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Valentina Baldazzi



### Employment ### 2016- present Researcher (CRCN), Institut Sophia Agrobiotech, INRAE, Sophia-Antipolis, France and Biocore project-team, Inria, Sophia-Antipolis, France 2010-2016 Researcher (CR2), Unit Plantes et systèmes de cultures Horticoles (PSH), INRA, Avignon, France 2007-2009 Post-doc, Ibis project-team, Inria, Grenoble, France 2006-2007 Post-doc, Instituto Applicazioni del Calcolo (IAC), Italian National Research Council (CNR), Rome, Italy ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ### Education &amp; Training July 2021 HdR defence, ED SVS, section 67, University Côte d'Azur 2002-2005 PhD in Physics, University of Rome "Tor Vergata" and University of Strasbourg "Louis Pasteur" 1997-2002 M.S. in Physics, University of Rome "La Sapienza" ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ``` ``` <pre style="-qt-block-indent: 0; text-indent: 0px; margin: 0px;">  ```


Resource allocation accounts for the large variability of rate-yield phenotypes across bacterial strains

Valentina Baldazzi , Delphine Ropers , Jean-Luc Gouzé , Tomas Gedeon , Hidde de Jong
eLife, 2023, 12, pp.1-29. ⟨10.7554/eLife.79815⟩
Journal articles hal-04145943v2
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Model-assisted comparison of sugar accumulation patterns in ten fleshy fruits highlights differences between herbaceous and woody species

Coffi Belmys Cakpo , Gilles Vercambre , Valentina Baldazzi , Léa Roch , Zhanwu Dai
Annals of Botany, 2020, 126 (3), pp.455-470. ⟨10.1093/aob/mcaa082⟩
Journal articles hal-02749663v1
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Reducing a model of sugar metabolism in peach to catch different patterns among genotypes

Hussein Kanso , Bénédicte Quilot-Turion , Mohamed-Mahmoud Memah , Olivier Bernard , Jean-Luc Gouzé
Mathematical Biosciences, 2020, 321, pp.108321. ⟨10.1016/j.mbs.2020.108321⟩
Journal articles hal-02922359v1
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Leaf Production and Expansion: A Generalized Response to Drought Stresses from Cells to Whole Leaf Biomass—A Case Study in the Tomato Compound Leaf

Garance Koch , Gaëlle Rolland , Myriam Dauzat , Alexis Bediée , Valentina Baldazzi
Plants, 2019, 8 (10), pp.409. ⟨10.3390/plants8100409⟩
Journal articles hal-02407529v1
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Organ-wide and ploidy-dependent regulation both contribute to cell-size determination: evidence from a computational model of tomato fruit

Valentina Baldazzi , Pierre Valsesia , Michel Génard , Nadia Bertin
Journal of Experimental Botany, 2019, 70 (21), pp.6215-6228. ⟨10.1101/450916⟩
Journal articles hal-02407512v1
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A kinetic model of sugar metabolism in peach fruit reveals a functional hypothesis of markedly low fructose-to-glucose ratio phenotype

Elsa Desnoues , Michel Génard , Bénédicte Quilot-Turion , Valentina Baldazzi
Plant Journal, 2018, 94 (4), pp.685-698. ⟨10.1111/tpj.13890⟩
Journal articles hal-01953042v1
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Are compound leaves more complex than simple ones? A multi-scale analysis

Garance Koch , Gaelle Rolland , Myriam Dauzat , Alexis Bediee , Valentina Baldazzi
Annals of Botany, 2018, 122 (7), pp.1173-1185. ⟨10.1093/aob/mcy116⟩
Journal articles hal-01953068v1
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Explore the best sugar factory: the fruit

Elsa Desnoues , Michel Génard , Bénédicte Quilot-Turion , Valentina Baldazzi
TheScienceBreaker, 2018, ⟨10.25250/thescbr.brk124⟩
Journal articles hal-01953091v1

A kinetic model of sugar metabolism allows the simulation of sugar concentrations and their genetic variability during peach fruit growth

