Veronique Brunaud

Publications

Article dans une revue (56)

Harnessing the spatial and transcriptional regulation of monoterpenoid indole alkaloid metabolism in Alstonia scholaris leads to the identification of broad geissoschizine cyclase activities Louis-Valentin Méteignier,Sarah Szwarc,Patra Barunava,Mickael Durand,Duchesse-Lacours Zamaret al. Plant Physiology and Biochemistry, 2025, 219, pp.109363. ⟨10.1016/j.plaphy.2024.109363⟩ Article dans une revue hal-04810555v1
RNAseq based variant dataset in a black poplar association panel Odile Rogier,Aurélien Chateigner,Marie-Claude Lesage-Descauses,Claire Mandin,Véronique Brunaudet al. BMC Research Notes, 2023, 16, pp.248. ⟨10.1186/s13104-023-06521-w⟩ Article dans une revue hal-04225417v1
An mTRAN-mRNA interaction mediates mitochondrial translation initiation in plants Huy Cuong Tran,Vivian Schmitt,Sbatie Lama,Chuande Wang,Alexandra Launay-Avonet al. Science, 2023, 381 (6661), ⟨10.1126/science.adg0995⟩ Article dans une revue hal-04194228v1
A comprehensive map of preferentially located motifs reveals distinct proximal cis -regulatory elements in plants Julien Rozière,Cécile Guichard,Véronique Brunaud,Marie-Laure Martin,Sylvie Coursol Frontiers in Plant Science, 2022, 13, pp.976371. ⟨10.3389/fpls.2022.976371⟩ Article dans une revue hal-04400803v1
Strive or thrive: Trends in Phytophthora capsici gene expression in partially resistant pepper Gaëtan Maillot,Emmanuel Szadkowski,Anne Massire,Véronique Brunaud,Guillem Rigaillet al. Frontiers in Plant Science, 2022, 13 (980587), pp.1-19. ⟨10.3389/fpls.2022.980587⟩ Article dans une revue hal-03908269v1
Evolutionary analyses and expression patterns of TCP genes in Ranunculales Catherine Damerval,Carmine Claudot,Martine Le Guilloux,Natalia Conde e Silva,Véronique Brunaudet al. Frontiers in Plant Science, 2022, 13, pp.1055196. ⟨10.3389/fpls.2022.1055196⟩ Article dans une revue hal-04174202v1
Apical dominance control by TAR-YUC-mediated auxin biosynthesis is a deep homology of land plants Mattias Thelander,Katarina Landberg,Arthur Muller,Gladys Cloarec,Nik Cunniffeet al. Current Biology, 2022, 32 (17), pp.P3838-3846.E5. ⟨10.1016/j.cub.2022.06.064⟩ Article dans une revue hal-03766725v1
RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar Mamadou D. Sow,Anne‐laure Le Gac,Régis Fichot,Sophie Lanciano,Alain Delaunayet al. New Phytologist, 2021, 232 (1), pp.80-97. ⟨10.1111/nph.17555⟩ Article dans une revue hal-03292338v1
A Case of Gene Fragmentation in Plant Mitochondria Fixed by the Selection of a Compensatory Restorer of Fertility-Like PPR Gene Tan-Trung Nguyen,Noelya Planchard,Jennifer Dahan,Nadège Arnal,Sandrine Balzergueet al. Molecular Biology and Evolution, 2021, 38 (8), pp.3445 - 3458. ⟨10.1093/molbev/msab115⟩ Article dans une revue hal-05250764v1
Transcriptome Analysis Reveals Putative Target Genes of APETALA3-3 During Early Floral Development in Nigella damascena L. Yves Deveaux,Natalia Conde E Silva,Domenica Manicacci,Martine Le Guilloux,Véronique Brunaudet al. Frontiers in Plant Science, 2021, 12, ⟨10.3389/fpls.2021.660803⟩ Article dans une revue hal-03312790v1
Root Silicon Treatment Modulates the Shoot Transcriptome in Brassica napus L. and in Particular Upregulates Genes Related to Ribosomes and Photosynthesis Philippe Etienne,Jacques Trouverie,Cylia Haddad,Mustapha Arkoun,Jean-Claude Yvinet al. Silicon, 2020, ⟨10.1007/s12633-020-00710-z⟩ Article dans une revue hal-03150377v1
Plant nitrogen supply affects the Botrytis cinerea infection process and modulates known and novel virulence factors Marie‐christine Soulie,Shamsuddin Mia Koka,Kévin Floch,Baptiste Vancostenoble,Deborah Barbeet al. Molecular Plant Pathology, 2020, 21, pp.1436-1450. ⟨10.1111/mpp.12984⟩ Article dans une revue hal-02946967v1
