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Raphaël LAMI



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Quorum Sensing Regulates Bacterial Processes That Play a Major Role in Marine Biogeochemical Cycles

Marion Urvoy , Claire Labry , Stéphane l'Helguen , Raphaël Lami
Frontiers in Marine Science, 2022, 9, pp.834337. ⟨10.3389/fmars.2022.834337⟩
Journal articles hal-03813925v1
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Straightforward N -Acyl Homoserine Lactone Discovery and Annotation by LC–MS/MS-based Molecular Networking

Alice M S Rodrigues , Raphaël Lami , Karine Escoubeyrou , Laurent Intertaglia , Clément Mazurek
Journal of Proteome Research, 2022, 21, pp.635-642. ⟨10.1021/acs.jproteome.1c00849⟩
Journal articles hal-03551975v1

Quorum sensing in biofilms: a key mechanism to target in ecotoxicological studies

Raphaël Lami , Laurent Urios , Maëlle Molmeret , Régis Grimaud
Critical Reviews in Microbiology, 2022, 49 (6), pp.786-804. ⟨10.1080/1040841X.2022.2142089⟩
Journal articles hal-03882166v1
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A history of teaching in a marine laboratory, the Laboratoire Arago of Banyuls-sur-Mer

Raphaël Lami
Vie et Milieu / Life & Environment, 2022, 72 (3-4), pp.151-178. ⟨10.57890/VIEMILIEU/2022.72.3/4:151-178⟩
Journal articles hal-04183689v1
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Current and future chemical treatments to fight biodeterioration of outdoor building materials and associated biofilms: moving away from ecotoxic and towards efficient, sustainable solutions

Mattea Romani , Thomas Warscheid , Lionel Nicole , Lionel Marcon , Patrick Di Martino
Science of the Total Environment, 2022, 802, pp.149846. ⟨10.1016/j.scitotenv.2021.149846⟩
Journal articles hal-03328324v1

Impact of IBD-Associated Dysbiosis on Bacterial Quorum Sensing Mediated by Acyl-Homoserine Lactone in Human Gut Microbiota

Nathan Grellier , Marcelino Suzuki , Loic Brot , Alice Rodrigues , Lydie Humbert
International Journal of Molecular Sciences, 2022, 23 (23), pp.15404. ⟨10.3390/ijms232315404⟩
Journal articles hal-03915691v1
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Digital Marine: An online platform for blended learning in a marine experimental biology module, the Schmid Training Course

Haley Flom , Maja Adamska , Raphaël Lami , Eve Gazave , Salvatore d'Aniello
BioEssays, inPress, ⟨10.1002/bies.202100264⟩
Journal articles hal-03628139v1
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Features of the Opportunistic Behaviour of the Marine Bacterium Marinobacter algicola in the Microalga Ostreococcus tauri Phycosphere

Jordan Pinto , Raphaël Lami , Marc Krasovec , Regis Grimaud , Laurent Urios
Microorganisms, 2021, 9 (8), pp.1777. ⟨10.3390/microorganisms9081777⟩
Journal articles hal-03348932v1
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Quorum Sensing Regulates the Hydrolytic Enzyme Production and Community Composition of Heterotrophic Bacteria in Coastal Waters

Marion Urvoy , Raphaël Lami , Catherine Dreanno , Daniel Delmas , Stéphane L'Helguen
Frontiers in Microbiology, 2021, 12, pp.780759. ⟨10.3389/fmicb.2021.780759⟩
Journal articles hal-03510738v1
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Methyl Potassium Siliconate and Siloxane Inhibit the Formation of Multispecies Biofilms on Ceramic Roof Tiles: Efficiency and Comparison of Two Common Water Repellents

Mattea Romani , Claire Carrion , Frédéric Fernandez , Philippe Lebaron , Raphaël Lami
Microorganisms, 2021, 9 (2), pp.394. ⟨10.3390/microorganisms9020394⟩
Journal articles hal-03148553v1
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Quorum sensing disruption regulates hydrolytic enzyme and biofilm production in estuarine bacteria

