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Thomas Gregor

28
Documents

Publications

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Growth produces coordination trade-offs in Trichoplax adhaerens, an animal lacking a central nervous system

Mircea R Davidescu , Pawel Romanczuk , Thomas Gregor , Iain D. Couzin
Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (11), pp.e2206163120. ⟨10.1073/pnas.2206163120⟩
Article dans une revue pasteur-04027931v1
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Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome

David B Brueckner , Hongtao Chen , Lev Barinov , Benjamin Zoller , Thomas Gregor
Science, 2023, 380 (6652), pp.1357-1362. ⟨10.1126/science.adf5568⟩
Article dans une revue pasteur-03988837v2

Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project

Job Dekker , Frank Alber , Sarah Aufmkolk , Brian J Beliveau , Benoit G Bruneau
Molecular Cell, 2023, 83 (15), pp.2624-2640. ⟨10.1016/j.molcel.2023.06.018⟩
Article dans une revue hal-04190299v1
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Functional analysis of the Drosophila eve locus in response to non-canonical combinations of gap gene expression levels

Netta Haroush , Michal Levo , Eric Wieschaus , Thomas Gregor
Developmental Cell, inPress, ⟨10.1016/j.devcel.2023.10.001⟩
Article dans une revue pasteur-04190268v2
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Structured foraging of soil predators unveils functional responses to bacterial defenses

Fernando W. Rossine , Gabriel Vercelli , Corina E. Tarnita , Thomas Gregor
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (52), pp.e2210995119. ⟨10.1073/pnas.2210995119⟩
Article dans une revue pasteur-03896786v2
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Eukaryotic gene regulation at equilibrium, or non?

Benjamin Zoller , Thomas Gregor , Gašper Tkačik
Current Opinion in Systems Biology, 2022, 31, pp.100435. ⟨10.1016/j.coisb.2022.100435⟩
Article dans une revue pasteur-03896762v1

Temporally dynamic antagonism between transcription and chromatin compaction controls stochastic photoreceptor specification in flies

Lukas Voortman , Caitlin Anderson , Elizabeth Urban , Luorongxin Yuan , Sang Tran
Developmental Cell, 2022, 57 (15), pp.1817-1832.e5. ⟨10.1016/j.devcel.2022.06.016⟩
Article dans une revue pasteur-03896740v1
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Latent space of a small genetic network: Geometry of dynamics and information

Rabea Seyboldt , Juliette Lavoie , Adrien Henry , Jules Vanaret , Mariela Petkova
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (26), pp.e2113651119. ⟨10.1073/pnas.2113651119⟩
Article dans une revue pasteur-03896725v1
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Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation

Anand Singh , Ping Wu , Sergey Ryabichko , João Raimundo , Michael Swan
Cell Reports, 2022, 38 (12), pp.110543. ⟨10.1016/j.celrep.2022.110543⟩
Article dans une revue hal-03896657v1

Transcriptional coupling of distant regulatory genes in living embryos

Michal Levo , João Raimundo , Xin Yang Bing , Zachary Sisco , Philippe Batut
Nature, 2022, 605 (7911), pp.754-760. ⟨10.1038/s41586-022-04680-7⟩
Article dans une revue pasteur-03896691v1
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The impact of space and time on the functional output of the nucleus

Marcelo Nollmann , Isma Bennabi , Markus Götz , Thomas Gregor
Cold Spring Harbor Perspectives in Biology, 2021, pp.a040378. ⟨10.1101/cshperspect.a040378⟩
Article dans une revue hal-03432715v1

Physics meets biology: The joining of two forces to further our understanding of cellular function

Michelle Wang , Mario Nicodemi , Nynke Dekker , Thomas Gregor , David Holcman
Molecular Cell, 2021, 81 (15), pp.3033-3037. ⟨10.1016/j.molcel.2021.07.009⟩
Article dans une revue pasteur-03896644v1
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Trading bits in the readout from a genetic network

Marianne Bauer , Mariela D Petkova , Thomas Gregor , Eric F Wieschaus , William Bialek
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (46), pp.e2109011118. ⟨10.1073/pnas.2109011118⟩
Article dans une revue pasteur-03216308v2
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The many bits of positional information

Gašper Tkačik , Thomas Gregor
Development (Cambridge, England), 2021, 148 (2), ⟨10.1242/dev.176065⟩
Article dans une revue pasteur-03213416v1
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Eco-evolutionary significance of “loners”

Fernando W Rossine , Ricardo Martinez-Garcia , Allyson E Sgro , Thomas Gregor , Corina E Tarnita
PLoS Biology, 2020, 18, ⟨10.1371/journal.pbio.3000642⟩
Article dans une revue pasteur-03216299v1
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Optimal Decoding of Cellular Identities in a Genetic Network

Mariela D Petkova , Gašper Tkačik , William Bialek , Eric F Wieschaus , Thomas Gregor
Cell, 2019, 176 (4), pp.844 - 855.e15. ⟨10.1016/j.cell.2019.01.007⟩
Article dans une revue pasteur-03216294v1

Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting

Benjamin Zoller , Shawn Little , Thomas Gregor
Cell, 2018, 175 (3), pp.835-847.e25. ⟨10.1016/j.cell.2018.09.056⟩
Article dans une revue pasteur-03869446v1

Dynamic interplay between enhancer–promoter topology and gene activity

Hongtao Chen , Michal Levo , Lev Barinov , Miki Fujioka , James Jaynes
Nature Genetics, 2018, 50 (9), pp.1296-1303. ⟨10.1038/s41588-018-0175-z⟩
Article dans une revue pasteur-03869431v1
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The impact of space and time on the functional output of the nucleus

Marcelo Nollmann , Isma Bennabi , Markus Götz , Thomas Gregor
Ana Pombo; Martin Hetzer; Tom Misteli. Nucleus, 2nd ed., Cold Spring Harbor laboratory press, 2021, 978-1-621823-89-6
Chapitre d'ouvrage pasteur-03216312v1

Using RNA Tags for Multicolor Live Imaging of Chromatin Loci and Transcription in Drosophila Embryos

Hongtao Chen , Thomas Gregor
Manfred Heinlein. RNA tagging : methods and protocols, 2166, pp.373 - 384, 2020, Methods in molecular biology, 978-1-0716-0712-1. ⟨10.1007/978-1-0716-0712-1_22⟩
Chapitre d'ouvrage pasteur-03213923v1

Single mRNA Molecule Detection in Drosophila

Shawn Little , Thomas Gregor
RNA Detection, 1649, Springer New York, pp.127-142, 2018, Methods in Molecular Biology, ⟨10.1007/978-1-4939-7213-5_8⟩
Chapitre d'ouvrage pasteur-03869357v1