Sébastien Aubourg INRAE Senior Scientist

Publications

Article dans une revue (72)

Assembly and annotation of the 'Golden Delicious' Doubled-Haploid GDDH18 apple genome Marine Salson,Christelle Lalanne,Maryline Cournol,Sylvain Hanteville,Damien Hinsingeret al. G3, 2026, ⟨10.1093/g3journal/jkag104/8662901⟩ Article dans une revue hal-05606946v1
Misannotated domains in plant databases: lessons from ‘PIPLC Y-box-containing’ proteins Lucas Amokrane,Sébastien Aubourg,Eric Ruelland Trends in Plant Science, In press, ⟨10.1016/j.tplants.2026.04.005⟩ Article dans une revue hal-05604494v1
Antimicrobial Peptides as Part of the Arsenal of Constitutive and Inducible Seed Defences in Tomato Seed Exudates Against Pathogens Łukasz P Tarkowski,Benjamin Hubert,Muriel Marchi,Camille Tranchant,Stéphanie Boutetet al. Molecular Plant Pathology, 2025, 26 (10), ⟨10.1111/mpp.70164⟩ Article dans une revue hal-05361526v1
Phytocytokine genes newly discovered in Malus domestica and their regulation in response to Erwinia amylovora and acibenzolar‐S‐methyl Marie‐charlotte Guillou,Matthieu Gaucher,Emilie Vergne,Jean-Pierre Renou,Marie-Noëlle Brissetet al. Plant Genome, 2025, 18, pp.e20540. ⟨10.1002/tpg2.20540⟩ Article dans une revue hal-05206927v1
Subtilase-mediated biogenesis of the expanded family of SERINE RICH ENDOGENOUS PEPTIDES Huanjie Yang,Xeniya Kim,Jan Skłenar,Sébastien Aubourg,Gloria Sancho-Andréset al. Nature Plants, 2023, 9 (12), pp.2085-2094. ⟨10.1038/s41477-023-01583-x⟩ Article dans une revue hal-04394015v1
SCOOP12 peptide acts on ROS homeostasis to modulate cell division and elongation in Arabidopsis primary root Marie-Charlotte Guillou,Emilie Vergne-Gaillard,Sophie Aligon,Sandra Pelletier,Fabienne Simonneauet al. Journal of Experimental Botany, 2022, pp.jxb/erac240. ⟨10.1093/jxb/erac240⟩ Article dans une revue hal-03726020v1
The MIK2/SCOOP Signaling System Contributes to Arabidopsis Resistance Against Herbivory by Modulating Jasmonate and Indole Glucosinolate Biosynthesis Elia Stahl,Angel Fernandez Martin,Gaétan Glauser,Marie-Charlotte Guillou,Sébastien Aubourget al. Frontiers in Plant Science, 2022, 13, pp.852808. ⟨10.3389/fpls.2022.852808⟩ Article dans une revue hal-03701614v1
The PROSCOOP10 Gene Encodes Two Extracellular Hydroxylated Peptides and Impacts Flowering Time in Arabidopsis Marie-Charlotte Guillou,Thierry Balliau,Emilie Vergne,Hervé Canut,Josiane Chourréet al. Plants, 2022, 11 (24), pp.3554. ⟨10.3390/plants11243554⟩ Article dans une revue hal-03915560v2
Correction to: An Erwinia amylovora inducible promoter for improvement of apple fire blight resistance Matthieu Gaucher,Laura Righetti,Sébastien Aubourg,Thomas Duge de Bernonville,Marie-Noëlle Brissetet al. Plant Cell Reports, 2022, 41, pp.1789. ⟨10.1007/s00299-022-02887-6⟩ Article dans une revue hal-05153564v1
An Erwinia amylovora inducible promoter for improvement of apple fire blight resistance Matthieu Gaucher,Laura Righetti,Sébastien Aubourg,Thomas Duge de Bernonville,Marie-Noëlle Brissetet al. Plant Cell Reports, 2022, 41, pp.1499-1513. ⟨10.1007/s00299-022-02869-8⟩ Article dans une revue hal-03656697v1
Current status of the multinational Arabidopsis community Keith Adams,Wagner Araújo,Sebastien Aubourg,Sacha Baginsky,Erica Bakkeret al. Plant Direct, 2020, 4 (7), pp.e00248. ⟨10.1002/pld3.248⟩ Article dans une revue hal-02927028v1
