Thomas POMMIER

Documents

Publications

	Diverse organic carbon activates soil microbiome functioning via niche modulation Thomas Pommier Soil Ecology Letters, 2023, 5 (4), pp.230180. ⟨10.1007/s42832-023-0180-8⟩ Journal articles hal-04205972v1
	Microbiome analysis in Lascaux Cave in relation to black stain alterations of rock surfaces and collembola Lise Alonso , Thomas Pommier , Laurent Simon , Flavien Maucourt , Jeanne Doré Environmental Microbiology Reports, 2023, 15 (2), pp.80-91. ⟨10.1111/1758-2229.13133⟩ Journal articles hal-04255508v1
	Larval density in the invasive Drosophila suzukii : Immediate and delayed effects on life‐history traits Alicia Reyes‐ramírez , Zaïnab Belgaidi , Patricia Gibert , Thomas Pommier , Aurélie Siberchicot Ecology and Evolution, 2023, 13 (8), pp.e10433. ⟨10.1002/ece3.10433⟩ Journal articles hal-04206242v1
	Early spring snowmelt and summer droughts strongly impair the resilience of bacterial community and N cycling functions in a subalpine grassland ecosystem Farhan Hafeez , Jean‐christophe Clément , Lionel Bernard , Franck Poly , Thomas Pommier Oikos, 2023, 2023 (7), ⟨10.1111/oik.09836⟩ Journal articles hal-04152883v1
	Overland flow during a storm event strongly affects stream water chemistry and bacterial community structure Huong T. Le , Thomas Pommier , Olivier Ribolzi , Bounsamay Soulileuth , Sylvain Huon Aquatic Sciences - Research Across Boundaries, 2022, 84 (1), pp.7. ⟨10.1007/s00027-021-00839-y⟩ Journal articles hal-04205924v1
	Resource availability drives bacteria community resistance to pathogen invasion via altering bacterial pairwise interactions Mei Li , Thomas Pommier , Yue Yin , Wenhui Cao , Xiaohui Zhang Environmental Microbiology, 2022, ⟨10.1111/1462-2920.16184⟩ Journal articles hal-03776248v1
	Escherichia coli concentration, multiscale monitoring over the decade 2011-2021 in the Mekong River basin, Lao PDR Laurie Boithias , Olivier Ribolzi , Emma Rochelle-Newall , Chanthanousone Thammahacksa , Paty Nakhle Earth System Science Data, 2022, 14, pp.2883-2894. ⟨10.5194/essd-14-2883-2022⟩ Journal articles insu-03721926v1
	Microbiome Analysis of New, Insidious Cave Wall Alterations in the Apse of Lascaux Cave Lise Alonso , Thomas Pommier , Danis Abrouk , Mylène Hugoni , Van Tran Van Microorganisms, 2022, 10 (12), pp.2449. ⟨10.3390/microorganisms10122449⟩ Journal articles hal-04032220v1
	Microbial ecology of tourist Paleolithic caves Zélia Bontemps , Lise Alonso , Thomas Pommier , Mylène Hugoni , Yvan Moënne-Loccoz Science of the Total Environment, 2022, 816, pp.151492. ⟨10.1016/j.scitotenv.2021.151492⟩ Journal articles hal-03472792v1
	Indirect reduction of Ralstonia solanacearum via pathogen helper inhibition Mei Li , Thomas Pommier , Yue Yin , Jianing Wang , Shaohua Gu The International Society of Microbiologial Ecology Journal, 2022, 16 (3), pp.868-875. ⟨10.1038/s41396-021-01126-2⟩ Journal articles hal-03629466v1
	Quantifying the effect of overland flow on Escherichia coli pulses during floods: use of a tracer-based approach in an erosion-prone tropical catchment Laurie Boithias , Olivier Ribolzi , Guillaume Lacombe , Chanthamousone Thammahacksa , Norbert Silvera Journal of Hydrology, 2021, 594, pp.125935. ⟨10.1016/j.jhydrol.2020.125935⟩ Journal articles hal-03093896v1
	Plant functional trait variability and trait syndromes among wheat varieties: the footprint of artificial selection Amélie Cantarel , Vincent Allard , Bruno Andrieu , Sébastien Barot , Jérôme Enjalbert Journal of Experimental Botany, 2021, 72 (4), pp.1166-1180. ⟨10.1093/jxb/eraa491⟩ Journal articles hal-03121526v1
