Timothy M. Vogel

110
Documents

Publications

Publications

Microbial defluorination of TFA, PFOA, and HFPO-DA by a native microbial consortium under anoxic conditions

Zhiwen Tang , Timothy M. Vogel , Qing Wang , Changlong Wei , Mukhtiar Ali et al.
Journal of Hazardous Materials, 2024, 465, pp.133217. ⟨10.1016/j.jhazmat.2023.133217⟩
Article dans une revue (data paper) hal-04875110 v1

Bacterial bioaugmentation of woodchip bioreactors to increase nitrate removal in cold agricultural drainage water

Arnaud Jéglot , Concepcion Sanchez-Cid , Sebastian Reinhold Sørensen , Kirk Matthew Schnorr , Finn Plauborg et al.
Environmental Technology, 2024, pp.1-12. ⟨10.1080/09593330.2024.2432483⟩
Article dans une revue (data paper) hal-04875092 v1

Influence of shear stress on electroactive biofilm characteristics and performance in microbial fuel cells

Alexiane Godain , Timothy M. Vogel , Pascal Fongarland , Naoufel Haddour
Biosensors and Bioelectronics, 2024, 244, pp.115806. ⟨10.1016/j.bios.2023.115806⟩
Article dans une revue hal-04276417 v1
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Microbial life in preferential flow paths in subsurface clayey till revealed by metataxonomy and metagenomics

Frederik Bak , Christoph Keuschnig , Ole Nybroe , Jens Aamand , Peter Jørgensen et al.
BMC Microbiology, 2024, 24 (1), pp.296. ⟨10.1186/s12866-024-03432-z⟩
Article dans une revue hal-04766636 v1
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Selection processes of Arctic seasonal glacier snowpack bacterial communities

Christoph Keuschnig , Timothy M. Vogel , Elena Barbaro , Andrea Spolaor , Krystyna Koziol et al.
Microbiome, 2023, 11 (1), pp.35. ⟨10.1186/s40168-023-01473-6⟩
Article dans une revue hal-04284625 v1
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Metaproteomic and Metagenomic-Coupled Approach to Investigate Microbial Response to Electrochemical Conditions in Microbial Fuel Cells

Alexiane Godain , Timothy M. Vogel , Jean-Michel Monier , Agathe Paitier , Naoufel Haddour
Microorganisms, 2023, 11 (11), pp.2695. ⟨10.3390/microorganisms11112695⟩
Article dans une revue hal-04269334 v1

Toward a Universal Unit for Quantification of Antibiotic Resistance Genes in Environmental Samples

Xiaole Yin , Xi Chen , Xiao-Tao Jiang , Ying Yang , Bing Li et al.
Environmental Science and Technology, 2023, 57 (26), pp.9713-9721. ⟨10.1021/acs.est.3c00159⟩
Article dans une revue hal-04315013 v1
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Sub-inhibitory gentamicin pollution induces gentamicin resistance gene integration in class 1 integrons in the environment

Concepcion Sanchez-Cid , Timothy Ghaly , Michael Gillings , Timothy M. Vogel
Scientific Reports, 2023, 13 (1), pp.8612. ⟨10.1038/s41598-023-35074-y⟩
Article dans une revue hal-04315018 v1

Impact of in situ solar irradiation on snow bacterial communities and functional potential

Concepcion Sanchez-Cid , Christoph Keuschnig , Catherine Larose , Timothy M. Vogel
FEMS Microbiology Ecology, 2023, 99 (6), pp.fiad042. ⟨10.1093/femsec/fiad042⟩
Article dans une revue hal-04316133 v1

Evolution and interaction of microbial communities in mangrove microbial fuel cells and first description of Shewanella fodinae as electroactive bacterium

Fatima Radouani , Concepcion Sanchez-Cid , Adèle Silbande , Adeline Laure , Azariel Ruiz-Valencia et al.
Bioelectrochemistry, 2023, 153, pp.108460. ⟨10.1016/j.bioelechem.2023.108460⟩
Article dans une revue hal-04314995 v1
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Influence of Hydrodynamic Forces on Electroactive Bacterial Adhesion in Microbial Fuel Cell Anodes

Alexiane Godain , Timothy M Vogel , Pascal Fongarland , Naoufel Haddour
Bioengineering, 2023, 10 (12), pp.1380. ⟨10.3390/bioengineering10121380⟩
Article dans une revue hal-04320193 v1
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Environmental and Anthropogenic Factors Shape the Snow Microbiome and Antibiotic Resistome

