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Sébastien Villéger



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Automated identification of invasive rabbitfishes in underwater images from the Mediterranean Sea

Valentine Fleuré , Camille Magneville , David Mouillot , Sébastien Villéger
Aquatic Conservation: Marine and Freshwater Ecosystems, 2024, 34 (1), pp.e4073. ⟨10.1002/aqc.4073⟩
Journal articles hal-04491791v1
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Functional changes across marine habitats due to ocean acidification

Núria Teixidó , Jérémy Carlot , Samir Alliouane , Enric Ballesteros , Cinzia de Vittor
Global Change Biology, 2024, 30 (1), pp.170105. ⟨10.1111/gcb.17105⟩
Journal articles hal-04417178v1
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Detecting benefits of protection level on diversity facets in a sea of temporal scarcity

Camille Magneville , Solène Dedieu , Nicolas Loiseau , Thomas Claverie , Sébastien Villéger
Aquatic Conservation: Marine and Freshwater Ecosystems, 2024, ⟨10.1002/aqc.4062⟩
Journal articles hal-04431971v1

Stocking practices shape the taxonomic and functional diversity of fish communities in gravel pit lakes

Marie Gimenez , Sébastien Villéger , Gaël Grenouillet , Julien Cucherousset
Fisheries Management and Ecology, 2023, ⟨10.1111/fme.12621⟩
Journal articles hal-04104169v1
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The role of fish feces for nutrient cycling on coral reefs

Nina Schiettekatte , Jordan Casey , Simon Brandl , Alexandre Mercière , Sam Degregori
Journal articles hal-04163907v1
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Behavior of reef fishes during a submarine magnitude 5 earthquake

Sébastien Villéger , Camille Magneville , Fany Roncin , Lise Retailleau , Thomas Claverie
Ecology, 2023, 104 (10), pp.e4148. ⟨10.1002/ecy.4148⟩
Journal articles hal-04248123v1
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Inferring functional diversity from environmental DNA metabarcoding

Céline Condachou , Tristan Milhau , Jérôme Murienne , Sébastien Brosse , Sébastien Villéger
Environmental DNA, 2023, 5 (5), pp.934-944. ⟨10.1002/edn3.391⟩
Journal articles hal-04269097v1
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An invasive herbivorous fish (Siganus rivulatus) influences both benthic and planktonic microbes through defecation and nutrient excretion

Arthur Escalas , Amandine Avouac , Jonathan Belmaker , Thierry Bouvier , Valentin Clédassou
Science of the Total Environment, 2022, 838 (3), pp.156207. ⟨10.1016/j.scitotenv.2022.156207⟩
Journal articles hal-03798650v1
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Long‐duration remote underwater videos reveal that grazing by fishes is highly variable through time and dominated by non‐indigenous species

Camille Magneville , Marie‐lou Leréec Le Bricquir , Thanos Dailianis , Grigorios Skouradakis , Thomas Claverie
Remote Sensing in Ecology and Conservation, 2022, ⟨10.1002/rse2.311⟩
Journal articles hal-03858677v1
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Linking key human-environment theories to inform the sustainability of coral reefs

Joshua Cinner , Jessica Zamborain-Mason , Eva Maire , Andrew Hoey , Nicholas A.J. Graham
Current Biology - CB, 2022, 32 (12), pp.2610-2620. ⟨10.1016/j.cub.2022.04.055⟩
Journal articles hal-03798539v1
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Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU identity threshold

Marlene Chiarello , Mark Mccauley , Sébastien Villéger , Colin R. Jackson
PLoS ONE, 2022, 17 (2), pp.e0264443. ⟨10.1371/journal.pone.0264443⟩
Journal articles hal-03669633v1
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Similar trait structure and vulnerability in pelagic fish faunas on two remote island systems

