ugo cenci

23
Documents

Présentation

I am passionate about both protists (physiology and evolution) and carbohydrate active enzymes (CAZymes). Thus, I am using CAZy annotation to understand the physiology of protists and eukaryotes evolution, through several pipelines of phylogeny and annotation. In addition, we are developing in our lab selection of mutants in several exotic organisms and characterization of CAZyme involved in storage polysaccharide metabolism. All those approaches have allowed us to formulate several hypotheses to understand endosymbiosis events, but also pathogenic interaction (particularly with Chlamydia). We have also used comparative biochemistry in starch metabolism that led to major breakthrough in our understanding of this metabolism.


Publications

Publications

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How to upgrade stolen organelles into permanent plastids: A comparative transcriptomic perspective

Norico Yamada , Richard Dorrell , Ugo Cenci , Peter Kroth , Vincent Lombard et al.

Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (40), ⟨10.1073/pnas.2514821122⟩

Article dans une revue hal-05338563v1
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Kre6 (yeast 1,6-β-transglycosylase) homolog, PhTGS, is essential for β-glucan synthesis in the haptophyte Pleurochrysis haptonemofera

Mayuka Inukai , Naoya Kobayashi , Hirotoshi Endo , Koki Asakawa , Keisuke Amano et al.

Frontiers in Bioengineering and Biotechnology, 2023, Frontiers in Bioengineering and Biotechnology, 11, ⟨10.3389/fbioe.2023.1259587⟩

Article dans une revue hal-04221286v1
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Induction of photosynthesis under anoxic condition in Thalassiosira pseudonana and Euglena gracilis: interactions between fermentation and photosynthesis

Gwenaëlle Gain , Nicolas Berne , Tom Feller , Damien Godaux , Ugo Cenci et al.

Frontiers in Plant Science, 2023, Frontiers in Plant Science, 14, ⟨10.3389/fpls.2023.1186926⟩

Article dans une revue hal-04221387v1
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One of the isoamylase isoforms, CMI294C, is required for semi-amylopectin synthesis in the rhodophyte Cyanidioschyzon merolae

Toshiki Maeno , Yuki Yamakawa , Yohei Takiyasu , Hiroki Miyauchi , Yasunori Nakamura et al.

Frontiers in Plant Science, 2022, 13, pp.967165. ⟨10.3389/fpls.2022.967165⟩

Article dans une revue hal-03782807v1
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Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida

Ryoma Kamikawa , Takako Mochizuki , Mika Sakamoto , Yasuhiro Tanizawa , Takuro Nakayama et al.

Science Advances , 2022, Science Advances, 8 (17), pp.eabi5075. ⟨10.1126/sciadv.abi5075⟩

Article dans une revue hal-03677948v1
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Conservation of the glycogen metabolism pathway underlines a pivotal function of storage polysaccharides in Chlamydiae

Matthieu Colpaert , Derifa Kadouche , Mathieu Ducatez , Trestan Pillonel , Carole Kebbi-Beghdadi et al.

Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-01794-y⟩

Article dans une revue hal-03174571v1
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Retracing Storage Polysaccharide Evolution in Stramenopila

Malika Chabi , Marie Leleu , Lea Fermont , Matthieu Colpaert , Christophe Colleoni et al.

Frontiers in Plant Science, 2021, 12, pp.629045. ⟨10.3389/fpls.2021.629045⟩

Article dans une revue hal-03268608v1
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Substitution of nucleotide-sugar by trehalose-dependent glycogen synthesis pathways in Chlamydiales underlines an unusual requirement for storage polysaccharides within obligate intracellular bacteria

Matthieu Colpaert , Derifa Kadouche , Mathieu Ducatez , Trestan Pillonel , Carole Kebbi-Beghdadi et al.

BioRxiv, 2020, BioRxiv, ⟨10.1101/2020.06.02.131169⟩

Article dans une revue hal-03382208v1
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Analysis of an improved Cyanophora paradoxa genome assembly

Dana C Price , Ursula W Goodenough , Robyn Roth , Jae-Hyeok Lee , Thamali Kariyawasam et al.

DNA Research, 2019, DNA Research, 26 (4), pp.287-299. ⟨10.1093/dnares/dsz009⟩

Article dans une revue hal-03095856v1
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Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids

Ugo Cenci , Shannon Sibbald , Bruce Curtis , Ryoma Kamikawa , Laura Eme et al.

BMC Biology, 2018, 16 (1), pp.137. ⟨10.1186/s12915-018-0593-5⟩

Article dans une revue hal-02046523v1
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Host-pathogen biotic interactions shaped vitamin K metabolism in Archaeplastida

Ugo Cenci , H. Qiu , T. Pillonel , P. Cardol , C. Remacle et al.

