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45

Raphaël Lami


Journal articles42 documents

  • Marion Urvoy, Claire Labry, Stéphane L’Helguen, Raphaël Lami. Quorum Sensing Regulates Bacterial Processes That Play a Major Role in Marine Biogeochemical Cycles. Frontiers in Marine Science, Frontiers Media, 2022, 9, pp.834337. ⟨10.3389/fmars.2022.834337⟩. ⟨hal-03813925⟩
  • Mattea Romani, Thomas Warscheid, Lionel Nicole, Lionel Marcon, Patrick Di Martino, et al.. Current and future chemical treatments to fight biodeterioration of outdoor building materials and associated biofilms: moving away from ecotoxic and towards efficient, sustainable solutions. Science of the Total Environment, Elsevier, 2022, 802, pp.149846. ⟨10.1016/j.scitotenv.2021.149846⟩. ⟨hal-03328324⟩
  • Alice M S Rodrigues, Raphaël Lami, Karine Escoubeyrou, Laurent Intertaglia, Clément Mazurek, et al.. Straightforward N -Acyl Homoserine Lactone Discovery and Annotation by LC–MS/MS-based Molecular Networking. Journal of Proteome Research, 2022, 21, pp.635-642. ⟨10.1021/acs.jproteome.1c00849⟩. ⟨hal-03551975⟩
  • Raphaël Lami, Laurent Urios, Maëlle Molmeret, Régis Grimaud. Quorum sensing in biofilms: a key mechanism to target in ecotoxicological studies. Critical Reviews in Microbiology, In press, pp.1-19. ⟨10.1080/1040841X.2022.2142089⟩. ⟨hal-03882166⟩
  • Mattea Romani, Thomas Warscheid, Lionel Nicole, Marcelino T Suzuki, Lionel Marcon, et al.. Current and future chemical treatments to fight biodeterioration of outdoor building materials and associated biofilms: Moving away from ecotoxic and towards efficient, sustainable solutions. Science of the Total Environment, Elsevier, 2022, 802, pp.149846. ⟨10.1016/j.scitotenv.2021.149846⟩. ⟨hal-03373175⟩
  • Haley Flom, Maja Adamska, Raphaël Lami, Eve Gazave, Salvatore d'Aniello, et al.. Digital Marine: An online platform for blended learning in a marine experimental biology module, the Schmid Training Course. BioEssays, Wiley-VCH Verlag, In press, ⟨10.1002/bies.202100264⟩. ⟨hal-03628139⟩
  • Jordan Pinto, Raphaël Lami, Marc Krasovec, Regis Grimaud, Laurent Urios, et al.. Features of the Opportunistic Behaviour of the Marine Bacterium Marinobacter algicola in the Microalga Ostreococcus tauri Phycosphere. Microorganisms, MDPI, 2021, 9 (8), pp.1777. ⟨10.3390/microorganisms9081777⟩. ⟨hal-03348932⟩
  • Mattea Romani, Claire Carrion, Frédéric Fernandez, Philippe Lebaron, Raphaël Lami. Methyl Potassium Siliconate and Siloxane Inhibit the Formation of Multispecies Biofilms on Ceramic Roof Tiles: Efficiency and Comparison of Two Common Water Repellents. Microorganisms, 2021, 9 (2), pp.394. ⟨10.3390/microorganisms9020394⟩. ⟨hal-03148553⟩
  • Marion Urvoy, Raphaël Lami, Catherine Dreanno, David Daudé, Alice M S Rodrigues, et al.. Quorum sensing disruption regulates hydrolytic enzyme and biofilm production in estuarine bacteria. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2021, 23 (11), pp.7183-7200. ⟨10.1111/1462-2920.15775⟩. ⟨hal-03814177⟩
  • Marion Urvoy, Raphaël Lami, Catherine Dreanno, David Daudé, Alice Rodrigues, et al.. Quorum sensing disruption regulates hydrolytic enzyme and biofilm production in estuarine bacteria. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2021, ⟨10.1111/1462-2920.15775⟩. ⟨hal-03437041⟩
