SOPHIE ROME

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High‐fat diets: You are what you eat….your extracellular vesicles too!

Sophie Rome , Stefano Tacconi
Journal of Extracellular Vesicles, 2024, 13 (1), pp.e12382. ⟨10.1002/jev2.12382⟩
Article dans une revue hal-04379547 v1
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Muscle and Adipose Tissue Communicate with Extracellular Vesicles

Sophie Rome
International Journal of Molecular Sciences, 2022, 23 (13), pp.7052. ⟨10.3390/ijms23137052⟩
Article dans une revue hal-03844141 v1
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Blood-derived miRNA levels are not correlated with metabolic or anthropometric parameters in obese pre-diabetic subjects but with systemic inflammation

P. Paramasivam , Emmanuelle Meugnier , K. Gokulakrishnan , H. Ranjini , L. R. Staimez et al.
PLoS ONE, 2022, 17 (2), pp.e0263479. ⟨10.1371/journal.pone.0263479⟩
Article dans une revue inserm-03752855 v1
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Updating MISEV: Evolving the minimal requirements for studies of extracellular vesicles

K. W. Witwer , D. C. Goberdhan , L. O'Driscoll , C. Théry , J. A. Welsh et al.
Journal of Extracellular Vesicles, 2021, 10 (14), pp.e12182. ⟨10.1002/jev2.12182⟩
Article dans une revue inserm-03582039 v1
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Adipocyte-Derived Extracellular Vesicles: State of the Art

S. Rome , A. Blandin , S. Le Lay
International Journal of Molecular Sciences, 2021, 22 (4), pp.1788. ⟨10.3390/ijms22041788⟩
Article dans une revue (article de synthèse) inserm-03328427 v1
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Adipocyte-derived extracellular vesicles in health and diseases: Nano-packages with vast biological properties

S. Le Lay , S. Rome , X. Loyer , L. Nieto
FASEB BioAdvances, 2021, 3 (6), pp.407-419. ⟨10.1096/fba.2020-00147⟩
Article dans une revue (article de synthèse) inserm-03344398 v1
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Profiling of ob/ob mice skeletal muscle exosome-like vesicles demonstrates combined action of miRNAs, proteins and lipids to modulate lipid homeostasis in recipient cells

Audrey Jalabert , Laura Reininger , Emmanuelle Berger , Yohann Coute , Emmanuelle Meugnier et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-00983-3⟩
Article dans une revue hal-03420029 v1
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Epigenetics in atrial fibrillation: A reappraisal

R. Doñate Puertas , Rakesh Arora , S. Rome , B. Asatryan , H. L. Roderick et al.
Heart Rhythm, 2021, 18 (5), pp.824-832. ⟨10.1016/j.hrthm.2021.01.007⟩
Article dans une revue (article de synthèse) inserm-03344369 v1
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Bis(monoacylglycero)phosphate, a new lipid signature of endosome-derived extracellular vesicles

M. Rabia , V. Leuzy , C. Soulage , A. Durand , B. Fourmaux et al.
Biochimie, 2020, 178, pp.26-38. ⟨10.1016/j.biochi.2020.07.005⟩
Article dans une revue hal-02902561 v1
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Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells

Scheila Gabriele Mucha , Mariana G. Ferrarini , Carol Moraga , Alex Di Genova , Laurent Guyon et al.
Scientific Reports, 2020, 10 (13707), ⟨10.1038/s41598-020-70040-y⟩
Article dans une revue hal-02916844 v1
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Use of Nanovesicles from Orange Juice to Reverse Diet-Induced Gut Modifications in Diet-Induced Obese Mice

Emmanuelle Berger , Pascal Colosetti , Audrey Jalabert , Emmanuelle Meugnier , Oscar Wiklander et al.
Molecular Therapy - Methods and Clinical Development, 2020, 18, pp.880-892. ⟨10.1016/j.omtm.2020.08.009⟩
Article dans une revue hal-02952992 v1
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Obesity paradox in cancer: Is bigger really better?

