Sebastien Santini

Publications

Article dans une revue (35)

Pacmanvirus isolated from the Lost City hydrothermal field extends the concept of transpoviron beyond the family Mimiviridae Sébastien Santini,Audrey Lartigue,Jean-Marie Alempic,Yohann Couté,Lucid Belmudeset al. The International Society of Microbiologial Ecology Journal, 2025, 19 (1), ⟨10.1093/ismejo/wraf002/7950992⟩ Article dans une revue hal-04886539v1
Uncovering enzymatic tools promoting lignocellulose breakdown in the anaerobic bacterium Ruminiclostridium cellulolyticum Nicolas Vita,Marion Holmière,Felipe Mejia-Otalvaro,Fabian Debard,Lison Degeilhet al. Communications Biology, 2025, 9, pp.24. ⟨10.1038/s42003-025-09287-y⟩ Article dans une revue hal-05441823v1
Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes Jean-Marie Alempic,Hugo Bisio,Alejandro Villalta,Sébastien Santini,Audrey Lartigueet al. microLife, 2024, 5, ⟨10.1093/femsml/uqae006⟩ Article dans une revue hal-04571293v1
The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes Sébastien Santini,Quentin Schenkelaars,Cyril Jourda,Marc Duchesne,Hassiba Belahbibet al. BMC Biology, 2023, 21 (1), pp.139. ⟨10.1186/s12915-023-01619-w⟩ Article dans une revue hal-03757223v1
An Update on Eukaryotic Viruses Revived from Ancient Permafrost Jean-Marie Alempic,Audrey Lartigue,Artemiy E Goncharov,Guido Grosse,Jens Strausset al. Viruses, 2023, 15 (2), pp.564. ⟨10.3390/xxxxx⟩ Article dans une revue hal-04207147v1
Metagenomic survey of the microbiome of ancient Siberian permafrost and modern Kamchatkan cryosols Sofia Rigou,Eugène Christo-Foroux,Sébastien Santini,Artemiy Goncharov,Jens Strausset al. microLife, 2022, pp.uqac003. ⟨10.1093/femsml/uqac003⟩ Article dans une revue hal-03640343v1
Past and present giant viruses diversity explored through permafrost metagenomics Sofia Rigou,Sébastien Santini,Chantal Abergel,Jean-Michel Claverie,Matthieu Legendre Nature Communications, 2022, 13 (1), pp.5853. ⟨10.1038/s41467-022-33633-x⟩ Article dans une revue hal-03807788v1
Validation of predicted anonymous proteins simply using Fisher’s exact test Jean-Michel Claverie,Sébastien Santini Bioinformatics Advances, 2021, ⟨10.1093/bioadv/vbab034⟩ Article dans une revue hal-03463386v1
Characterization of mollivirus Kamchatka, the First modern representative of the proposed molliviridae family of giant viruses Eugene Christo-Foroux,Jean-Marie Alempic,Audrey Lartigue,Sebastien Santini,Karine Labadieet al. Journal of Virology, 2020, 94 (8), pp.e01997-19. ⟨10.1128/jvi.01997-19⟩ Article dans une revue hal-04290133v1
Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world Sandra Jeudy,Lionel Bertaux,Jean-Marie Alempic,Audrey Lartigue,Matthieu Legendreet al. The International Society of Microbiologial Ecology Journal, 2020, ⟨10.1038/s41396-019-0565-y⟩ Article dans une revue hal-02409597v1
Characterization of Mollivirus kamchatka , the first modern representative of the proposed Molliviridae family of giant viruses. Eugene Christo-Foroux,Jean-Marie Alempic,Audrey Lartigue,Sébastien Santini,Karine Labadieet al. Journal of Virology, 2020, ⟨10.1101/844274⟩ Article dans une revue hal-02464533v1
Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes Hua-Hao Zhang,Qiu-Zhong Zhou,Ping-Lan Wang,Xiao-Min Xiong,Andréa Luchettiet al. Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩ Article dans une revue hal-01830342v1