	Rhizosphere immunity: targeting the underground for sustainable plant health management Zhong Wei , Ville-Petri Friman , Thomas Pommier , Stefan Geisen , Alexandre Jousset Frontiers of Agricultural Science and Engineering, 2020, 7 (3), pp.317-328. ⟨10.15302/J-FASE-2020346⟩ Journal articles hal-02945887v1
	Land use strongly influences soil organic carbon and bacterial community export in runoff in tropical uplands Huong T. Le , Emma Rochelle Newall , Olivier Ribolzi , Jean Louis Janeau , Sylvain Huon Land Degradation and Development, 2020, 31 (1), pp.118-132. ⟨10.1002/ldr.3433⟩ Journal articles hal-02624058v1
	Siderophore-Mediated Interactions Determine the Disease Suppressiveness of Microbial Consortia Shaohua Gu , Tianjie Yang , Zhengying Shao , Tao Wang , Kehao Cao mSystems, 2020 Journal articles hal-02945889v1
	Mangrove facies drives resistance and resilience of sediment microbes exposed to anthropic disturbance Cécile Capdeville , Thomas Pommier , Jonathan Gervaix , François Fromard , Jean-Luc Rols Frontiers in Microbiology, 2019, 9, ⟨10.3389/fmicb.2018.03337⟩ Journal articles hal-02268918v1
	Different groups of nitrite-reducers and N2O-reducers have distinct ecological niches and functional roles in West African cultivated soils Feline L. Assemien , Amélie Cantarel , Alessandro Florio , Catherine Lerondelle , Thomas Pommier Soil Biology and Biochemistry, 2019, 129, pp.39-47. ⟨10.1016/j.soilbio.2018.11.003⟩ Journal articles hal-02269507v1
	Anthropization level of Lascaux Cave microbiome shown by regional‐scale comparisons of pristine and anthropized caves Lise Alonso , Thomas Pommier , Bernard Kaufmann , Audrey Dubost , David Chapulliot Molecular Ecology, 2019, 28 (14), pp.3383-3394. ⟨10.1111/mec.15144⟩ Journal articles hal-02310389v1
	Facilitation promotes invasions in plant-associated microbial communities Mei Li , Zhong Wei , Jianing Wang , Alexandre Jousset , Ville-Petri Friman Ecology Letters, 2019, 22 (1), pp.149-158. ⟨10.1111/ele.13177⟩ Journal articles hal-02622620v1
	Soil legacy effects of climatic stress, management and plant functional composition on microbial communities influence the response of Lolium perenne to a new drought event Nicolas Legay , Gabin Piton , Cindy Arnoldi , Lionel Bernard , Marie-Noelle Binet Plant and Soil, 2018, 424 (1-2), pp.233-254. ⟨10.1007/s11104-017-3403-x⟩ Journal articles hal-01688479v1
	Vicinal land use change strongly drives stream bacterial community in a tropical montane catchment Huong T Le , Emma Rochelle-Newall , Yves Auda , Olivier Ribolzi , Oloth Sengtaheuanghoung FEMS Microbiology Ecology, 2018, 94 (11), ⟨10.1093/femsec/fiy155⟩ Journal articles hal-02479068v1
	Rock substrate rather than black stain alterations drives microbial community structure in the passage of Lascaux Cave Lise Alonso , Charline Creuzé-Des-Châtelliers , Théo Trabac , Audrey Dubost , Yvan Moenne-Loccoz Microbiome, 2018, 6, pp.1-15. ⟨10.1186/s40168-018-0599-9⟩ Journal articles hal-02154637v1
	The added value of including key microbial traits to determine nitrogen-related ecosystem services in managed grasslands Thomas Pommier , Amélie A. M. Cantarel , Karl Grigulis , Sandra Lavorel , Nicolas Legay Journal of Applied Ecology, 2018, 55 (1), pp.49 - 58. ⟨10.1111/1365-2664.13010⟩ Journal articles hal-01688474v1