An &lt;em&gt;Erwinia amylovora&lt;/em&gt; inducible promoter for intragenic improvement of apple fire blight resistance Matthieu Gaucher,Laura Righetti,Sébastien Aubourg,Thomas Duge de Bernonville,Marie-Noëlle Brissetet al. BioRxiv, 2019, ⟨10.1101/767772⟩ Article dans une revue hal-02624779v1
The SCOOP12 peptide regulates defense response and root elongation in Arabidopsis thaliana Kay Gully,Sandra Pelletier,Marie-Charlotte Guillou,Marina Ferrand,Sophie Aligonet al. Journal of Experimental Botany, 2019, 70 (4), pp.1349-1365. ⟨10.1093/jxb/ery454⟩ Article dans une revue hal-02118952v1
A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits L. Hibrand Saint-Oyant,T. Ruttink,L. Hamama,I. Kirov,D. Lakhwaniet al. Nature Plants, 2018, 4 (7), pp.473 - 484. ⟨10.1038/s41477-018-0166-1⟩ Article dans une revue hal-01873309v1
Acibenzolar-S-Methyl Reprograms Apple Transcriptome Toward Resistance to Rosy Apple Aphid Romain Warneys,Matthieu Gaucher,Philippe Robert,Sophie Aligon,Sylvia Antonet al. Frontiers in Plant Science, 2018, 9, pp.1795. ⟨10.3389/fpls.2018.01795⟩ Article dans une revue hal-02102171v1
Identification of candidate genes at the Dp-fl locus conferring resistance against the rosy apple aphid Dysaphis plantaginea Michela Dall’agata,Giulia Pagliarani,S. Padmarasu,Michela Troggio,Luca Biancoet al. Tree Genetics and Genomes, 2018, 14 (1), pp.12. ⟨10.1007/s11295-018-1227-3⟩ Article dans une revue hal-02516684v1
Large scale study of anti-sense regulation by differential network analysis Marc Legeay,Sébastien Aubourg,Jean-Pierre Renou,Béatrice Duval BMC Systems Biology, 2018, 12 (S5), pp.95. ⟨10.1186/s12918-018-0613-7⟩ Article dans une revue hal-02516677v1
A high-quality sequence of Rosa chinensis to elucidate genome structure and ornamental traits Laurence Hibrand-Saint Oyant,Tom Ruttink,Latifa Hamama,Ilya Kirov,Deepika Lakhwaniet al. Nature Plants, 2018, 4, pp.473-484. ⟨10.1101/254102⟩ Article dans une revue hal-02516576v1
High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development Nicolas Daccord,Jean-Marc Celton,G. Linsmith,C. Becker,Nathalie Choisneet al. Nature Genetics, 2017, 49 (7), pp.1099-1108. ⟨10.1038/ng.3886⟩ Article dans une revue hal-01602554v1
Genome-Wide Association Mapping of Flowering and Ripening Periods in Apple Jorge Urrestarazu,Hélène Muranty,Caroline Denancé,Diane Leforestier,Elisa Ravonet al. Frontiers in Plant Science, 2017, 8 (8), pp.1923. ⟨10.3389/fpls.2017.01923⟩ Article dans une revue (article de synthèse) hal-01905260v1
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis Guillem Rigaill,Sandrine Balzergue,Véronique Brunaud,Eddy Blondet,Andrea Rauet al. Briefings in Bioinformatics, 2016, 19 (1), pp.65-76. ⟨10.1093/bib/bbw092⟩ Article dans une revue hal-01595551v1
In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs Angel Martinez de Alba,Anna Beatriz Moreno,Marc Gabriel,Allison Mallory,Aurélie Christet al. Nucleic Acids Research, 2015, 43 (5), pp.2902-2913. ⟨10.1093/nar/gkv119⟩ Article dans une revue hal-01204176v1