Madeline Steinberg , Jean-Baptiste Juhel , Virginie Marques , Clara Péron , Régis Hocdé
Marine Biology, 2022, 169 (1), ⟨10.1007/s00227-021-03998-6⟩
Journal articles hal-03566643v1
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Mesophotic coral ecosystems of French Polynesia are hotspots of alpha and beta generic diversity for scleractinian assemblages

Gonzalo Pérez‐rosales , Michel Pichon , Héloïse Rouzé , Sébastien Villéger , Gergely Torda
Diversity and Distributions, 2022, 28, pp.1391 - 1403. ⟨10.1111/ddi.13549⟩
Journal articles hal-03798538v1
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Biological trade-offs underpin coral reef ecosystem functioning

Nina Schiettekatte , Simon Brandl , Jordan Casey , Nicholas Graham , Diego Barneche
Nature Ecology & Evolution, 2022, 6, pp.701-708. ⟨10.1038/s41559-022-01710-5⟩
Journal articles hal-03637887v1
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mFD: an R package to compute and illustrate the multiple facets of functional diversity

Camille Magneville , Nicolas Loiseau , Camille Albouy , Nicolas Casajus , Thomas Claverie
Ecography, 2022, 2022 (1), ⟨10.1111/ecog.05904⟩
Journal articles hal-03566638v1
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Contemporary environment and historical legacy explain functional diversity of freshwater fishes in the world rivers

Guohuan Su , Pablo A. Tedesco , Aurele Toussaint , Sébastien Villéger , Sebastien Brosse
Global Ecology and Biogeography, 2022, ⟨10.1111/geb.13455⟩
Journal articles hal-03622229v1
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Combining stereo‐video monitoring and physiological trials to estimate reef fish metabolic demands in the wild

Nina M D Schiettekatte , Francesca Conte , Beverly French , Simon J Brandl , Christopher J Fulton
Ecology and Evolution, 2022, 12, ⟨10.1002/ece3.9084⟩
Journal articles hal-03798478v1
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Shift and homogenization of gut microbiome during invasion in marine fishes

Arthur Escalas , Jean-Christophe Auguet , Amandine Avouac , Jonathan Belmaker , Thanos Dailianis
Animal Microbiome, 2022, 4 (1), pp.37. ⟨10.1186/s42523-022-00181-0⟩
Journal articles hal-03691656v1
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Mesophotic reefs are not refugia for neither taxonomic nor functional diversity of reef fishes

Nicolas Loiseau , Sébastien Villéger , Charles Le Bozec , Marie Gimenez , Seiji Léo Kawahara
Journal articles hal-03860627v1
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Predation Cues Lead to Reduced Foraging of Invasive Siganus rivulatus in the Mediterranean

Daphna Shapiro Goldberg , Gil Rilov , Sébastien Villéger , Jonathan Belmaker
Frontiers in Marine Science, 2021, 8, pp.678848. ⟨10.3389/fmars.2021.678848⟩
Journal articles hal-03413533v1
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FISHMORPH: A global database on morphological traits of freshwater fishes

Sébastien Brosse , Nicolas Charpin , Guohuan Su , Aurèle Toussaint , Guido Herrera-R
Global Ecology and Biogeography, 2021, 30 (12), pp.2330-2336. ⟨10.1111/geb.13395⟩
Journal articles hal-03754045v1
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Human impacts on global freshwater fish biodiversity

Guohuan Su , Maxime Logez , Jun Xu , Shengli Tao , Sébastien Villéger
Science, 2021, 371 (6531), pp.835-838. ⟨10.1126/science.abd3369⟩
Journal articles hal-03321441v1
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Automatic underwater fish species classification with limited data using few-shot learning

Sebastien Villon , Corina Iovan , Morgan Mangeas , Thomas Claverie , David Mouillot
Ecological Informatics, 2021, 63, pp.101320. ⟨10.1016/j.ecoinf.2021.101320⟩
Journal articles hal-03415715v1
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Microbial Shift in the Enteric Bacteriome of Coral Reef Fish Following Climate-Driven Regime Shifts

