Simon ROQUES

Publications

Article dans une revue (14)

Réduction des émissions de méthane entérique chez les ruminants : enjeux, solutions et perspectives à l’échelle de l’animal et des systèmes d’élevage Florence Gondret,Donato Andueza,Mohamed Habibou Assouma,Valérie Berthelot,Didier Boichardet al. INRAE Productions Animales, 2026, 39 (1), pp.9470. ⟨10.20870/productions-animales.2026.39.1.9470⟩ Article dans une revue hal-05526674v1
Current Trends, Future Prospects and Constraints of Whole Microalgae and Their Fractions as a Functional Feed Ingredient for Animals Sietse-Jan Koopmans,Simon Roques,Edoardo Zaccaria,Annemarie Mens,Soumya Kanti Kar Journal of Animal Physiology and Animal Nutrition, 2026, ⟨10.1111/jpn.70042⟩ Article dans une revue hal-05538235v1
Farm conditions shape microbial communities and their association with methane intensity in dairy cattle: insights from the rumen microbiome at the community level Simon Roques,Lisanne Koning,Alex Bossers,Sanne van Gastelen,Dirkjan Schokkeret al. Frontiers in Microbiomes, 2025, 4, pp.1540197. ⟨10.3389/frmbi.2025.1540197⟩ Article dans une revue hal-05116257v1
Evaluation of pure shift NMR methods for the analysis of complex metabolite mixtures with a benchtop NMR spectrometer Joris Mandral,Simon Roques,Jean-Nicolas Dumez,Patrick Giraudeau,Jonathan Farjon Analytical Methods, 2025, 17 (16), pp.3171-3182. ⟨10.1039/d5ay00006h⟩ Article dans une revue hal-05185215v1
Recent Advances in Enteric Methane Mitigation and the Long Road to Sustainable Ruminant Production Simon Roques,Gonzalo Martinez-Fernandez,Yuliaxis Ramayo-Caldas,Milka Popova,Stuart Denmanet al. Annual Review of Animal Biosciences, 2024, 12, pp.321-343. ⟨10.1146/annurev-animal-021022-024931⟩ Article dans une revue hal-04342398v1
New alternative ingredients and genetic selection are the next game changers in rainbow trout nutrition: a metabolomics appraisal Simon Roques,Catherine Deborde,Sandrine Skiba-Cassy,Françoise Médale,Mathilde Dupont-Nivetet al. Scientific Reports, 2023, 13, pp.19634. ⟨10.1038/s41598-023-46809-2⟩ Article dans une revue hal-04305424v1
Influence of agroecology practices on rumen microbiota associated with methane emission in dairy cattle Simon Roques,Lisanne Koning,Johan van Riel,Alex Bossers,Dirkjan Schokkeret al. Animal Feed Science and Technology, 2023, 303, pp.115716. ⟨10.1016/j.anifeedsci.2023.115716⟩ Article dans une revue hal-04182753v1
Effect of Feeding 0.8% Dried Powdered Chlorella vulgaris Biomass on Growth Performance, Immune Response, and Intestinal Morphology during Grower Phase in Broiler Chickens Simon Roques,Sietse-Jan Koopmans,Annemarie Mens,Jan van Harn,Marinus van Krimpenet al. Animals, 2022, 12 (9), pp.1114. ⟨10.3390/ani12091114⟩ Article dans une revue hal-04318596v1
PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management Nils Paulhe,Cécile Canlet,Annelaure Damont,Lindsay Peyriga,Stéphanie Durandet al. Metabolomics, 2022, 18 (6), pp.40. ⟨10.1007/s11306-022-01899-3⟩ Article dans une revue hal-03695453v1
Critical assessment of metabolism and related growth and quality traits in trout fed spirulina-supplemented plant-based diets Simon Roques,Catherine Deborde,Sandrine Skiba-Cassy,Olivier Cala,Yann Marchandet al. Aquaculture, 2022, 553, ⟨10.1016/j.aquaculture.2022.738033⟩ Article dans une revue hal-03592312v1
Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth Simon Roques,Catherine Deborde,Nadege Richard,Yann Marchand,Laurence Larroquetet al. Journal of Nutrition, 2020, 150 (9), pp.2268-2277. ⟨10.1093/jn/nxaa206⟩ Article dans une revue hal-02927022v1
Integrative Metabolomics for Assessing the Effect of Insect (Hermetia illucens) Protein Extract on Rainbow Trout Metabolism Simon Roques,Catherine Deborde,Laurence Guimas,Yann Marchand,Nadege Richardet al. Metabolites, 2020, 10 (3), pp.83. ⟨10.3390/metabo10030083⟩ Article dans une revue hal-02570723v1
Metabolomics and fish nutrition: a review in the context of sustainable feed development Simon Roques,Catherine Deborde,Nadege Richard,Sandrine Skiba-Cassy,Annick Moinget al. Reviews in Aquaculture, 2020, 112 (1), pp.261-282. ⟨10.1111/raq.12316⟩ Article dans une revue (article de synthèse) hal-02141403v1
Characterizing alternative feeds for rainbow trout (O. mykiss) by 1 H NMR metabolomics Simon Roques,Catherine Deborde,Nadège Richard,Luce Sergent,Francis Kurzet al. Metabolomics, 2018, 14 (12), pp.155. ⟨10.1007/s11306-018-1454-5⟩ Article dans une revue hal-02141406v1

Communication dans un congrès (10)

