share Similar Bacterial Communities as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes Stéphane Uroz,P. Oger,Emmanuelle Morin,P. Frey-Klett Applied and Environmental Microbiology, 2012, 78 (8), pp.3020 - 3024. ⟨10.1128/AEM.06742-11⟩ Article dans une revue hal-01268355v1
A novel bacteriophage morphotype with a ribbon-like structure at the tail extremity Eric Prestel,Christophe Regeard,James Andrews,Philippe M. Oger,Michael Dubow Research Journal of Microbiology, 2012, 7 (1), pp.75. ⟨10.3923/jm.2012.75.81⟩ Article dans une revue hal-00714242v1
Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3. Susan Lucas,James Han,Alla Lapidus,Jan-Fang Cheng,Lynne A Goodwinet al. Journal of Bacteriology, 2012, 194 (21), pp.5974-5. ⟨10.1128/JB.01430-12⟩ Article dans une revue hal-00773159v1
Correlation of the Abundance of Betaproteobacteria on Mineral Surfaces with Mineral Weathering in Forest Soils C. Lepleux,M. Turpault,P. Oger,P. Frey-Klett,Stephane Uroz Applied and Environmental Microbiology, 2012, 78 (19), pp. 7114-7119. ⟨10.1128/AEM.00996-12⟩ Article dans une revue hal-02916134v1
Des microbes repoussent les limites de la vie Philippe M. Oger,Bruno Franzetti Biofutur, 2012, 336, pp.36-39 Article dans une revue hal-00829758v1
Pyrococcus yayanosii sp. nov.,the first obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. Jean-Louis Birrien,Xiang Zeng,Mohamed Jebbar,Marie-Anne Cambon-Bonavita,Joël Quérellouet al. International Journal of Systematic and Evolutionary Microbiology, 2011, Epub ahead of print. ⟨10.1099/ijs.0.024653-0⟩ Article dans une revue hal-00609785v1
Fractionation of Stable Zinc Isotopes in the Zinc Hyperaccumulator Arabidopsis halleri and Nonaccumulator Arabidopsis petraea Anne-Marie Aucour,Sylvain Pichat,M. R. Macnair,Philippe M. Oger Environmental Science and Technology, 2011, 45 (21), pp.9212-9217. ⟨10.1021/es200874x⟩ Article dans une revue insu-00683310v1
Monitoring microbial redox transformations of metal and metalloid elements under high pressure using in situ X-ray absorption spectroscopy Augustin Picard,Isabelle Daniel,D. Testemale,I. Kieffer,P. Bleuetet al. Geobiology, 2011, 9 (2), pp.196-204. ⟨10.1111/j.1472-4669.2010.00270.x⟩ Article dans une revue hal-00659828v1
Bacterial weathering and its contribution to nutrient cycling in temperate forest ecosystems Stéphane Uroz,Philippe M. Oger,Cendrella Lepleux,Christelle Collignon,Pascale P. Frey-Klettet al. Research in Microbiology, 2011, 162 (9), pp.820-831. ⟨10.1016/j.resmic.2011.01.013⟩ Article dans une revue istex insu-00682028v1
Complete Genome Sequence of the Hyperthermophilic, Piezophilic, Heterotrophic, and Carboxydotrophic Archaeon Thermococcus barophilus MP Pauline Vannier,Viggo Thor Marteinsson,Olafur Hedinn Fridjonsson,Philippe . Oger,Mohamed Jebbar Journal of Bacteriology, 2011, 193 (6), pp.1481-1482. ⟨10.1128/JB.01490-10⟩ Article dans une revue insu-00683928v1
Complete Genome Sequence of the Obligate Piezophilic Hyperthermophilic Archaeon Pyrococcus yayanosii CH1 Xu Jun,Lupeng Liu,Minjuan Xu,Philippe Oger,Fengping Wanget al. Journal of Bacteriology, 2011, 193 (16), pp.4297-4298. ⟨10.1128/JB.05345-11⟩ Article dans une revue insu-00683340v1
Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp Strain AM4, Capable of Organotrophic Growth and Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of Carbon Monoxide Philippe M. Oger,Tatyana G. Sokolova,Darya A. Kozhevnikova,Nikolay A. Chernyh,Douglas H. Bartlettet al. Journal of Bacteriology, 2011, 193 (24), pp.7019-7020. ⟨10.1128/JB.06259-11⟩ Article dans une revue insu-00682014v1