Identifying new sex-linked genes through BAC sequencing in the dioecious plant &lt;em&gt;Silene latifolia&lt;/em&gt; Nicolas Blavet,Hana Blavet,Aline Muyle,Jos Käfer,Radim Ceganet al. BMC Genomics, 2015, 16, pp.546. ⟨10.1186/s12864-015-1698-7⟩ Article dans une revue hal-02637603v1
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response Rim Zaag,Jean-Philippe Tamby,Cecile Guichard,Zakia Tariq,Guillem Rigaillet al. Nucleic Acids Research, 2015, 43 (Database issue), pp.D1010-D1017. ⟨10.1093/nar/gku1155⟩ Article dans une revue hal-01137554v1
Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences Nicolas Frei Dit Frey,Anna Victoria Garcia,Jean Bigeard,Rim Zaag,Eduardo Buesoet al. Genome Biology, 2014, 15 (6), pp.R87. ⟨10.1186/gb-2014-15-6-r87⟩ Article dans une revue hal-02631808v1
Widespread anti-sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post-transcriptional control Jean-Marc Celton,Sylvain Gaillard,Maryline Bruneau,Sandra Pelletier,Sebastien Aubourget al. New Phytologist, 2014, 203 (1), pp.287-299. ⟨10.1111/nph.12787⟩ Article dans une revue hal-01209978v1
The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana Heike Lange,Hélène Zuber,François M. Sement,Johanna Chicher,Lauriane Kuhnet al. PLoS Genetics, 2014, 10 (8), pp.e1004564. ⟨10.1371/journal.pgen.1004564⟩ Article dans une revue hal-01197631v1
Genetic dissection of a TIR-NB-LRR locus from the wild North American grapevine species Muscadinia rotundifolia identifies paralogous genes conferring resistance to major fungal and oomycete pathogens in cultivated grapevine. Angela Feechan,Claire Anderson,Laurent Torregrosa,Angelica Jermakow,Pere Mestreet al. The Plant Journal, 2013, 76 (4), pp.661-674. ⟨10.1111/tpj.12327⟩ Article dans une revue hal-01268090v1
Plant Protein Interactomes Pascal Braun,Sebastien S. Aubourg,Jelle van Leene,Geert de Jaeger,Claire Lurin Annual Review of Plant Biology, 2013, 64, pp.161 - 187. ⟨10.1146/annurev-arplant-050312-120140⟩ Article dans une revue hal-02647686v1
Structural, functional and evolutionary analysis of the unusually large stilbene synthase gene family in grapevine (Vitis vinifera) C. Parage,R. Tavares,S. Réty,R. Baltenweck-Guyot,A. Poutaraudet al. Plant Physiology, 2012, 160, pp.1407-1419 Article dans une revue hal-00753657v1
Structural, Functional, and Evolutionary Analysis of the Unusually Large Stilbene Synthase Gene Family in Grapevine Claire Parage,Raquel Tavares,Stéphane Réty,Raymonde Baltenweck-Guyot,Anne A. Poutaraud Naidenovet al. Plant Physiology, 2012, 160, pp.1407-1419 Article dans une revue hal-02642825v1
Exploration of plant genomes in the FLAGdb++ environment Sandra S. Derozier,Franck F. Samson,Jean-Philippe Tamby,Cecile C. Guichard,Veronique V. Brunaudet al. Plant Methods, 2011, 7 (8), 10 p. ⟨10.1186/1746-4811-7-8⟩ Article dans une revue hal-02652189v1
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis François Roudier,Ikhlak I. Ahmed,Caroline C. Berard,Alexis A. Sarazin,Tristan Mary-Huardet al. EMBO Journal, 2011, 30 (10), pp.1928 - 1938. ⟨10.1038/emboj.2011.103⟩ Article dans une revue hal-00999846v1
Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome Caroline Berard,Marie-Laure Magniette,Veronique Brunaud,Sebastien Aubourg,Stephane Robin Statistical Applications in Genetics and Molecular Biology, 2011, 10 (1), pp.50. ⟨10.2202/1544-6115.1692⟩ Article dans une revue hal-01190201v1
