Sibel BERGER

Présentation

Publications

Article dans une revue (14)

Full‐length genome sequencing of RNA viruses—How the approach can enlighten us on hepatitis C and hepatitis E viruses Elodie Laugel,Cédric Hartard,Helene Jeulin,Sibel Berger,Véronique Venardet al. Reviews in Medical Virology, 2020, ⟨10.1002/rmv.2197⟩ Article dans une revue hal-03149680v1
Performance of genotypic algorithms for predicting tropism for HIV-1 CRF01_AE recombinant Cathia Soulié,Laurence Morand-Joubert,Jean-Michel Cottalorda,Charlotte Charpentier,Pantxika Bellecaveet al. Journal of Clinical Virology, 2018, 99-100, pp.57-60. ⟨10.1016/j.jcv.2017.12.014⟩ Article dans une revue hal-01984179v1
The variability of hepatitis B envelope is associated with HBs antigen persistence in either chronic or acute HBV genotype A infection Marine Eschlimann,Brice Malve,Aurélie Velay,Honorine Fenaux,Sibel Bergeret al. Journal of Clinical Virology, 2017, 94, pp.115-122. ⟨10.1016/j.jcv.2017.08.001⟩ Article dans une revue hal-01903775v1
nimH, a novel nitroimidazole resistance gene contributing to metronidazole resistance in Bacteroides fragilis Corentine Alauzet,Sibel Berger,Hélène Jean-Pierre,Luc Dubreuil,Estelle Jumas-Bilaket al. Journal of Antimicrobial Chemotherapy, 2017, 72 (9), pp.2673 - 2675. ⟨10.1093/jac/dkx160⟩ Article dans une revue hal-01895500v1
Optimising the diagnostic strategy for onychomycosis from sample collection to FUNGAL identification evaluation of a diagnostic kit for real-time PCR Dimitri Petinataud,Sibel Berger,Cyril Ferdynus,Anne Debourgogne,Nelly Contet-Audonneauet al. Mycoses, 2016, 59 (5), pp.304-311. ⟨10.1111/myc.12471⟩ Article dans une revue istex hal-02902639v1
Discrimination between Native and Tn 6010 -Associated oqxAB in Klebsiella spp., Raoultella spp., and other Enterobacteriaceae by Using a Two-Step Strategy Thomas Guillard,Anne-Laure Lebreil,Lars Hestbjerg Hansen,Aymric Kisserli,Sibel Bergeret al. Antimicrobial Agents and Chemotherapy, 2015, 59 (9), pp.5838 - 5840. ⟨10.1128/AAC.00669-15⟩ Article dans une revue hal-01481982v1
Interactions between Snow Chemistry, Mercury Inputs and Microbial Population Dynamics in an Arctic Snowpack Catherine Larose,Emmanuel Prestat,Sébastien Cecillon,Sibel Berger,Cédric Malandainet al. PLoS ONE, 2013, 8 (11), pp.e79972. ⟨10.1371/journal.pone.0079972⟩ Article dans une revue hal-00925290v1
Characterization of a new blaOXA-48-carrying plasmid in Enterobacteriaceae. Sibel Berger,Corentine Alauzet,Nejla Aissa,Sandrine Hénard,Christian Rabaudet al. Antimicrobial Agents and Chemotherapy, 2013, 57 (8), pp.4064-7 Article dans une revue hal-01160100v1
Characterization of a New blaOXA-48-Carrying Plasmid in Enterobacteriaceae Sibel Berger,Corentine Alauzet,Nejla Aissa,Sandrine Henard,Christian Rabaudet al. Antimicrobial Agents and Chemotherapy, 2013, 57 (8), pp.4064 - 4067. ⟨10.1128/AAC.02550-12⟩ Article dans une revue hal-01480994v1
Human Pathogens Abundant in the Bacterial Metagenome of Cigarettes Amy R. Sapkota,Sibel Berger,Timothy M. Vogel Environmental Health Perspectives, 2010, 118 (3), pp.351-356. ⟨10.1289/ehp.0901201⟩ Article dans une revue hal-00476194v1
Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard, Norway Catherine Larose,Sibel Berger,Christophe P. Ferrari,Elisabeth Navarro,Aurélien Dommergueet al. Extremophiles, 2010, 14 (2), pp.205-212. ⟨10.1007/s00792-009-0299-2⟩ Article dans une revue istex hal-00476166v1
Genetic instability of whiG gene during the aerial mycelium development of Streptomyces ambofaciens ATCC23877 under different conditions of nitrogen limitations. Magali Genay,Sibel Catakli,Alexandra Kleinclauss,Axelle Andrieux,Bernard Decariset al. Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 2006, 595 (1-2), pp.80-90 Article dans une revue hal-01159911v1
Sigma factor WhiG and its regulation constitute a target of a mutational phenomenon occurring during aerial mycelium growth in Streptomyces ambofaciens ATCC23877. Sibel Catakli,Axelle Andrieux,Bernard Decaris,Annie Dary Research in Microbiology, 2005, 156 (3), pp.328-40 Article dans une revue hal-01159932v1
Spontaneous chromosome circularization and amplification of a new amplifiable unit of DNA belonging to the terminal inverted repeats in Streptomyces ambofaciens ATCC 23877. Sibel Catakli,Axelle Andrieux,Pierre Leblond,Bernard Decaris,Annie Dary Archives of Microbiology, 2003, 179 (6), pp.387-93. ⟨10.1007/s00203-003-0534-7⟩ Article dans une revue istex hal-01159934v1

Communication dans un congrès (14)