The many ways of coping with pressure Philippe Oger,Mohamed Jebbar Research in Microbiology, 2010, 161 (10), pp.799-809. ⟨10.1016/j.resmic.2010.09.017⟩ Article dans une revue hal-00618586v1
In situ Raman and X-ray spectroscopies to monitor microbial activities under high hydrostatic pressure Philippe M. Oger,Isabelle Daniel,Aude Picard Annals of the New York Academy of Sciences, 2010, 1189, pp.113-120. ⟨10.1111/j.1749-6632.2009.05176.x⟩ Article dans une revue istex hal-00681774v1
Experiments and geochemical modelling of CO(2) sequestration by olivine: Potential, quantification Bruno Garcia,V. Beaumont,Erwan Perfetti,V. Rouchon,D. Blanchetet al. Applied Geochemistry, 2010, 25 (9), pp.1383-1396. ⟨10.1016/j.apgeochem.2010.06.009⟩ Article dans une revue istex insu-00677011v1
The S -Adenosyl- l -Homocysteine Hydrolase Gene ahcY of Agrobacterium radiobacter K84 Is Required for Optimal Growth, Antibiotic Production, and Biocontrol of Crown Gall Disease Ramón Penyalver,Phil M. Oger,Shengchang Su,Belén Alvarez,Carmina Salcedoet al. Molecular Plant-Microbe Interactions, 2009, 22 (6), pp.713-724. ⟨10.1094/MPMI-22-6-0713⟩ Article dans une revue hal-02122845v1
Pyrococcus CH1, an obligate piezophilic hyperthermophile extending the upper pressure-temperature limits for life X. Zeng,J.-L. Birrien,Y. Fouquet,G. Cherkashov,M. Jebbaret al. The International Society of Microbiologial Ecology Journal, 2009, pp.1 - 4 Article dans une revue hal-00406501v1
Quorum Sensing and Quorum Quenching: The Yin and Yang of Bacterial Communication Stéphane Uroz,Yves Dessaux,Phil M. Oger ChemBioChem, 2009, 10 (2), pp.205-216. ⟨10.1002/cbic.200800521⟩ Article dans une revue (article de synthèse) istex hal-02122861v1
Micro-X-ray absorption near edge structure as a suitable probe to monitor live organisms. Philippe M. Oger,Isabelle Daniel,Alexandre Simionovici,A. Picard Spectrochimica Acta Part B: Atomic Spectroscopy, 2008, 63(4), pp.512-517. ⟨10.1016/j.sab.2007.12.013⟩ Article dans une revue istex hal-00341800v1
A Rhodococcus qsdA-Encoded Enzyme Defines a Novel Class of Large-Spectrum Quorum-Quenching Lactonases Stéphane S. Uroz,Phil M. Oger,Emilie Chapelle,Marie-Thérèse Adeline,Denis Faureet al. Applied and Environmental Microbiology, 2008, 74 (5), pp.1357-1366. ⟨10.1128/AEM.02014-07⟩ Article dans une revue hal-02665934v1
A Rhodococcus qsdA-encoded enzyme defines a novel class of large-spectrum quorum-quenching lactonases. S. Uroz,Philippe M. Oger,E. Chapelle,M.-T. Adeline,D. Faureet al. Applied and Environmental Microbiology, 2008, 74, pp.1357-1366 Article dans une revue hal-00342712v1
In situ monitoring by quantitative Raman spectroscopy of alcoholic fermentation by Saccharomyces cerevisiae under high pressure. A. Picard,Isabelle Daniel,Gilles Montagnac,Philippe M. Oger Extremophiles, 2007, 11, pp.445-452 Article dans une revue hal-00341399v1
In situ monitoring of alcohol fermentation by Saccharomyces cerevisiae under high pressure by quantitative Raman spectroscopy. A. Picard,Isabelle Daniel,Gilles Montagnac,Philippe M. Oger Extremophiles, 2007, 11, pp.445-452 Article dans une revue hal-00342705v1
A sensitive pressure sensor for diamond anvil cell experiments up to 2 GPa: FluoSpheres® Aude Picard,Philippe M. Oger,Isabelle Daniel,Hervé Cardon,Gilles Montagnacet al. Journal of Applied Physics, 2006, 100, ⟨10.1063/1.2234821⟩ Article dans une revue hal-00093036v1
AHL-mediated quorum-sensing in Azospirillum: an exception rather than a rule. L. Vial,C. Cuny,K. Gluchoff-Fiasson,G. Comte,Philippe M. Ogeret al. Microbial ecology, 2006, 58, pp.155-168 Article dans une revue hal-00342700v1