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis François Roudier,Ikhlak Ahmed,Caroline Bérard,Alexis Sarazin,Tristan Mary-Huardet al. The EMBO Journal, 2011, 30 (10), pp.1928-1938. ⟨10.1038/emboj.2011.103⟩ Article dans une revue hal-04383147v1
Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assays Diane M. Martin,Sebastien S. Aubourg,Marina B Schouwey,Laurent Daviet,Michel Schalket al. BMC Plant Biology, 2010, 10 (226), pp.10. ⟨10.1186/1471-2229-10-226⟩ Article dans une revue hal-02663636v1
Sélection de variables pour la classification par mélanges gaussiens pour prédire la fonction des gènes orphelins Cathy Maugis,Marie-Laure Martin-Magniette,Jean-Philippe Tamby,Jean-Pierre Renou,Alain Lecharnyet al. La revue MODULAD, 2009, 40, pp.69-80 Article dans une revue hal-01197529v1
Contrasted Microcolinearity and Gene Evolution Within a Homoeologous Region of Wheat and Barley Species Nathalie Chantret,Jérôme Salse,François Sabot,Arnaud Bellec,Bastien Laubinet al. Journal of Molecular Evolution, 2008, 66 (2), pp.138-150. ⟨10.1007/s00239-008-9066-8⟩ Article dans une revue istex hal-04198542v1
Contrasted microcolinearity and gene evolution within a homoeologous region of wheat and barley species Nathalie Chantret,Jerome Salse,François Sabot,Arnaud Bellec,Bastien Laubinet al. Journal of Molecular Evolution, 2008, 66 (2), pp.138-150. ⟨10.1007/s00239-008-9066-8⟩ Article dans une revue istex hal-01189382v1
Unique genes in plants: specificities and conserved features throughout evolution David Armisén,Alain Lecharny,Sebastien S. Aubourg BMC Evolutionary Biology, 2008, 8 (280), pp.15. ⟨10.1186/1471-2148-8-280⟩ Article dans une revue hal-02662345v1
CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform Séverine Gagnot,Jean-Philippe Tamby,Marie-Laure Magniette,Frederique Bitton,Ludivine Taconnatet al. Nucleic Acids Research, 2008, 36, pp.D986-D990. ⟨10.1093/nar/gkm757⟩ Article dans une revue hal-01203869v1
Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5 Moussa Benhamed,Marie-Laure Martin-Magniette,Ludivine Taconnat,Frederique Bitton,Caroline Servetet al. The Plant Journal, 2008, 56 (3), pp.493-504. ⟨10.1111/j.1365-313X.2008.03606.x⟩ Article dans une revue hal-02659090v1
Characterization of Arabidopsis thaliana mismatch specific endonucleases: application to mutation discovery by TILLING in pea Karine Triques,Bénédicte Sturbois,Stéphane Gallais,Marion Dalmais,Stéphanie Chauvinet al. The Plant Journal, 2007, 51 (6), pp.1116-1125. ⟨10.1111/j.1365-313X.2007.03201.x⟩ Article dans une revue hal-04077777v1
Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome Sebastien S. Aubourg,Marie-Laure Martin-Magniette,Veronique V. Brunaud,Ludivine Taconnat,Frederique Bittonet al. BMC Genomics, 2007, 8 (401), pp.1-9. ⟨10.1186/1471-2164-8-401⟩ Article dans une revue hal-02668276v1
