Thomas Gregor

28

Documents

Publications

	Functional analysis of the Drosophila eve locus in response to non-canonical combinations of gap gene expression levels Netta Haroush , Michal Levo , Eric Wieschaus , Thomas Gregor Developmental Cell, 2023, 58 (23), pp.2789-2801.e5. ⟨10.1016/j.devcel.2023.10.001⟩ Journal articles pasteur-04190268v2
	Growth produces coordination trade-offs in Trichoplax adhaerens, an animal lacking a central nervous system Mircea R Davidescu , Pawel Romanczuk , Thomas Gregor , Iain D. Couzin Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (11), pp.e2206163120. ⟨10.1073/pnas.2206163120⟩ Journal articles pasteur-04027931v1
	Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome David B Brueckner , Hongtao Chen , Lev Barinov , Benjamin Zoller , Thomas Gregor Science, 2023, 380 (6652), pp.1357-1362. ⟨10.1126/science.adf5568⟩ Journal articles pasteur-03988837v2
	Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project Job Dekker , Frank Alber , Sarah Aufmkolk , Brian J Beliveau , Benoit G Bruneau Molecular Cell, 2023, 83 (15), pp.2624-2640. ⟨10.1016/j.molcel.2023.06.018⟩ Journal articles hal-04190299v1
	Structured foraging of soil predators unveils functional responses to bacterial defenses Fernando W. Rossine , Gabriel Vercelli , Corina E. Tarnita , Thomas Gregor Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (52), pp.e2210995119. ⟨10.1073/pnas.2210995119⟩ Journal articles pasteur-03896786v2
	Latent space of a small genetic network: Geometry of dynamics and information Rabea Seyboldt , Juliette Lavoie , Adrien Henry , Jules Vanaret , Mariela Petkova Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (26), pp.e2113651119. ⟨10.1073/pnas.2113651119⟩ Journal articles pasteur-03896725v1
	Temporally dynamic antagonism between transcription and chromatin compaction controls stochastic photoreceptor specification in flies Lukas Voortman , Caitlin Anderson , Elizabeth Urban , Luorongxin Yuan , Sang Tran Developmental Cell, 2022, 57 (15), pp.1817-1832.e5. ⟨10.1016/j.devcel.2022.06.016⟩ Journal articles pasteur-03896740v1
	Transcriptional coupling of distant regulatory genes in living embryos Michal Levo , João Raimundo , Xin Yang Bing , Zachary Sisco , Philippe Batut Nature, 2022, 605 (7911), pp.754-760. ⟨10.1038/s41586-022-04680-7⟩ Journal articles pasteur-03896691v1
	Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation Anand Singh , Ping Wu , Sergey Ryabichko , João Raimundo , Michael Swan Cell Reports, 2022, 38 (12), pp.110543. ⟨10.1016/j.celrep.2022.110543⟩ Journal articles hal-03896657v1
	Eukaryotic gene regulation at equilibrium, or non? Benjamin Zoller , Thomas Gregor , Gašper Tkačik Current Opinion in Systems Biology, 2022, 31, pp.100435. ⟨10.1016/j.coisb.2022.100435⟩ Journal articles pasteur-03896762v1
	The many bits of positional information Gašper Tkačik , Thomas Gregor Development (Cambridge, England), 2021, 148 (2), ⟨10.1242/dev.176065⟩ Journal articles pasteur-03213416v1
	Physics meets biology: The joining of two forces to further our understanding of cellular function Michelle Wang , Mario Nicodemi , Nynke Dekker , Thomas Gregor , David Holcman Molecular Cell, 2021, 81 (15), pp.3033-3037. ⟨10.1016/j.molcel.2021.07.009⟩ Journal articles pasteur-03896644v1
	The impact of space and time on the functional output of the nucleus Marcelo Nollmann , Isma Bennabi , Markus Götz , Thomas Gregor Cold Spring Harbor Perspectives in Biology, 2021, pp.a040378. ⟨10.1101/cshperspect.a040378⟩ Journal articles hal-03432715v1
	Trading bits in the readout from a genetic network Marianne Bauer , Mariela D Petkova , Thomas Gregor , Eric F Wieschaus , William Bialek Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (46), pp.e2109011118. ⟨10.1073/pnas.2109011118⟩ Journal articles pasteur-03216308v2
	Eco-evolutionary significance of “loners” Fernando W Rossine , Ricardo Martinez-Garcia , Allyson E Sgro , Thomas Gregor , Corina E Tarnita PLoS Biology, 2020, 18, ⟨10.1371/journal.pbio.3000642⟩ Journal articles pasteur-03216299v1
	Optimal Decoding of Cellular Identities in a Genetic Network Mariela D Petkova , Gašper Tkačik , William Bialek , Eric F Wieschaus , Thomas Gregor Cell, 2019, 176 (4), pp.844 - 855.e15. ⟨10.1016/j.cell.2019.01.007⟩ Journal articles pasteur-03216294v1
	Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting Benjamin Zoller , Shawn Little , Thomas Gregor Cell, 2018, 175 (3), pp.835-847.e25. ⟨10.1016/j.cell.2018.09.056⟩ Journal articles pasteur-03869446v1
	Dynamic interplay between enhancer–promoter topology and gene activity Hongtao Chen , Michal Levo , Lev Barinov , Miki Fujioka , James Jaynes Nature Genetics, 2018, 50 (9), pp.1296-1303. ⟨10.1038/s41588-018-0175-z⟩ Journal articles pasteur-03869431v1