Concepcion Sanchez-Cid , Christoph Keuschnig , Karol Torzewski , Łukasz Stachnik , Daniel Kępski et al.
Frontiers in Microbiology, 2022, 13, ⟨10.3389/fmicb.2022.918622⟩
Article dans une revue hal-03827526 v1
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Bacterial Competition for the Anode Colonization under Different External Resistances in Microbial Fuel Cells

Alexiane Godain , Naoufel Haddour , Pascal Fongarland , Timothy M Vogel
Catalysts, In press, ⟨10.3390/catal12020176⟩
Article dans une revue hal-03547936 v1
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Effect of Contact Area and Shape of Anode Current Collectors on Bacterial Community Structure in Microbial Fuel Cells

Agathe Paitier , Naoufel Haddour , Chantal Gondran , Timothy Vogel
Molecules, 2022, 27 (7), pp.2245. ⟨10.3390/molecules27072245⟩
Article dans une revue hal-03624547 v1
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Sequencing Depth Has a Stronger Effect than DNA Extraction on Soil Bacterial Richness Discovery

Concepcion Sanchez-Cid , Romie Tignat-Perrier , Franqueville Laure , Laurence Delaurière , Trista Schagat et al.
Biomolecules, 2022, ⟨10.3390/biom12030364⟩
Article dans une revue hal-03662087 v1
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MICROORGANISMS FLOATING THROUGH THE AIR

Romie Tignat-Perrier , N. Técher , Timothy M. Vogel , Catherine Larose , Aurélien Dommergue
Frontiers for Young Minds, 2022, 10, pp.629355. ⟨10.3389/frym.2022.629355⟩
Article dans une revue hal-04349896 v1
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Gentamicin Adsorption onto Soil Particles Prevents Overall Short-Term Effects on the Soil Microbiome and Resistome

Concepcion Sanchez-Cid , Alexandre Guironnet , Laure Wiest , Emmanuelle Vulliet , Timothy M. Vogel
Antibiotics, 2021, Special Issue The Distribution of Antibiotic Resistance in Terrestrial Ecosystems, 10 (2), pp.191. ⟨10.3390/antibiotics10020191⟩
Article dans une revue hal-03200197 v1
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Aminoglycosides analysis optimization using Ion pairing Liquid Chromatography coupled to tandem Mass Spectrometry and application on wastewater samples

Alexandre Guironnet , Concepcion Sanchez-Cid , Timothy M. Vogel , Laure Wiest , Emmanuelle Vulliet
Journal of Chromatography A, 2021, pp.462133. ⟨10.1016/j.chroma.2021.462133⟩
Article dans une revue hal-03200052 v1
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Stainless steel coated with carbon nanofiber/PDMS composite as anodes in microbial fuel cells

Meriem Saadi , Julien Pézard , Naoufel Haddour , Mohsen Erouel , Timothy M. Vogel et al.
Materials Research Express, 2020, ⟨10.1088/2053-1591/ab6c99⟩
Article dans une revue hal-03327537 v1

Variation over time of excavated soil properties treated with surfactants

Irini Djeran-Maigre , Philippe Dubujet , Timothy M. Vogel
Environmental Earth Sciences, 2018, 77 (67), 12 p. ⟨10.1007/s12665-018-7230-z⟩
Article dans une revue hal-01702264 v1

Microbial fuel cell anodic microbial population dynamics during MFC start-up

Agathe Paitier , Alexiane Godain , Delina Lyon , Naoufel Haddour , Timothy M. Vogel et al.
Biosensors and Bioelectronics, 2017, 92, pp.357 - 363. ⟨10.1016/j.bios.2016.10.096⟩
Article dans une revue hal-01588970 v1

Combined iron and sulfate reduction biostimulation as a novel approach to enhance BTEX and PAH source-zone biodegradation in biodiesel blend-contaminated groundwater

Juliana B. Müller , Débora T. Ramos , Catherine Larose , Marilda Fernandes , Helen S.C. Lazzarin et al.
Journal of Hazardous Materials, 2017, 326, pp.229 - 236. ⟨10.1016/j.jhazmat.2016.12.005⟩
Article dans une revue hal-01588965 v1

A Modified Approach for in Situ Chemical Oxidation Coupled to Biodegradation Enhances Light Nonaqueous Phase Liquid Source-Zone Remediation