Beata Ujvari , Camille Jacqueline , Dorothée Missé , Valentin Amar , Jay Fitzpatrick et al.
Evolutionary Applications, 2019, 12 (6), pp.1092-1095. ⟨10.1111/eva.12790⟩
Article dans une revue hal-02433971 v1
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Lymphocyte-derived exosomal microRNAs promote pancreatic beta cell death and may contribute to type 1 diabetes development

Claudiane Guay , Janine K. Kruit , Sophie Rome , Veronique Menoud , Niels L. Mulder et al.
Cell Metabolism, 2019, 29 (2), pp.348-361. ⟨10.1016/j.cmet.2018.09.011⟩
Article dans une revue hal-02620397 v1

Biological properties of plant-derived extracellular vesicles

S. Rome
Food and Function, 2019, 10 (2), pp.529--538. ⟨10.1039/c8fo02295j⟩
Article dans une revue hal-02195201 v1

MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’

P. Prabu , S. Rome , C. Sathishkumar , Caroline Gastebois , Emmanuelle Fouilloux-Meugnier et al.
Diabetes & Metabolism, 2019, 45 (3), pp.276-285. ⟨10.1016/j.diabet.2018.08.004⟩
Article dans une revue hal-02625193 v1
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Skeletal Muscle-Released Extracellular Vesicles: State of the Art

S. Rome , A. Forterre , M. L. Mizgier , K. Bouzakri
Frontiers in Physiology, 2019, 10, pp.13. ⟨10.3389/fphys.2019.00929⟩
Article dans une revue (article de synthèse) hal-02466242 v1

MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’

P. Prabu , Sophie Rome , C. Sathishkumar , Caroline Gastebois , E. Meugnier et al.
Journal of Diabetes & Metabolism, 2018
Article dans une revue hal-01981573 v1
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Analysis of the microRNA signature in left atrium from patients with valvular heart disease reveals their implications in atrial fibrillation

Rosa Donate Puertas , Audrey Jalabert , Emmanuelle Fouilloux-Meugnier , Vanessa Euthine , Philippe Chevalier et al.
PLoS ONE, 2018, 13 (5), ⟨10.1371/journal.pone.0196666⟩
Article dans une revue hal-02626365 v1
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Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

Clotilde Thery , Kenneth Witwer , Elena Aikawa , Maria Jose Alcaraz , Johnathon Anderson et al.
Journal of Extracellular Vesicles, 2018, 7 (1), pp.1535750. ⟨10.1080/20013078.2018.1535750⟩
Article dans une revue hal-02323217 v1

Lymphocyte-Derived Exosomal MicroRNAs Promote Pancreatic beta Cell Death and May Contribute to Type 1 Diabetes Development

C. Guay , J. K. Kruit , Sophie Rome , V. Menoud , N. L. Mulder et al.
Cell Metab, 2018
Article dans une revue hal-02003439 v1
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Changes in diet associated with cancer: An evolutionary perspective

Frederic Thomas , Sophie Rome , Frédéric Mery , Erika H Dawson , Jacques Montagne et al.
Evolutionary Applications, 2017, 10 (7), pp.651-657. ⟨10.1111/eva.12465⟩
Article dans une revue hal-01675822 v1

Atrial fibrillation is associated with hypermethylation in human left atrium, and treatment with decitabine reduces atrial tachyarrhythmias in spontaneously hypertensive rats

R. Doñate Puertas , E. Meugnier , C. Romestaing , C. Rey , E. Morel et al.
Translational Research, The Journal of Laboratory and Clinical Medicine, 2017, 184, pp.57 - 67.e5. ⟨10.1016/j.trsl.2017.03.004⟩
Article dans une revue hal-01621517 v1
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miRNA-375 a Sensor of Glucotoxicity Is Altered in the Serum of Children with Newly Diagnosed Type 1 Diabetes

Lucien Marchand , Audrey Jalabert , Emmanuelle Fouilloux-Meugnier , Kathleen van Den Hende , Nicole Fabien et al.
Journal of diabetes research, 2016, 2016, pp.1-7. ⟨10.1155/2016/1869082⟩
Article dans une revue hal-01850359 v1
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Transition from physical activity to inactivity increases skeletal muscle miR-148b content and triggers insulin resistance

Caroline Gastebois , Stéphanie Chanon , Sophie Rome , Christine Durand , Elise Pelascini et al.
Physiological Reports, 2016, 4 (17), pp.e12902. ⟨10.14814/phy2.12902⟩
Article dans une revue hal-01398592 v1
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Depleting extracellular vesicles from fetal bovine serum alters proliferation and differentiation of skeletal muscle cells in vitro

Hala Aswad , A. Jalabert , Sophie Rome
BMC Biotechnology, 2016, 16, pp.32. ⟨10.1186/s12896-016-0262-0⟩
Article dans une revue hal-01850046 v1