N-acyl homoserine lactones are degraded via an amidolytic activity in Comamonas sp. strain D1. Stéphane Uroz,Yves Dessaux,Philippe M. Oger,Siri Ram Chhabra,Miguel Cámaraet al. Archives of Microbiology, 2006, 187 (3), pp.249-256. ⟨10.1007/s00203-006-0186-5⟩ Article dans une revue istex hal-00119105v1
Development of a low-pressure diamond anvil cell and analytical tools to monitor microbial activities in situ under controlled P and T. Philippe M. Oger,Isabelle Daniel,A. Picard Biochimica et Biophysica Acta Proteins and Proteomics, 2006, 1764(3), pp.434-442 Article dans une revue hal-00341802v1
Origin of life and biochemistry under high pressure-conditions. Isabelle Daniel,Philippe M. Oger,R. Winter Chemical Society Reviews, 2006, 35, pp.858-875 Article dans une revue hal-00342697v1
N-acyl-homoserine lactone-mediated quorum-sensing in Azospirillum: an exception rather than a rule. Ludovic Vial,Caroline Cuny,Katia Gluchoff-Fiasson,Gilles Comte,Phil M. Ogeret al. FEMS Microbiology Ecology, 2006, 58, pp.155-168. ⟨10.1111/j.1574-6941.2006.00153.x⟩ Article dans une revue hal-00119123v1
Development of a low-pressure diamond anvil cell and analytical tools to monitor microbial activities in situ under controlled P and T Philippe M. Oger,Isabelle Daniel,Aude Picard BBA - Biochimica et Biophysica Acta, 2006, 1764, pp.434-442. ⟨10.1016/j.bbapap.2005.11.009⟩ Article dans une revue hal-00093586v1
Origins of life and biochemistry under high-pressure conditions. Isabelle Daniel,Philippe M. Oger,R. Winter Chemical Society Reviews, 2006, 35(10), pp.858-875 Article dans une revue hal-00341807v1
N-Acylhomoserine lactone quorum-sensing molecules are modified and degraded by Rhodococcus erythropolis W2 by both amidolytic and novel oxidoreductase activities. Stéphane Uroz,Siri Ram Chhabra,Miguel Cámara,Paul Williams,Philippe M. Ogeret al. Microbiology, 2005, 151 (10), pp.3313-3322. ⟨10.1099/mic.0.27961-0⟩ Article dans une revue hal-00019097v1
Engineering root exudation of Lotus towards the production of two novel carbon compounds leads to the selection of distinct microbial populations in the rhizosphere. Philippe M. Oger,H. Mansouri,X. Nesme,Y. Dessaux Microbiol. Ecol., 2004, 47 (1), pp.96-103. ⟨10.1007/s00248-003-2012-9⟩ Article dans une revue istex hal-00122258v1
A Highly Selectable and Highly Transferable Ti Plasmid to Study Conjugal Host Range and Ti Plasmid Dissemination in Complex Ecosystems S. Teyssier-Cuvelle,Phil M. Oger,Christophe Mougel,K. Groud,S. Farrandet al. Microbial ecology, 2004, 48 (1), pp.10-18. ⟨10.1007/s00248-003-2023-6⟩ Article dans une revue istex hal-02123026v1
In situ micro X-ray absorption near edge structure study of microbiologically reduced selenite (SeO32−) Phil M. Oger,I. Daniel,B. Cournoyer,A. Simionovici Spectrochimica Acta Part B: Atomic Spectroscopy, 2004, 59 (10-11), pp.1681-1686. ⟨10.1016/j.sab.2004.07.021⟩ Article dans une revue istex hal-02123018v1
Novel bacteria degrading N-acylhomoserine lactones and their use as quenchers of quorum-sensing-regulated functions of plant-pathogenic bacteria. Stéphane Uroz,Cathy d'Angelo-Picard,Aurélien Carlier,Miena Elasri,Carine Sicotet al. Microbiology, 2003, 149 (8), pp.1981-1989. ⟨10.1099/mic.0.26375-0⟩ Article dans une revue hal-00135468v1
Agrobacterium is a definable genus of the family Rhizobiaceae S. Farrand,Peter van Berkum,Phil M. Oger International Journal of Systematic and Evolutionary Microbiology, 2003, 53 (5), pp.1681-1687. ⟨10.1099/ijs.0.02445-0⟩ Article dans une revue hal-02123030v1
Engineered rhizosphere: the trophic bias generated by opine-producing plants is independent of the opine type, the soil origin, and the plant species. Hounayda Mansouri,Annik Petit,Phil Oger,Yves Dessaux Applied and Environmental Microbiology, 2002, 68 (5), pp.2562-6. ⟨10.1128/AEM.68.5.2562-2566.2002⟩ Article dans une revue hal-00145331v1