Franciele Fedrizzi , Débora T. Ramos , Helen S. C. Lazzarin , Catherine Larose , Timothy M. Vogel et al.
Environmental Science and Technology, 2017, 51 (1), pp.463 - 472. ⟨10.1021/acs.est.6b03604⟩
Article dans une revue hal-01588980 v1

Hydrocarbon biostimulation and bioaugmentation in organic carbon and clay-rich soils

Thibaut Masy , Sandrine Demanèche , Olivier Tromme , Philippe Thonart , Philippe Jacques et al.
Soil Biology and Biochemistry, 2016, 99, pp.66 - 74. ⟨10.1016/j.soilbio.2016.04.016⟩
Article dans une revue hal-01589025 v1

Biodiesel presence in the source zone hinders aromatic hydrocarbons attenuation in a B20-contaminated groundwater

Débora Toledo Ramos , Helen Simone Chiaranda Lazzarin , Pedro J.J. Alvarez , Timothy M. Vogel , Marilda Fernandes et al.
Journal of Contaminant Hydrology, 2016, 193, pp.48 - 53. ⟨10.1016/j.jconhyd.2016.09.002⟩
Article dans une revue hal-01588990 v1

Linking environmental prokaryotic viruses and their host through CRISPRs

Laura Sanguino Casado , Laure Franqueville , Timothy M. Vogel , Catherine Larose
FEMS Microbiology Ecology, 2015, 91 (5), ⟨10.1093/femsec/fiv046⟩
Article dans une revue hal-01589168 v1

Functional Basis of Microorganism Classification

Chengsheng Zhu , Tom O. Delmont , Timothy M. Vogel , Yana Bromberg
PLoS Computational Biology, 2015, 11 (8), ⟨10.1371/journal.pcbi.1004472⟩
Article dans une revue hal-01589154 v1

Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics

Tom O. Delmont , A. Murat Eren , Lorrie Maccario , Emmanuel Prestat , Özcan C. Esen et al.
Frontiers in Microbiology, 2015, 6, ⟨10.3389/fmicb.2015.00358⟩
Article dans une revue hal-01589179 v1

Characterization of new bacterial catabolic genes and mobile genetic elements by high throughput genetic screening of a soil metagenomic library

Samuel Jacquiod , Sandrine Demanèche , Laure Franqueville , Luka Ausec , Zhuofei Xu et al.
Journal of Biotechnology, 2014, epub ahead of print. ⟨10.1016/j.jbiotec.2014.03.036⟩
Article dans une revue hal-00989480 v1

Microbial ecology of chlorinated solvent biodegradation

Maude M. David , Sébastien Cecillon , Brett M. Warne , Emmanuel Prestat , Janet K. Jansson et al.
Environmental Microbiology, 2014, 17 (12), pp.4835 - 4850. ⟨10.1111/1462-2920.12413⟩
Article dans une revue istex hal-01589127 v1

Potential drivers of microbial community structure and function in Arctic spring snow

Lorrie Maccario , Timothy M. Vogel , Catherine Larose
Frontiers in Microbiology, 2014, 5, ⟨10.3389/fmicb.2014.00413⟩
Article dans une revue hal-01589188 v1

Ethyl tert-butyl ether (ETBE)-degrading microbial communities in enrichments from polluted environments

Yoann Le Digabel , Sandrine Demanèche , Yves Benoit , Françoise Fayolle-Guichard , Timothy M. Vogel
Journal of Hazardous Materials, 2014, 279, pp.502-510. ⟨10.1016/j.jhazmat.2014.07.013⟩
Article dans une revue hal-01075205 v1

Ethyl tert-butyl ether (ETBE) biodegradation by a syntrophic association of Rhodococcus sp. IFP 2042 and Bradyrhizobium sp. IFP 2049 isolated from a polluted aquifer

Yoann Le Digabel , Sandrine Demanèche , Yves Benoit , Timothy M. Vogel , Françoise Fayolle-Guichard
Applied Microbiology and Biotechnology, 2013, 97 (24), pp.10531-10539. ⟨10.1007/s00253-013-4803-3⟩
Article dans une revue istex hal-01075203 v1

Metagenomic exploration of antibiotic resistance in soil

Jean-Michel Monier , Sandrine Demanèche , Tom Delmont , Alban Mathieu , Timothy M Vogel et al.
Current Opinion in Microbiology, 2011, 14 (3), pp.229-235. ⟨10.1016/j.mib.2011.04.010⟩
Article dans une revue istex hal-00629407 v1