Marie-Charlotte Cheutin , Sébastien Villéger , Christina C Hicks , James P W Robinson , Nicholas a J Graham
Microorganisms, 2021, 9, ⟨10.3390/microorganisms9081711⟩
Journal articles hal-03415928v1
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Phylogenetic conservatism drives nutrient dynamics of coral reef fishes

Jacob E. Allgeier , Brian C. Weeks , Katrina S. Munsterman , Nina Wale , Seth J. Wenger
Nature Communications, 2021, 12 (1), pp.5432. ⟨10.1038/s41467-021-25528-0⟩
Journal articles hal-03451166v1
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Underwater robots provide similar fish biodiversity assessments as divers on coral reefs

Mathilde Maslin , Silvain Louis , Karen Godary-Dejean , Lionel Lapierre , Sébastien Villéger
Remote Sensing in Ecology and Conservation, 2021, 7, pp.567-578. ⟨10.1002/rse2.209⟩
Journal articles hal-03261663v1
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Microbial Shift in the Enteric Bacteriome of Coral Reef Fish Following Climate-Driven Regime Shifts

Marie-Charlotte Cheutin , Sébastien Villéger , Christina C Hicks , James P W Robinson , Nicholas a J Graham
Journal articles hal-03357775v1
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Use of environmental DNA in assessment of fish functional and phylogenetic diversity

Virginie Marques , Paul Castagne , Andrea Polanco Fernandez , Giomar Helena Borrero-Perez , Régis Hocdé
Conservation Biology, 2021, ⟨10.1111/cobi.13802⟩
Journal articles hal-03451172v1
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Ecological Specialization Within a Carnivorous Fish Family Is Supported by a Herbivorous Microbiome Shaped by a Combination of Gut Traits and Specific Diet

Arthur Escalas , Jean-Christophe Auguet , Amandine Avouac , Raphael Seguin , Antoine Gradel
Frontiers in Marine Science, 2021, 8, pp.622883. ⟨10.3389/fmars.2021.622883⟩
Journal articles hal-03413506v1
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Trait similarity in reef fish faunas across the world’s oceans

Matthew Mclean , Rick Stuart-Smith , Sébastien Villéger , Arnaud Auber , Graham Edgar
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (12), pp.e2012318118. ⟨10.1073/pnas.2012318118⟩
Journal articles hal-03435832v1

Coral reef fishes reveal strong divergence in the prevalence of traits along the global diversity gradient

V. Parravicini , M. G. Bender , Sébastien Villéger , Fabien Leprieur , L. Pellissier
Proceedings of the Royal Society B: Biological Sciences, 2021, 288 (1961), pp.20211712. ⟨10.1098/rspb.2021.1712⟩
Journal articles hal-03475052v1
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The dimensionality and structure of species trait spaces

David Mouillot , Nicolas Loiseau , Matthias Grenié , Adam Algar , Michele Allegra
Ecology Letters, 2021, 24 (9), pp.1988-2009. ⟨10.1111/ele.13778⟩
Journal articles hal-03405358v1
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Meeting fisheries, ecosystem function, and biodiversity goals in a human-dominated world

Joshua Cinner , Jessica Zamborain-Mason , Georgina Gurney , Nicholas Graham , M. Aaron Macneil
Science, 2020, 368 (6488), pp.307-311. ⟨10.1126/science.aax9412⟩
Journal articles hal-03090286v1
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Coral Reef Fish: Not Just a Matter of Beauty!