Engineering bacterial competitiveness and persistence in the phytosphere. Michael A Savka,Yves Dessaux,Philippe M. Oger,Silvia Rossbach Molecular Plant-Microbe Interactions, 2002, 15 (9), pp.866-74 Article dans une revue hal-00145850v1
Importance of the O-antigen, core-region and lipid A of rhizobial lipopolysaccharides for the induction of systemic resistance in potato to Globodera pallida Martina Reitz,Phil M. Oger,Andreas A Meyer,Karsten Niehaus,Stephen Farrandet al. Nematology, 2002, 4 (1), pp.73 - 79. ⟨10.1163/156854102760082221⟩ Article dans une revue istex hal-01759659v1
Two Opines Control Conjugal Transfer of an Agrobacterium Plasmid by Regulating Expression of Separate Copies of the Quorum-Sensing Activator Gene traR Phil M. Oger,S. Farrand Journal of Bacteriology, 2002, 184 (4), pp.1121-1131. ⟨10.1128/jb.184.4.1121-1131.2002⟩ Article dans une revue hal-02123037v1
Co-evolution of the agrocinopine opines and the agrocinopine-mediated control of TraR, the quorum-sensing activator of the Ti plasmid conjugation system Phil M. Oger,Stephen Farrand Molecular Microbiology, 2001, 41 (5), pp.1173-1185. ⟨10.1046/j.1365-2958.2001.02584.x⟩ Article dans une revue hal-02123045v1
Iron-Binding Compounds from Agrobacterium spp.: Biological Control Strain Agrobacterium rhizogenes K84 Produces a Hydroxamate Siderophore R. Penyalver,Phil M. Oger,M. Lopez,S. Farrand Applied and Environmental Microbiology, 2001, 67 (2), pp.654-664. ⟨10.1128/AEM.67.2.654-664.2001⟩ Article dans une revue hal-02123047v1
Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp. M. Elasri,S. Delorme,P. Lemanceau,G. Stewart,B. Laueet al. Applied and Environmental Microbiology, 2001, 67 (3), pp.1198-209. ⟨10.1128/AEM.67.3.1198-1209.2001⟩ Article dans une revue hal-00150154v1
Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp M. Elasri,S. Delorme,Philippe P. Lemanceau,G. Stewart,B. Laueet al. Applied and Environmental Microbiology, 2001, 67 (3), pp.1198-1209 Article dans une revue hal-02671516v1
A second T-region of the soybean-supervirulent chrysopine-type Ti plasmid pTiChry5, and construction of a fully disarmed vir helper plasmid. K. Palanichelvam,P. Oger,S. J. Clough,C. Cha,A. F. Bentet al. Molecular Plant-Microbe Interactions, 2000, 13 (10), pp.1081-91 Article dans une revue hal-00165069v1
Effect of crop rotation and soil cover on alteration of the soil microflora generated by the culture of transgenic plants producing opines. P. Oger,H. Mansouri,Y. Dessaux Molecular Ecology, 2000, 9 (7), pp.881-90. ⟨10.1046/j.1365-294x.2000.00940.x⟩ Article dans une revue istex hal-00165030v1
The Bases of Crown Gall Tumorigenesis J. Zhu,Phil M. Oger,B. Schrammeijer,J. Hooykaas,S. Farrandet al. Journal of Bacteriology, 2000, 182 (14), pp.3885-3895. ⟨10.1128/JB.182.14.3885-3895.2000⟩ Article dans une revue hal-02123051v1
Validity, sensitivity and resolution limit of the PCR-RFLP analysis of the rrs (16S rRNA gene) as a tool to identify soil-borne and plant-associated bacterial populations Phil Oger,Yves Dessaux,Annick Petit,Louis Gardan,Charles Manceauet al. Genetics Selection Evolution, 1998, 30 (Suppl), pp.S311-S321 Article dans une revue hal-00894248v1
Validity, sensitivity and resolution limit of the PCR-RFLP analysis of the rrs (16S rRNA gene) as a tool to identify soil-borne and plant-associated bacterial populations Philippe Oger,Yves Dessaux,A. Petit,L. Gardan,Charles Manceauet al. Genetics Selection Evolution, 1998, 30 (suppl. 1), pp.S311-S321 Article dans une revue hal-02698473v1