Pathways implicated in tadalafil amelioration of duchenne muscular dystrophy

Valeria de Arcangelis , Georgios Strimpakos , Francesca Gabanella , Nicoletta Corbi , Siro Luvisetto et al.
Journal of Cellular Physiology, 2016, 231 (1), pp.224-232. ⟨10.1002/jcp.25075⟩
Article dans une revue istex hal-01595624 v1

Multiple microRNA regulation of lipoprotein lipase gene abolished by 3'UTR polymorphisms in a triglyceride-lowering haplotype harboring p.Ser474Ter

Cyrielle Caussy , Sybil Charriere , Aline Meirhaeghe , Jean Dallongeville , Etienne Lefai et al.
Atherosclerosis, 2016, 246, pp.280-286. ⟨10.1016/j.atherosclerosis.2016.01.010⟩
Article dans une revue hal-01986056 v1

A TG-associated minor LPL haplotype supresses miR-29 binding on LPL 3'UTR

C. Caussy , S. Charrière , J. Dallongeville , Etienne Lefai , V. Euthine et al.
Atherosclerosis, 2015, 241 (1), pp.e12. ⟨10.1016/j.atherosclerosis.2015.04.059⟩
Article dans une revue hal-02049002 v1

Long-standing arterial hypertension is associated with Pitx2 down-regulation in a rat model of spontaneous atrial tachyarrhythmias

A. Scridon , Emmanuelle Fouilloux-Meugnier , Emmanuelle Loizon , Sophie Rome , C. Julien et al.
EP-Europace, 2015, 17 (1), pp.160-165. ⟨10.1093/europace/euu139⟩
Article dans une revue hal-01602102 v1
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Circulating MiRNAs of 'Asian Indian Phenotype' Identified in Subjects with Impaired Glucose Tolerance and Patients with Type 2 Diabetes

P. Prabu , Sophie Rome , C. Sathishkumar , S. Aravind , B. Mahalingam et al.
PLoS ONE, 2015, 10 (5), pp.e0128372. ⟨10.1371/journal.pone.0128372⟩
Article dans une revue hal-01850471 v1
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Horizontal transfer of exosomal microRNAs transduce apoptotic signals between pancreatic beta-cells

C. Guay , V. Menoud , Sophie Rome , R. Regazzi
Cell Communication and Signaling, 2015, 13, pp.17. ⟨10.1186/s12964-015-0097-7⟩
Article dans une revue hal-01850557 v1
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Use of miRNAs in biofluids as biomarkers in dietary and lifestyle intervention studies

Sophie Rome
Genes Nutr, 2015, 10 (5), pp.483. ⟨10.1007/s12263-015-0483-1⟩
Article dans une revue (article de synthèse) hal-01850660 v1
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Diagnostic Value of Cell-free Circulating MicroRNAs for Obesity and Type 2 Diabetes: A Meta-analysis

Clément Villars , Lucien Marchand , Charles Thivolet , Sophie Rome
J Mol Biomark Diagn, 2015, 6 (6), ⟨10.4172/2155-9929.1000251⟩
Article dans une revue hal-01850534 v1

Robust coordination of cardiac functions from gene co-expression reveals a versatile combinatorial transcriptional control

C. Cerutti , G. Bricca , Sophie Rome , C. Z. Paultre , M. P. Gustin
Mol Biosyst, 2014, 10 (9), pp.2415-25. ⟨10.1039/c4mb00024b⟩
Article dans une revue hal-01859440 v1
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Proteomic Analysis of C2C12 Myoblast and Myotube Exosome-Like Vesicles: A New Paradigm for Myoblast-Myotube Cross Talk?

Alexis Forterre , Audrey Jalabert , Emmanuelle Berger , Mathieu Baudet , Karim Chikh et al.
PLoS ONE, 2014, 9 (1), pp.e84153. ⟨10.1371/journal.pone.0084153⟩
Article dans une revue hal-04186866 v1

Myotube-derived exosomal miRNAs downregulate Sirtuin1 in myoblasts during muscle cell differentiation

A. Forterre , A. Jalabert , Karim Chikh , S. Pesenti , V. Euthine et al.
Cell Cycle, 2014, 13 (1), pp.78-89. ⟨10.4161/cc.26808⟩
Article dans une revue hal-01859385 v1
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Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk?