Elyse Boudin , Frédérique Carcaillet , Anne-Sophie Tribot , Quentin Carabeux , Julie Deter
Frontiers for Young Minds, 2020, 8 (1), ⟨10.3389/frym.2020.00013⟩
Journal articles hal-03003447v1
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Morphological sorting of introduced freshwater fish species within and between donor realms

Guohuan Su , Sébastien Villéger , Sébastien Brosse
Global Ecology and Biogeography, 2020, 29 (5), pp.803-813. ⟨10.1111/geb.13054⟩
Journal articles hal-03093245v1
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Global changes threaten functional and taxonomic diversity of insular species worldwide

Camille Leclerc , Sébastien Villéger , Clara Marino , Céline Bellard
Diversity and Distributions, inPress, ⟨10.1111/ddi.13024⟩
Journal articles hal-02477847v1
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Global patterns and predictors of trophic position, body size and jaw size in fishes

R. Keller Kopf , Jian D. L. Yen , Dale G. Nimmo , Sebastien Brosse , Sébastien Villéger
Global Ecology and Biogeography, 2020, 30 (2), pp.414--428. ⟨10.1111/geb.13227⟩
Journal articles hal-03413613v1
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Exceptional but vulnerable microbial diversity in coral reef animal surface microbiomes

Marlène Chiarello , J.-C. Auguet , Nicholas Graham , Thomas Claverie , Elliott Sucré
Proceedings of the Royal Society B: Biological Sciences, 2020, 287 (1927), pp.20200642. ⟨10.1098/rspb.2020.0642⟩
Journal articles hal-03093105v1
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A new method to control error rates in automated species identification with deep learning algorithms

Sébastien Villon , David Mouillot , Marc Chaumont , Gérard Subsol , Thomas Claverie
Scientific Reports, 2020, 10 (1), ⟨10.1038/s41598-020-67573-7⟩
Journal articles lirmm-03002261v1
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Nutrient limitation, bioenergetics and stoichiometry: A new model to predict elemental fluxes mediated by fishes

Nina M D Schiettekatte , Diego R Barneche , Sébastien Villéger , Jacob E Allgeier , Deron E Burkepile
Functional Ecology, 2020, 34 (9), pp.1857-1869. ⟨10.1111/1365-2435.13618⟩
Journal articles hal-03013820v1
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A global database for metacommunity ecology, integrating species, traits, environment and space

Alienor Jeliazkov , Darko Mijatovic , Stéphane Chantepie , Nigel Andrew , Raphaël Arlettaz
Scientific Data , 2020, 7 (1), pp.6. ⟨10.1038/s41597-019-0344-7⟩
Journal articles hal-02438887v1

High intraspecific variability in morphology and diet in tropical stream fish communities

Luisa Resende Manna , Sebastien Villeger , Carla Ferreira Rezende , Rosana Mazzoni
Ecology of Freshwater Fish, 2019, 28 (1), pp.41-52. ⟨10.1111/eff.12425⟩
Journal articles hal-01994129v1

Morphological diversity of freshwater fishes differs between realms, but morphologically extreme species are widespread

Guohuan Su , Sebastien Villeger , Sebastien Brosse
Global Ecology and Biogeography, 2019, 28 (2), pp.211--221. ⟨10.1111/geb.12843⟩
Journal articles hal-02439848v1
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Interspecific differences in environmental response blur trait dynamics in classic statistical analyses

Matthew Mclean , David Mouillot , Sébastien Villéger , Nicholas a J Graham , Arnaud Auber
Marine Biology, 2019, 166 (12), ⟨10.1007/s00227-019-3602-5⟩
Journal articles hal-03099050v1

Species diversity and composition drive the aesthetic value of coral reef fish assemblages

Anne-Sophie Tribot , Julie Deter , Thomas Claverie , François Guillhaumon , Sébastien Villéger
Biology Letters, 2019, 15 (11), pp.20190703. ⟨10.1098/rsbl.2019.0703⟩
Journal articles hal-03090210v1

Fish communities diverge in species but converge in traits over three decades of warming

Matthew Mclean , David Mouillot , Martin Lindegren , Sebastien Villeger , Georg Engelhard
Global Change Biology, 2019, 25 (11), pp.3972--3984. ⟨10.1111/gcb.14785⟩
Journal articles hal-02439731v1

Trait structure and redundancy determine sensitivity to disturbance in marine fish communities