	Adaptation of soil nitrifiers to very low nitrogen level jeopardizes the efficiency of chemical fertilization in west african moist savannas Féline L. Assémien , Thomas Pommier , J. T. Gonnety , Jonathan Gervaix , Xavier Le Roux Scientific Reports, 2017, 7 (1), ⟨10.1038/s41598-017-10185-5⟩ Journal articles hal-02487206v1
	Green alder (Alnus viridis) encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently Guillaume Schwob , M. Roy , S. Manzi , Thomas Pommier , M. P. Fernandez Environmental Microbiology, 2017, 19 (8), pp.3235-3250. ⟨10.1111/1462-2920.13818⟩ Journal articles hal-02487211v1
	Soil C and N statuses determine the effect of maize inoculation by plant growth-promoting rhizobacteria on nitrifying and denitrifying communities Alessandro Florio , Thomas Pommier , Jonathan Gervaix , Annette Berard , Xavier Le Roux Scientific Reports, 2017, 7 (1), ⟨10.1038/s41598-017-08589-4⟩ Journal articles hal-01608082v1
	Influence of plant traits, soil microbial properties, and abiotic parameters on nitrogen turnover of grassland ecosystems Nicolas Legay , Sandra Lavorel , Catherine Baxendale , Ute Krainer , Michael Bahn Ecosphere, 2016, 7 (11), pp.e01448. ⟨10.1002/ecs2.1448⟩ Journal articles hal-01688415v1
	Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach Xavier Le Roux , Nicholas J. Bouskill , Audrey Niboyet , Laure Barthes , Paul Dijkstra Frontiers in Microbiology, 2016, 7, pp.628. ⟨10.3389/fmicb.2016.00628⟩ Journal articles hal-01331118v1
	Responses of Aquatic Bacteria to Terrestrial Runoff: Effects on Community Structure and Key Taxonomic Groups Huong T. Le , Cuong T. Ho , Quan H. Trinh , Duc A. Trinh , Minh T.N. Luu Frontiers in Microbiology, 2016, 7, pp.889. ⟨10.3389/fmicb.2016.00889⟩ Journal articles hal-01344127v1
	Titanium dioxide nanoparticles strongly impact soil microbial function by affecting archaeal nitrifiers Marie Simonin , Agnès Richaume-Jolion , Julien P. Guyonnet , Audrey Dubost , Jean M. F. Martins Scientific Reports, 2016, 6, pp.1-10. ⟨10.1038/srep33643⟩ Journal articles hal-01602239v1
	Management of Microbial Communities through Transient Disturbances Enhances the Functional Resilience of Nitrifying Gas-Biofilters to Future Disturbances Léa Cabrol , Franck Poly , Luc Malhautier , Thomas Pommier , Catherine Lerondelle Environmental Science and Technology, 2016, 50 (1), pp.338-48. ⟨10.1021/acs.est.5b02740⟩ Journal articles hal-01426896v1
	Using plant traits to explain plant–microbe relationships involved in nitrogen acquisition Amélie Cantarel , Thomas Pommier , Marie Desclos-Theveniau , Sylvain Diquelou , Maxime Dumont Ecology, 2015, 96 (3), pp.788-799. ⟨10.1890/13-2107.1⟩ Journal articles hal-02183507v1
	Impact of terrestrial runoff on organic matter, trophic state, and phytoplankton in a tropical, upland reservoir Duc Anh Trinh , Thi Nguyet Minh Luu , Quan Hong Trinh , Hai Sy Tran , Tien Minh Tran Aquatic Sciences - Research Across Boundaries, 2015, 78 (2), pp.1-13. ⟨10.1007/s00027-015-0439-y⟩ Journal articles hal-02487302v1
	Are plant-soil feedback responses explained by plant traits? Catherine Baxendale , Kate H. Orwin , Franck Poly , Thomas Pommier , Richard D. Bardgett New Phytologist, 2014, 204 (2), pp.408-423. ⟨10.1111/nph.12915⟩ Journal articles hal-02487469v1
	Off-site impacts of agricultural composting: role of terrestrially derived organic matter in structuring aquatic microbial communities and their metabolic potential Thomas Pommier , Asmaa Merroune , Yvan Bettarel , Patrice Got , Jean-Louis Janeau FEMS Microbiology Ecology, 2014, 90 (3), pp.622-632. ⟨10.1111/1574-6941.12421⟩ Journal articles hal-02487470v1