	The impact of space and time on the functional output of the nucleus Marcelo Nollmann , Isma Bennabi , Markus Götz , Thomas Gregor Ana Pombo; Martin Hetzer; Tom Misteli. Nucleus, 2nd ed., Cold Spring Harbor laboratory press, 2021, 978-1-621823-89-6 Book sections pasteur-03216312v1
	Using RNA Tags for Multicolor Live Imaging of Chromatin Loci and Transcription in Drosophila Embryos Hongtao Chen , Thomas Gregor Manfred Heinlein. RNA tagging : methods and protocols, 2166, pp.373 - 384, 2020, Methods in molecular biology, 978-1-0716-0712-1. ⟨10.1007/978-1-0716-0712-1_22⟩ Book sections pasteur-03213923v1
	Single mRNA Molecule Detection in Drosophila Shawn Little , Thomas Gregor RNA Detection, 1649, Springer New York, pp.127-142, 2018, Methods in Molecular Biology, ⟨10.1007/978-1-4939-7213-5_8⟩ Book sections pasteur-03869357v1

	Scale invariance in early embryonic development Miloš Nikolić , Victoria Antonetti , Feng Liu , Gentian Muhaxheri , Mariela Petkova 2024 Preprints, Working Papers, ... pasteur-04371157v1
	Deriving a genetic regulatory network from an optimization principle Thomas R Sokolowski , Thomas Gregor , William Bialek , Gašper Tkačik 2023 Preprints, Working Papers, ... pasteur-03988951v1
	Precise and scalable self-organization in mammalian pseudo-embryos Melody Merle , Leah Friedman , Corinne Chureau , Thomas Gregor 2023 Preprints, Working Papers, ... pasteur-04116777v1
	Finding the last bits of positional information Lauren Mcgough , Helena Casademunt , Miloš Nikolić , Mariela Petkova , Thomas Gregor 2023 Preprints, Working Papers, ... pasteur-04349957v1
	Common bursting relationships underlie eukaryotic transcription dynamics Po-Ta Chen , Benjamin Zoller , Michal Levo , Thomas Gregor 2023 Preprints, Working Papers, ... pasteur-04116784v1
	Transcription-dependent spatial organization of a gene locus Lev Barinov , Sergey Ryabichko , William Bialek , Thomas Gregor 2020 Preprints, Working Papers, ... pasteur-03213927v1
	Action at a distance in transcriptional regulation William Bialek , Thomas Gregor , Gašper Tkačik 2019 Preprints, Working Papers, ... pasteur-03216303v1