Matthew Mclean , Arnaud Auber , Nicholas Graham , Peter Houk , Sebastien Villeger
Global Change Biology, 2019, 25 (10), pp.3424-3437. ⟨10.1111/gcb.14662⟩
Journal articles hal-02324196v1
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Interspecific differences in the effect of fish on marine microbial plankton

Sébastien Villéger , Eric Fouilland , Jérémy Argenty , Corinne Bouvier , Claire Carré
Aquatic Microbial Ecology, 2019, 82 (3), pp.289-298. ⟨10.3354/ame01897⟩
Journal articles hal-02105424v1

Accounting for intraspecific diversity when examining relationships between non-native species and functional diversity

T. Zhao , Sébastien Villéger , J. Cucherousset
Oecologia, 2019, 189 (1), pp.171-183. ⟨10.1007/s00442-018-4311-3⟩
Journal articles hal-01993708v1

An attribute-diversity approach to functional diversity, functional beta diversity, and related (dis)similarity measures

Anne Chao , Chun-Huo Chiu , Sebastien Villeger , I.-Fang Sun , Simon Thorn
Ecological monographs, 2019, 89 (2), pp.UNSP e01343. ⟨10.1002/ecm.1343⟩
Journal articles hal-02403272v1
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Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet

Marlene Chiarello , J.-C. Auguet , Yvan Bettarel , Corinne Bouvier , Thomas Claverie
Microbiome, 2018, 6, ⟨10.1186/s40168-018-0530-4⟩
Journal articles hal-02002252v1

Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific

Eva Maire , Sebastien Villeger , Nicholas A. J. Graham , Andrew S. Hoey , Joshua Cinner
Proceedings of the Royal Society B: Biological Sciences, 2018, 285 (1883), ⟨10.1098/rspb.2018.1167⟩
Journal articles hal-02002283v1
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Functional biodiversity loss along natural CO2 gradients

Nuria Teixido , Maria Cristina Gambi , Valeriano Parravacini , Kristy Kroeker , Fiorenza Micheli
Nature Communications, 2018, 9, ⟨10.1038/s41467-018-07592-1⟩
Journal articles hal-01994135v1
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A Deep learning method for accurate and fast identification of coral reef fishes in underwater images

Sebastien Villon , David Mouillot , Marc Chaumont , Emily Darling , Gérard Subsol
Ecological Informatics, 2018, 48, pp.238-244. ⟨10.1016/j.ecoinf.2018.09.007⟩
Journal articles lirmm-01884005v1

Disentangling the pathways of land use impacts on the functional structure of fish assemblages in Amazon streams

Rafael P. Leitao , Jansen Zuanon , David Mouillot , Cecilia G. Leal , Robert M. Hughes
Ecography, 2018, 41 (1), pp.219--232. ⟨10.1111/ecog.02845⟩
Journal articles hal-01826757v1

Functional rarity of coral reef fishes at the global scale: Hotspots and challenges for conservation

Matthias Grenie , David Mouillot , Sebastien Villeger , Pierre Denelle , Caroline M. Tucker
Biological Conservation, 2018, 226, pp.288-299. ⟨10.1016/j.biocon.2018.08.011⟩
Journal articles hal-02002180v1

A Climate-Driven Functional Inversion of Connected Marine Ecosystems

Matthew Mclean , David Mouillot , Martin Lindegren , Georg Engelhard , Sebastien Villeger
Current Biology - CB, 2018, 28 (22), pp.3654+. ⟨10.1016/j.cub.2018.09.050⟩
Journal articles hal-01994182v1

Functional diversity measures revealed impacts of non-native species and habitat degradation on species-poor freshwater fish assemblages

Nicole Colin , Sebastien Villeger , Martin Wilkes , Adolfo De Sostoa , Alberto Maceda-Veiga
Science of the Total Environment, 2018, 625, pp.861--871. ⟨10.1016/j.scitotenv.2017.12.316⟩
Journal articles hal-01826661v1
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Non-native species led to marked shifts in functional diversity of the world freshwater fish faunas