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Olivier Jaillon,Jean-Marc Aury,Benjamin Noel,Alberto Policriti,Christian Clepetet al. Nature, 2007, 449 (7161), pp.463-7. ⟨10.1038/nature06148⟩ Article dans une revue inria-00180136v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. S. Aubourg,V. Brunaud,C. Bruyere,M. Cock,R. Cookeet al. Nucleic Acids Research, 2005, 33, pp.D641-D646 Article dans une revue hal-00313737v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts Sebastien Aubourg,Veronique Brunaud,Clémence Bruyère,J. Mark Cock,Richard Cookeet al. Nucleic Acids Research, 2005, 33, pp.D641-D646. ⟨10.1093/nar/gki115⟩ Article dans une revue hal-01189162v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts S. Aubourg,Annick Cottet,Denis Falconet,Régis Mache,Philippe Schwob Nucleic Acids Research, 2005, 33, pp.D641-D646 Article dans une revue hal-00018165v1
Molecular basis of evolutionary events that shaped the Hardness locus in diploid and polyploid wheat species (Triticum and Aegilops) Nathalie N. Chantret,Jerome J. Salse,François F. Sabot,Sadequr S. Rahman,Arnaud A. Bellecet al. The Plant cell, 2005, 17 (4), pp.1033-1045. ⟨10.1105/tpc.104.029181⟩ Article dans une revue hal-00964165v1
Molecular Basis of Evolutionary Events That Shaped the Hardness Locus in Diploid and Polyploid Wheat Species (Triticum and Aegilops) Nathalie Chantret,Jérôme Salse,François Sabot,Sadequr Rahman,Arnaud Bellecet al. The Plant cell, 2005, 17 (4), pp.1033-1045. ⟨10.1105/tpc.104.029181⟩ Article dans une revue hal-04198545v1
Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis Claire Lurin,Charles Andres,Sebastien Aubourg,M. Bellaoui,Frédérique Bittonet al. The Plant cell, 2004, 16 (7), pp.1-15 Article dans une revue hal-02679636v1
Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements Magali Lescot,S. Rombauts,J. Zhang,S. Aubourg,C. Mathéet al. TAG Theoretical and Applied Genetics, 2004, 109 (1), pp.10-22. ⟨10.1007/s00122-004-1621-0⟩ Article dans une revue istex hal-02978143v1
FLAGdb++: a database for the functional analysis of the Arabidopsis genome Franck Samson,Véronique Brunaud,S. Duchêne,Y. de Oliveira,Michel M. Cabocheet al. Nucleic Acids Research, 2004, 32 (1), pp.347-350. ⟨10.1093/nar/gkh134⟩ Article dans une revue hal-02682811v1
Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications Pierre Hilson,Sebastien Aubourg,Alexandra Avon,Frédérique Bitton,Michel M. Cabocheet al. Genome Research, 2004, 14 (10b), pp.2176-2189 Article dans une revue hal-02673981v1
Introns in, introns out in plant gene families: a genomic approach of the dynamics of gene structure. Alain Lecharny,Nathalie Boudet,Isabelle Gy,Sébastien Aubourg,Martin Kreis Journal of Structural and Functional Genomics, 2003, 3 (1-4), pp.111-6 Article dans une revue hal-04402783v1
CATMA: a complete Arabidopsis GST database M.L. Crowe,K. Serizet,Vincent Thareau,Sebastien Aubourg,Pierre Rouzéet al. Nucleic Acids Research, 2003, 31 (1), pp.156-158. ⟨10.1093/nar/gkg071⟩ Article dans une revue hal-02681486v1
Automatic design of gene-specific sequence tags for genome-wide functional studies Vincent Thareau,Patrice Dehais,C. Serizet,Pierre Hilson,Pierre Rouzéet al. Bioinformatics, 2003, 19 (17), pp.2191-2198. ⟨10.1093/bioinformatics/btg286⟩ Article dans une revue hal-02677651v1
Genomic analysis of the terpenoid synthase (AtTPS) gene family of Arabidopsis thaliana Sebastien Aubourg,A. Lecharny,J. Bohlmann Molecular Genetics and Genomics, 2002, 267, pp.730-745. ⟨10.1007/s00438-002-0709-y⟩ Article dans une revue istex hal-02683601v1