A. Forterre , A. Jalabert , Eric Berger , M. Baudet , Karim Chikh et al.
PLoS ONE, 2014, 9 (1), pp.e84153. ⟨10.1371/journal.pone.0084153⟩
Article dans une revue hal-01859453 v1

Profiling of circulating microRNAs reveals common microRNAs linked to type 2 diabetes that change with insulin sensitization

Francisco J. Ortega , Josep M. Mercader , José Maria Moreno-Navarrete , Oscar Rovira , Ester Guerra et al.
Diabetes Care, 2014, 37 (5), pp.1375-1383. ⟨10.2337/dc13-1847⟩
Article dans une revue hal-01859430 v1
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Exosomes participate in the alteration of muscle homeostasis during lipid-induced insulin resistance in mice

Hala Aswad , Alexis Forterre , Oscar P. B. Wiklander , Guillaume Vial , Emmanuelle Danty-Berger et al.
Diabetologia, 2014, 57 (10), pp.2155-2164. ⟨10.1007/s00125-014-3337-2⟩
Article dans une revue hal-01376852 v1

An APOA5 3' UTR variant associated with plasma triglycerides triggers APOA5 downregulation by creating a functional miR-485-5p binding site

Cyrielle Caussy , S. Charriere , C. Marcais , M. Di Filippo , A. Sassolas et al.
American Journal of Human Genetics, 2014, 94 (1), pp.129-34. ⟨10.1016/j.ajhg.2013.12.001⟩
Article dans une revue hal-01859007 v1
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Age-dependent myocardial transcriptomic changes in the rat. Novel insights into atrial and ventricular arrhythmias pathogenesis

Alina Scridon , E. Meugnier , Emmanuelle Loizon , Marcel Perian , Sophie Rome et al.
Revista Romana De Medicina De Laborator, 2014, 22 (1), pp.9-23. ⟨10.2478/rrlm-2014-0001⟩
Article dans une revue hal-02638710 v1

Are extracellular microRNAs involved in type 2 diabetes and related pathologies?

Sophie Rome
Clinical Biochemistry, 2013, 46 (10-11), pp.937-945. ⟨10.1016/j.clinbiochem.2013.02.018⟩
Article dans une revue hal-02644278 v1
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Endometrial exosomes/microvesicles in the uterine microenvironment: a new paradigm for embryo-endometrial cross talk at implantation

York Hunt Ng , Sophie Rome , Audrey Jalabert , Alexis Forterre , Harmeet Singh et al.
PLoS ONE, 2013, 8 (3), ⟨10.1371/journal.pone.0058502⟩
Article dans une revue hal-02650910 v1
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SREBP-1 transcription factors regulate skeletal muscle cell size by controlling protein synthesis through myogenic regulatory factors.

Kevin Dessalle , Vanessa Euthine , Stéphanie Chanon , Joffrey de Larichaudy , Isao Fujii et al.
PLoS ONE, 2012, 7 (11), pp.e50878. ⟨10.1371/journal.pone.0050878⟩
Article dans une revue inserm-00809752 v1

MicroRNAs contribute to compensatory β cell expansion during pregnancy and obesity

Cécile Jacovetti , Amar Abderrahmani , Géraldine Parnaud , Jean-Christophe Jonas , Marie-Line Peyot et al.
Journal of Clinical Investigation, 2012, 122 (10), pp.3541-3551. ⟨10.1172/JCI64151⟩
Article dans une revue hal-01982002 v1

alpha v integrin processing interferes with the cross-talk between alpha v beta 5/beta 6 and alpha 2 beta 1 integrins

Céline Defilles , Marie-Pierre Montero , Jean-Claude Lissitzky , Sophie Rome , Carole Siret et al.
Biology of the Cell, 2011, 103 (11), pp.519 - 529. ⟨10.1042/BC20100147⟩
Article dans une revue istex hal-02650190 v1

Gene expression profiling in peripheral blood cells of patients with rheumatoid arthritis in response to anti-TNF-alpha treatments.

E. Meugnier , F. Coury , J. Tebib , C. Ferraro-Peyret , S. Rome et al.
Physiological Genomics, 2011, 43 (7), pp.365-71. ⟨10.1152/physiolgenomics.00127.2010⟩
Article dans une revue hal-00851725 v1
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Analysis of lifestyle and metabolic predictors of visceral obesity with Bayesian Networks.