	Evidence for biological denitrification inhibition (BDI) by plant secondary metabolites Clément Bardon , Florence Piola , Floriant Bellvert , Feth El Zahar Haichar , Gilles Comte New Phytologist, 2014, 204 (3), pp.620-630. ⟨10.1111/nph.12944⟩ Journal articles hal-01085302v1
	Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA B. G. Crespo , Thomas Pommier , B. Fernández-Gómez , C. Pedrós-Alió MicrobiologyOpen, 2013, 2 (4), pp.541-552. ⟨10.1002/mbo3.92⟩ Journal articles hal-02522216v1
	Phytochemical analysis of mature tree root exudates in situ and their role in shaping soil microbial communities in relation to tree N-acquisition strategy Serge Michalet , Julien Rohr , Denis Warshan , Clément Bardon , Jean-Christophe Rogy Plant Physiology and Biochemistry, 2013, 72, pp.169-177. ⟨10.1016/j.plaphy.2013.05.003⟩ Journal articles hal-01032437v1
	Relative contributions of plant traits and soil microbial properties to mountain grassland ecosystem services Karl Grigulis , Sandra Lavorel , Ute Krainer , Nicolas Legay , Catherine Baxendale Journal of Ecology, 2013, Plant Functional Effects On Ecosystem Services, 101 (1), pp.47-57. ⟨10.1111/1365-2745.12014⟩ Journal articles hal-01687645v1
	Pole-to-pole biogeography of surface and deep marine bacterial communities J.-F. Ghiglione , P. E. Galand , Thomas Pommier , C. Pedrós-Alió , E. W. Maas Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (43), pp.17633-17638. ⟨10.1073/pnas.1208160109⟩ Journal articles hal-02531848v1
	Contrasted Effects of Diversity and Immigration on Ecological Insurance in Marine Bacterioplankton Communities T. Bouvier , P. Venail , Thomas Pommier , C. Bouvier , C. Barbera PLoS ONE, 2012, 7 (6), pp.e37620. ⟨10.1371/journal.pone.0037620⟩ Journal articles hal-02531846v1
	Four years of experimental climate change modifies the microbial drivers of N2O fluxes in an upland grassland ecosystem Amélie A. M. Cantarel , Juliette Bloor , Thomas Pommier , Nadine Guillaumaud , Caroline Moirot Global Change Biology, 2012, 18 (8), pp.2520-2531. ⟨10.1111/j.1365-2486.2012.02692.x⟩ Journal articles halsde-00722571v1
	Phylogenetic constraints on ecosystem functioning Dominique Gravel , Thomas A. Bell , Claire Barbera , Marine Combe , Thomas Pommier Nature Communications, 2012, 3 (1), ⟨10.1038/ncomms2123⟩ Journal articles hal-01892932v1
	Environment drives high phylogenetic turnover among oceanic bacterial communities Thomas Pommier , Emmanuel J.P. Douzery , David Mouillot Biology Letters, 2012, 8 (4), pp.562-566. ⟨10.1098/rsbl.2011.0990⟩ Journal articles halsde-00723071v1
	Two decades of describing the unseen majority of aquatic microbial diversity Lucie Zinger , Angélique Gobet , Thomas Pommier Molecular Ecology, 2012, 21 (8), pp.1878-1896. ⟨10.1111/j.1365-294X.2011.05362.x⟩ Journal articles halsde-00724641v1
	Experimental niche evolution alters the strength of the diversity-productivity relationship D. Gravel , T. Bell , C. Barbera , T. Bouvier , Thomas Pommier Nature, 2010, 469 (7328), pp.89-92. ⟨10.1038/nature09592⟩ Journal articles hal-02548056v1
	Spatial patterns of bacterial richness and evenness in the NW Mediterranean Sea explored by pyrosequencing of the 16S rRNA Thomas Pommier , Pr. Neal , J. Gasol , M. Coll , S. Acinas Aquatic Microbial Ecology, 2010, 61 (3), pp.221-233. ⟨10.3354/ame01484⟩ Journal articles hal-02548057v1