T-DNA integration into Arabidopsis genome depends on sequences of pre-insertion sites Véronique Brunaud,Sandrine Balzergue,Bertrand B. Dubreucq,Sebastien Aubourg,Franck Samsonet al. EMBO Reports, 2002, 3 (12), pp.1152-1157. ⟨10.1093/embo-reports/kvf237⟩ Article dans une revue hal-02682810v1
Evolution of intron/exon structure of DEAD helicase family genes in Arabidopsis, Caenorhabdtitis, and Drosophila Nathalie Boudet,Sebastien Aubourg,Claire Toffano-Nioche,M. Kreis Genome Research, 2001, 11, pp.2101-2114 Article dans une revue hal-02672398v1
Genome annotation Sebastien Aubourg,Pierre Rouzé Plant Physiology and Biochemistry, 2001, 39, pp.181-193 Article dans une revue hal-02669864v1
Progress in Arabidopsis genome sequencing and functional genomics R Wambutt,G Murphy,G Volckaert,T Pohl,A Düsterhöftet al. Journal of Biotechnology, 2000, 78 (3), pp.281-292. ⟨10.1016/s0168-1656(00)00195-4⟩ Article dans une revue istex hal-04402792v1
In Arabidopsis thaliana, 1% of the genome codes for a novel protein family unique to plants Sébastien Aubourg,Nathalie Boudet,Martin Kreis,Alain Lecharny Plant Molecular Biology, 2000, 42 (4), pp.603-613. ⟨10.1023/a:1006352315928⟩ Article dans une revue istex hal-04402786v1
Organization and structural evolution of four multigene families in Arabidopsis thaliana: AtLCAD AtLGT AtMYST and AtHD-GL2 R. Tavares,S. Aubourg,A. Lecharny,M. Kreis Plant Molecular Biology, 2000, 42, pp.703-717 Article dans une revue hal-00427108v1
Structure and expression of three src2 homologues and a novel subfamily of flavoprotein monooxygenase genes revealed by the analysis of a 25kb fragment from Arabidopsis thaliana chromosome IV Sébastien Aubourg,Alain Picaud,Martin Kreis,Alain Lecharny Gene, 1999, 230 (2), pp.197-205. ⟨10.1016/s0378-1119(99)00073-6⟩ Article dans une revue istex hal-04402806v1
The DEAD box RNA helicase family in Arabidopsis thaliana Sébastien Aubourg,M. Kreis,A. Lecharny Nucleic Acids Research, 1999, 27 (2), pp.628-636. ⟨10.1093/nar/27.2.628⟩ Article dans une revue hal-04402845v1
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana K. Mayer,C. Schüller,R. Wambutt,G. Murphy,G. Volckaertet al. Nature, 1999, 402 (6763), pp.769-777. ⟨10.1038/47134⟩ Article dans une revue hal-04402802v1
Analysis of a 14-kb fragment containing a putative cell wall gene and a candidate for the ARA1, arabinose kinase, gene from chromosome IV of Arabidopsis thaliana Isabelle Gy,Sébastien Aubourg,Sarah Sherson,Christopher Cobbett,Angélique Cheronet al. Gene, 1998, 209 (1-2), pp.201-210. ⟨10.1016/s0378-1119(98)00049-3⟩ Article dans une revue istex hal-04402904v1
Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana M. Bevan,I. Bancroft,E. Bent,K. Love,H. Goodmanet al. Nature, 1998, 391 (6666), pp.485-488. ⟨10.1038/35140⟩ Article dans une revue hal-04402918v1
Structure and expression of an asparaginyl-tRNA synthetase gene located on chromosome IV of Arabidopsis thaliana and adjacent to a novel gene of 15 exons Sébastien Aubourg,Angélique Chéron,Martin Kreis,Alain Lecharny BBA - Gene Structure and Expression, 1998, 1398 (3), pp.225-231. ⟨10.1016/s0167-4781(98)00068-2⟩ Article dans une revue istex hal-04402885v1
Structure, organization and putative function of the genes identified within a 23.9-kb fragment from Arabidopsis thaliana chromosome IV Sébastien Aubourg,Alain Takvorian,Angélique Chéron,Martin Kreis,Alain Lecharny Gene, 1997, 199 (1-2), pp.241-253. ⟨10.1016/s0378-1119(97)00374-0⟩ Article dans une revue istex hal-04402924v1