Octopine-type Ti plasmids code for a mannopine-inducible dominant-negative allele of traR, the quorum-sensing activator that regulates Ti plasmid conjugal transfer Phil M. Oger,Kun-Soo Kim,Rebecca Sackett,Kevin Piper,Stephen Farrand Molecular Microbiology, 1998, 27 (2), pp.277-288. ⟨10.1046/j.1365-2958.1998.00671.x⟩ Article dans une revue hal-02123057v1
Genetically engineered plants producing opines alter their biological environment Phil M. Oger,Annik Petit,Yves Dessaux Nature Biotechnology, 1997, 15 (4), pp.369-372. ⟨10.1038/nbt0497-369⟩ Article dans une revue hal-02123062v1
A simple technique for direct transformation and regeneration of the diploid legume species Lotus japonicus Phil M. Oger,Annik Petit,Yves Dessaux Plant Science, 1996, 116 (2), pp.159-168. ⟨10.1016/0168-9452(96)04391-9⟩ Article dans une revue istex hal-02123064v1
The use of digoxigenin-lebbelled probes to detect DNA sequences specific for plant pathogenic bacteria Y. Dessaux,Miena Elasri,E. Glickmann,Phil M. Oger,Annick Petitet al. Cellular and Molecular Biology, 1995, 41 (7), pp.993-943 Article dans une revue hal-02123170v1

Communication dans un congrès (27)

Chasing the myth of high pressure adaptation in piezophilic organisms Philippe Oger 12th International Conference on High Pressure Bioscience and Biotechnology, The International Association of High Pressure Bioscience and Biotechnology (HPBB), Oct 2024, Lyon, France Communication dans un congrès hal-04902307v1
Gene deletions in the lipid synthesis pathway of P. furiosus reveal novel membrane lipids and enzymatic promiscuity Margot Saracco,P. Schaeffer,P. Adam,Barbara Bourgade,Florence Ruaudelet al. Molecular Biology of Archaea (MBoA), Jun 2024, Palaiseau (Ecole Polytechnique), France Communication dans un congrès hal-04884976v1
Adaptation to the extreme in polyextremophilic archaea Philippe Oger JDN 2023 - 31ème journées de la Diffusion Neutronique, Société Française de la Neutronique (SFN), Oct 2023, Erquy, France Communication dans un congrès hal-04902322v1
Deciphering the relative contribution of polar lipids in the adaptation to extreme environmental conditions Margot Saracco,Lucie Devaux,Anael Galot,P. Schaeffer,Stéphane Fontanayet al. XXII GEM Conference - Membranes: Structure, Dynamics and Function, French Membrane Group, Mar 2023, Autrans, France Communication dans un congrès hal-04903235v1
The Legacy of Pyrococcus abyssi : from 1 to 100 Thermococcales genomes Violette Da Cunha,Catherine Badel,Phil M. Oger,Loïs Maignien,Ghislaine Magdelenatet al. The 20th MicroScope anniversary - Journée Thématique, Violette Da Cunha; Patrick Forterre, Sep 2023, Évry-Courcouronnes, France Communication dans un congrès hal-04330663v1
Exploring the behavior of a novel membrane ultrastructure involved in high pressure adaptation in Archaea Marta Salvador-Castell,Philippe Oger,Bruno Demé,Maksym Golub,Roland Winteret al. 11th International Conference on High Pressure Bioscience and Biotechnology, International Association of High Pressure Bioscience and Biotechnology, Jul 2022, Copenhagen, Denmark Communication dans un congrès hal-04903138v1
Membrane adaptation in the hyperthermophilic and piezophilic archaeon Thermococcus barophilus Philippe Oger The 11th International Conference on High Pressure Bioscience and Biotechnology, The International Association of High Pressure Bioscience and Biotechnology (HPBB), Jul 2022, Copengague, Denmark Communication dans un congrès hal-04902329v1
Redefining the archaea Thermococcales order with the biogeographic repartition and comparative genomic analysis of more than 100 isolates. Violette Da Cunha,Philippe Oger,Damien Courtine,Loïs Maignien,Mohamed Jebbaret al. 2022 International Workshop on Deep-Sea Microbiology,, Mohamed Jebbar, Sep 2022, Plouzane, France Communication dans un congrès hal-04358652v1