Alex Aussem , André Tchernof , Sérgio Rodrigues de Morais , Sophie Rome
BMC Bioinformatics, 2010, 11 (1), pp.487. ⟨10.1186/1471-2105-11-487⟩
Article dans une revue inserm-00663887 v1
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A new role for sterol regulatory element binding protein 1 transcription factors in the regulation of muscle mass and muscle cell differentiation.

Virginie Lecomte , Emmanuelle Meugnier , Vanessa Euthine , Christine Durand , Damien Freyssenet et al.
Molecular and Cellular Biology, 2010, 30 (5), pp.1182-98. ⟨10.1128/MCB.00690-09⟩
Article dans une revue inserm-00817651 v1

Transcriptome profiling in response to adiponectin in human cancer-derived cells.

Emmanuelle Berger , Sophie Rome , Nathalie Vega , Claire Ciancia , Hubert Vidal
Physiological Genomics, 2010, 42A (1), pp.61-70. ⟨10.1152/physiolgenomics.00013.2010⟩
Article dans une revue hal-01837861 v1

A New Role for Sterol Regulatory Element Binding Protein 1 Transcription Factors in the Regulation of Muscle Mass and Muscle Cell Differentiation

V. Lecomte , E. Meugnier , V. Euthine , C. Durand , D. Freyssenet et al.
Molecular and Cellular Biology, 2010, 30 (5), pp.1182-1198
Article dans une revue hal-01982021 v1
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The microRNA signature in response to insulin reveals its implication in the transcriptional action of insulin in human skeletal muscle and the role of a sterol regulatory element-binding protein-1c/myocyte enhancer factor 2C pathway.

Aurélie Granjon , Marie-Paule Gustin , Jennifer Rieusset , Etienne Lefai , Emmanuelle Meugnier et al.
Diabetes, 2009, 58 (11), pp.2555-64. ⟨10.2337/db09-0165⟩
Article dans une revue inserm-00808523 v1

Microarray analysis of genes with impaired insulin regulation in the skeletal muscle of type 2 diabetic patients indicates the involvement of basic helix-loop-helix domain-containing, class B, 2 protein (BHLHB2)

Sophie Rome , E. Meugnier , V. Lecomte , V. Berbe , J. Besson et al.
Diabetologia, 2009, 52 (9), pp.1899-1912
Article dans une revue hal-01982031 v1

The microRNA Signature in Response to Insulin Reveals Its Implication in the Transcriptional Action of Insulin in Human Skeletal Muscle and the Role of a Sterol Regulatory Element-Binding Protein-1c/Myocyte Enhancer Factor 2C Pathway

A. Granjon , M.-P. Gustin , Jennifer Rieusset , Etienne Lefai , E. Meugnier et al.
Diabetes, 2009, 58 (11), pp.2555-2564
Article dans une revue hal-01982029 v1
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Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle.

Sophie Rome , Virginie Lecomte , Emmanuelle Meugnier , Jennifer Rieusset , Cyrille Debard et al.
Physiological Genomics, 2008, 34 (3), pp.327-37. ⟨10.1152/physiolgenomics.90211.2008⟩
Article dans une revue inserm-00809732 v1

Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle

Sophie Rome , Virginie Lecomte , Emmanuelle Fouilloux-Meugnier , Jennifer Rieusset , Cyrille Debard et al.
Physiological Genomics, 2008, 34 (3), pp.327-337
Article dans une revue hal-01982035 v1

Treatment for 2 mo with n−3 polyunsaturated fatty acids reduces adiposity and some atherogenic factors but does not improve insulin sensitivity in women with type 2 diabetes: a randomized controlled study

Morvarid Kabir , Geraldine Skurnik , Nadia Naour , Valeria Pechtner , Emmanuelle Fouilloux-Meugnier et al.
The American Journal of Clinical Nutrition, 2007, 86 (6), pp.1670-1679. ⟨10.1093/ajcn/86.5.1670⟩
Article dans une revue hal-01982042 v1

Regulation of gene expression by glucose

Emmanuelle Fouilloux-Meugnier , Sophie Rome , Hubert Vidal
Current Opinion in Clinical Nutrition and Metabolic Care, 2007, 10 (4), pp.518-522. ⟨10.1097/MCO.0b013e3281298fef⟩
Article dans une revue hal-01982045 v1

Changes in Gene Expression in Skeletal Muscle in Response to Fat Overfeeding in Lean Men