Aurele Toussaint , Nicolas Charpin , Olivier Beauchard , Gael Grenouillet , Thierry Oberdorff
Ecology Letters, 2018, 21 (11), pp.1649-1659. ⟨10.1111/ele.13141⟩
Journal articles hal-02002122v1
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Complementarity of the multidimensional functional and the taxonomic approaches to study phytoplankton communities in three Mediterranean coastal lagoons of different trophic status

A. Leruste , Sébastien Villéger , N. Malet , R. de Wit , B. Bec
Hydrobiologia, 2018, 815 (1), pp.207--227. ⟨10.1007/s10750-018-3565-4⟩
Journal articles hal-01826660v1
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Confronting species aesthetics with ecological functions in coral reef fish

Anne-Sophie Tribot , Quentin Carabeux , Julie Deter , Thomas Claverie , Sebastien Villeger
Scientific Reports, 2018, 8 (1), ⟨10.1038/s41598-018-29637-7⟩
Journal articles hal-02346580v1
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On the risks of using dendrograms to measure functional diversity and multidimensional spaces to measure phylogenetic diversity: a comment on Sobral et al . (2016)

Sébastien Villéger , Eva Maire , Fabien Leprieur
Ecology Letters, 2017, 20 (4), pp.554--557. ⟨10.1111/ele.12750⟩
Journal articles hal-01928114v1
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Captive bottlenose dolphins and killer whales harbor a species-specific skin microbiota that varies among individuals

Marlène Chiarello , Sébastien Villéger , Corinne Bouvier , J.-C. Auguet , Thierry Bouvier
Scientific Reports, 2017, 7 (1), ⟨10.1038/s41598-017-15220-z⟩
Journal articles hal-01929494v1

Functional ecology of fish: current approaches and future challenges

Sébastien Villéger , Sébastien Brosse , Maud Mouchet , David Mouillot , Michael J. Vanni
Aquatic Sciences - Research Across Boundaries, 2017, 79 (4), pp.783--801. ⟨10.1007/s00027-017-0546-z⟩
Journal articles hal-01932917v1

Mare Incognitum: A Glimpse into Future Plankton Diversity and Ecology Research

Guillem Chust , Meike Vogt , Fabio Benedetti , Teofil Nakov , Sébastien Villéger
Frontiers in Marine Science, 2017, 4, pp.68. ⟨10.3389/fmars.2017.00068⟩
Journal articles hal-01545318v1

Biogeographical, environmental and anthropogenic determinants of global patterns in bird taxonomic and trait turnover

Cagan H. Sekercioglu , Jean-Yves Barnagaud , W. Daniel Kissling , Constantinos Tsirogiannis , Vissarion Fisikopoulos
Global Ecology and Biogeography, 2017, 26 (10), pp.1190--1200. ⟨10.1111/geb.12629⟩
Journal articles hal-01932915v1

Biogeographical region and environmental conditions drive functional traits of estuarine fish assemblages worldwide

Sofia Henriques , François Guilhaumon , Sébastien Villéger , Sandra Amoroso , Susana França
Fish and Fisheries, 2017, 18 (4), pp.752--771. ⟨10.1111/faf.12203⟩
Journal articles hal-01932910v1

Rare species contribute disproportionately to the functional structure of species assemblages

Rafael P. Leitão , Jansen Zuanon , Sébastien Villéger , Stephen E. Williams , Christopher Baraloto
Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1828), ⟨10.1098/rspb.2016.0084⟩
Journal articles hal-01532639v1
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Mapping biodiversity in three-dimensions challenges marine conservation strategies: The example of coralligenous assemblages in North-Western Mediterranean Sea

Aggeliki Doxa , Florian Holon , Julie Deter , Sébastien Villéger , Pierre Boissery
Ecological Indicators, 2016, 61 (2), pp.1042--1054. ⟨10.1016/j.ecolind.2015.10.062⟩
Journal articles hal-01444069v1