Gene expression predictions and networks in natural populations supports the omnigenic theory Aurélien Chateigner,Marie-Claude Lesage-Descauses,Odile Rogier,Véronique Jorge,Jean-Charles Lepléet al. BMC Genomics, 2020, 21 (1), pp.1-16. ⟨10.1186/s12864-020-06809-2⟩ Article dans une revue hal-02902844v1
Transcriptomics at Maize Embryo/Endosperm Interfaces Identifies a Transcriptionally Distinct Endosperm Subdomain Adjacent to the Embryo Scutellum Nicolas Doll,Jérémy Just,Véronique Brunaud,José Caïus,Aurélie Grimaultet al. The Plant cell, 2020, 32 (4), pp.833-852. ⟨10.1105/tpc.19.00756⟩ Article dans une revue hal-03065555v1
Extensive nuclear reprogramming and endoreduplication in mature leaf during floral induction Stefania del Prete,Anne Molitor,Delphine Charif,Nadia Bessoltane-Bentahar,Ludivine Soubigou-Taconnatet al. BMC Plant Biology, 2019, 19, pp.135. ⟨10.1186/s12870-019-1738-6⟩ Article dans une revue hal-02618994v1
A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize Clément Cuello,Aurélie Baldy,Véronique Brunaud,Johann Joets,Etienne Delannoyet al. PLoS ONE, 2019, 14 (12), pp.e0227011. ⟨10.1371/journal.pone.0227011⟩ Article dans une revue hal-02429157v1
Silicon supply affects the root transcriptome of Brassica napus L. Cylia Haddad,Jacques Trouverie,Mustapha Arkoun,Jean-Claude Yvin,José Caiuset al. Planta, 2019, 249 (5), pp.1645-1651. ⟨10.1007/s00425-019-03120-7⟩ Article dans une revue hal-02184363v1
Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo Kaori Sakai,Ludivine Taconnat,Néro Borrega,Jennifer Yansouni,Véronique Brunaudet al. Plant Methods, 2018, 14, pp.10. ⟨10.1186/s13007-018-0275-x⟩ Article dans une revue hal-02625394v1
Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat Elodie Rey,Michaël M. Abrouk,Gabriel Keeble-Gagnère,Miroslava Karafiatova,Jan Vránaet al. Plant Biotechnology Journal, 2018, 16 (10), pp.1767-1777. ⟨10.1111/pbi.12913⟩ Article dans une revue hal-02621747v1
Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra Odile Rogier,Aurélien Chateigner,Souhila Amanzougarene,Marie-Claude Lesage Descauses,Sandrine Balzergueet al. BMC Genomics, 2018, 19, pp.909. ⟨10.1186/s12864-018-5239-z⟩ Article dans une revue hal-02622249v1
AgroDataRing: Une infrastructure partagée et mutualisée pour le stockage longue durée Pierre Adenot,Stéphane Bansard,David Benaben,Veronique Brunaud,Christophe Caronet al. Cahier des Techniques de l'INRA, 2018, N° Spécial: Données de la recherche, 7 p Article dans une revue hal-02097192v1
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis Guillem Rigaill,Sandrine Balzergue,Véronique Brunaud,Eddy Blondet,Andrea Rauet al. Briefings in Bioinformatics, 2016, 19 (1), pp.65-76. ⟨10.1093/bib/bbw092⟩ Article dans une revue hal-01595551v1
Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks. Isabelle Damiani,Alice Drain,Marjorie Guichard,Sandrine Balzergue,Alexandre Boscariet al. Frontiers in Plant Science, 2016, 7, pp.794. ⟨10.3389/fpls.2016.00794⟩ Article dans une revue hal-01354648v1
A Conserved Cytochrome P450 Evolved in Seed Plants Regulates Flower Maturation Zhenhua Liu,Benoit Boachon,Raphaël Lugan,Raquel Tavares,Mathieu Erhardtet al. Molecular Plant, 2015, 8 (12), pp.1751-1765. ⟨10.1016/j.molp.2015.09.002⟩ Article dans une revue hal-02437969v1
A conserved cytochrome P450 evolved in seed plants regulates flower development Z. Liu,B. Boachon,R. Lugan,R. Tavares,M. Erhardtet al. Molecular Plant, 2015, 8, pp.1751-1765 Article dans une revue hal-01252970v1
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response Rim Zaag,Jean-Philippe Tamby,Cecile Guichard,Zakia Tariq,Guillem Rigaillet al. Nucleic Acids Research, 2015, 43 (Database issue), pp.D1010-D1017. ⟨10.1093/nar/gku1155⟩ Article dans une revue hal-01137554v1