Emmanuelle Fouilloux-Meugnier , Cécile Bossu , Myriam Oliel , Sakina Jeanne , Angélique Michaut et al.
Obesity, 2007, 15 (11), pp.2583-2594. ⟨10.1038/oby.2007.310⟩
Article dans une revue hal-01982038 v1

Acute Hyperglycemia Induces a Global Downregulation of Gene Expression in Adipose Tissue and Skeletal Muscle of Healthy Subjects

Emmanuelle Fouilloux-Meugnier , May Faraj , Sophie Rome , Geneviève Beauregard , Angélique Michaut et al.
Diabetes, 2007, 56 (4), pp.992-999. ⟨10.2337/db06-1242⟩
Article dans une revue hal-01982048 v1

Nitrogen-fixing sinorhizobia with Medicago laciniata constitute a novel biovar (bv. medicaginis) of S-meliloti

Maria del Carmen Villegas , Sophie Rome , Lucette Maure , Odile Domergue , Louis Gardan et al.
Systematic and Applied Microbiology, 2006, 29 (7), pp.526-538. ⟨10.1016/j.syapm.2005.12.008⟩
Article dans une revue istex hal-02660976 v1
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Clustering biological annotations and gene expression data to identify putatively co-regulated biological processes.

Corneliu Henegar , Raffaella Cancello , Sophie Rome , Hubert Vidal , Karine Clément et al.
Journal of Bioinformatics and Computational Biology, 2006, 4 (4), pp.833-52. ⟨10.1142/S0219720006002181⟩
Article dans une revue inserm-00147232 v1
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Constraint-based Formal Concept Mining and its Application to Microarray Data Analysis

Jérémy Besson , Céline Robardet , Jean-François Boulicaut , Sophie Rome
Intelligent Data Analysis, 2005, 9 (1), pp.59-82
Article dans une revue hal-01535568 v1

The ubiquitin-proteasome pathway is a new partner for the control of insulin signaling.

Sophie Rome , Emmanuelle Fouilloux-Meugnier , Hubert Vidal
Current Opinion in Clinical Nutrition and Metabolic Care, 2004, 7 (3), pp.249-54
Article dans une revue hal-01982052 v1

Evidence for the absence of an intestinal adaptive mechanism to compensate for C. parvum -induced amino acid malabsorption in suckling rats

A. Topouchian , Jean-François Huneau , L. Barbot , S. Rome , J. Gobert et al.
Parasitology Research, 2003, 91 (3), pp.197-203. ⟨10.1007/s00436-003-0956-9⟩
Article dans une revue istex hal-02179746 v1

The Regionalization of PepT1, NBAT and EAAC1 Transporters in the Small Intestine of Rats Are Unchanged from Birth to Adulthood

Sophie Rome , Laurence Barbot , Eugénie Windsor , Nathalie Kapel , Viviane Tricottet et al.
Journal of Nutrition, 2002, 132 (5), pp.1009-1011. ⟨10.1093/jn/132.5.1009⟩
Article dans une revue hal-02179789 v1

Metabolic evidence for adaptation to a high protein diet in rats

C. Jean , Sophie Rome , Veronique Mathe , J.F. Huneau , N. Aattouri et al.
Journal of Nutrition, 2001, 131, pp.91-98
Article dans une revue hal-02680956 v1

Distribution of phenolic compounds within seed and seedlings of two Vicia faba cvs differing in their seed tannin content, and study of their seed and root phenolic exudations

F. Bekkara , M. Jay , M.R. Viricel , Sophie Rome
Plant and Soil, 1998, 203, pp.27-36. ⟨10.1023/A:1004365913726⟩
Article dans une revue istex hal-02697791 v1

Rapid identification of Medicago nodulating strains by using two oligonucleotide probes complementary to 16S rDNA sequences

Sophie Rome , Jean Claude Cleyet Marel , L.A. Materon , Philippe Normand , B. Brunel
Canadian Journal of Microbiology, 1997, 43 (9), pp.854-861
Article dans une revue hal-02692543 v1

Evidence that two genomic species of Rhizobium are associated with Medicago truncatula

Sophie Rome , B. Brunel , Philippe Normand , M. Fernandez , Jean Claude Cleyet Marel
Archives of Microbiology, 1996, 165 (4), pp.285-288. ⟨10.1007/s002030050328⟩
Article dans une revue istex hal-02698249 v1

Sinorhizobium medicae sp. nov., isolated from annual Medicago spp.