Worldwide freshwater fish homogenization is driven by a few widespread non-native species

Aurèle Toussaint , Olivier Beauchard , Thierry Oberdorff , Sébastien Brosse , Sébastien Villéger
Biological Invasions, 2016, 18 (5), pp.1295 - 1304. ⟨10.1007/s10530-016-1067-8⟩
Journal articles hal-01926453v1

Increased taxonomic and functional similarity does not increase the trophic similarity of communities

Thomas Pool , Julien Cucherousset , Stéphanie Boulêtreau , Sébastien Villéger , Angela Strecker
Global Ecology and Biogeography, 2016, 25 (1), pp.46 - 54. ⟨10.1111/geb.12384⟩
Journal articles hal-01923719v1
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Global functional diversity of freshwater fish is concentrated in the Neotropics while functional vulnerability is widespread

A. Toussaint , N. Charpin , S. Brosse , S. Villéger
Scientific Reports, 2016, 6, pp.22125. ⟨10.1038/srep22125⟩
Journal articles hal-01926535v1
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Taxonomic and functional diversity increase the aesthetic value of coralligenous reefs

Anne-Sophie Tribot , Nicolas Mouquet , Sébastien Villéger , Michel Raymond , Fabrice Hoff
Scientific Reports, 2016, 6, ⟨10.1038/srep34229⟩
Journal articles hal-03104012v1
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Unexpected high vulnerability of functions in wilderness areas: evidence from coral reef fishes

Stephanie d'Agata , Laurent Vigliola , Nicholas Graham , Laurent Wantiez , Valeriano Parravicini
Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1844), ⟨10.1098/rspb.2016.0128⟩
Journal articles hal-01926552v1
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Coral-associated viruses and bacteria in the Ha Long Bay, Vietnam

The Thu Pham , van Thuoc Chu , Thu Viet Ha Bui , Thanh Thuy Nguyen , Quang Huy Tran
Aquatic Microbial Ecology, 2015, 76 (2), pp.149 - 161. ⟨10.3354/ame01775⟩
Journal articles hal-01921797v1

From current distinctiveness to future homogenization of the world's freshwater fish faunas

Sébastien Villéger , Simon Blanchet , Olivier Beauchard , Thierry Oberdorff , Sébastien Brosse
Diversity and Distributions, 2015, 21 (2), pp.223 - 235. ⟨10.1111/ddi.12242⟩
Journal articles hal-01841305v1

Quantifying the multiple facets of isotopic diversity: New metrics for stable isotope ecology

Julien Cucherousset , Sébastien Villéger
Ecological Indicators, 2015, 56, pp.152 - 160. ⟨10.1016/j.ecolind.2015.03.032⟩
Journal articles hal-01919375v1

How many dimensions are needed to accurately assess functional diversity? A pragmatic approach for assessing the quality of functional spaces

Eva Maire , Gaël Grenouillet , Sébastien Brosse , Sébastien Villéger
Global Ecology and Biogeography, 2015, 24 (6), pp.728 - 740. ⟨10.1111/geb.12299⟩
Journal articles hal-01919339v1

Non-native species modify the isotopic structure of freshwater fish communities across the globe

A. Sagouis , J. Cucherousset , S. Villeger , F. Santoul , S. Boulêtreau
Ecography, 2015, 38 (10), pp.979 - 985. ⟨10.1111/ecog.01348⟩
Journal articles hal-01921807v1

High diversity of skin-associated bacterial communities of marine fishes is promoted by their high variability among body parts, individuals and species

Marlène Chiarello , Sébastien Villéger , Corinne Bouvier , Yvan Bettarel , Thierry Bouvier
FEMS Microbiology Ecology, 2015, 91 (7), ⟨10.1093/femsec/fiv061⟩
Journal articles hal-01841505v1
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Combinations of biological attributes predict temporal dynamics of fish species in response to environmental changes