MYB118 Represses Endosperm Maturation in Seeds of Arabidopsis Guillaume Barthole,Alexandra To,Chloé Marchive,Véronique Brunaud,Ludivine Soubigou-Taconnatet al. The Plant cell, 2014, 26 (9), pp.3519 - 3537. ⟨10.1105/tpc.114.130021⟩ Article dans une revue hal-01204153v1
Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences Nicolas Frei Dit Frey,Anna Victoria Garcia,Jean Bigeard,Rim Zaag,Eduardo Buesoet al. Genome Biology, 2014, 15 (6), pp.R87. ⟨10.1186/gb-2014-15-6-r87⟩ Article dans une revue hal-02631808v1
The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana Heike Lange,Hélène Zuber,François M. Sement,Johanna Chicher,Lauriane Kuhnet al. PLoS Genetics, 2014, 10 (8), pp.e1004564. ⟨10.1371/journal.pgen.1004564⟩ Article dans une revue hal-01197631v1
PT-Flax (phenotyping and TILLinG of flax): development of a flax (Linum usitatissimum L.) mutant population and TILLinG platform for forward and reverse genetics M. Chantreau,S. Grec,L. Gutierrez,M. Dalmais,Christophe Pineauet al. BMC Plant Biology, 2013, 13 (159), pp.159. ⟨10.1186/1471-2229-13-159⟩ Article dans une revue hal-01093161v1
A TILLING platform for functional genomics in [i]Brachypodium distachyon[/i] Marion Dalmais,Sébastien Antelme,Marie-Séverine Ho-Yue-Kuang,Yin Wang,Olivier Darracqet al. PLoS ONE, 2013, 8 (6), ⟨10.1371/journal.pone.0065503⟩ Article dans une revue hal-01190604v1
Exploration of plant genomes in the FLAGdb++ environment Sandra S. Derozier,Franck F. Samson,Jean-Philippe Tamby,Cecile C. Guichard,Veronique V. Brunaudet al. Plant Methods, 2011, 7 (8), 10 p. ⟨10.1186/1746-4811-7-8⟩ Article dans une revue hal-02652189v1
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis François Roudier,Ikhlak I. Ahmed,Caroline C. Berard,Alexis A. Sarazin,Tristan Mary-Huardet al. EMBO Journal, 2011, 30 (10), pp.1928 - 1938. ⟨10.1038/emboj.2011.103⟩ Article dans une revue hal-00999846v1
Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome Caroline Berard,Marie-Laure Magniette,Veronique Brunaud,Sebastien Aubourg,Stephane Robin Statistical Applications in Genetics and Molecular Biology, 2011, 10 (1), pp.50. ⟨10.2202/1544-6115.1692⟩ Article dans une revue hal-01190201v1
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis François Roudier,Ikhlak Ahmed,Caroline Bérard,Alexis Sarazin,Tristan Mary-Huardet al. The EMBO Journal, 2011, 30 (10), pp.1928-1938. ⟨10.1038/emboj.2011.103⟩ Article dans une revue hal-04383147v1
Hight throughput identification of Pisum sativum mutant lines by TILLING: a tool for crop improvement using either forward of reverse genetics approaches Christine Lesignor,Marion M. Dalmais,Veronique V. Brunaud,Richard Thompson,Abdelhafid A. Bendahmane Grain Légumes, 2009, pp.18-19 Article dans une revue hal-02655984v1
A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance Marco Moroldo,Sophie Paillard,Raffaella Marconi,Fabrice Legeai,Aurélie Canaguieret al. BMC Plant Biology, 2008, 8 (66), pp.1-14. ⟨10.1186/1471-2229-8-66⟩ Article dans une revue inria-00329169v1
CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform Séverine Gagnot,Jean-Philippe Tamby,Marie-Laure Magniette,Frederique Bitton,Ludivine Taconnatet al. Nucleic Acids Research, 2008, 36, pp.D986-D990. ⟨10.1093/nar/gkm757⟩ Article dans une revue hal-01203869v1
UTILLdb, a Pisum sativum in silico forward and reverse genetics tool Marion M. Dalmais,Julien Schmidt,Christine Le Signor,Francoise Moussy,Judith Burstinet al. Genome Biology, 2008, 9 (2), R43, 12p. ⟨10.1186/gb-2008-9-2-r43⟩ Article dans une revue hal-02666957v1
Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome Sebastien S. Aubourg,Marie-Laure Martin-Magniette,Veronique V. Brunaud,Ludivine Taconnat,Frederique Bittonet al. BMC Genomics, 2007, 8 (401), pp.1-9. ⟨10.1186/1471-2164-8-401⟩ Article dans une revue hal-02668276v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. S. Aubourg,V. Brunaud,C. Bruyere,M. Cock,R. Cookeet al. Nucleic Acids Research, 2005, 33, pp.D641-D646 Article dans une revue hal-00313737v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts Sebastien Aubourg,Veronique Brunaud,Clémence Bruyère,J. Mark Cock,Richard Cookeet al. Nucleic Acids Research, 2005, 33, pp.D641-D646. ⟨10.1093/nar/gki115⟩ Article dans une revue hal-01189162v1
DEAD-box RNA helicases in Arabidopsis thaliana: establishing a link between quantitative expression, gene structure and evolution of a family of genes A. Mingam,Claire Toffano-Nioche,Véronique Brunaud,Nathalie Boudet,M. Kreiset al. Plant Biotechnology Journal, 2004, 2 (5), pp.401-405. ⟨10.1111/j.1467-7652.2004.00084.x⟩ Article dans une revue istex hal-02682507v1
FLAGdb++: a database for the functional analysis of the Arabidopsis genome Franck Samson,Véronique Brunaud,S. Duchêne,Y. de Oliveira,Michel M. Cabocheet al. Nucleic Acids Research, 2004, 32 (1), pp.347-350. ⟨10.1093/nar/gkh134⟩ Article dans une revue hal-02682811v1
FLAGdb/FST: a database of mapped flanking insersion sites (FSTs) of Arabidopsis thaliana T-DNA transformants Franck Samson,Véronique Brunaud,Sandrine Balzergue,Bertrand B. Dubreucq,Loic L. Lepiniecet al. Nucleic Acids Research, 2002, 30 (1), pp.94-97 Article dans une revue hal-02678939v1
T-DNA integration into Arabidopsis genome depends on sequences of pre-insertion sites Véronique Brunaud,Sandrine Balzergue,Bertrand B. Dubreucq,Sebastien Aubourg,Franck Samsonet al. EMBO Reports, 2002, 3 (12), pp.1152-1157. ⟨10.1093/embo-reports/kvf237⟩ Article dans une revue hal-02682810v1
Improved PCR-walking for large-scale isolation of plant T-DNA borders Sandrine Balzergue,Bertrand B. Dubreucq,Sylvie Chauvin,I. Le-Clainche,F. Le Boulaireet al. Biotechniques, 2001, 30 (3), 3 p Article dans une revue hal-02670631v1
Normes et standards dans le processus de traitement du document numérique en biologie moléculaire Gabriel Gallezot,Franck Samson,Véronique Brunaud,Shahinaz Gas,Philippe Bessières Solaris Information Communication, 2000, 6 Article dans une revue sic_00000055v2
Orientation specificity of the Lactococcus lactis Chi site Meriem El Karoui,M. Schaeffer,Veronique Biaudet,A. Bolotin,A. Sorokinet al. Genes to Cells, 2000, 5, pp.453-461 Article dans une revue hal-02690978v1
Characteristics of Chi distribution on different bacterial genomes Meriem El Karoui,Veronique Biaudet,Sophie Schbath,Alexandra A. Gruss Research in Microbiology, 1999, 150, pp.579-587 Article dans une revue hal-02697692v1
A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis Frédéric Chédin,Philippe Noirot,Veronique Biaudet,S.D. Ehrlich Molecular Microbiology, 1998, 29 (6), pp.1369-1377 Article dans une revue hal-02684405v1
Analysis of the Bacillus subtilis genome sequence reveals nine new T-box leaders Alain Chopin,Veronique Biaudet,S.D. Ehrlich Molecular Microbiology, 1998, 29, pp.662-664 Article dans une revue hal-02689739v1
Codon usage can explain GT-rich islands surrounding Chi sites on the Escherichia coli genome Veronique Biaudet,Meriem El Karoui,Alexandra A. Gruss Molecular Microbiology, 1998, 29, pp.666-668 Article dans une revue hal-02684952v1
Shiga-like toxin I is a polynucleotide: adenosine glycosidase Alain Chopin,Veronique Biaudet,S.D. Ehrlich Molecular Microbiology, 1998, 29 (2), pp.661-664 Article dans une revue hal-02692246v1