Metagenomic comparison of direct and indirect soil DNA extraction approaches

Tom Delmont , Patrick Robe , Ian M. Clark , Pascal Simonet , Timothy M Vogel
Journal of Microbiological Methods, 2011, 86 (3), pp.397-400. ⟨10.1016/j.mimet.2011.06.013⟩
Article dans une revue istex hal-00629399 v1

Accessing the Soil Metagenome for Studies of Microbial Diversity

Tom Delmont , Patrick Robe , Sébastien Cecillon , Ian M. Clark , Florentin Constancias et al.
Applied and Environmental Microbiology, 2011, 77 (4), pp.1315-1324. ⟨10.1128/AEM.01526-10⟩
Article dans une revue hal-00579312 v1

Characterization of Denitrification Gene Clusters of Soil Bacteria via a Metagenomic Approach

Sandrine Demanèche , Laurent Philippot , Maude M. David , Elisabeth Navarro , Timothy M Vogel et al.
Applied and Environmental Microbiology, 2009, 75 (2), pp.534-537. ⟨10.1128/aem.01706-08⟩
Article dans une revue hal-00368298 v1

TerraGenome: a consortium for the sequencing of a soil metagenome

Timothy M Vogel , Pascal Simonet , Janet K. Jansson , Penny R. Hirsch , James M. Tiedje et al.
Nature Reviews Microbiology, 2009, 7 (4), pp.252. ⟨10.1038/nrmicro2119⟩
Article dans une revue hal-00391653 v1

Evaluation of functional gene enrichment in a soil metagenomic clone library

Sandrine Demanèche , Maude M. David , Elisabeth Navarro , Pascal Simonet , Timothy M Vogel
Journal of Microbiological Methods, 2009, 76 (1), pp.105-107. ⟨10.1016/j.mimet.2008.09.009⟩
Article dans une revue istex hal-00368291 v1

Extracellular plant DNA in Geneva groundwater and traditional artesian drinking water fountains

John Poté , Patrick Mavingui , Elisabeth Navarro , Walter Rosselli , Walter Wildi et al.
Chemosphere, 2009, 75 (4), pp.498-504. ⟨10.1016/j.chemosphere.2008.12.048⟩
Article dans une revue istex hal-00368906 v1

Advantages of the metagenomic approach for soil exploration: reply from Vogel et al.

Timothy M Vogel , Penny R. Hirsch , Pascal Simonet , Janet K. Jansson , James M. Tiedje et al.
Nature Reviews Microbiology, 2009, 7 (10), pp.756 - 757. ⟨10.1038/nrmicro2119-c3⟩
Article dans une revue hal-00418305 v1

Visual Evidence of Horizontal Gene Transfer between Plants and Bacteria in the Phytosphere of Transplastomic Tobacco

Alessandra Pontiroli , Aurora Rizzi , Pascal Simonet , Daniele Daffonchio , Timothy M. Vogel et al.
Applied and Environmental Microbiology, 2009, 75 (10), pp.3314-3322. ⟨10.1128/AEM.02632-08⟩
Article dans une revue hal-00391652 v1
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Antibiotic-resistant soil bacteria in transgenic plant fields

Sandrine Demanèche , Hervé Sanguin , John Poté , Elisabeth Navarro , Dominique Bernillon et al.
Proceedings of the National Academy of Sciences of the United States of America, 2008, 105 (10), pp.3957-3962. ⟨10.1073/pnas.0800072105⟩
Article dans une revue halsde-00259468 v1

The metagenomics of disease-suppressive soils experiences from the METACONTROL project

Jan Dirk van Elsas , Rodrigo Costa , Janet K. Jansson , Sara Sjöling , Mark J. Bailey et al.
Trends in Biotechnology, 2008, 26 (11), pp.591-601. ⟨10.1016/j.tibtech.2008.07.004⟩
Article dans une revue istex hal-00368910 v1

A novel and rapid method for synthesizing positive controls and standards for quantitative PCR

Maude M. David , Amy R. Sapkota , Pascal Simonet , Timothy M Vogel
Journal of Microbiological Methods, 2008, 73 (1), pp.73-77. ⟨10.1016/j.mimet.2008.01.001⟩
Article dans une revue istex hal-00313788 v1

Potential of a 16S rRNA-Based Taxonomic Microarray for Analyzing the Rhizosphere Effects of Maize on Agrobacterium spp. and Bacterial Communities