New lipids, new membranes and extraordinary routes to adapt to the extremes Philippe Oger Gordon Research Conference on Organic Geochemistry, GRC, Jul 2022, Horlderness, MA, United States Communication dans un congrès hal-04896579v1
Membrane adaptation in the hyperthermophilic and piezophilic archaeon Thermococcus barophilus Philippe Oger 11th Conference on High Pressure Bioscience and Biotechnology, University of Copenhagen, Dept of Food Sciences, Jul 2022, Copenhagen, Denmark Communication dans un congrès hal-04898877v1
Unravelling the mechanisms of adaptation to high pressure in proteins Antonino Caliò,Judith Peters,Philippe Oger 11th International Conference on High Pressure Bioscience and Biotechnology, The Intenational Association of High Pressure Bioscience and Biotechnology, Jul 2022, Copenhagen, France Communication dans un congrès hal-04902408v1
Unraveling the mechanisms of adaptation to high pressure in proteins Antonino Caliò,Philippe Oger,Judith Peters QENS/WINS 2022, A. Arbe and J. Colmenero, May 2022, San Sebastian, Spain Communication dans un congrès hal-04903185v1
Adaptation to the extreme in polyextremophilic archaea Philippe Oger 7th Workshop Deep-Sea Microbiology, LM2E, UMR6197, Sep 2022, Brest, France Communication dans un congrès hal-04896597v1
Uncommon glycerol monoalkyl glycerol tetraethers (GMGT) support membrane adaption in the archaeon Pyrococcus furiosus Maxime Tourte,P. Schaeffer,Vincent Grossi,Philippe Oger 30th International Meeting on Organic Geochemistry (IMOG), The European Association of Organic Geochemistry, Sep 2021, Montpellier, France. pp.1-2, ⟨10.3997/2214-4609.202134189⟩ Communication dans un congrès hal-04895713v1
Molecular bases of proteome adaptation to high-pressure in extremophilic archaea Antonino Caliò,Judith Peters,Philippe Oger The 11th International Conference on High Pressure Bioscience and Biotechnology, University of Copenhaguen, Dept of Food Sciences, Jul 2021, Copenhagen (Online conference), France Communication dans un congrès hal-04895697v1
Apolar polyisoprenoids located in the midplane of the bilayer regulate the response of an archaeal-like membrane to high temperature and pressure Josephine Loricco,Marta Salvador-Castell,Bruno Demé,Judith Peters,Philippe Oger The 11th International Conference on High Pressure Bioscience and Biotechnology (HPBB2021), University of Copenhaguen, Département de Sciences alimentaires, Jul 2021, Copenhague (Online conference), France Communication dans un congrès hal-04895688v1
Design of a fibrous composite material for the retention of heavy metals Alvaro Diaz-Mendoza,Yoann Louis,Philippe Oger,Marie Vandesteene,Adeline Crohareet al. GFP, Nov 2021, LYON, France Communication dans un congrès hal-05041721v1
Design of a fibrous composite material for the retention of heavy metals Alvaro Diaz-Mendoza,Yoann Louis,Philippe . Oger,Marie Vandesteene,Adeline Crohareet al. MACRO 2020, May 2021, JEJU, South Korea Communication dans un congrès hal-05041656v1
High-hydrostatic pressure adaptation resolved by combined physiological and biophysical approaches in piezophilic archaea Philippe Oger 57th EHPRG Meeting on High Pressure Science and Technology Information, The European High Pressure Research Group, Sep 2019, Prague, Czech Republic, Czech Republic Communication dans un congrès hal-04895162v1
Apolar lipids, the molecular toolbox for membrane adaptation to extreme conditions in Archaea Philippe Oger Joint meeting of the DFG Research Unit FOR 1979 and the "9th International Meeting of Biomolecules under Pressure (IMBP)", Roland Winter, Sep 2019, Dortmund Germany, Germany Communication dans un congrès hal-04895179v1