Identification of the Chi site of Haemophilus influenzae as several sequences related to the Escherichia coli Chi site Sophie Sourice,Veronique Biaudet,Meriem El Karoui,S.D. Ehrlich,Alexandra A. Gruss Molecular Microbiology, 1998, 27 (5), pp.1021-1029 Article dans une revue hal-02691790v1
Computerized genetic map of Bacillus subtilis Veronique Biaudet,Franck Samson,C. Anagnostopoulos,S.D. Ehrlich,Philippe Bessières Microbiology, 1996, 142, pp.2669-2729 Article dans une revue hal-02684956v1

Communication dans un congrès (18)

Plant-PLMview: a web-tool and in silico method for identifying cis-regulatory elements in gene-proximal regions of plants Julien Rozière,Franck Samson,Cécile Guichard,Margot Correa,Sylvie Coursolet al. Journées ouvertes en biologie, informatique et mathématiques (JOBIM), SFBI, Jul 2025, Bordeaux, France Communication dans un congrès hal-05163963v1
Revisiting the functional features of maize dispensable genes Johann Joets.,Maud Fagny,Kevin Baudry,Maëla Mollion,Olivier Turcet al. PAG32, Jan 2025, San Diego (CA), United States Communication dans un congrès hal-05366305v1
Detection of preferentially located DNA motifs reveals distinct cis-regulatory sequences in gene-proximal regions of Arabidopsis thaliana and maize Julien Rozière,Franck Samson,Cécile Guichard,Margot Correa,Véronique Brunaudet al. 65th Annual Maize Genetics Meeting, Maize Genetics Cooperation, Inc, Mar 2023, Saint-Louis (M0), United States Communication dans un congrès hal-05161597v1
A MAP OF GENE-PROXIMAL CIS-REGULATORY SEQUENCES IN THE ARABIDOPSIS AND MAIZE GENOMES Julien Rozière,Cécile Guichard,Véronique Brunaud,Marie-Laure Martin,Sylvie Coursol 13th International Conference of the French Society of Plant Biology, Christian Dubos, Aug 2022, Montpellier (Centre Agropolis), France Communication dans un congrès hal-05161601v1
PLMdetect : de novo mapping of functional cis-regulatory motifs in 5'-and 3'proximal regions from Arabidopsis and maize Julien Rozière,Véronique Brunaud,Sylvie Coursol,Marie-Laure Martin-Magniette Journées ouvertes en biologie, informatique et mathématiques (JOBIM), SFBI, Jul 2021, Virtual conference, France Communication dans un congrès hal-05161613v1
Characteristic of the Endosperm Adjacent to the Embryo Scutellum (EAS) of Maize Nicolas Doll,Yannick Fierlej,Jérémy Just,Veronique Brunaud,José Caiuset al. 4th European Maize Meeting, Sep 2021, Regensburg, Germany Communication dans un congrès hal-03354711v1
Genome-wide hypermethylation of TEs following low temperature exposure in maize Zeineb Achour,Johann Joets,Martine Leguilloux,Hélène Sellier,Jean-Philippe Pichonet al. Plant and Animal Genomes XXVII, Jan 2019, San Diego (California), United States Communication dans un congrès hal-04353481v1
Plant nitrogen supply affects Arabidopsis thaliana susceptibility to Botrytis cinerea and reveals novel virulence functions Marie-Christine Soulie,Antoine Davière,Veronique Brunaud,Ludivine Soubigou-Taconnat,Mathilde Fagard 18th Congress of International-Society-for-Molecular-Plant-Microbe-Interactions (IS-MPMI), International Society for Molecular Plant-Microbe Interactions, Jul 2019, Glasgow, United Kingdom. pp.49-49 Communication dans un congrès hal-02612362v1
Genome-wide hypermethylation of TEs and centromeres following low temperature exposure in maize. Zeineb Achour,Johann Joets,Martine Leguilloux,Hélène Sellier,Jean-Philippe Pichonet al. Epiplant II, Feb 2019, Strasbourg (FRANCE), France Communication dans un congrès hal-04478905v1
PLMdetect: a bioinformatic approach to identify cis-regulatory motifs in promoters of Plant genomes. Julien Rozière,Cecile C. Guichard,Margot Correa,Sylvie Coursol,Marie-Laure Martin-Magnietteet al. 2nd International Conference on Plant & Molecular Biology, Oct 2019, Amsterdam, Netherlands Communication dans un congrès hal-02955246v1