	Caractérisation de l’environnement d’E. coli dans les eaux de surface et risques sanitaires en Afrique de l’Ouest Elodie Robert , Moussa Boubacar Moussa , Marc-Antoine Mant , Nikiema Dayangnéwendé Edwige , Yasmina Karambiri Atelier Theia Santé, Jun 2024, Montpellier, France Conference papers hal-04662470v1
	Characterization of the E. coli environment in surface waters and health risks in West Africa Elodie Robert , Marc-Antoine Mant , Nikiema Dayangnéwendé Edwige , Moussa Boubacar Moussa , Manuela Grippa Monitoring small lakes and reservoirs in drylands from space, Apr 2024, Toulouse, France Conference papers hal-04584818v1
	Contribution of remote sensing to the monitoring of infectious diseases and focus on environmental monitoring of E. coli in West Africa Elodie Robert , Marc-Antoine Mant , Nikiema Dayangnéwendé Edwige , Moussa Boubacar Moussa , Manuela Grippa Infectious diseases and climate change, May 2024, Paris, France Conference papers hal-04584826v1
	Contribution of remote sensing to the monitoring of infectious diseases and focus on environmental monitoring of E. coli in West Africa Elodie Robert , Marc-Antoine Mant , Edwige Dayangnéwendé Nikiema , Moussa Boubacar Moussa , Manuela Grippa Infectious Diseases and Climate Change, May 2024, Paris, France Conference papers hal-04654759v1
	N-related functional groups are key indicators of constructed technosols maturation and drought resistance improvement in urban ecosystems Thomas Pommier Nitrogen-induced Susceptibility Workshop, Nanjing Agricultural University, Apr 2023, Nanjing, China Conference papers hal-04206291v1
	Improving fertile soil management in cities : a microbial perspective Thomas Pommier iEES Paris_ Seminar Series, iEES Paris, Sep 2023, Paris, France Conference papers hal-04206264v1
	Nature Based Solutions to manage N-related functional groups of urban soils Thomas Pommier International LorMe seminars for advanced great science, Huazhong Agricultural University, Mar 2023, Wuhan, China Conference papers hal-04206274v1
	Microbial metacommunity: a METABAR coding approach Marc Buée , Matthieu Barret , Maria Bernard , Didier Debroas , Isabelle Domaizon 2017 Scientific MEM days: Journées scientifiques MEM (Métaomiques et écosystèmes microbiens), Jan 2017, Paris, France Conference papers hal-01607836v1
	Réponses des fonctions microbiennes de dégradation des matières organiques des sols à un gradient d’anthropisation d’agrosystèmes Gwenaëlle Lashermes , Gonzague Alavoine , Juliette Bloor , Pascal Carrère , Xavier Charrier TEBIS (Traits Ecologiques et Biologiques des organIsmes des Sols) VI, Oct 2017, Metz, France Conference papers hal-02785780v1
	Exposures of soil microbial communities to realistic antibiotics concentrations: key parameters for environmental risk assessment Olivier Crouzet , Anais Goulas , Claire-Sophie Haudin , Pierre Benoit , Alain Hartmann 1ère conférence internationale d’Ecotoxicologie Microbienne, EcotoxicoMic, Nov 2017, Lyon, France Conference papers hal-01604497v1
	Can we manage plant-microbe interactions belowground to increase sustainable crop productions? The case of Maize seed inoculation with Azospirillum lipoferum CRT1 and its effects on N-cycling rhizospheric microbial communities Alessandro Florio , Thomas Pommier , Jonathan Gervaix , Laurent Legendre , Xavier Le Roux EcoSummit 2016. Ecological Sustainability: Engineering Change, Aug 2016, Marseille, France Conference papers hal-01834756v1
	Ecotoxicological impact of an antibiotic mixture on soil nitrogen cycling microbial guilds Olivier Crouzet , Anais Goulas , Agnès Richaume-Jolion , Thomas Pommier , Christelle Marrauld First International Conference on Risk Assessment of Pharmaceuticals in the Environment (ICRAPHE), Sep 2016, Paris, France Conference papers hal-01605584v1
	Ecotoxicological impact of sulfamethoxazole on nitrogen cycling microbial communities, in agricultural amended soil Olivier Crouzet , Anais Goulas , Agnès Richaume-Jolion , Thomas Pommier , Christelle Marrauld 1st International Conference on the Risk Assessment of PHarmaceuticals in the Environment, Sep 2016, Paris, France Conference papers hal-01595690v1
	Can we manage plant-microbes interactions belowground to increase the sustainability of cropping systems ? The case of maize seed inoculation with the beneficial Azospirillum lipoferum CRT1 and its effects on the N-cycling rhizospheric microbial communities Allessandro Florio , Thomas Pommier , Jonathan Gervaix , Xavier Le Roux EcoSummit 2016 Ecological Sustainability, Aug 2016, Montpellier, France Conference papers hal-02545157v1
	Increasing species richness and genetic diversity in agriculture: results of the Wheatamix project Jerome Enjalbert , Vincent Allard , Bruno Andrieu , Sébastien Barot , Julie Borg 5. International EcoSummit Congress - Ecological Sustainability: Engineering Change, Aug 2016, Montpellier, France. 40 p Conference papers hal-01799552v1
	WHEATAMIX Project : Increasing within-field wheat diversity to foster ecosystem services in the Parisian basin Vincent Allard , Bruno Andrieu , Sébastien Barot , Julie Borg , Amélie Cantarel 3. International Conference on Biodiversity and the UN Millennium Development Goals,Biodiversity and Food Security – From Trade-offs to Synergies, Oct 2014, Aix en Provence, France Conference papers hal-01620718v1
	WHEATAMIX Project : Increasing within-field wheat diversity to foster ecosystem services in the Parisian basin Vincent Allard , Bruno Andrieu , Sébastien Barot , Julie Borg , Amélie Cantarel Solibam final congress - Diversity strategies for organic and low input agricultures and their food systems, Jul 2014, Nantes, France Conference papers hal-01620719v1
	Predicting soil bacterial responses to multi-factor global change with trait-based modelling Xavier Le Roux , Nicholas Bouskill , Audrey Niboyet , Bruce A. Hungate , Thomas Pommier First Global Soil Biodiversity Conference, Dec 2014, Dijon, France Conference papers hal-01655401v1
	How plant functional traits cascade to microbial function and ecosystem services in mountain grasslands Sandra Lavorel , Karl Grigulis , Ute Krainer , Nicolas Legay , M. Dumont EGU General Assembly 2012, Apr 2012, Vienne, Austria. pp.6359-1 Conference papers hal-02545086v1
	Climate change drivers modify N2O fluxes via changes in microbial populations in a grassland experiment Amélie Cantarel , Juliette Bloor , Thomas Pommier , Nadine Guillaumaud , Jean-François J.-F. Soussana BES Annual Meeting, Sep 2011, Sheffield, United Kingdom Conference papers hal-02804220v1