Effects of alcohol addition on a fatty acid membrane Loreto Misuraca,Bruno Demé,Judith Peters,Philippe Oger Bilayer at ILL, Institut Laue-Langevin, Dec 2019, Grenoble, France Communication dans un congrès hal-04895237v1
Apolar lipids, the membrane adaptation toolbox of extremophiles Marta Salvador-Castell,Maksym Golub,Nelli Erwin,Bruno Demé,Nicholas Brookset al. Bilayers at the ILL, Institut Laue-Langevin, Dec 2019, Grenoble, France Communication dans un congrès hal-04895225v1
PROTOMEMBRANES AT THE ORIGIN OF LIFE Loreto Misuraca,Bruno Demé,Judith Peters,Philippe Oger European Conference of Neutron Scattering (ECNS), European Neutron Scattering Association & Kurchatov Institute, Jun 2019, Saint-Petersbourg, Russia Communication dans un congrès hal-04895273v1
Contribution of metagenomics to the study of mineral weathering bacterial communities in forest soils Stéphane S. Uroz,Marc Buée,Aurélie Cébron,Wietse de Boer,Pascale P. Frey-Klettet al. MEM days (Meta’omics of the microbial ecosystems), 2014, Paris, France Communication dans un congrès hal-02796164v1
Combination of culture-independent and dependent approach reveals positive correlation between abundance of Beta-proteobacteria and mineral weathering in nutrient-poor forest soil Cendrella Lepleux,Marie-Pierre M.-P. Turpault,P. Oger,Pascale P. Frey-Klett,Stéphane S. Uroz 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Coppenague, Danemark Communication dans un congrès hal-02745200v1
Identification et suivi des bactéries et gènes impliqués dans l’altération des minéraux et la fertilité des sols forestiers Stéphane S. Uroz,Marie-Pierre M.-P. Turpault,P. Oger,Christelle Collignon,Wietse de Boeret al. Colloque FRB 2011, Sep 2011, Montpellier, France Communication dans un congrès hal-02744770v1
Validity, sensitivity and resolution limit of the PCR-RFLP analysis of the rrs (16S rRNA gene) as a tool to identify soil-borne and plant-associated bacterial populations Philippe Oger,Yves Dessaux,A. Petit,L. Gardan,Charles Manceauet al. Colloque BRG/USTL. Méthodologies de gestion et de conservation des ressources génétiques, Oct 1997, Lille, France Communication dans un congrès hal-02840574v1

Ouvrages (3)

Biology of Archea, Volume 1 Béatrice Clouet-d'Orval,Bruno Franzetti,Philippe Oger ISTE Publications. 1 (1), pp.276, 2025, 978-1-79045-1678-9 Ouvrages hal-04884967v1
Les archées, micro-organismes du troisième domaine du vivant 1 : Découverte, évolution et diversité des archées Béatrice Clouet-d'Orval,Bruno Franzetti,Phil M. Oger ISTE group. ISTE éditions, pp.284, 2024, 978-1-78948-168-6 Ouvrages hal-04632247v1
Les archées, micro-organismes du troisième domaine du vivant 2 : Biologie moléculaire des archées, de la maintenance des génomes à la régulation de l’expression des gènes Béatrice Clouet-d'Orval,Bruno Franzetti,Phil M. Oger ISTE Editions. ISTE Editions, 2024, 9781789481693 Ouvrages hal-04654909v1

Chapitre d'ouvrage (15)

High-Throughput Screening of Fosmid Libraries for Increased Identification of Novel N-Acyl Homoserine Lactone Degrading Enzymes Stéphane Uroz,Phil M. Oger Microbial Environmental Genomics (MEG), 2605, Springer US, pp.227-240, 2023, Methods in Molecular Biology, ⟨10.1007/978-1-0716-2871-3_12⟩ Chapitre d'ouvrage hal-04683698v1
Metabarcoding of the Three Domains of Life in Aquatic Saline Ecosystems Delphine Melayah,Zélia Bontemps,Maxime Bruto,Agnès Nguyen,Phil M. Ogeret al. Génomique environnementale microbienne (MEG), 2605, Springer US, pp.17-35, 2023, Methods in Molecular Biology, ⟨10.1007/978-1-0716-2871-3_2⟩ Chapitre d'ouvrage anses-04559404v1