Elsa Desnoues , Michel Génard , Bénédicte Quilot-Turion , Valentina Baldazzi
Acta Horticulturae, 2017, 1160, pp.361-366. ⟨10.17660/ActaHortic.2017.1160.52⟩
Journal articles hal-01607920v1
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A kinetic model of sugar metabolism in peach fruit allows the exploration of genetic variability

Elsa Desnoues , Michel Génard , Bénédicte Quilot-Turion , Valentina Baldazzi
Acta Horticulturae, 2017, 1182, pp.169-176. ⟨10.17660/ActaHortic.2017.1182.20⟩
Journal articles hal-01662057v1
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Cell division, endoreduplication and expansion processes: setting the cell and organ control into an integrated model of tomato fruit development

Valentina Baldazzi , Michel Génard , Nadia Bertin
Acta Horticulturae, 2017, 1182, pp.257 - 264. ⟨10.17660/ActaHortic.2017.1182.31⟩
Journal articles hal-01661920v1
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Model-Assisted Estimation of the Genetic Variability in Physiological Parameters Related to Tomato Fruit Growth under Contrasted Water Conditions

Dario Constantinescu , Mohamed Memmah , Gilles Vercambre , Michel Génard , Valentina Baldazzi
Frontiers in Plant Science, 2016, 7, ⟨10.3389/fpls.2016.01841⟩
Journal articles hal-01475599v1
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Integrating Physiology and Architecture in Models of Fruit Expansion

Mikolaj Cieslak , Ibrahim Cheddadi , Frédéric Boudon , Valentina Baldazzi , Michel Génard
Frontiers in Plant Science, 2016, 7, pp.19. ⟨10.3389/fpls.2016.01739⟩
Journal articles hal-01400062v1

Dynamic QTLs for sugars and enzyme activities provide an overview of genetic control of sugar metabolism during peach fruit development

Elsa Desnoues , Valentina Baldazzi , Michel Génard , Jehan-Baptiste Mauroux , Patrick Lambert
Journal of Experimental Botany, 2016, 67 (11), pp.3419-3431. ⟨10.1093/jxb/erw169⟩
Journal articles hal-01343639v1
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Inter-species comparative analysis of components of soluble sugar concentration in fleshy fruits

Zhanwu Dai , Huan Wu , Valentina Baldazzi , Cornelis van Leeuwen , Nadia Bertin
Frontiers in Plant Science, 2016, 7, 12 p. ⟨10.3389/fpls.2016.00649⟩
Journal articles hal-02523722v1

A multi-scale pipeline for reproducible analyses of tomato leaf expansion and its plasticity

Garance Koch , Anaëlle Dambreville , Gaelle Rolland , Myriam Dauzat , Christian Chevalier
Acta Horticulturae, 2016, in press, ⟨10.17660/ActaHortic.2017.1160.15⟩
Journal articles hal-01512024v1
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Metabolic studies in plant organs: don't forget dilution by growth

Michel M. Génard , Valentina Baldazzi , Yves Y. Gibon
Frontiers in Plant Science, 2014, 5, pp.1-5. ⟨10.3389/fpls.2014.00085⟩
Journal articles hal-02636620v1
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Profiling sugar metabolism during fruit development in a peach progeny with different fructose-to-glucose ratios.

Elsa Desnoues , Yves Y. Gibon , Valentina Baldazzi , Veronique Signoret , Michel M. Génard
BMC Plant Biology, 2014, 14 (1), pp.336 : 1-12. ⟨10.1186/s12870-014-0336-x⟩
Journal articles hal-02631892v1
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In-silico analysis of water and carbon relations under stress conditions

Valentina Baldazzi , Amélie A. Pinet , Gilles G. Vercambre , Camille Bénard , Benoit Biais
Frontiers in Plant Science, 2013, 4, ⟨10.3389/fpls.2013.00495⟩
Journal articles hal-02651667v1

Towards multiscale plant models: integrating cellular networks

Valentina Baldazzi , Nadia Bertin , Hidde de Jong , Michel Génard
Trends in Plant Science, 2012, 17 (12), pp.728-736. ⟨10.1016/j.tplants.2012.06.012⟩
Journal articles hal-00762615v1

Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in Escherichia coli

Valentina Baldazzi , Delphine Ropers , Johannes Geiselmann , Daniel Kahn , Hidde de Jong
Journal of Theoretical Biology, 2012, 295, pp.100-115. ⟨10.1016/j.jtbi.2011.11.010⟩
Journal articles hal-00762570v1

Model reduction using piecewise-linear approximations preserves dynamic properties of the carbon starvation response in Escherichia coli

Delphine Ropers , Valentina Baldazzi , Hidde De Jong
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011, 8, pp.166-181. ⟨10.1109/TCBB.2009.49⟩
Journal articles hal-00793034v1
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The carbon assimilation network in Escherichia coli is densely connected and largely sign-determined by directions of metabolic fluxes.

Valentina Baldazzi , Delphine Ropers , Yves Markowicz , Daniel Kahn , Johannes Geiselmann
PLoS Computational Biology, 2010, 6 (6), pp.e1000812. ⟨10.1371/journal.pcbi.1000812⟩
Journal articles inria-00527140v1
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Modeling lymphocyte homing and encounters in lymph nodes

Valentina Baldazzi , Paola Paci , Massimo Bernaschi , Filippo Castiglione
BMC Bioinformatics, 2009, 10 (1), pp.387. ⟨10.1186/1471-2105-10-387⟩
Journal articles hal-00784447v1
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Inferring DNA sequences from mechanical unzipping data: the large-bandwidth case.

Valentina Baldazzi , Serena Bradde , Simona Cocco , Enzo Marinari , Remi Monasson
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2007, 75, pp.011904
Journal articles hal-00142549v1

On the inference of DNA sequences from mechanical unzipping experiments

Remi Monasson , Valentina Baldazzi , Simona Cocco , Enzo Marinari
Physical Review Letters, 2006, pp.96, 128102
Journal articles hal-00287412v1

Anticiper les impacts du changement climatique sur la qualité des fruits et le rendement, l’apport de la modélisation

Hélène Gautier , Valentina Baldazzi , Nadia Bertin , G. Vercambre , Michel Génard
Quae. Les productions fruitières à l’heure du changement climatique : risques et opportunités en régions tempérées, chapitre 9, Quae, 2022, 9782759232512Qua
Book sections hal-03745363v1

Challenges in integrating genetic control in plant and crop models

Valentina Baldazzi , Nadia Bertin , Michel Génard , Hélène Gautier , Elsa Desnoues
Crop Systems Biology, Editions Springer, 233 p., 2016, 978-3-319-20562-5. ⟨10.1007/978-3-319-20562-5_1⟩
Book sections hal-01271238v1

Process-based simulation models are essential tools for virtual profiling and design of ideotypes: Example of fruit and root

Michel M. Génard , Mohamed-Mahmoud Memmah , Bénédicte Quilot-Turion , Gilles G. Vercambre , Valentina Baldazzi
Crop systems biology - narrowing the gaps between crop modelling and genetics, , 2016, ⟨10.1007/978-3-319-20562-5_4⟩
Book sections hal-02798887v1

Ecophysiological process-based model to simulate carbon fluxes in plants

Gilles Vercambre , Valentina Baldazzi , Nadia Bertin , Hélène Gautier , Michel Génard
Plant metabolic flux analysis: methods and protocols, Humana Press, 376 p., 2014, Methods in Molecular Biology, 978-1627036870. ⟨10.1007/978-1-62703-688-7_21⟩
Book sections hal-01310588v1

Qualitative analysis of genetic regulatory networks in bacteria

Valentina Baldazzi , Pedro T. Monteiro , Michel Page , Delphine Ropers , Hans Geiselmann
W. Dubitzky and J. Southgate and H. Fuss. Understanding the Dynamics of Biological Systems: Lessons Learned from Integrative Systems Biology, Springer, pp.111-130, 2011, 978-1-4419-7964-3. ⟨10.1007/978-1-4419-7964-3_6⟩
Book sections hal-00793038v1