	Multiplicité des symbioses : du parasitisme au mutualisme Wafa Achouak , Philippe Bertin , Pierre Capy , Didier Debroas , Franck Dedeine L’empreinte du Vivant, Le Cherche Midi, pp.191, 2015, 978-2-7491-4383-5 Book sections hal-02389481v1

	N-microbial properties are key indicators of fertility in maturating soils built for urban greening. Marine Durand , Nicolas Legay , Nolwenn Le Guyader , Jonathan Gervaix , Sonia Czarnes ESA - CSEE Annual meeting: A change is gonna come, Aug 2022, Montréal Québec, Canada Conference poster hal-04206338v1
	Responses of microbial degradation patterns of soil organic matter to a gradient of anthropogenic pressure on agrosystems Gwenaëlle Lashermes , Gonzague Alavoine , Juliette Bloor , Pascal Carrère , Xavier Charrier Ecology of Soil Microorganisms Conference, Jun 2018, Helsinki, Finland. 2018 Conference poster hal-02785794v1
	Carbon and nitrogen limitation explains the contrasting responses of rhizospheric N-cycling microbial communities to maize inoculation by Azospirillum lipoferum CRT1 Alessandro Florio , Thomas Pommier , Jonathan Gervaix , Caroline Bréfort , Annette Berard EGU 2017, European Geophysical Union General Assembly 2017, Apr 2017, Vienne, Austria. 19, 2017, 19th EGU General Assembly, EGU2017 : proceedings from the conference held 23-28 April, 2017 in Vienna, Austria Conference poster hal-01834755v1
	Plant-microbes interactions in the rhizosphere of maize inoculated with Azospirillum lipoferum CRT1: implications for soil N-cycling microorganisms Alessandro Florio , Thomas Pommier , Jonathan Gervaix , Laurent Legendre , Xavier Le Roux Sfécologie-2016, International Conference of Ecological Sciences, Oct 2016, Marseille, France. 2016 Conference poster hal-01834753v1
	Four years of experimental climate change modifies the community structure of denitrifiers and the related microbial drivers of N2O fluxes in an upland grassland ecosystem. Thomas Pommier , Amélie Cantarel , Juliette Bloor , Franck Poly 2. Thünen Symposium on Soil Metagenomics, Dec 2013, Braunschweig, Germany. 2013 Conference poster hal-02802239v1