New genomic data and analyses challenge the traditional vision of animal epithelium evolution Hassiba Belahbib,Emmanuelle Renard,Sébastien Santini,Cyril Jourda,Jean-Michel Claverieet al. BMC Genomics, 2018, 19 (1), pp.393. ⟨10.1186/s12864-018-4715-9⟩ Article dans une revue hal-01951941v1
Noumeavirus replication relies on a transient remote control of the host nucleus Elisabeth Fabre,Sandra Jeudy,Sébastien Santini,Matthieu Legendre,Mathieu Trauchessecet al. Nature Communications, 2017, 8, pp.15087. ⟨10.1038/ncomms15087⟩ Article dans une revue hal-01534406v1
Benthic protists: the under-charted majority Dominik Forster,Micah Dunthorn,Fréderic Mahé,John R. Dolan,Stéphane Audicet al. FEMS Microbiology Ecology, 2016, 92 (8), pp.fiw120. ⟨10.1093/femsec/fiw120⟩ Article dans une revue hal-01383722v1
The 474-Kilobase-Pair Complete Genome Sequence of CeV-01B, a Virus Infecting Haptolina ( Chrysochromulina ) ericina (Prymnesiophyceae) Lucie Gallot-Lavallée,António Pagarete,Matthieu Legendre,Sebastien Santini,Ruth-Anne Sandaaet al. Genome Announcements, 2015, 3 (6), ⟨10.1128/genomea.01413-15⟩ Article dans une revue hal-05370823v1
In Vivo Evolution of Bacterial Resistance in Two Cases of Enterobacter aerogenes Infections during Treatment with Imipenem Nadège Philippe,Laure Maigre,Sébastien Santini,Elizabeth Pinet,Jean-Michel Claverieet al. PLoS ONE, 2015, 10 (e0138828) Article dans une revue hal-01237665v1
Environmental characteristics of Agulhas rings affect interocean plankton transport Emilie Villar,Gregory Farrant,Michael J. Follows,Laurence Garczarek,Sabrina Speichet al. Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩ Article dans une revue hal-01893637v1
Mitochondrial Genome Sequence of the Glass Sponge Oopsacas minuta Cyril Jourda,Sébastien Santini,Caroline Rocher,André Le Bivic,Jean-Michel Claverie Genome Announcements, 2015, 3 (4), ⟨10.1128/genomea.00823-15⟩ Article dans une revue hal-05370846v1
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing Ramon Massana,Angélique Gobet,Stéphane Audic,David Bass,Lucie Bittneret al. Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩ Article dans une revue hal-01191731v1
Draft Genome Sequence of an Alphaproteobacterium Associated with the Mediterranean Sponge Oscarella lobularis Cyril Jourda,Sébastien Santini,Caroline Rocher,André Le Bivic,Jean-Michel Claverie Genome Announcements, 2015, 3 (5), ⟨10.1128/genomeA.00977-15.⟩ Article dans une revue hal-05370830v1
Patterns of Rare and Abundant Marine Microbial Eukaryotes Ramiro Logares,Stéphane Audic,David Bass,Lucie Bittner,Christophe Boutteet al. Current Biology, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩ Article dans une revue hal-01149637v1
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay. Lucie Bittner,Angélique Gobet,Stéphane Audic,Sarah Romac,Elianne S Eggeet al. Molecular Ecology, 2013, 22 (1), pp.87-101. ⟨10.1111/mec.12108⟩ Article dans une revue istex hal-00817857v1
Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes Sebastien Santini,Sandra Jeudy,Julia Bartoli,Olivier Poirot,Magali Lescotet al. Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (26), pp.10800-10805. ⟨10.1073/pnas.1303251110⟩ Article dans une revue hal-05370967v1
Vampires in the oceans: predatory cercozoan amoebae in marine habitats Cédric Berney,Sarah Romac,Frédéric Mahé,Sébastien Santini,Raffaele Sianoet al. The International Society of Microbiologial Ecology Journal, 2013, 7 (12), pp.2387-2399. ⟨10.1038/ismej.2013.116⟩ Article dans une revue hal-01258230v1