Exploration des relations entre les archées méthanogènes et les bactéries du rumen dans la production de méthane chez les ruminants Charlaine Dechamp,Gérard Xavier Gbenou,Christelle Blavignac,Caroline Vachias,Aurélie Dehornoyet al. 21ème Rencontre des Microbiologistes du Pôle Clermontois, Apr 2025, Clermont-ferrand, France Communication dans un congrès hal-05116308v1
Multi-omic investigation to decipher host-microbiota relationships in dairy cattle in the context of methane inhibition Simon Roques,Jérémy Tournayre,Paul Samir Dou,Hamid Boudra,Benedict Yanibadaet al. 14th International Gut Microbiology Symposium, Jun 2025, Clermont-Ferrand, France Communication dans un congrès hal-05116318v1
Le microbiote des ruminants tiraillé entre attentes de durabilité et de performance des élevages Simon Roques Des microbiotes de l'environnement au microbiote intestinal, Mar 2025, Paris, France Communication dans un congrès hal-05116310v1
Some Advances in Research in Ruminant Nutrition Pierre Nozière,Donato Andueza,René Baumont,Gonzalo Cantalapiedra-Hijar,Paul Douet al. Sommet de l'Elevage 2024, Oct 2024, Cournon d'Auvergne, France Communication dans un congrès hal-04829762v1
RMN métabolomique, aliments et nutrition : quelques exemples de la plateforme Métabolome-MetaboHUB -Bordeaux Catherine Deborde,Blandine Madji Hounoum,Simon Roques,Daniel Jacob,Mickaël Maucourtet al. Animation scientifique : La Résonance Magnétique Nucléaire dans tous ses états…., UR370 QuaPA et PF AgroResonance, INRAE, Jun 2021, distanciel, France Communication dans un congrès hal-03728319v1
NMR-based metabolomics workflow for quality and effect assessment of alternative plant-based diets in rainbow trout. Catherine Deborde,Blandine Madji Hounoum,Daniel Jacob,Mickael Maucourt,Simon Roqueset al. 11èmes JS du Réseau Francophone de Métabolomique et Fluxomique, RFMF, May 2018, Liège, Belgium Communication dans un congrès hal-03058513v1
NMR-based metabolomics at Bordeaux Metabolome Facility: 4 short stories Catherine Deborde,Daniel Jacob,Simon Roques,Léa Roch,Anaïs Claveet al. A Franco-Israeli Symposium in Magnetic Resonance, Jan 2019, Rehovot, Israel Communication dans un congrès hal-02786826v1
Exploring the adaptation of rainbow trout metabolome to novel aquafeeds by H-NMR metabolomics Simon Roques,Catherine Deborde,Nadege Richard,Sandrine Skiba-Cassy,Annick Moinget al. Metabolomics 2019. 15. Annual Conference of the Metabolomics Society, Jun 2019, La Haye, Netherlands Communication dans un congrès hal-02154627v1
1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma profiles Simon Roques,Catherine Deborde,Nadège Richard,Sandrine Skiba-Cassy,Annick Moinget al. World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2018, Montpellier, France. 848 p Communication dans un congrès hal-01913018v1
Integrative 1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma Simon Roques,Catherine Deborde,Nadège Richard,Sandrine Skiba-Cassy,Annick Moinget al. 18. ISFNF International Symposium on Fish Nutrition and Feeding "40 years of research in fish nutrition", Jun 2018, Las Palmas de Gran Canaria, Spain Communication dans un congrès hal-01831458v1

Poster de conférence (8)

THE RELATIONSHIP BETWEEN BUCCAL MICROBIOTA AND METHANE EMISSION OF HOLSTEIN FRIESIAN DAMS AND THEIR CALVES Simon Roques,Sanne Van Gastelen,Harmen Van Laar,Soumya Kanti Kar,Alex Bosseret al. 13th International Gut Microbiology Symposium, Jun 2023, Aberdeen (Ecosse), United Kingdom. Poster de conférence hal-04318618v1
Apport de la métabolomique par 1H-RMN pour le développement de nouveaux aliments chez la truite arc en ciel Simon Roques,Catherine Deborde,Nadège Richard,Sandrine Skiba-Cassy,Annick Moinget al. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. , 2019, 6èmes Journées de la Recherche Filière Piscicole Poster de conférence hal-02179541v1
Metabolomic application in fish nutrition: profiling novel aquaculture feeds and assessing their impact on rainbow trout plasma Simon Roques,Catherine Deborde,Nadège Richard,Sandrine Skiba-Cassy,Annick Moinget al. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018 Poster de conférence hal-02161578v1
NMR-based metabolomics workflow for characterization and effect assessment of alternative plant-based diets on plasma and microbiote in rainbow trout Catherine Deborde,Blandine Madji Hounoum,Daniel Jacob,Mickael Maucourt,Simon Roqueset al. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018 Poster de conférence hal-02160639v1
Evaluation of alternative diets for farmed rainbow trout (Oncorhynchus mykiss) by H-NMR metabolomics Simon Roques,Catherine Deborde,Annick Moing,N. Richard,Y. Marchandet al. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. 2017 Poster de conférence hal-01901341v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillon,Thierry Bertonet al. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016 Poster de conférence hal-02743906v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillon,Thierry Bertonet al. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, Ireland. 2016 Poster de conférence hal-02741696v1
Preliminary results of the first NMR ring test inside MetaboHUB IA project on NMR acquisition and annotation of the NIST standard reference material of human plasma (SRM1950) Catherine Deborde,Mickael Maucourt,Simon Roques,Dominique Rolin,Annick Moinget al. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016 Poster de conférence hal-01886393v1