Marion Urvoy , Raphaël Lami , Catherine Dreanno , David Daudé , Alice M S Rodrigues
Environmental Microbiology, 2021, 23 (11), pp.7183-7200. ⟨10.1111/1462-2920.15775⟩
Journal articles hal-03814177v1
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Description of Palleronia rufa sp. nov., a biofilm-forming and AHL-producing Rhodobacteraceae, reclassification of Hwanghaeicola aestuarii as Palleronia aestuarii comb. nov., Maribius pontilimi as Palleronia pontilimi comb. nov., Maribius salinus as Palleronia salina comb. nov., Maribius pelagius as Palleronia pelagia comb. nov. and emended description of the genus Palleronia

Claudie Barnier , Camille Clerissi , Raphaël Lami , Laurent Intertaglia , Philippe Lebaron
Systematic and Applied Microbiology, 2020, 43 (1), pp.126018. ⟨10.1016/j.syapm.2019.126018⟩
Journal articles hal-02390411v1
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Novel α-Hydroxy γ-Butenolides of Kelp Endophytes Disrupt Bacterial Cell-to-Cell Signaling

Marine Vallet , Yee-Meng Chong , Anne Tourneroche , Grégory Genta-Jouve , Cédric Hubas
Frontiers in Marine Science, 2020, 7, pp.601. ⟨10.3389/fmars.2020.00601⟩
Journal articles hal-02909195v1

The Bacterial and Fungal Microbiota of Saccharina latissima (Laminariales, Phaeophyceae)

Anne Tourneroche , Raphaël Lami , Gaëtan Burgaud , Isabelle J. Domart-Coulon , Wei Li
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.587566⟩
Journal articles mnhn-03089362v1
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Annotation and quantification of N-acyl homoserine lactones implied in bacterial quorum sensing by supercritical-fluid chromatography coupled with high-resolution mass spectrometry

Thi Phuong Thuy Hoang , Morgane Barthélemy , Raphaël Lami , Didier Stien , Véronique Eparvier
Analytical and Bioanalytical Chemistry, 2020, 412 (10), pp.2261-2276. ⟨10.1007/s00216-019-02265-4⟩
Journal articles hal-03012250v1

The Marine Bacterium Shewanella woodyi Produces C8-HSL to Regulate Bioluminescence

Mahmoud Hayek , Claudine Baraquet , Raphaël Lami , Yves Blache , Maëlle Molmeret
Microbial ecology, 2020, 79 (4), pp.865-881. ⟨10.1007/s00248-019-01454-z⟩
Journal articles hal-03603623v1
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Sea anemone and clownfish microbiota diversity and variation during the initial steps of symbiosis

Natacha Roux , Raphaël Lami , Pauline Salis , Kevin Magré , Pascal Romans
Scientific Reports, 2019, 9 (1), pp.19491. ⟨10.1038/s41598-019-55756-w⟩
Journal articles hal-02468924v1
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High bacterial diversity in pioneer biofilms colonizing ceramic roof tiles

Mattea Romani , Claire Carrion , Frédéric Fernandez , Laurent Intertaglia , David Pecqueur
International Biodeterioration and Biodegradation, 2019, 144, pp.104745. ⟨10.1016/j.ibiod.2019.104745⟩
Journal articles hal-02262189v1
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Bacterial–Fungal Interactions in the Kelp Endomicrobiota Drive Autoinducer-2 Quorum Sensing

Anne Tourneroche , Raphaël Lami , Cédric Hubas , Elodie Blanchet , Marine Vallet
Frontiers in Microbiology, 2019, 10, pp.1693. ⟨10.3389/fmicb.2019.01693⟩
Journal articles hal-02277573v1
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Genetic diversity and phenotypic plasticity of AHL-mediated Quorum sensing in environmental strains of Vibrio mediterranei

Léa Girard , François Lantoine , Raphaël Lami , Florence Vouve , Marcelino Suzuki
The International Society of Microbiologial Ecology Journal, 2019, 13 (1), pp.159-169. ⟨10.1038/s41396-018-0260-4⟩
Journal articles hal-02909556v1
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Evidence of a Large Diversity of N-acyl-Homoserine Lactones in Symbiotic Vibrio fischeri Strains Associated with the Squid Euprymna scolopes

Léa Girard , Elodie Blanchet , Didier Stien , Julia Baudart , Marcelino Suzuki
Microbes and environments / JSME, 2019, 34 (1), pp.99-103. ⟨10.1264/jsme2.ME18145⟩
Journal articles hal-02331764v1
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Evaluation of biofilm-forming ability of bacterial strains isolated from the roof of an old house