Sophie Rome , M.P. Fernandez , B. Brunel , Philippe Normand , J.C. Cleyet-Marel
International Journal of Systematic Bacteriology, 1996, 46 (4), pp.972-980. ⟨10.1099/00207713-46-4-972⟩
Article dans une revue hal-02696624 v1

Importance des composés phénoliques dans les interactions entre plantes et microorganismes : exemple des relations Rhizobium/légumineuses

Jean Claude Cleyet Marel , Sophie Rome , X. Salducci , J. Wery
Acta Botanica Gallica, 1996, 143 (6), pp.521-529
Article dans une revue hal-02689682 v1

Comparison of nucleotide diversity and symbiotic properties of Rhizobium meliloti populations from annual Medicago species

B. Brunel , Sophie Rome , R. Ziani , Jean Claude Cleyet Marel
FEMS Microbiology Ecology, 1996, 19, pp.71-82
Article dans une revue hal-02685969 v1

PITX2 and atrial fibrillation: from palpitations to methylation

R. Donate Puertas , Sophie Rome , E. Morel , J. Claude , Philippe Chevalier
Congress of the European-Society-of-Cardiology (ESC), European Society of Cardiology., Aug 2015, Londres, United Kingdom
Communication dans un congrès hal-02741227 v1

Recent (1960-2012) and future (2021-2050) major temperature variations in middle mountain areas: comparison between Vercors (Rhône-Alpes, France) and Gaspe Peninsula (Quebec, Canada)

S. Bigot , G. Fortin , F. Raymond , S. Rome , Dominique Dumas
Canadian Association of Geographers (CAG), Session 07: Time-series analysis, variability and trends, 2013, Saint John's, Canada
Communication dans un congrès halshs-01281659 v1

Robust gene selection from microarray data with a novel Markov boundary learning method : Application to diabetes analysis

Alexandre Aussem , Sergio Rodrigues de Morais , Florence Perraud , Sophie Rome
European Conference on Symbolic and Quantitative Approaches to Reasoning with Uncertainty ECSQARU'09, 2009, Verona, Italy. pp.724-735
Communication dans un congrès hal-00383810 v1

Transcriptomique

Jean-François Boulicaut , Federica Calevro , H. Charles , J.M. Fayard , G. Febvay et al.
Journée INSA de Lyon "BioIngénierie / Sciences et Ingénierie du Vivant", 2008, Villeurbanne (France), juillet 2008, France. pp.1-1
Communication dans un congrès hal-00391255 v1

Recherche de groupes de gènes intéressants dans des données d'expression: apport des ensembles fréquents

Olivier Gandrillon , Jean-François Boulicaut , Céline Robardet , Sylvain Blachon , Jérémy Besson et al.
Atelier Fouille de données biopuces à EGC 2003, Lyon, 22 janvier 2003, Jan 2003, lyon, France
Communication dans un congrès hal-01535497 v1

Faisabilité des extractions d'ensembles fréquents dans des données biopuces : éléments de solution

J.-F. Boulicaut , François Rioult , J. Besson , Bruno Crémilleux , S. Rome
Journées post-génomiques de la Doua (JPGD'03), 2003, France
Communication dans un congrès hal-00324828 v1

Structure bactérienne clonale ou panmictique des populations de Sinorhizobium meliloti, symbiote des luzernes ?

B. Brunel , Sophie Rome , Lucette Mauré , T. Elali , Jean Claude Cleyet Marel
Symposium Biodiversité et fonctionnement des ecosystèmes, Jun 1996, Paris, France
Communication dans un congrès hal-02771670 v1

Rapid identification of the two species of Sinorhizobium which nodulate Medicago using two oligonucleotide probes complementary to 16S rRNA genes

Sophie Rome , B. Brunel , L.A. Materon , Philippe Normand , Jean Claude Cleyet Marel
11. Australian nitrogen fixation conference, Sep 1996, Australia
Communication dans un congrès hal-02764790 v1

Diversité des souches de Rhizobium associées au genre Medicago

B. Brunel , Sophie Rome , Lucette Mauré , Jean Claude Cleyet Marel
2. Rencontres de phytobactériologie, Feb 1996, Aussois, France
Communication dans un congrès hal-02771147 v1

Age-dependent transcriptomic changes in the rat heart. Implications for cardiac arrhythmogenesis