	Larval density in the invasive Drosophila suzukii : immediate and delayed effects on life-history traits Alicia Reyes-Ramírez , Zaïnab Belgaidi , Patricia Gibert , Thomas Pommier , Aurélie Siberchicot 2022 Preprints, Working Papers, ... hal-03822912v1

	Relations Diversité -Fonctionnement -Services Écosystémiques chez les micro-organismes de l'environnement Thomas Pommier Sciences de l'environnement. Université Lyon I, 2019 Habilitation à diriger des recherches tel-02946859v1

Thomas POMMIER

Publications

Diverse organic carbon activates soil microbiome functioning via niche modulation

Microbiome analysis in Lascaux Cave in relation to black stain alterations of rock surfaces and collembola

Larval density in the invasive Drosophila suzukii : Immediate and delayed effects on life‐history traits

Early spring snowmelt and summer droughts strongly impair the resilience of bacterial community and N cycling functions in a subalpine grassland ecosystem

Overland flow during a storm event strongly affects stream water chemistry and bacterial community structure

Resource availability drives bacteria community resistance to pathogen invasion via altering bacterial pairwise interactions

Escherichia coli concentration, multiscale monitoring over the decade 2011-2021 in the Mekong River basin, Lao PDR

Microbiome Analysis of New, Insidious Cave Wall Alterations in the Apse of Lascaux Cave

Microbial ecology of tourist Paleolithic caves

Indirect reduction of Ralstonia solanacearum via pathogen helper inhibition

Quantifying the effect of overland flow on Escherichia coli pulses during floods: use of a tracer-based approach in an erosion-prone tropical catchment

Plant functional trait variability and trait syndromes among wheat varieties: the footprint of artificial selection

Rhizosphere immunity: targeting the underground for sustainable plant health management

Land use strongly influences soil organic carbon and bacterial community export in runoff in tropical uplands

Siderophore-Mediated Interactions Determine the Disease Suppressiveness of Microbial Consortia

Mangrove facies drives resistance and resilience of sediment microbes exposed to anthropic disturbance

Different groups of nitrite-reducers and N2O-reducers have distinct ecological niches and functional roles in West African cultivated soils

Anthropization level of Lascaux Cave microbiome shown by regional‐scale comparisons of pristine and anthropized caves

Facilitation promotes invasions in plant-associated microbial communities

Soil legacy effects of climatic stress, management and plant functional composition on microbial communities influence the response of Lolium perenne to a new drought event

Vicinal land use change strongly drives stream bacterial community in a tropical montane catchment

Rock substrate rather than black stain alterations drives microbial community structure in the passage of Lascaux Cave

The added value of including key microbial traits to determine nitrogen-related ecosystem services in managed grasslands

Adaptation of soil nitrifiers to very low nitrogen level jeopardizes the efficiency of chemical fertilization in west african moist savannas

Green alder (Alnus viridis) encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently

Soil C and N statuses determine the effect of maize inoculation by plant growth-promoting rhizobacteria on nitrifying and denitrifying communities

Influence of plant traits, soil microbial properties, and abiotic parameters on nitrogen turnover of grassland ecosystems

Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach

Responses of Aquatic Bacteria to Terrestrial Runoff: Effects on Community Structure and Key Taxonomic Groups

Titanium dioxide nanoparticles strongly impact soil microbial function by affecting archaeal nitrifiers

Management of Microbial Communities through Transient Disturbances Enhances the Functional Resilience of Nitrifying Gas-Biofilters to Future Disturbances

Using plant traits to explain plant–microbe relationships involved in nitrogen acquisition

Impact of terrestrial runoff on organic matter, trophic state, and phytoplankton in a tropical, upland reservoir

Are plant-soil feedback responses explained by plant traits?