Marwa Jardak , Faten Abdelli , Rahma Laadhar , Raphaël Lami , Didier Stien
Journal of general and applied microbiology, 2017, 63 (3), pp.186-194. ⟨10.2323/jgam.2016.10.005⟩
Journal articles hal-02906990v1
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Pau-Brasil, l’arbre qui donna son nom au Brésil

Raphaël Lami , Laura Gabriela Nisembaum , Anne Tourneroche
ESpèces - Revue d’Histoire naturelle , 2017, Étranges insulaires, 24, pp.34
Journal articles hal-02906974v1
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Characterization of N-Acyl Homoserine Lactones in Vibrio tasmaniensis LGP32 by a Biosensor-Based UHPLC-HRMS/MS Method

Léa Girard , Élodie Blanchet , Laurent Intertaglia , Julia Baudart , Didier Stien
Sensors, 2017, 17 (4), pp.906 ⟨10.3390/s17040906⟩
Journal articles hal-01513879v1
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Large Diversity and Original Structures of Acyl-Homoserine Lactones in Strain MOLA 401, a Marine Rhodobacteraceae Bacterium

Margot Doberva , Didier Stien , Jonathan Sorres , Nathalie Hue , Sophie Sanchez-Ferandin
Frontiers in Microbiology, 2017, 8, pp.1152. ⟨10.3389/fmicb.2017.01152⟩
Journal articles hal-01556563v1
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Quorum Sensing and Quorum Quenching in the Mediterranean Seagrass Posidonia oceanica Microbiota

Elodie Blanchet , Soizic Prado , Didier Stien , Jocivânia Oliveira da Silva , Yoan Ferandin
Frontiers in Marine Science, 2017, 4, pp.218. ⟨10.3389/fmars.2017.00218⟩
Journal articles hal-02906989v1
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Marinobacter Dominates the Bacterial Community of the Ostreococcus tauri Phycosphere in Culture

Josselin Lupette , Raphaël Lami , Marc Krasovec , Nigel Grimsley , Hervé Moreau
Frontiers in Microbiology, 2016, 7, pp.1414. ⟨10.3389/fmicb.2016.01414⟩
Journal articles hal-01373902v1
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Quorum sensing and quorum quenching in the phycosphere of phytoplankton: a case of chemical interactions in ecology

Jean-Luc Rolland , Didier Stien , Sophie Sanchez-Ferandin , Raphaël Lami
Journal of Chemical Ecology, 2016, 42 (12), pp.1201-1211. ⟨10.1007/s10886-016-0791-y⟩
Journal articles hal-01472696v1

Influence of PAHs among other coastal environmental variables on total and PAH-degrading bacterial communities

Caroline Sauret , Marc Tedetti , C. Guigue , Chloé Dumas , Raphaël Lami
Environmental Science and Pollution Research, 2016, 23 (5), pp.4242-4256. ⟨10.1007/s11356-015-4768-0⟩
Journal articles hal-01278782v1
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Summer Abundance and Distribution of Proteorhodopsin Genes in the Western Arctic Ocean

Dominique Boeuf , Raphaël Lami , Emelyne Cunnington , Christian Jeanthon
Frontiers in Microbiology, 2016, 7, pp.1584. ⟨10.3389/fmicb.2016.01584⟩
Journal articles hal-01391017v1
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La forêt de Fontainebleau: quand la biodiversité inspire les artistes

Raphaël Lami , Rémi Salaün
ESpèces - Revue d’Histoire naturelle , 2016, Terres et mers australes. Vivre dans un monde extrême, 21
Journal articles hal-02906979v1
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Diversity of quorum sensing autoinducer synthases in the Global Ocean Sampling metagenomic database

Margot Doberva , Sophie Sanchez-Ferandin , Eve Toulza , Philippe Lebaron , Raphaël Lami
Aquatic Microbial Ecology, 2015, 74 (2), pp.107-119. ⟨10.3354/ame01734⟩
Journal articles hal-01141144v1
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Diurnal expression of SAR11 proteorhodopsin and 16S rRNA genes in coastal North Atlantic waters