Alina Scridon , E. Meugnier , Emmanuelle Loizon , Sophie Rome , Claude Julien et al.
ESC Congress 2014, Jul 2014, Barcelone, Spain. Cardiovascular Research, 103, 2014, Third Congress of the ESC-Council-on-Basic-Cardiovascular-Science, Frontiers in Cardio Vascular Biology 2014, Barcelona. ⟨10.1093/cvr/cvu098.10⟩
Poster de conférence hal-02740041 v1

Using pattern discovery techniques in computational biology to discover new putative transcription factor binding sites in the promoter sequences of insulin-regulated genes

Ieva Mitasiunaite , Jérémy Besson , Emmanuelle Meugnier , Jean-François Boulicaut , Hubert Vidal et al.
Integrative Post-Genomics, IPG'05, Dec 2005, Lyon, France. 2005
Poster de conférence hal-01614639 v1

Resolving transcription network from microarray data with constraint-based formal concept mining

Jérémy Besson , Emmanuelle Meugnier , Jean-François Boulicaut , Etienne Lefai , Hubert Vidal et al.
Ouvertes Biologie Informatique Mathématiques, JOBIM'05, Jul 2005, Lyon, France. pp.1-2, 2005
Poster de conférence hal-01614548 v1

L'analyse du transcriptome de muscles au cours d'un clamp hyperinsulinémique révèle une profonde altération de la régulation transcriptionelle chez les patients diabétiques de type 2

E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , V. Pelloux et al.
Réunion Scientifique de l'ALFEDIAM et ALFEDIAM paramédical, Mar 2005, Lyon, France. 2005
Poster de conférence hal-01584233 v1

Extraction of relevant transcription modules using pattern discovery

Jérémy Besson , Céline Robardet , E. Meugnier , Sophie Rome , Jean-François Boulicaut
Integrative Post-Genomics, IPG'04, Oct 2004, Lyon, France. 2004
Poster de conférence hal-01614796 v1

Mise en évidence d'une profonde altération de l'expression de gènes en réponse à l'insuline dans le muscle de patients diabétiques de type II. Screening à large echelle en utilisant des puces à ADNpangénomique

E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , J.-P. Riou et al.
Réunion Scientifique de l'ALFEDIAM et ALFEDIAM paramédical, Mar 2004, Nice, France. 2004
Poster de conférence hal-01584209 v1

L'analyse du transcriptome de muscles de patients obèses et diabétiques de type 2 révèle une profonde altération transcriptionnelle en situation d'insulino-résistance au cours d'un clamp hyperinsulinémique

E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , V. Pelloux et al.
AFERO, Nov 2004, Nancy, France. 2004
Poster de conférence hal-01585537 v1

Expression Profiling in Muscle of Type 2 Diabetic Patients during hyperinsulinemia provides new tracks to decipher the molecular defects of insuline resistance in human skeletal muscle

E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , J.-P. Riou et al.
Integrative Post-Genomics, IPG'04, Oct 2004, Lyon, France. 2004
Poster de conférence hal-01584195 v1

Sinorhizobia efficient with M Laciniata constitute a novel biovar (BV Laciniata) of S. Meliloti

B. Brunel , M. del Carmen Villegas , Sophie Rome , Lucette Mauré , Odile Domergue et al.
4. European nitrogen fixation conference, Sep 2000, Seville, Spain. 1 p., 2000
Poster de conférence hal-02839359 v1

Characterization of the glutamate transporter gene from human placenta

Sophie Rome , H.C. Mertani , P.E. Lobie , D. Tome , K.O. Lee
80. Annual meeting of the Endocrine Society (Endo'98), Jun 1998, Nouvelle-Orléans, United States. 1 p., 1998
Poster de conférence hal-02834878 v1
Image document

Les données d’expression

Nancie Reymond , Hubert Charles , Sophie Rome , Jacques Marti
Informatique pour l’analyse du transcriptome, Hermes Science Publications, pp.45-65, 2004, 2-7462-0850-4
Chapitre d'ouvrage hal-03506005 v1

Solutions pour le calcul d'ensembles fréquents dans des données biopuces

Jérémy Besson , François Rioult , Bruno Crémilleux , Sophie Rome , Jean-François Boulicaut
Informatique pour l'analyse du transcriptome, Hermès, pp.231-254, 2004, Traité IC2 : information-commande-communication, 2-7462-0850-4
Chapitre d'ouvrage hal-00324818 v1