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Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU identity threshold
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mFD: an R package to compute and illustrate the multiple facets of functional diversity
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Human impacts on global freshwater fish biodiversity
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Automatic underwater fish species classification with limited data using few-shot learning
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Microbial Shift in the Enteric Bacteriome of Coral Reef Fish Following Climate-Driven Regime Shifts
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Christina C Hicks
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FISHMORPH: A global database on morphological traits of freshwater fishes
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Predation Cues Lead to Reduced Foraging of Invasive Siganus rivulatus in the Mediterranean
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Trait similarity in reef fish faunas across the world’s oceans
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Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (12), pp.e2012318118. ⟨10.1073/pnas.2012318118⟩
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Underwater robots provide similar fish biodiversity assessments as divers on coral reefs
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Microbial Shift in the Enteric Bacteriome of Coral Reef Fish Following Climate-Driven Regime Shifts
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Christina C Hicks
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James P W Robinson
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Use of environmental DNA in assessment of fish functional and phylogenetic diversity
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Coral Reef Fish: Not Just a Matter of Beauty!
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Meeting fisheries, ecosystem function, and biodiversity goals in a human-dominated world
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Global patterns and predictors of trophic position, body size and jaw size in fishes
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Global changes threaten functional and taxonomic diversity of insular species worldwide
Camille Leclerc
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Clara Marino
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Exceptional but vulnerable microbial diversity in coral reef animal surface microbiomes
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Morphological sorting of introduced freshwater fish species within and between donor realms
Guohuan Su
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Nutrient limitation, bioenergetics and stoichiometry: A new model to predict elemental fluxes mediated by fishes
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Jacob E Allgeier
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Deron E Burkepile
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A global database for metacommunity ecology, integrating species, traits, environment and space
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A new method to control error rates in automated species identification with deep learning algorithms
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Species diversity and composition drive the aesthetic value of coral reef fish assemblages
Anne-Sophie Tribot
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Thomas Claverie
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François Guillhaumon
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Interspecific differences in environmental response blur trait dynamics in classic statistical analyses
Matthew Mclean
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Nicholas a J Graham
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Morphological diversity of freshwater fishes differs between realms, but morphologically extreme species are widespread
Guohuan Su
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Trait structure and redundancy determine sensitivity to disturbance in marine fish communities
Matthew Mclean
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Fish communities diverge in species but converge in traits over three decades of warming
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Interspecific differences in the effect of fish on marine microbial plankton
Sébastien Villéger
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Jérémy Argenty
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Corinne Bouvier
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High intraspecific variability in morphology and diet in tropical stream fish communities
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An attribute-diversity approach to functional diversity, functional beta diversity, and related (dis)similarity measures
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I.-Fang Sun
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Accounting for intraspecific diversity when examining relationships between non-native species and functional diversity
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Disentangling the pathways of land use impacts on the functional structure of fish assemblages in Amazon streams
Rafael P. Leitao
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Cecilia G. Leal
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A Deep learning method for accurate and fast identification of coral reef fishes in underwater images
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Marc Chaumont
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Emily Darling
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Gérard Subsol
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Functional biodiversity loss along natural CO2 gradients
Nuria Teixido
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Maria Cristina Gambi
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Valeriano Parravacini
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Kristy Kroeker
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Fiorenza Micheli
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Functional rarity of coral reef fishes at the global scale: Hotspots and challenges for conservation
Matthias Grenie
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Pierre Denelle
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Caroline M. Tucker
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Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific
Eva Maire
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Nicholas A. J. Graham
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Andrew S. Hoey
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Joshua Cinner
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Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet
Marlene Chiarello
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J.-C. Auguet
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Yvan Bettarel
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Corinne Bouvier
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Functional diversity measures revealed impacts of non-native species and habitat degradation on species-poor freshwater fish assemblages
Nicole Colin
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Martin Wilkes
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Adolfo De Sostoa
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Alberto Maceda-Veiga
Journal articles
hal-01826661v1
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Complementarity of the multidimensional functional and the taxonomic approaches to study phytoplankton communities in three Mediterranean coastal lagoons of different trophic status
A. Leruste
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N. Malet
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R. de Wit
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B. Bec
Journal articles
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Non-native species led to marked shifts in functional diversity of the world freshwater fish faunas
Aurele Toussaint
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Nicolas Charpin
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Olivier Beauchard
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Gael Grenouillet
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Thierry Oberdorff
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Confronting species aesthetics with ecological functions in coral reef fish
Anne-Sophie Tribot
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Quentin Carabeux
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Julie Deter
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Thomas Claverie
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Sebastien Villeger
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A Climate-Driven Functional Inversion of Connected Marine Ecosystems
Matthew Mclean
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David Mouillot
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Martin Lindegren
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Georg Engelhard
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Sebastien Villeger
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Functional ecology of fish: current approaches and future challenges
Sébastien Villéger
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Sébastien Brosse
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Maud Mouchet
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David Mouillot
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Michael J. Vanni