High-pressure Adaptation of Extremophiles and Biotechnological Applications Marta Salvador-Castell,Phil M. Oger,Judith Peters Physiological and Biotechnological aspects of extremophiles, Elsevier, pp.105-122, 2020, 978-0-12-818322-9. ⟨10.1016/C2018-0-03860-8⟩ Chapitre d'ouvrage hal-02122331v1
High-pressure adaptation of extremophiles and biotechnological applications M. Salvador-Castell,P. Oger,J. Peters Physiological and Biotechnological Aspects of Extremophiles, Elsevier, pp.105-122, 2020, ⟨10.1016/B978-0-12-818322-9.00008-3⟩ Chapitre d'ouvrage hal-03930698v1
Vivre sous pression dans la biosphère profonde Phil M. Oger 101 secrets de l'ADN, 4, CNRS Editions, pp.151-153, 2019, 9782271123237 Chapitre d'ouvrage hal-02122323v1
Probing the Structure and Dynamics of Cells, Cell Components and Endogenous Nanoparticles Under Extreme Conditions with Neutrons Judith Peters,Ruth Prassl,Phil M. Oger Biological, Physical and Technical Basics of Cell Engineering, Springer Singapore, pp.401-420, 2018 Chapitre d'ouvrage hal-02122309v1
Screening for N-AHSL-Based-Signaling Interfering Enzymes Stéphane Uroz,Phil M. Oger METAGENOMICS: METHODS AND PROTOCOLS, 1539 (Chapter 18), Editions Springer, 15 p., 2017, Methods in Molecular Biology, 978-1-4939-6689-9. ⟨10.1007/978-1-4939-6691-2_18⟩ Chapitre d'ouvrage hal-01688921v1
Homeoviscous Adaptation of Membranes in Archaea Phil M. Oger High Pressure Bioscience, pp.383-403, 2015 Chapitre d'ouvrage hal-02122094v1
Petroleum: from formation to microbiology. Bernard Ollivier,Jean Borgomano,Philippe Oger Microbial life in the deep biosphere, De Gruyter, pp.161 -185, 2014 Chapitre d'ouvrage hal-00989881v1
Piezophilic Prokaryotes Daniel Prieur,D. Bartlett,C. Kato,Ph. Oger,Mohamed Jebbar Philippe Sébert. Comparative High Pressure Biology, Science Publishers, pp.285-322, 2010 Chapitre d'ouvrage hal-00620691v1
Screening for N-AHSL-Based-Signaling Interfering Enzymes Stéphane Uroz,Phil M. Oger Metagenomics. Methods in Molecular Biology (Methods and Protocols), pp.203-217, 2010 Chapitre d'ouvrage hal-02122828v1
Impact of the deep biosphere on CO2 storage performance Bénédicte Ménez,Sébastien Dupraz,Emmanuelle Gérard,François Guyot,Céline Rommevauxet al. Geotechnologien Science Reports, 9, pp.150-163, 2007, French-German Symposium on Geological storage of CO2 Chapitre d'ouvrage hal-02122968v1
Métrologie : calibrants de pression pour la gamme 0 - 2 GPA Phil M. Oger,Jean-Claude Chervin,Olivier Grasset,Jean-Marie Perrier-Cornet Outils et méthodes pour la recherche à haute pression, Réseau CNRS des Hautes Pressions, pp.1-30, 2005 Chapitre d'ouvrage hal-02123176v1
Agrobacterium-mediated transformation of Lotus species Phil Oger,Yves Dessaux P.K. Jaiwal, R.P. Singh. Applied Genetics of Leguminosae Biotechnology, Springer, pp.255-281, 2004, Focus on Biotechnology Vol. 10B Chapitre d'ouvrage hal-00134557v1
Quorum-sensing system of Agrobacterium plasmids: Analysis and utility Stephen Farrand,Yinping Qin,Phil M. Oger Methods in Enzymology, pp.452-484, 2002 Chapitre d'ouvrage hal-02123042v1

Brevet (3)

METHOD FOR PRODUCING METHANE GAS Phil M. Oger,Gilles Dromart France, Patent n° : WO2011089151. 2011 Brevet hal-02123181v1
Integrated method of producing calcite and biomass using cyanobacteria for energy valorization and mineral sequestration of co2 Denis Blanchet,Gilles Dromart,F. Haeseler,Phil M. Oger France, Patent n° : US20140099692A1. 2010 Brevet hal-02122741v1
Procédé de production de gaz méthane Phil M. Oger,Gilles Dromart France, N° de brevet: FR 2 955 355. 2010 Brevet hal-02123180v1