Estimation of the H+/H− ratio of the reaction catalysed by the nicotinamide nucleotide transhydrogenase in chromatophores from over-expressing strains of Rhodospirillum rubrum and in liposomes inlaid with the purified bovine enzyme Tania Bizouarn,Leonid Sazanov,Sébastien Aubourg,J. Baz Jackson Biochimica biophysica acta (BBA) - Bioenergetics, 1996, 1273 (1), pp.4-12. ⟨10.1016/0005-2728(95)00125-5⟩ Article dans une revue hal-04402928v1

Communication dans un congrès (8)

Activation of seed defenses through defense priming Jerome Verdier,Łukasz Paweł Tarkowski,Armelle Darrasse,David Lalanne,Muriel Marchiet al. International Conference in Plant Pathology (ICPP), Aug 2023, Lyon, France Communication dans un congrès hal-04665344v1
The SCOOP family of phytocytokines, at the boundaries of plant defense and development Marie-Charlotte Guillou,Thierry Balliau,Emilie Vergne,Hervé Canut,Josiane Chourréet al. Genetoberfest 2023, Oct 2023, Berlin, Germany. ⟨10.14293/GOF.23.38⟩ Communication dans un congrès hal-04521892v1
A serine-rich secreted peptide involved in Arabidopsis thaliana root elongation Marie-Charlotte Guillou,Emilie Vergne,Sophie Aligon,Philippe Grappin,David Rousseauet al. 8th International Meeting on Plant Peptides and Receptors., Sep 2020, Mont Pélerin, Switzerland Communication dans un congrès hal-03104148v1
Regulation of plant development and defense response by fireman, a new small endogenous peptide Kay Gully,Sandra Pelletier,Marie-Charlotte Guillou,Sophie Aligon,Emilie Vergneet al. 5th European Workshop on Peptide Signalling in Plants, 2017, Copenhage, Denmark Communication dans un congrès hal-02516578v1
The rose genome sequencing initiative. Fabrice Foucher,Laurence Hibrand-Saint Oyant,Latifa Hamama,Tatiana Thouroude,Annie Chastellieret al. VII International Symposium on Rose Research and Cultivation, Jul 2017, Angers, France Communication dans un congrès hal-03104072v1
A new signal peptide family in Arabidopsis thaliana. Sandra Pelletier,Marie-Charlotte Guillou,Kay Gully,M. Ferrand,Philippe Grappinet al. Congrès IRTA, Feb 2017, Barcelone, Spain Communication dans un congrès hal-03104253v1
From gene expression modeling to gene network to investigate Arabidopsis thaliana genes involved in stress response Rim Zaag,Jean-Philippe Tamby,Cécile Guichard,Zakia Tariq,Sébastien Aubourget al. The 26th international conference on Arabidopsis research (ICAR2015), Jul 2015, Paris, France Communication dans un congrès hal-04671451v1
The grapevine reference genome sequence Sébastien Aubourg,Nadia Bentahar,Marc Bras,Aurelie A. Canaguier,Nathalie Choisneet al. IX International Symposium on Grapevine Physiology and Biotechnology, Apr 2013, La Serena, Chile Communication dans un congrès hal-02811094v1

Poster de conférence (11)

Identification of phytocytokine-encoding genes induced in response to Erwinia amylovora and the chemical elicitor acibenzolar-S-methyl in apple tree A. Porquier,Marie-Charlotte Guillou,Matthieu Gaucher,Sandra Pelletier,Emilie Vergneet al. IS-MPMI 2025, Jul 2025, Cologne, Germany Poster de conférence hal-05390192v1