Hervé Sanguin , Benoit Remenant , Arnaud Dechesne , Jean Thioulouse , Timothy M. Vogel et al.
Applied and Environmental Microbiology, 2006, 72 (6), pp.4302-4312. ⟨10.1128/AEM.02686-05⟩
Article dans une revue hal-02659520 v1

Type I Polyketide Synthases May Have Evolved Through Horizontal Gene Transfer

Aurélien Ginolhac , Cyrille Jarrin , Patrick Robe , Guy Perrière , Timothy M. Vogel et al.
Journal of Molecular Evolution, 2005, 60, pp.716-725. ⟨10.1007/s00239-004-0161-1⟩
Article dans une revue istex halsde-00354210 v1

Extraction of DNA from soil

Timothy M. Vogel , Renaud Nalin , Pascal Simonet
European Journal of Soil Biology, 2003, 39 (4), pp.183-190. ⟨10.1016/S1164-5563(03)00033-5⟩
Article dans une revue istex hal-03200272 v1

BIODEGRADATION OF MONOAROMATIC HYDROCARBONS IN AQUIFER COLUMNS AMENDED WITH HYDROGEN PEROXIDE AND NITRATE

Timothy M. Vogel , Pedro J.J. Alvarez , Paul Anid
Water Research, 1993, 27 (4), pp.685-691. ⟨10.1016/0043-1354(93)90178-K⟩
Article dans une revue hal-03200261 v1

Determining possible origin, structure and function of microbial communities

Timothy M. Vogel
Polar & Alpine Microbiology 2019, Feb 2019, Hamilton, New Zealand
Communication dans un congrès hal-02122119 v1

Environmental resistome transcriptional response to gentamicin pollution at sub-inhibitory concentrations

Concepcion Sanchez-Cid , Alexandre Guironnet , Franqueville Laure , Laure Wiest , Emmanuelle Vulliet et al.
8th Symposium on Antimicrobial Resistance in Animals and the Environment, Jul 2019, Tours, France
Communication dans un congrès hal-02458392 v1

Geographical distribution of bacterial communities in the atmosphere and controlling factors

Romie Tignat-Perrier , Alban Thollot , Olivier E Magand , Aurélien E Dommergue , Timothy M Vogel et al.
11th International Congress on Aerobiology, Sep 2018, Parma, Italy
Communication dans un congrès hal-01977530 v1

The colonisation and selection processes involved in shaping frost flower communities

Rose Layton , James France , Timothy M Vogel , Catherine Larose
Polar, Jun 2018, Davos, Switzerland
Communication dans un congrès hal-01977524 v1

Bacterial and fungal diversity along a vertical air column at Mount Sonnblick, Austria

Nora Els , Kathrin Baumann-Stanzer , Catherine Larose , Timothy M Vogel , Birgit Sattler
11th International Congress on Aerobiology, Sep 2018, Parma, Italy
Communication dans un congrès hal-01977542 v1

Electrochemical analysis of permselective properties of anodic biofilms in microbial fuel cells

Naoufel Haddour , Alexiane Godain , Agathe Paitier , Timothy M. Vogel
EU-ISMET 2016, Sep 2016, Rome, Italy
Communication dans un congrès hal-01946350 v1

Microbial community structure and function vertical distribution in snowpack over sea ice from Greenlandic fjord

Lorrie Maccario , Shelly Carpenter , Jody W. Deming , Timothy M Vogel , Catherine Larose
Gordon Research Conference, Mar 2015, Barga, Italy
Communication dans un congrès hal-01974570 v1

Electrochemistry and microbial ecology approach of anodic biofilms for the study of scaled-up microbial fuel cells

Agathe Paitier , Naoufel Haddour , Timothy M Vogel
Goldschmidt Conference, Aug 2015, Prague, Czech Republic. pp.2380
Communication dans un congrès hal-01626853 v1

Soil and comparative environmental metagenomics

Timothy M Vogel , Catherine Larose , Pascal Simonet , Tom O. Delmont
Indo-French Workshop on Environmental Biotechnology (Molecular Ecology & Environmental Engineering), Feb 2015, Bhubaneswar, India
Communication dans un congrès hal-01974548 v1

Metagenomic and metagenic approaches applied to enhanced anaerobic reductive dechlorination of polychlorinated biphenyls: linking structure and function

Sébastien Cecillon , Timothy M Vogel
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974644 v1

Microbial community structure and function vertical distribution in snowpack over sea ice from Greenlandic fjord

Lorrie Maccario , Shelly Carpenter , Jody W. Deming , Timothy M Vogel , Catherine Larose
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974636 v1