  • Marion Urvoy, Raphaël Lami, Catherine Dreanno, Daniel Delmas, Stéphane L'Helguen, et al.. Quorum Sensing Regulates the Hydrolytic Enzyme Production and Community Composition of Heterotrophic Bacteria in Coastal Waters. Frontiers in Microbiology, Frontiers Media, 2021, 12, ⟨10.3389/fmicb.2021.780759⟩. ⟨hal-03510738⟩
  • Anne Tourneroche, Raphaël Lami, Gaëtan Burgaud, Isabelle J. Domart-Coulon, Wei Li, et al.. The Bacterial and Fungal Microbiota of Saccharina latissima (Laminariales, Phaeophyceae). Frontiers in Marine Science, Frontiers Media, 2020, 7, ⟨10.3389/fmars.2020.587566⟩. ⟨mnhn-03089362⟩
  • Thi Phuong Thuy Hoang, Morgane Barthélemy, Raphaël Lami, Didier Stien, Véronique Eparvier, et al.. Annotation and quantification of N-acyl homoserine lactones implied in bacterial quorum sensing by supercritical-fluid chromatography coupled with high-resolution mass spectrometry. Analytical and Bioanalytical Chemistry, 2020, 412 (10), pp.2261-2276. ⟨10.1007/s00216-019-02265-4⟩. ⟨hal-03012250⟩
  • Mahmoud Hayek, Claudine Baraquet, Raphaël Lami, Yves Blache, Maëlle Molmeret. The Marine Bacterium Shewanella woodyi Produces C8-HSL to Regulate Bioluminescence. Microbial ecology, Springer Verlag, 2020, 79 (4), pp.865-881. ⟨10.1007/s00248-019-01454-z⟩. ⟨hal-03603704⟩
  • Claudie Barnier, Camille Clerissi, Raphaël Lami, Laurent Intertaglia, Philippe Lebaron, et al.. Description of Palleronia rufa sp. nov., a biofilm-forming and AHL-producing Rhodobacteraceae, reclassification of Hwanghaeicola aestuarii as Palleronia aestuarii comb. nov., Maribius pontilimi as Palleronia pontilimi comb. nov., Maribius salinus as Palleronia salina comb. nov., Maribius pelagius as Palleronia pelagia comb. nov. and emended description of the genus Palleronia. Systematic and Applied Microbiology, Elsevier, 2020, 43 (1), pp.126018. ⟨10.1016/j.syapm.2019.126018⟩. ⟨hal-02390411⟩
  • Mahmoud Hayek, Claudine Baraquet, Raphaël Lami, Yves Blache, Maëlle Molmeret. The Marine Bacterium Shewanella woodyi Produces C8-HSL to Regulate Bioluminescence. Microbial ecology, Springer Verlag, 2020, 79 (4), pp.865-881. ⟨10.1007/s00248-019-01454-z⟩. ⟨hal-03603623⟩
  • Marine Vallet, Yee-Meng Chong, Anne Tourneroche, Grégory Genta-Jouve, Cédric Hubas, et al.. Novel α-Hydroxy γ-Butenolides of Kelp Endophytes Disrupt Bacterial Cell-to-Cell Signaling. Frontiers in Marine Science, Frontiers Media, 2020, 7, pp.601. ⟨10.3389/fmars.2020.00601⟩. ⟨hal-02909195⟩
  • Natacha Roux, Raphaël Lami, Pauline Salis, Kevin Magré, Pascal Romans, et al.. Sea anemone and clownfish microbiota diversity and variation during the initial steps of symbiosis. Scientific Reports, Nature Publishing Group, 2019, 9, pp.19491. ⟨10.1038/s41598-019-55756-w⟩. ⟨hal-02468924⟩
  • Anne Tourneroche, Raphaël Lami, Cédric Hubas, Elodie Blanchet, Marine Vallet, et al.. Bacterial–Fungal Interactions in the Kelp Endomicrobiota Drive Autoinducer-2 Quorum Sensing. Frontiers in Microbiology, Frontiers Media, 2019, 10, pp.1693. ⟨10.3389/fmicb.2019.01693⟩. ⟨hal-02277573⟩
  • Mattea Romani, Claire Carrion, Frédéric Fernandez, Laurent Intertaglia, David Pecqueur, et al.. High bacterial diversity in pioneer biofilms colonizing ceramic roof tiles. International Biodeterioration and Biodegradation, Elsevier, 2019, 144, pp.104745. ⟨10.1016/j.ibiod.2019.104745⟩. ⟨hal-02262189⟩
  • Léa Girard, Elodie Blanchet, Didier Stien, Julia Baudart, Marcelino Suzuki, et al.. Evidence of a Large Diversity of N-acyl-Homoserine Lactones in Symbiotic Vibrio fischeri Strains Associated with the Squid Euprymna scolopes. Microbes and environments / JSME, 2019, 34 (1), pp.99-103. ⟨10.1264/jsme2.ME18145⟩. ⟨hal-02331764⟩