Off-site impacts of agricultural composting: role of terrestrially derived organic matter in structuring aquatic microbial communities and their metabolic potential

Evidence for biological denitrification inhibition (BDI) by plant secondary metabolites

Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA

Phytochemical analysis of mature tree root exudates in situ and their role in shaping soil microbial communities in relation to tree N-acquisition strategy

Relative contributions of plant traits and soil microbial properties to mountain grassland ecosystem services

Pole-to-pole biogeography of surface and deep marine bacterial communities

Contrasted Effects of Diversity and Immigration on Ecological Insurance in Marine Bacterioplankton Communities

Four years of experimental climate change modifies the microbial drivers of N2O fluxes in an upland grassland ecosystem

Phylogenetic constraints on ecosystem functioning

Environment drives high phylogenetic turnover among oceanic bacterial communities

Two decades of describing the unseen majority of aquatic microbial diversity

Experimental niche evolution alters the strength of the diversity-productivity relationship

Spatial patterns of bacterial richness and evenness in the NW Mediterranean Sea explored by pyrosequencing of the 16S rRNA

Caractérisation de l’environnement d’E. coli dans les eaux de surface et risques sanitaires en Afrique de l’Ouest

Characterization of the E. coli environment in surface waters and health risks in West Africa

Contribution of remote sensing to the monitoring of infectious diseases and focus on environmental monitoring of E. coli in West Africa

Contribution of remote sensing to the monitoring of infectious diseases and focus on environmental monitoring of E. coli in West Africa

N-related functional groups are key indicators of constructed technosols maturation and drought resistance improvement in urban ecosystems

Improving fertile soil management in cities : a microbial perspective

Nature Based Solutions to manage N-related functional groups of urban soils

Microbial metacommunity: a METABAR coding approach

Réponses des fonctions microbiennes de dégradation des matières organiques des sols à un gradient d’anthropisation d’agrosystèmes

Exposures of soil microbial communities to realistic antibiotics concentrations: key parameters for environmental risk assessment

Can we manage plant-microbe interactions belowground to increase sustainable crop productions? The case of Maize seed inoculation with Azospirillum lipoferum CRT1 and its effects on N-cycling rhizospheric microbial communities

Ecotoxicological impact of an antibiotic mixture on soil nitrogen cycling microbial guilds

Ecotoxicological impact of sulfamethoxazole on nitrogen cycling microbial communities, in agricultural amended soil

Can we manage plant-microbes interactions belowground to increase the sustainability of cropping systems ? The case of maize seed inoculation with the beneficial Azospirillum lipoferum CRT1 and its effects on the N-cycling rhizospheric microbial communities

Increasing species richness and genetic diversity in agriculture: results of the Wheatamix project

WHEATAMIX Project : Increasing within-field wheat diversity to foster ecosystem services in the Parisian basin

WHEATAMIX Project : Increasing within-field wheat diversity to foster ecosystem services in the Parisian basin

Predicting soil bacterial responses to multi-factor global change with trait-based modelling

How plant functional traits cascade to microbial function and ecosystem services in mountain grasslands

Climate change drivers modify N2O fluxes via changes in microbial populations in a grassland experiment

Multiplicité des symbioses : du parasitisme au mutualisme

N-microbial properties are key indicators of fertility in maturating soils built for urban greening.

Responses of microbial degradation patterns of soil organic matter to a gradient of anthropogenic pressure on agrosystems

Carbon and nitrogen limitation explains the contrasting responses of rhizospheric N-cycling microbial communities to maize inoculation by Azospirillum lipoferum CRT1

Plant-microbes interactions in the rhizosphere of maize inoculated with Azospirillum lipoferum CRT1: implications for soil N-cycling microorganisms

Four years of experimental climate change modifies the community structure of denitrifiers and the related microbial drivers of N2O fluxes in an upland grassland ecosystem.

Larval density in the invasive Drosophila suzukii : immediate and delayed effects on life-history traits

Relations Diversité -Fonctionnement -Services Écosystémiques chez les micro-organismes de l'environnement