The effect of the potential on bacterial adhesion to the anode in microbial fuel cell

Alexiane Godain , Jean-Michel Monier , Timothy M Vogel , Naoufel Haddour
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01946360 v1

Viral-host interactions in glacial ice and their adaptive significance

Laura Sanguino Casado , Timothy M Vogel , Catherine Larose
Polar and Alpine Microbiology (PAM) congress, Sep 2015, České Budějovice, Czech Republic
Communication dans un congrès hal-01976700 v1

Microbial Social Networks in Contaminated Soils

Sébastien Cecillon , Timothy M Vogel
Ecology of soil Microorganisms, Nov 2015, Prague, Czech Republic
Communication dans un congrès hal-01976791 v1

Microbial ecology approach of anodic biofilms for the study of scaled-up microbial fuel cells

Agathe Paitier , Naoufel Haddour , Timothy M Vogel
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01626839 v1

The effect of adhesion force between bacteria and anode on electron transfer from acetate to anode in microbial fuel cells

Alexiane Godain , Jean-Michel Monier , Timothy M Vogel , Naoufel Haddour
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974648 v1

Cold environments as “hot spots” for microbial adaptation and evolution: Arctic snow and ice in the context of change

Catherine Larose , Lorrie Maccario , Laura Sanguino Casado , Aurélien E Dommergue , Timothy M Vogel
Goldschmidt Conference, Aug 2015, Prague, Czech Republic
Communication dans un congrès hal-01976628 v1

Microbial life in the arctic snowpack photochemical reactor

Lorrie Maccario , Shelly Carpenter , Jody W. Deming , Timothy M Vogel , Catherine Larose
Polar and Alpine Microbiology (PAM) congress, Sep 2015, České Budějovice, Czech Republic
Communication dans un congrès hal-01976684 v1

Microbial diversity and function in Arctic ice and snow

Lorrie Maccario , Laura Sanguino Casado , Timothy M Vogel , Catherine Larose
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974649 v1

Arctic snowpack-soil interface - strict boundary or ecosystem trading zone?

Christoph Keuschnig , Mats Björkman , Timothy M Vogel , Catherine Larose
Polar and Alpine Microbiology (PAM) congress, Sep 2015, České Budějovice, Czech Republic
Communication dans un congrès hal-01976691 v1

Environmental start-ups

Timothy M Vogel
Industrial Fair, Sep 2015, Lyon, France
Communication dans un congrès hal-01976738 v1

Electrochemistry and microbial ecology evaluation of anodic biofilms for improved microbial fuel cells scale-up

Agathe Paitier , Naoufel Haddour , Timothy M Vogel
ISMET 2015, Oct 2015, Tempe, Arizona, United States
Communication dans un congrès hal-01976769 v1

Why Metagenomics?

Timothy M Vogel
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974642 v1

Characterization of a Microbial Fuel Cell with a New Configuration for Scale-up in Wastewater Treatment Plant

Agathe Paitier , P. Antoni , C. Averoux , S. Béasse , P. de Boisset et al.
ISMET 2015, Oct 2015, Tempe, Arizona, United States
Communication dans un congrès hal-01626859 v1

Large Scale Spatial Analysis of Bacterial Communities in Lake Sediments, the Role of Physico-Chemical Parameters, Spatial Distance, Land Cover and Tropical Storms

Jean-Sébastien Beaulne , Timothy M Vogel
Ecology of soil Microorganisms, Nov 2015, Prague, Czech Republic
Communication dans un congrès hal-01976816 v1

Large scale spatial analysis of bacterial communities in lake sediments, the role of physico-chemical parameters, spatial distance, land cover and tropical storms

Jean-Sébastien Beaulne , Samir Mishra , Mrutyunjay Suar , Timothy M Vogel
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974628 v1

The effect of the potential on bacterial competition to colonize the anodic surface in Microbial Fuel Cells

Alexiane Godain , Jean-Michel Monier , Timothy M Vogel , Naoufel Haddour
ISMET 2015, Oct 2015, Tempe, Arizona, United States
Communication dans un congrès hal-01976764 v1

Electrochemical analysis of permselective properties of anodic biofilms in microbial fuel cells

Naoufel Haddour , Alexiane Godain , Agathe Paitier , Timothy M Vogel
ISMET 2015, Oct 2015, Tempe, Arizona, United States
Communication dans un congrès hal-01946357 v1