  • Léa Girard, François Lantoine, Raphaël Lami, Florence Vouve, Marcelino Suzuki, et al.. Genetic diversity and phenotypic plasticity of AHL-mediated Quorum sensing in environmental strains of Vibrio mediterranei. ISME Journal, Nature Publishing Group, 2019, 13 (1), pp.159-169. ⟨10.1038/s41396-018-0260-4⟩. ⟨hal-02909556⟩
  • Margot Doberva, Didier Stien, Jonathan Sorres, Nathalie Hue, Sophie Sanchez-Ferandin, et al.. Large Diversity and Original Structures of Acyl-Homoserine Lactones in Strain MOLA 401, a Marine Rhodobacteraceae Bacterium. Frontiers in Microbiology, 2017, 8, pp.1152. ⟨10.3389/fmicb.2017.01152⟩. ⟨hal-01556563⟩
  • Raphaël Lami, Laura Gabriela Nisembaum, Anne Tourneroche. Pau-Brasil, l’arbre qui donna son nom au Brésil. ESpèces - Revue d’Histoire naturelle , Kyrnos publications, 2017, Étranges insulaires, pp.34. ⟨hal-02906974⟩
  • Marwa Jardak, Faten Abdelli, Rahma Laadhar, Raphaël Lami, Didier Stien, et al.. Evaluation of biofilm-forming ability of bacterial strains isolated from the roof of an old house. Journal of general and applied microbiology, 2017, 63 (3), pp.186-194. ⟨10.2323/jgam.2016.10.005⟩. ⟨hal-02906990⟩
  • Elodie Blanchet, Soizic Prado, Didier Stien, Jocivânia Oliveira da Silva, Yoan Ferandin, et al.. Quorum Sensing and Quorum Quenching in the Mediterranean Seagrass Posidonia oceanica Microbiota. Frontiers in Marine Science, 2017, 4, pp.218. ⟨10.3389/fmars.2017.00218⟩. ⟨hal-02906989⟩
  • Léa Girard, Élodie Blanchet, Laurent Intertaglia, Julia Baudart, Didier Stien, et al.. Characterization of N-Acyl Homoserine Lactones in Vibrio tasmaniensis LGP32 by a Biosensor-Based UHPLC-HRMS/MS Method. Sensors, 2017, 17 (4), pp.906 ⟨10.3390/s17040906⟩. ⟨hal-01513879⟩
  • Josselin Lupette, Raphaël Lami, Marc Krasovec, Nigel Grimsley, Hervé Moreau, et al.. Marinobacter Dominates the Bacterial Community of the Ostreococcus tauri Phycosphere in Culture. Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.1414. ⟨10.3389/fmicb.2016.01414⟩. ⟨hal-01373902⟩
  • Dominique Boeuf, Raphaël Lami, Emelyne Cunnington, Christian Jeanthon. Summer Abundance and Distribution of Proteorhodopsin Genes in the Western Arctic Ocean. Frontiers in Microbiology, Frontiers Media, 2016, 7, ⟨10.3389/fmicb.2016.01584⟩. ⟨hal-02130561⟩
  • Jean-Luc Rolland, Didier Stien, Sophie Sanchez-Ferandin, Raphaël Lami. Quorum sensing and quorum quenching in the phycosphere of phytoplankton: a case of chemical interactions in ecology. Journal of Chemical Ecology, 2016, 42 (12), pp.1201-1211. ⟨10.1007/s10886-016-0791-y⟩. ⟨hal-01472696⟩
  • Dominique Boeuf, Raphaël Lami, Emelyne Cunnington, Christian Jeanthon. Summer Abundance and Distribution of Proteorhodopsin Genes in the Western Arctic Ocean. Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.1584. ⟨10.3389/fmicb.2016.01584⟩. ⟨hal-01391017⟩
  • Raphaël Lami, Rémi Salaün. La forêt de Fontainebleau: quand la biodiversité inspire les artistes. ESpèces - Revue d’Histoire naturelle , Kyrnos publications, 2016, Terres et mers australes. Vivre dans un monde extrême. ⟨hal-02906979⟩
  • Caroline Sauret, Marc Tedetti, C. Guigue, Chloé Dumas, Raphaël Lami, et al.. Influence of PAHs among other coastal environmental variables on total and PAH-degrading bacterial communities. Environmental Science and Pollution Research, Springer Verlag, 2016, 23 (5), pp.4242-4256. ⟨10.1007/s11356-015-4768-0⟩. ⟨hal-01278782⟩