Reticulamoeba Is a Long-Branched Granofilosean (Cercozoa) That Is Missing from Sequence Databases David Bass,Akinori Yabuki,Sébastien Santini,Sarah Romac,Cédric Berney PLoS ONE, 2012, 7 (12), pp.e49090. ⟨10.1371/journal.pone.0049090⟩ Article dans une revue hal-01258242v1
Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing Ramiro Logares,Stéphane Audic,Sébastien Santini,Massimo C. Pernice,Colomban de Vargaset al. The International Society of Microbiologial Ecology Journal, 2012, 6 (10), pp.1823-1833. ⟨10.1038/ismej.2012.36⟩ Article dans une revue hal-01258237v1
Breaking the 1000-gene barrier for Mimivirus using ultra-deep genome and transcriptome sequencing Matthieu Legendre,Sébastien Santini,Alain Rico,Chantal Abergel,Jean-Michel Claverie Virology Journal, 2011, 8 (1), pp.99. ⟨10.1186/1743-422x-8-99⟩ Article dans une revue hal-05370980v1
The Conserved Candida albicans CA3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold Sébastien Santini,Jean-Michel Claverie,Nicolas Mouz,Tristan Rousselle,Caroline Mazaet al. PLoS ONE, 2011, 6 (4), pp.e18528. ⟨10.1371/journal.pone.0018528⟩ Article dans une revue hal-05370973v1
Structural features conferring dual Geranyl/Farnesyl diphosphate synthase activity to an aphid prenyltransferase Sophie Vandermoten,Sébastien Santini,Éric Haubruge,Fabien Heuze,Frédéric Franciset al. Insect Biochemistry and Molecular Biology, 2009, 39 (10), pp.707 - 716. ⟨10.1016/j.ibmb.2009.08.007⟩ Article dans une revue istex hal-05370989v1
Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase Sébastien Santini,Vincent Monchois,Nicolas Mouz,Cécile Sigoillot,Tristan Rousselleet al. BMC Structural Biology, 2008, 8 (1), pp.33. ⟨10.1186/1472-6807-8-33⟩ Article dans une revue hal-05371026v1
Ir-LBP, an Ixodes ricinus Tick Salivary LTB4-Binding Lipocalin, Interferes with Host Neutrophil Function Jérôme Beaufays,Benoît Adam,Catherine Menten-Dedoyart,Laurence Fievez,Amélie Grosjeanet al. PLoS ONE, 2008, 3 (12), pp.e3987. ⟨10.1371/journal.pone.0003987⟩ Article dans une revue hal-05371013v1
Ixodes ricinus Tick Lipocalins: Identification, Cloning, Phylogenetic Analysis and Biochemical Characterization Jérôme Beaufays,Benoît Adam,Yves Decrem,Pierre-Paul Prévôt,Sébastien Santiniet al. PLoS ONE, 2008, 3 (12), pp.e3941. ⟨10.1371/journal.pone.0003941⟩ Article dans une revue hal-05371017v1
In Silico Assembly of Alzheimer's Aβ&lt;sub&gt;16&lt;/sub&gt;&lt;sub&gt;-&lt;/sub&gt;&lt;sub&gt;22&lt;/sub&gt; Peptide into β-Sheets Sébastien Santini,Normand Mousseau,Philippe Derreumaux Journal of the American Chemical Society, 2004, 126 (37), pp.11509 - 11516. ⟨10.1021/ja047286i⟩ Article dans une revue istex hal-05371053v1
Impact of the Tail and Mutations G131V and M129V on Prion Protein Flexibility Sébastien Santini,Jean‐baptiste Claude,Stéphane Audic,Philippe Derreumaux Proteins - Structure, Function and Bioinformatics, 2003, 51 (2), pp.258-265. ⟨10.1002/prot.10348⟩ Article dans une revue istex hal-05371075v1

Pré-publication, Document de travail (2)

Elucidating the interaction network of one of the largest icosahedral capsids in the virosphere Hela Safi,Alain Schmitt,Alwena Tollec,Lucid Belmudes,Agathe Colmantet al. 2025 Pré-publication, Document de travail hal-05406623v1
Past and present giant viruses diversity explored through permafrost metagenomics Sofia Rigou,Sébastien Santini,Chantal Abergel,Jean-Michel Claverie,Matthieu Legendre 2022 Pré-publication, Document de travail hal-03810478v1