Low temperature triggers genome-wide hypermethylation in maize, with specific targeting of TEs and centromeres Zeineb Achour,Johann Joets,Martine Leguilloux,Hélène Sellier,Jean-Philippe Pichonet al. Réunion annuelle du GDR MobiLET, Dec 2018, Paris, France Communication dans un congrès hal-04478910v1
Découverte de variants (SNPs) et génotypage à partir de données RNA-seq chez le peuplier noir Odile Rogier,Souhila Amanzougarene,Marie-Claude Lesage Descauses,Sandrine Balzergue,Veronique Brunaudet al. Colloque EPGV 2016 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Oct 2016, Angers, France Communication dans un congrès hal-01603542v1
Diversity and Evolution of the Molecular Mechanisms Involved in Nickel Hyperaccumulation in Plants Sylvain Merlot,Vanesa Sanchez Garcia de La Torre,Bruno Fogliani,Louis-Charles Brinon,Valérie Burtet-Sarramegnaet al. 13th SGA Biennial Meeting on Mineral Resources in a Sustainable World, Centre National de la Recherche Scientifique (CNRS). Nancy, FRA., Aug 2015, Nancy, France. pp.3 Communication dans un congrès hal-02741948v1
Toward a characterization of the pepper host resistance effect on the gene expression of the pathogenic &lt;em&gt;Phytophthora capsici&lt;/em&gt; Gaëtan Maillot,Anne Massire,Jean-Paul Bouchet,Véronique Brunaud,Marie-Laure Martin-Magnietteet al. 12. Solanaceae Conference, Oct 2015, Bordeaux, France Communication dans un congrès hal-02795452v1
From gene expression modeling to gene network to investigate Arabidopsis thaliana genes involved in stress response Rim Zaag,Jean-Philippe Tamby,Cécile Guichard,Zakia Tariq,Sébastien Aubourget al. The 26th international conference on Arabidopsis research (ICAR2015), Jul 2015, Paris, France Communication dans un congrès hal-04671451v1
RNA-Seq study of host resistance and isolate aggressiveness on gene expression in [i]Phytophthora capsici[/i] Gaëtan Maillot,Anne Massire,Jean-Paul Bouchet,Veronique Brunaud,Marie-Laure Magnietteet al. 8. Effectome Meeting, Sep 2015, Lauret, France Communication dans un congrès hal-01210021v1
Physical mapping and re-sequencing of a set of resistance related genes in grapevine Marco Moroldo,Sophie Paillard,R. Marconi,Fabrice Legeai,Aurelie Canaguieret al. 17. Conference Plant and Animal Genomes, Labo/service de l'auteur, Ville service, Pays service., Jan 2009, San Diego, United States. 1 p Communication dans un congrès hal-01462667v1
Genomic ressources for pea Marion M. Dalmais,Julien Schmidt,Christine Le Signor,Francoise Moussy,Judith Burstinet al. 6. European Conference on Grain Legumes "Integrating legume biology for sustainable agriculture", Nov 2007, Lisbon, Portugal. 199 p Communication dans un congrès hal-02754438v1

Poster de conférence (19)

How does Dryopteris erythrosora accumulate Rare Earth Elements? Nicolas Grosjean,Sylvain Merlot,Véronique Brunaud,Ludivine Soubignou-Taconnat,Sebastien Thomineet al. PlantMetals Conference - Trace Metal Metabolism in Plants, Sep 2025, Ceske Budejovice, Czech Republic Poster de conférence hal-05373344v1
A combination of quantitative trait locus mapping and transcriptome analysis reveals a cluster of three MYC2-and jasmonic acid-dependent genes associated with long-term chilling tolerance in maize Catalina Duran Garzon,Claire Chemin,Andrea Rau,Benoît Decaux,Hélène Sellier-Richardet al. 65th Annual Maize Genetics Meeting, Mar 2023, Saint-Louis (Missouri), United States. , 2023 Poster de conférence hal-05161618v1