Hepatitis E virus emergence in north eastern France Honorine Fenaux,Manon Chassaing,Sibel Berger,H. Jeulin,Mouni Bensenaneet al. 20th Annual Meeting of the European Society for Clinical Virology, 2017, Stresa, Italy Communication dans un congrès hal-02111074v1
Comparison of four commercial real-time PCR assays for detection of Mycobacterium tuberculosis complex, associated or not to detection of anti-tuberculosis drug-resistance genes Sibel Berger,Catherine Laurain,Christine Larcher,Alain Lozniewski,Corentine Alauzet ECCMID 2015 - 25th European Congress of Clinical Microbiology and Infectious Diseases, Apr 2015, Copenhagen, Denmark. page 75/P1194 Communication dans un congrès hal-01247221v1
Comparaison des performances de quatre coffrets de PCR pour la détection du complexe tuberculeux associée ou non à la recherche de gènes de résistance aux antituberculeux Catherine Laurain,Sibel Berger,Christine Larcher,Florent Girardier,Alain Lozniewskiet al. 13èmes Journées de Mycobactériologie de Langue Française, Oct 2014, Dijon, France Communication dans un congrès hal-01247240v1
Comparaison des performances de six coffrets de PCR pour la détection d'agents impliqués dans les pneumopathies atypiques communautaires. Sibel Berger,Julie Desroches,Alain Lozniewski,Corentine Alauzet RICAI 2014 - 34ème Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse, Nov 2014, Paris, France Communication dans un congrès hal-01247191v1
Seasonal changes in snow chemistry lead to new insights into mercury methylation in the Arctic Catherine Larose,Sébastien Cecillon,Emmanuel Prestat,Sibel Berger,Delina Y. Lyonet al. International Polar Year Oslo Conference 2010, Norway: 'Polar Science - Global Impact', Jun 2010, Oslo, Norway Communication dans un congrès hal-00925324v1
ASSESSING INTERACTIONS BETWEEN MERCURY AND MICROBIAL POPULATIONS IN THE SNOWPACK: A METAGENOMIC APPROACH Catherine Larose,Sibel Berger,Christophe P. Ferrari,Elisabeth Navarro,Aurélien Dommergueet al. BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden Communication dans un congrès hal-00399256v1
GENOME FLEXIBILITY ACROSS DIFFERENT STRAINS OF THE HEXACHLOROCYCLANE-DEGRADING BACTERIUM SPHINGOBIUM FRANCENSE SP+ IDENTIFIED BY A GLOBAL APPROACH OF GENOME SEQUENCING AND MICROARRAY COMPARATIVE GENOMIC HYBRIDIZATION Sibel Berger,Sébastien Cecillon,Cécile Thion,Maude M. David,Timothy M Vogel BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden Communication dans un congrès hal-00399182v1
WHERE DO DEHALOGENASES COME FROM ? A MULTIDISCIPLINARY STUDY HIGHLIGHTS THE PRIMARY ROLE OF HORIZONTAL GENE TRANSFER DURING RECENT FUNCTIONAL ADAPTATION Maude M. David,Sibel Berger,Margaux Mesle,Pascal Simonet,Timothy M Vogel BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden Communication dans un congrès hal-00399233v1
Modulation de l’instabilité génétique au cours du développement de Streptomyces ambofaciens et Streptomyces coelicolor par les nutriments Magali Genay,Sibel Catakli Rencontre du club des Actinomycètes, May 2004, Liège, Belgique Communication dans un congrès hal-01161680v1
A mutational phenomenon affecting the regulation of the WhiG sigma factor takes place during the aerial mycelium growth in Streptomyces ambofaciens ATCC23877 Sibel Catakli,Axelle Andrieux,Bernard Decaris,Annie Dary Symposium on Biology of Streptomycetes and related Actinomycetes, Feb 2003, Munster, Germany Communication dans un congrès hal-01161676v1
Genetic instability events ocuring during the development of the colony produce at high frequency a particular class of Whi mutants in Streptomyces ambofaciens ATCC23877 Sibel Catakli,Axelle André,Bernard Decaris,Annie Dary IUMS Congress: The World of Microbes (10th International Congress of Bacteriology and Applied Microbiology, Jul 2002, Paris, France Communication dans un congrès hal-01161667v1
Les papilles dépigmentées produites au cours du développement chez Streptomyces ambofaciens ATCC23877 sont des mutants whi Sibel Catakli,Axelle André,Bernard Decaris,Annie Dary Rencontre du club des Actinomycètes, May 2002, Nancy, France Communication dans un congrès hal-01161672v1
Identification of a new amplifiable unit of DNA located in the Terminal Inverted repeats of the chromosomal DNA of Streptomyces ambofaciens ATCC23877 Sibel Catakli,Axelle André,Pierre Leblond,Bernard Decaris,Annie Dary 12th International Symposium on the Biology of Actinomycetes (ISBA), Aug 2001, Vancouver, Canada Communication dans un congrès hal-01161665v1
Identification d’une nouvelle séquence amplifiable localisée aux extrémités du chromosome de Streptomyces ambofaciens ATCC23877 Sibel Catakli,Axelle André,Pierre Leblond,Bernard Decaris,Annie Dary 4ème colloque des 3R : Réplication, Recombinaison et Réparation, Jul 2001, Gif-sur-Yvette, France Communication dans un congrès hal-01161664v1

Thèse (1)

Action de facteurs génétiques et environnementaux sur la dynamique mutationnelle au cours de la différenciation chez Streptomyces ambofaciens ATCC23877 Sibel Catakli Biochimie [q-bio.BM]. Université Henri Poincaré - Nancy I, 2004. Français. ⟨NNT : ⟩ Thèse tel-00576223v1