Comparative Metagenomics

Timothy M Vogel
Science without Borders, Apr 2015, Florianópolis, Brazil
Communication dans un congrès hal-01974581 v1

Microbial diversity and function during different bioremediation strategies of diesel-polluted soil

Thibaud Masy , Serge Hiligsmann , Philippe Thonart , Philippe Jacques , Timothy M Vogel
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974638 v1

Viral-host interactions in the environment and their adaptive significance

Laura Sanguino Casado , Timothy M Vogel , Catherine Larose
BAGECO 13 : The microbial continuity across changing ecosystems, Jun 2015, Milan, Italy
Communication dans un congrès hal-01974633 v1

Application of Molecular Biology for the Understanding, Engineering and Modeling of Chlorinated Solvent Bioremediation

Timothy M Vogel , Alexiane Godain , Maude M. David , Cédric Malandain , Olivier Sibourg et al.
BATTELLE BIOREMEDIATION CONFERENCE Third International Symposium on Bioremediation and Sustainable Environmental Technologies, May 2015, Miami, FL, United States
Communication dans un congrès hal-01974596 v1

Biodechlord search for evidence for microbial degradation of chlordecone in French West Indies contaminated soils

Fabrice Martin-Laurent , Chloé Merlin , Stéphane Vuilleumier , G. Imfeld , Timothy M Vogel et al.
Intersol'2014, Mar 2014, Lille, France. 1p
Communication dans un congrès hal-01192455 v1

The Arctic snowpack microbial community highlighted by metagenomics and metatranscriptomics

Lorrie Maccario , Catherine Larose , Timothy M. Vogel
2nd Thünen Symposium on soil metagenomics, Dec 2013, Braunschweig, Germany
Communication dans un congrès hal-00925332 v1

The Arctic snowpack microbial community highlighted by metagenomics and metatranscriptomics

Lorrie Maccario , Timothy M. Vogel , Catherine Larose
PAM5, Sep 2013, Big Sky, Montana, United States. pp.36
Communication dans un congrès hal-00932231 v1

Apport du séquençage massif à l'étude de la diversité et du fonctionnement des communautés bactériennes

Elisabeth Navarro , Riccardo Scorretti , Timothy M Vogel , Pascal Simonet
ÉVOLUTION ET BIODIVERSITÉ MICROBIENNE IMPACT DU SÉQUENÇAGE DE NOUVELLE GÉNÉRATION, Dec 2009, Paris, France
Communication dans un congrès hal-00440051 v1

FROM “OMICS” TO “OHMICS”: ELECTRICITYPRODUCING BACTERIAL COMMUNITY STRUCTURES IN MICROBIAL FUEL CELLS

Jean-Michel Monier , Delina Y. Lyon , Sébastien Cecillon , François Buret , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399261 v1

GENOME FLEXIBILITY ACROSS DIFFERENT STRAINS OF THE HEXACHLOROCYCLANE-DEGRADING BACTERIUM SPHINGOBIUM FRANCENSE SP+ IDENTIFIED BY A GLOBAL APPROACH OF GENOME SEQUENCING AND MICROARRAY COMPARATIVE GENOMIC HYBRIDIZATION

Sibel Berger , Sébastien Cecillon , Cécile Thion , Maude M. David , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399182 v1

Characterization of denitrification gene clusters of soil bacteria via a metagenomic approach

Sandrine Demanèche , Laurent Philippot , Maude M. David , Elisabeth Navarro , Timothy M Vogel et al.
FEMS 2009 – Third Congress of European Microbiologists : Microbes and Man – Interdependence and Future Challenges, Jun 2009, Goteborg, Sweden
Communication dans un congrès hal-00411820 v1

ASSESSING DEHALOGENASE ACTIVITIES UTILIZING INTEGRATING QUANTITATIVE PCR AND MICROARRAYS DURING PCE BIOREMEDIATION : THE CONTRUCTION OF A NEW DEGRADATION MODEL

Maude M. David , Sébastien Cecillon , Elisabeth Navarro , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399232 v1

COMPARISON BETWEEN TOTAL AND ACTIVE BACTERIAL COMMUNITIES IN SOIL CONTAMINATED BY CHLORINATED COMPOUNDS, USING PYROSEQUENCING AND MICROARRAYS

Maude M. David , Elisabeth Navarro , Janet K. Jansson , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399231 v1

STRUCTURE AND PERFORMANCE OF ELECTRO-ACTIVE BACTERIAL COMMUNITIES IN MICROBIAL FUEL CELLS UNDER VARYING OPERATING CONDITIONS