GBOT upgrade : a loci comparison tool dedicated to the exploration of duplications and synteny Franck Samson,Sébastien Aubourg JOBIM, Jul 2025, Bordeaux, France Poster de conférence hal-05164521v1
GBOT one flew over the ortholog’s nest Franck Samson,Sébastien Aubourg Jobim, Jun 2024, Toulouse, France Poster de conférence hal-04831777v1
How to explain QTL imbalance between ohnologous chromosomes? Tanguy Lallemand,Sébastien Aubourg,Gilles Hunault,Jean-Marc Celton,Claudine Landès JOBIM (Journées Ouvertes en Biologie, Informatique et Mathématiques), Jul 2021, Paris, France Poster de conférence hal-03635839v1
An Erwinia Amylovora inducible promoter for intragenic improvement of Apple Fire blight resistance Emilie Vergne,Matthieu Gaucher,Laura Righetti,Sebastien Aubourg,Thomas Duge de Bernonvilleet al. 10th ROSACEAE GENOMICS CONFERENCE (virtual 2020), Dec 2020, Barcelone, Spain. , pp.Abstract P0059, 2020, Proceedings of the conference (Web) Poster de conférence hal-03099576v1
Evolution of ohnologous chromosomes following Whole Genome Duplication in apple Tanguy Lallemand,Sebastien Aubourg,Gilles Hunault,Jean-Marc Celton,Claudine Landès Journées Ouvertes de Biologie, Informatique et Mathématique, Sep 2020, Montpellier, France Poster de conférence hal-02928930v1
Visualizing metadata change in networks and / or clusters Tanguy Lallemand,Sylvain Gaillard,Sandra Pelletier,Claudine Landès,Sébastien Aubourget al. Journées Ouvertes Biologie, Informatique et Mathématiques (JOBIM), Jul 2019, Nantes, France Poster de conférence hal-02395309v1
The complete apple genome : Evolutionary events revealed. Nicolas Daccord,Jean-Marc Celton,G. Linsmith,C. Becker,Nathalie Choisneet al. XXV Plant and Animal Genome Conference., Jan 2017, San Diego, United States. 2017 Poster de conférence hal-03106053v1
The complete apple genome Nicolas Daccord,Jean-Marc Celton,E. Schiilen,Henri van de Geest,C. Beckeret al. Journées Ouvertes Biologie Informatique et Mathématiques (JOBIM’2016)., Jun 2016, Lyon, France. 2016 Poster de conférence hal-03106007v1
CORGI : Co-regulated gene investigator. Sandra Pelletier,Sylvain Gaillard,Sebastien Aubourg,Martin-Magniette Marie-Laure,Veronique Brunaudet al. Journées Ouvertes Biologie Informatique et Mathématiques (JOBIM’2016), Jun 2016, Lyon, France Poster de conférence hal-03104271v1
Populus Genome Portal Isabelle Bourgait,Farid Ghazali,Vivianne Judith Koyao-Darinest,Véronique Jorge,Franck F. Samsonet al. 2. Poplar Symposium, Mar 2009, Göttingen, Germany. , 1 p., 2009 Poster de conférence hal-02820105v1

Chapitre d'ouvrage (2)

Bioinformatics Methods for Prediction of Gene Families Encoding Extracellular Peptides Loup Tran van Canh,Sébastien Aubourg Plant Peptide Hormones and Growth Factors, 2731, Springer US, pp.3-21, 2024, Methods in Molecular Biology, Electronic ISSN : 1940-6029. ⟨10.1007/978-1-0716-3511-7_1⟩ Chapitre d'ouvrage hal-04394046v1
Biochemical, Molecular Genetic and Evolutionary Aspects of Defense-Related Terpenoid Metabolism in Conifers Jörg Bohlmann,Jonathan Gershenzon,Sébastien Aubourg EVOLUTION OF METABOLIC PATHWAYS, 34, 109-150 (Chap. 5), 2000, Recent Advances in Phytochemistry, 0-08-043860-1; ISSN 0079-9920 : Recent Advances in Phytochemistry. ⟨10.1016/S0079-9920(00)80006-4⟩ Chapitre d'ouvrage hal-04402187v1