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On the risks of using dendrograms to measure functional diversity and multidimensional spaces to measure phylogenetic diversity: a comment on Sobral et al . (2016)
Sébastien Villéger
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Eva Maire
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Fabien Leprieur
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hal-01928114v1
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Captive bottlenose dolphins and killer whales harbor a species-specific skin microbiota that varies among individuals
Marlène Chiarello
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Sébastien Villéger
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Corinne Bouvier
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J.-C. Auguet
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Thierry Bouvier
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Biogeographical region and environmental conditions drive functional traits of estuarine fish assemblages worldwide
Sofia Henriques
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François Guilhaumon
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Sébastien Villéger
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Sandra Amoroso
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Susana França
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Biogeographical, environmental and anthropogenic determinants of global patterns in bird taxonomic and trait turnover
Cagan H. Sekercioglu
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Jean-Yves Barnagaud
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W. Daniel Kissling
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Constantinos Tsirogiannis
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Vissarion Fisikopoulos
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Mare Incognitum: A Glimpse into Future Plankton Diversity and Ecology Research
Guillem Chust
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Meike Vogt
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Fabio Benedetti
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Teofil Nakov
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Sébastien Villéger
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Worldwide freshwater fish homogenization is driven by a few widespread non-native species
Aurèle Toussaint
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Olivier Beauchard
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Thierry Oberdorff
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Sébastien Brosse
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Sébastien Villéger
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Mapping biodiversity in three-dimensions challenges marine conservation strategies: The example of coralligenous assemblages in North-Western Mediterranean Sea
Aggeliki Doxa
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Florian Holon
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Julie Deter
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Sébastien Villéger
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Pierre Boissery
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hal-01444069v1
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Increased taxonomic and functional similarity does not increase the trophic similarity of communities
Thomas Pool
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Julien Cucherousset
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Stéphanie Boulêtreau
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Sébastien Villéger
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Angela Strecker
Journal articles
hal-01923719v1
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Rare species contribute disproportionately to the functional structure of species assemblages
Rafael P. Leitão
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Jansen Zuanon
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Sébastien Villéger
,
Stephen E. Williams
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Christopher Baraloto
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Unexpected high vulnerability of functions in wilderness areas: evidence from coral reef fishes
Stephanie d'Agata
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Laurent Vigliola
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Nicholas Graham
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Laurent Wantiez
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Valeriano Parravicini
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hal-01926552v1
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Taxonomic and functional diversity increase the aesthetic value of coralligenous reefs
Anne-Sophie Tribot
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Nicolas Mouquet
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Sébastien Villéger
,
Michel Raymond
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Fabrice Hoff
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hal-03104012v1
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Global functional diversity of freshwater fish is concentrated in the Neotropics while functional vulnerability is widespread
A. Toussaint
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N. Charpin
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S. Brosse
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S. Villéger
Journal articles
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Quantifying the multiple facets of isotopic diversity: New metrics for stable isotope ecology
Julien Cucherousset
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Sébastien Villéger
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From current distinctiveness to future homogenization of the world's freshwater fish faunas
Sébastien Villéger
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Simon Blanchet
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Olivier Beauchard
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Thierry Oberdorff
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Sébastien Brosse
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Coral-associated viruses and bacteria in the Ha Long Bay, Vietnam
The Thu Pham
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van Thuoc Chu
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Thu Viet Ha Bui
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Thanh Thuy Nguyen
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Quang Huy Tran
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How many dimensions are needed to accurately assess functional diversity? A pragmatic approach for assessing the quality of functional spaces
Eva Maire
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Gaël Grenouillet
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Sébastien Brosse
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Sébastien Villéger
Journal articles
hal-01919339v1
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High diversity of skin-associated bacterial communities of marine fishes is promoted by their high variability among body parts, individuals and species
Marlène Chiarello
,
Sébastien Villéger
,
Corinne Bouvier
,
Yvan Bettarel
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Thierry Bouvier
Journal articles
hal-01841505v1
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Combinations of biological attributes predict temporal dynamics of fish species in response to environmental changes
C. Sirot
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S. Villéger
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D. Mouillot
,
Audrey M. Darnaude
,
J. Ramos-Miranda
Journal articles
hal-01840060v1
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Non-native species modify the isotopic structure of freshwater fish communities across the globe
A. Sagouis
,
J. Cucherousset
,
S. Villeger
,
F. Santoul
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S. Boulêtreau
Journal articles
hal-01921807v1
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Temporal changes in the taxonomic and functional diversity of fish communities in shallow Chinese lakes: the effects of river-lake connections and aquaculture
Lin Cheng
,
Simon Blanchet
,
Géraldine Loot
,
Sebastien Villéger
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Tanglin Zhang
Aquatic Conservation: Marine and Freshwater Ecosystems, 2014, 24 (1), pp.23-34. ⟨10.1002/aqc.2418⟩
Journal articles
hal-02965442v1
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Toward a loss of functional diversity in stream fish assemblages under climate change
Laetitia Buisson
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Gaël Grenouillet
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Sébastien Villéger
,
Julie Canal
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Pascal Laffaille
Journal articles
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Colossal Aggregations of Giant Alien Freshwater Fish as a Potential Biogeochemical Hotspot
Stéphanie Boulêtreau
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Julien Cucherousset
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Sébastien Villéger
,
Rémi Masson
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Frédéric Santoul
Journal articles
hal-00912411v1
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Defining and measuring ecological specialization
Vincent Devictor
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Joanne Clavel
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Romain Julliard
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Sébastien Lavergne
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David Mouillot
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