Impact de la résistance partielle du piment sur l'expression des gènes de Phytophthora capsici : conséquences pour la création variétale Véronique Lefebvre,Anne Massire,Gaëtan Maillot,Emmanuel Szadkowski,Bernard Caromelet al. 13e Rencontres de Phytopathologie - Mycologie, Journées Jean Chevaugeon, Sep 2022, Aussois (France), France Poster de conférence hal-04133322v1
Transcriptome analysis reveals putative target genes of APETALA3-3 during early floral development in Nigella damascena L. Yves Deveaux,Natalia Conde e Silva,Martine Le Guilloux,Harry Belcram,Etienne Delannoyet al. Workshop on Molecular Mechanisms Controlling Flower Development, May 2022, Alicante (SPAIN), Spain Poster de conférence hal-04336815v1
A comprehensive map of preferentially located motifs reveals novel proximal cis-regulatory elements in plants Julien Rozière,Cécile Guichard,Véronique Brunaud,Marie-Laure Martin,Sylvie Coursol Journées ouvertes en biologie, informatique et mathématiques (JOBIM), Jul 2022, Rennes, France. , 2022 Poster de conférence hal-05161617v1
Genome-wide de novo analysis of preferentially located motifs in 5' and 3'-proximal regions from arabidopsis and maize Julien Rozière,Véronique Brunaud,Sylvie Coursol,Marie-Laure Martin- Magniette 63rd Annual Maize Genetics Meeting, Mar 2021, Virtual Conférence, United States. , 2021 Poster de conférence hal-05161604v1
Genome-wide de novo analysis of preferentially located motifs in 5’ and 3’-proximal regions from Arabidopsis and maize Julien Rozière,Véronique Brunaud,Sylvie Coursol,Marie-Laure Magniette Martin-Magniette International Plant Systems Biology 2021, Apr 2021, Virtual conference, Germany. 2021 Poster de conférence hal-05161611v1
Genome-wide hypermethylation of TEs and centromeres following low temperature exposure in B73 Zeineb Achour,Johann Joets,Martine Leguilloux,Hélène Sellier,Jean-Philippe Pichonet al. 61st Annual Maize Genetics Conference, Mar 2019, Saint Louis (Missouri), United States Poster de conférence hal-04353514v1
Transcriptome analysis of a chilling tolerance strategy in European maize dent germplasm. Catalina Durand Garzon,Hélène Sellier-Richard,Jan Drouaud,Ludivine Soubigou-Taconnat,Veronique Brunaudet al. XXIVth EUCARPIA Maize and Sorghum Conference. Integrating quantitative and molecular genetics to develop new breeding methods in maize and sorghum., Oct 2019, Freising, Germany Poster de conférence hal-02955226v1
Deciphering molecular origin and functional impact of structural variation in maize through genome sequences comparison and integrative analysis of genetic variation, transcriptome and phenotype data Johann J. Joets,Sylvie Coursol,Olivier Turc,Llorenç Cabrera-Bosquet,Marie-Laure Magniette Martin-Magnietteet al. First International Plant Systems Biology meeting, Sep 2018, Roscoff, France Poster de conférence hal-02955192v1
Deciphering molecular origin and functional impact of structural variation in maize through genome sequences comparison and integrative analysis of genetic variation, transcriptome and phenotype data Johann Joets,Sylvie Coursol,Olivier Turc,Llorenç Cabrera Bosquet,Marie-Laure Martin-Magnietteet al. 60th Annual Maize Genetics Conference, Mar 2018, Saint-Malo, France. , 2018 Poster de conférence hal-02738241v1
SNP discovery and validation from RNA-seq data in black poplar Odile Rogier,Souhila Amanzougarene,Marie-Claude Lesage Descauses,Sandrine Balzergue,Véronique Brunaudet al. Journées ouvertes en biologie, informatique et mathématiques (JOBIM), Jul 2017, Lille, France. 2017, JOBIM 2017 Journées Ouvertes Biologie Informatique Mathématiques. Actes Poster de conférence hal-02737565v1