  • Margot Doberva, Sophie Sanchez-Ferandin, Eve Toulza, Philippe Lebaron, Raphaël Lami. Diversity of quorum sensing autoinducer synthases in the Global Ocean Sampling metagenomic database. Aquatic Microbial Ecology, Inter Research, 2015, 74 (2), pp.107-119. ⟨10.3354/ame01734⟩. ⟨hal-01141144⟩
  • Margot Doberva, Sophie Sanchez-Ferandin, Yoan Ferandin, Laurent Intertaglia, Julie Croué, et al.. Genome Sequence of the Sponge-Associated Ruegeria halocynthiae Strain MOLA R1/13b, a Marine Roseobacter with Two Quorum-Sensing-Based Communication Systems. Genome Announcements, American Society for Microbiology, 2014, 2 (5), pp.e00998-14. ⟨10.1128/genomeA.00998-14⟩. ⟨hal-01228529⟩
  • Margot Doberva, Sophie Sanchez-Ferandin, Yoan Ferandin, Laurent Intertaglia, Fabien Joux, et al.. Genome Sequence of Maribius sp. Strain MOLA 401, a Marine Roseobacter with a Quorum-Sensing Cell-Dependent Physiology. Genome Announcements, 2014, 2 (5), pp.e00997-14. ⟨10.1128/genomeA.00997-14⟩. ⟨hal-01214297⟩
  • Raphaël Lami, David L. Kirchman. Diurnal expression of SAR11 proteorhodopsin and 16S rRNA genes in coastal North Atlantic waters. Aquatic Microbial Ecology, Inter Research, 2014, 73 (3), pp.185-194. ⟨10.3354/ame01716⟩. ⟨hal-02906988⟩
  • Raphaël Lami, L. Camille Jones, Matthew Cottrell, Brandon J. Lafferty, M. Ginder-Vogel, et al.. Arsenite modifies structure of soil microbial communities and arsenite oxidization potential. FEMS Microbiology Ecology, Wiley-Blackwell, 2013, 84 (2), pp.270-279. ⟨10.1111/1574-6941.12061⟩. ⟨hal-02909471⟩
  • D Lamy, P de Carvalho-Maalouf, M. T. Cottrell, Raphaël Lami, P. Catala, et al.. Seasonal dynamics of aerobic anoxygenic phototrophs in a Mediterranean coastal lagoon. Aquatic Microbial Ecology, Inter Research, 2011, 62 (2), pp.153-163. ⟨10.3354/ame01467⟩. ⟨hal-02906986⟩
  • Raphaël Lami, Jf Ghiglione, Y. Desdevises, N West, P. Lebaron. Annual patterns of presence and activity of marine bacteria monitored by 16S rDNA–16S rRNA fingerprints in the coastal NW Mediterranean Sea. Aquatic Microbial Ecology, Inter Research, 2009, 54, pp.199-210. ⟨10.3354/ame01264⟩. ⟨hal-02906983⟩
  • Raphaël Lami, Z Âuperová, J. Ras, P. Lebaron, M Koblíïek. Distribution of free-living and particle-attached aerobic anoxygenic phototrophic bacteria in marine environments. Aquatic Microbial Ecology, Inter Research, 2009, 55, pp.31-38. ⟨10.3354/ame01282⟩. ⟨hal-02906984⟩
  • I Obernosterer, P Catala, R Lami, J Caparros, J Ras, et al.. Biochemical characteristics and bacterial community structure of the sea surface microlayer in the South Pacific Ocean. Biogeosciences, European Geosciences Union, 2008. ⟨hal-01248038⟩

Book sections2 documents

  • Raphaël Lami. Quorum sensing in marine biofilms and environments. Academic Press. Quorum Sensing, pp.55-96, 2019, ⟨10.1016/B978-0-12-814905-8.00003-4⟩. ⟨hal-02906976⟩
  • Isabelle Arzul, Salvador Bailon, David Bass, Philippe Béarez, Elodie Blanchard, et al.. Biodiversité, évolution et fonctionnement des écosystèmes : Prospectives de l’Institut Ecologie et Environnement du CNRS,. Crochet P.-A.; Rasplus J.-Y.; Selosse M.-A. Les Cahiers des prospectives, hors série, cnrs, pp.25-33., 2017, Les Cahiers des prospectives. ⟨halshs-03847162⟩

Other publications1 document

  • I. Obernosterer, P. Catala, Raphaël Lami, J. Caparros, J. Ras, et al.. Biochemical characteristics and bacterial community structure of the sea surface microlayer in the South Pacific Ocean. 2007, pp.2809-2844. ⟨hal-00330262⟩