C. Sirot , S. Villéger , D. Mouillot , Audrey M. Darnaude , J. Ramos-Miranda
Ecological Indicators, 2015, 48, pp.147--156. ⟨10.1016/j.ecolind.2014.07.038⟩
Journal articles hal-01840060v1
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Temporal changes in the taxonomic and functional diversity of fish communities in shallow Chinese lakes: the effects of river-lake connections and aquaculture

Lin Cheng , Simon Blanchet , Géraldine Loot , Sebastien Villéger , Tanglin Zhang
Aquatic Conservation: Marine and Freshwater Ecosystems, 2014, 24 (1), pp.23-34. ⟨10.1002/aqc.2418⟩
Journal articles hal-02965442v1
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Toward a loss of functional diversity in stream fish assemblages under climate change

Laetitia Buisson , Gaël Grenouillet , Sébastien Villéger , Julie Canal , Pascal Laffaille
Global Change Biology, 2013, vol. 19, pp. 387-400. ⟨10.1111/gcb.12056⟩
Journal articles hal-00956411v1
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Colossal Aggregations of Giant Alien Freshwater Fish as a Potential Biogeochemical Hotspot

Stéphanie Boulêtreau , Julien Cucherousset , Sébastien Villéger , Rémi Masson , Frédéric Santoul
PLoS ONE, 2011, vol. 6, ⟨10.1371/journal.pone.0025732⟩
Journal articles hal-00912411v1

Defining and measuring ecological specialization

Vincent Devictor , Joanne Clavel , Romain Julliard , Sébastien Lavergne , David Mouillot
Journal of Applied Ecology, 2010, 47 (1), pp.15-25. ⟨10.1111/j.1365-2664.2009.01744.x⟩
Journal articles hal-02939500v1

New multidimensional functional diversity indices for a multifaceted framework in functional ecology

S. Villeger , N.W.H. Mason , D. Mouillot
Ecology, 2008, 89 (8), pp.2290-2301. ⟨10.1890/07-1206.1⟩
Journal articles hal-02599021v1
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Coupling underwater autonomous vehicles and automatic video analysis for efficient monitoring of coral reef ecosystems: promises and challenges

Thomas Claverie , Marc Chaumont , Karen Godary-Dejean , Adrien Hereau , Lionel Lapierre
ICRS 2021 - 15th International Coral Reef Symposium, Jul 2021, Bremen (virtual), Germany
Conference papers lirmm-03820865v1
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A deep learning algorithm for automatic identification of coral reef fish species on images

Sebastien Villon , David Mouillot , Marc Chaumont , Emily Darling , Gérard Subsol
WCMB: World Conference on Marine Biodiversity, May 2018, Montréal, Canada
Conference papers lirmm-01883997v1
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Quaternion based control for robotic observation of marine diversity

Silvain Louis , Lionel Lapierre , Karen Godary-Dejean , Yadpiroon Onmek , Thomas Claverie
OCEANS, Jun 2017, Aberdeen, United Kingdom. ⟨10.1109/OCEANSE.2017.8085006⟩
Conference papers lirmm-01588991v1
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Formal Method for Mission Controller Generation of a Mobile Robot

Silvain Louis , Karen Godary-Dejean , Lionel Lapierre , Thomas Claverie , Sébastien Villéger
TAROS 2017 - 18th Annual Conference Towards Autonomous Robotic Systems, Jul 2017, Guildford, United Kingdom. pp.586-600, ⟨10.1007/978-3-319-64107-2_48⟩
Conference papers lirmm-01589007v1
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Coral reef fish detection and recognition in underwater videos by supervised machine learning : Comparison between Deep Learning and HOG+SVM methods

Sébastien Villon , Marc Chaumont , Gérard Subsol , Sébastien Villéger , Thomas Claverie
ACIVS: Advanced Concepts for Intelligent Vision Systems, Oct 2016, Lecce, Italy
Conference papers hal-01374123v1