Scientific Reports, 2018, Scientific Reports, 8 (1), ⟨10.1038/s41598-018-33663-w⟩

Article dans une revue hal-04474776v1
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Identification and localization of peroxisomal biogenesis proteins indicates the presence of peroxisomes in the cryptophyte Guillardia theta and other ‘chromalveolates’

Ann-Kathrin Mix , Ugo Cenci , Thomas Heimerl , Pia Marter , Marie-Louise Wirkner et al.

Genome Biology and Evolution, 2018, 10 (10), pp.2834-2852. ⟨10.1093/gbe/evy214⟩

Article dans une revue hal-03286983v1

Biotic Host–Pathogen Interactions As Major Drivers of Plastid Endosymbiosis

Ugo Cenci , Debashish Bhattacharya , Andreas Weber , Christophe Colleoni , Agathe Subtil et al.

Trends in Plant Science, 2017, 22 (4), pp.316 - 328. ⟨10.1016/j.tplants.2016.12.007⟩

Article dans une revue pasteur-01909401v1
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A Cell Wall Proteome and Targeted Cell Wall Analyses Provide Novel Information on Hemicellulose Metabolism in Flax

Malika Chabi , Estelle Goulas , Celine Leclercq , Isabelle de Waele , Christophe Rihouey et al.

Molecular and Cellular Proteomics, 2017, 16 (9), pp.1634 - 1651. ⟨10.1074/mcp.M116.063727⟩

Article dans une revue hal-01777680v1
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Reconstruction of the sialylation pathway in the ancestor of eukaryotes

Daniel Petit , Elin Teppa , Ugo Cenci , Steven Ball , Anne Harduin-Lepers

Scientific Reports, 2017, 8 (1), pp.2946. ⟨10.1038/s41598-018-20920-1⟩

Article dans une revue hal-01741232v1
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Was the Chlamydial Adaptative Strategy to Tryptophan Starvation an Early Determinant of Plastid Endosymbiosis?

Ugo Cenci , Mathieu Ducatez , Derifa Kadouche , Christophe Colleoni , Steven Ball

Frontiers in Cellular and Infection Microbiology, 2016, Frontiers in Cellular and Infection Microbiology, 6, ⟨10.3389/fcimb.2016.00067⟩

Article dans une revue hal-03166435v1
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Characterization of function of the GlgA2 glycogen/starch synthase in cyanobacterium sp. Clg1 highlights convergent evolution of glycogen metabolism into starch granule aggregation

Derifa Kadouche , Mathieu Ducatez , Ugo Cenci , Catherine Tirtiaux , Eiji Suzuki et al.

Plant Physiology, 2016, 171 (3), pp.1879-1892. ⟨10.1104/pp.16.00049⟩

Article dans une revue hal-02427902v1

Transition from glycogen to starch metabolism in Archaeplastida.

Ugo Cenci , Felix Nitschke , Martin Steup , Berge A Minassian , Christophe Colleoni et al.

Trends in Plant Science, 2013, epub ahead of print. ⟨10.1016/j.tplants.2013.08.004⟩

Article dans une revue istex hal-00863991v1

Metabolic Effectors Secreted by Bacterial Pathogens: Essential Facilitators of Plastid Endosymbiosis?

Steven G Ball , Agathe Subtil , Debashish Bhattacharya , Ahmed Moustafa , Andreas P M Weber et al.

The Plant cell, 2013, epub ahead of print. ⟨10.1105/tpc.112.101329⟩

Article dans une revue hal-00784600v1

Convergent Evolution of Polysaccharide Debranching Defines a Common Mechanism for Starch Accumulation in Cyanobacteria and Plants.

Ugo Cenci , Malika Chabi , Mathieu Ducatez , Catherine Tirtiaux , Jennifer Nirmal-Raj et al.

The Plant cell, 2013, pp.3961-3975. ⟨10.1105/tpc.113.118174⟩

Article dans une revue hal-00879018v1

The evolution of glycogen and starch metabolism in eukaryotes gives molecular clues to understand the establishment of plastid endosymbiosis.

Steven Ball , Christophe Colleoni , Ugo Cenci , Jenifer Nirmal Raj , Catherine Tirtiaux

Journal of Experimental Botany, 2011, epub ahead of print. ⟨10.1093/jxb/erq411⟩

Article dans une revue hal-00555126v1

Biologie intégrative des organismes photosynthétiques et micro-organismes associés

Cécile Raynaud , Laurent Nussaume , Fabrice Besnard , Ugo Cenci , Daniel Clesse et al.

CNRS - Biologie intégrative des organismes photosynthétiques et micro-organismes associés (Section 23). 2025, pp.381-389

Rapport (rapport d’expertise collective) hal-05492655v1
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Storage Polysaccharides in Prokaryotes: Glycogen, Granulose, and Starch-Like Granules

Matthieu Colpaert , Malika Chabi , Ugo Cenci , Christophe Colleoni

Bacterial Organelles and Organelle-like Inclusions, Springer Nature (Switzerland), pp.177-210, 2021, 978-3-030-60172-0. ⟨10.1007/978-3-030-60173-7_8⟩

Chapitre d'ouvrage hal-03268739v1