Delina Y. Lyon , Adrien Vigneron , François Buret , Timothy M Vogel , Jean-Michel Monier
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399263 v1

COMPARATIVE ANALYSIS OF MICROARRAY, RISA AND SEQUENCING APPROACHES FOR MICROBIAL COMMUNITY ANALYSES

Sébastien Cecillon , Elisabeth Navarro , Riccardo Scorretti , Jean-Michel Monier , Aurélie Faugier et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399230 v1

LIGHTNING-ASSISTED ENVIRONMENTAL GENETIC THERAPY

Delina Y. Lyon , Jérémy Pivetal , Pascal Simonet , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399257 v1

ASSESSING INTERACTIONS BETWEEN MERCURY AND MICROBIAL POPULATIONS IN THE SNOWPACK: A METAGENOMIC APPROACH

Catherine Larose , Sibel Berger , Christophe P. Ferrari , Elisabeth Navarro , Aurélien Dommergue et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399256 v1

IS EVERYTHING EVERYWHERE?

Aurélie Faugier , Saliou Fall , Timothy M Vogel , Pascal Simonet
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399250 v1

MICROBIAL CANNIBALISM IN EXTREME STARVED ENVIRONMENT

Elisabeth Navarro , Riccardo Scorretti , Pascal Simonet , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399177 v1

SOIL METAGENOMIC: WHERE IS THE DIVERSITY?

Tom Delmont , Florentin Constancias , Sébastien Cecillon , Elisabeth Navarro , Pascal Simonet et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399234 v1

WHERE DO DEHALOGENASES COME FROM ? A MULTIDISCIPLINARY STUDY HIGHLIGHTS THE PRIMARY ROLE OF HORIZONTAL GENE TRANSFER DURING RECENT FUNCTIONAL ADAPTATION

Maude M. David , Sibel Berger , Margaux Mesle , Pascal Simonet , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399233 v1

DISTRIBUTION AND REGULATION OF CYTOCHROMES P450 INVOLVED IN FUEL OXYGENATES DEGRADATION

Cédric Malandain , Françoise Fayolle-Guichard , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399251 v1

GEOMICROBIOLOGY OF EXTREME SOILS

Cédric Malandain , Jean-Paul Ambrosi , Elodie Vicini , Sébastien Cecillon , Timothy M Vogel et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399260 v1

Maîtrise de la dispersion des gènes de résistance aux antibiotiques en milieux naturels (AntiReSol)

Sandrine Demanèche , John Poté , Hervé Sanguin , Dominique Bernillon , Patrick Mavingui et al.
Congrès AFEM, Aug 2009, Ecully, France
Communication dans un congrès hal-00411821 v1

COMPLETE SEQUENCING OF THE SOIL METAGENOME: AN ATTAINABLE UTOPIA?

Pascal Simonet , Elisabeth Navarro , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology - Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Communication dans un congrès hal-00399175 v1
Image document

Metagenomic library selection and validation by pyrosequencing

Sandrine Demanèche , Elisabeth Navarro , Maude David , Laurent Philippot , Renaud Nalin et al.
ISME 12. International Symposium on Microbial Ecology, Aug 2008, Cairns, Australia. 1 p
Communication dans un congrès hal-01190317 v1

Geomicrobiology of extreme soils along a transect-slope

Cédric Malandain , Jean-Paul Ambrosi , Elodie Vicini , Sébastien Cecillon , Timothy M Vogel et al.
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Communication dans un congrès hal-00399434 v1

HOW MICROBIAL COMMUNITY STRUCTURE AND FUNCTION RELATE TO EACH OTHER WHEN CHLORINATED COMPOUNDS ARE INVOLVED

Maude M. David , Margaux Mesle , Cédric Malandain , Sébastien Cecillon , Elisabeth Navarro et al.
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Communication dans un congrès hal-00399439 v1

METAGENOMIC: INSIGHTS ON EXTREME METABOLISM

Elisabeth Navarro , Riccardo Scorretti , Aurélie Faugier , Timothy M Vogel
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Communication dans un congrès hal-00399436 v1

Environmental resistome transcriptional response to gentamicin pollution

C Sanchez-Cid , A Guironnet , Laure Franqueville , L Wiest , E Vulliet et al.
5th International Symposium on the Environmental Dimension of Antibiotic Resistance, Jun 2019, Hong Kong, China
Poster de conférence hal-04768802 v1