Raphaël Lami , David L. Kirchman
Aquatic Microbial Ecology, 2014, 73 (3), pp.185-194. ⟨10.3354/ame01716⟩
Journal articles hal-02906988v1
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Genome Sequence of the Sponge-Associated Ruegeria halocynthiae Strain MOLA R1/13b, a Marine Roseobacter with Two Quorum-Sensing-Based Communication Systems

Margot Doberva , Sophie Sanchez-Ferandin , Yoan Ferandin , Laurent Intertaglia , Julie Croué
Genome Announcements, 2014, 2 (5), pp.e00998-14. ⟨10.1128/genomeA.00998-14⟩
Journal articles hal-01228529v1
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Genome Sequence of Maribius sp. Strain MOLA 401, a Marine Roseobacter with a Quorum-Sensing Cell-Dependent Physiology

Margot Doberva , Sophie Sanchez-Ferandin , Yoan Ferandin , Laurent Intertaglia , Fabien Joux
Genome Announcements, 2014, 2 (5), pp.e00997-14. ⟨10.1128/genomeA.00997-14⟩
Journal articles hal-01214297v1

Arsenite modifies structure of soil microbial communities and arsenite oxidization potential

Raphaël Lami , L. Camille Jones , Matthew Cottrell , Brandon J. Lafferty , M. Ginder-Vogel
FEMS Microbiology Ecology, 2013, 84 (2), pp.270-279. ⟨10.1111/1574-6941.12061⟩
Journal articles hal-02909471v1
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Seasonal dynamics of aerobic anoxygenic phototrophs in a Mediterranean coastal lagoon

D Lamy , P de Carvalho-Maalouf , M. T. Cottrell , Raphaël Lami , P. Catala
Aquatic Microbial Ecology, 2011, 62 (2), pp.153-163. ⟨10.3354/ame01467⟩
Journal articles hal-02906986v1
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Annual patterns of presence and activity of marine bacteria monitored by 16S rDNA–16S rRNA fingerprints in the coastal NW Mediterranean Sea

Raphaël Lami , Jf Ghiglione , Y. Desdevises , N West , P. Lebaron
Aquatic Microbial Ecology, 2009, 54, pp.199-210. ⟨10.3354/ame01264⟩
Journal articles hal-02906983v1
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Distribution of free-living and particle-attached aerobic anoxygenic phototrophic bacteria in marine environments

Raphaël Lami , Z Âuperová , J. Ras , P. Lebaron , M Koblíïek
Aquatic Microbial Ecology, 2009, 55, pp.31-38. ⟨10.3354/ame01282⟩
Journal articles hal-02906984v1
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Biochemical characteristics and bacterial community structure of the sea surface microlayer in the South Pacific Ocean

I. Obernosterer , P. Catala , R. Lami , J. Caparros , J. Ras
Biogeosciences, 2008, 5 (3), pp.693-705. ⟨10.5194/bg-5-693-2008⟩
Journal articles hal-01248038v1

Comment conduire la lutte antifouling de manière durable et écologique ? Un enjeu majeur pour l'avenir des océans.

Raphaël Lami
Christophe Prazuck. 30 questions sur l’océan: La Sorbonne et la mer, Sorbonne, 2022, Sorbonne Essais, 979-10-231-0734-0
Book sections hal-03915702v1
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Marine Bacterial Models for Experimental Biology

Raphaël Lami , Regis. Grimaud , Sophie Sanchez-Brosseau , Christophe Six , François Thomas
Handbook of Marine Model Organisms in Experimental Biology, 1, CRC Press, pp.1-26, 2021, ⟨10.1201/9781003217503-1⟩
Book sections hal-04059671v2
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Quorum sensing in marine biofilms and environments

Raphaël Lami
Academic Press. Quorum Sensing, pp.55-96, 2019, ⟨10.1016/B978-0-12-814905-8.00003-4⟩
Book sections hal-02906976v1

Biodiversité, évolution et fonctionnement des écosystèmes

Isabelle Arzul , Salvador Bailon , David Bass , Pierre Boudry , Philippe Béarez
Crochet P.-A.; Rasplus J.-Y.; Selosse M.-A. Les Cahiers des prospectives, hors série, cnrs, pp.25-33., 2017, Les Cahiers des prospectives
Book sections halshs-03847162v1