Prediction of black poplar biofuel production: disentangling omnigenics with transcriptomics Aurélien Chateigner,Odile Rogier,Véronique Jorge,Jean-Charles Leplé,Veronique Brunaudet al. Detecting the Genomic Signal of Polygenic Adaptation and the Role of Epistasis in Evolution, Aug 2017, Zurich, Switzerland. , 45 p., 2017, Symposium: Detecting the Genomic Signal of Polygenic Adaptation and the Role of Epistasis in Evolution Poster de conférence hal-01607166v1
Nucleotide diversity of Populus nigra transcriptomes Odile Rogier,Souhila Amanzougarene,Marie-Claude Lesage Descauses,Sandrine Balzergue,Veronique Brunaudet al. IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. 2016, IUFRO Genomics and Forest Tree Genetics. Book of Abstracts Poster de conférence hal-01456005v1
A systems biology approach for identifying candidate genes involved in the natural variability of biomass yield and chemical properties in black poplar Vincent Segura,Marie-Claude Lesage Descauses,Jean-Paul Charpentier,Kévin Kinkel,Claire Mandinet al. IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. , 2016, IUFRO Genomics and Forest Tree Genetics. Book of Abstract Poster de conférence hal-01456004v1
Transcriptomic regulation in pepper during the interaction with &lt;em&gt;Phytophthora capsici&lt;/em&gt; Gaëtan Maillot,Emmanuel Szadkowski,Anne Massire,Jean-Paul Bouchet,Veronique Brunaudet al. 16. Eucarpia Capsicum and Eggplant Meeting, Sep 2016, Kecskemét, Hungary. 2016 Poster de conférence hal-02799453v1
Transcriptomic regulation in pepper during the interaction with Phytophthora capsici. Gaëtan Maillot,Emmanuel Szadkowski,Anne Massire,Jean-Paul Bouchet,Veronique Brunaudet al. 16th Eucarpia Capsicum and Eggplant Meeting, Sep 2016, Kecskemét, Hungary Poster de conférence hal-03551784v1
CORGI : Co-regulated gene investigator. Sandra Pelletier,Sylvain Gaillard,Sebastien Aubourg,Martin-Magniette Marie-Laure,Veronique Brunaudet al. Journées Ouvertes Biologie Informatique et Mathématiques (JOBIM’2016), Jun 2016, Lyon, France Poster de conférence hal-03104271v1
CATMA: a new resource for transcription profiling in Arabidopsis thaliana Frédérique Bitton,Ludivine Taconnat,K. Boivin,Séverine Gagnot,Veronique Brunaudet al. 2001, 2001 Poster de conférence hal-02826453v1

Proceedings/Recueil des communications (1)

Pea TILLING platform Marion M. Dalmais,Julien Schmidt,Christine Le Signor,Francoise Moussy,Judith Burstinet al. 6. European Conference on Grain Legumes "Integrating legume biology for sustainable agriculture", Nov 2007, Lisbon, Portugal. European Conference on Grain Legumes, 199 p., 2007 Proceedings/Recueil des communications hal-02822350v1

Chapitre d'ouvrage (5)

Bioinformatic analysis of chloroplast gene expression and RNA posttranscriptional maturations using RNA Sequencing Bastien Malbert,Guillem Rigaill,Véronique Brunaud,Claire Lurin,Etienne Delannoy Plastids, 1829, Humana Press Inc., pp.16, 2018, Methods in Molecular Biology, 978-1-4939-8654-5; 978-1-4939-8653-8. ⟨10.1007/978-1-4939-8654-5_19⟩ Chapitre d'ouvrage hal-02788517v1
FLAGdb(++): A Bioinformatic Environment to Study and Compare Plant Genomes Jean-Philippe Tamby,Véronique Brunaud Plant Genomics Databases, 1533, SPRINGER, pp.23, 2017, Methods in Molecular Biology, 978-1-4939-6658-5; 978-1-4939-6656-1. ⟨10.1007/978-1-4939-6658-5_4⟩ Chapitre d'ouvrage hal-02790413v1
Micado, an integrative database for systematic functional analysis of &lt;em&gt;Bacillus subtilis&lt;/em&gt; and microbial genomics Etienne Dervyn,Franck Samson,Véronique Brunaud,S. Dusko Ehrlich,Philippe Bessiereset al. Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1 Chapitre d'ouvrage hal-02828496v1
List of &lt;em&gt;Bacillus subtilis&lt;/em&gt; unknown genes with a phenotype determined by the functional analysis project Etienne Dervyn,Véronique Brunaud,Franck Samson,Shahinaz Gas,Gabriel Gallezotet al. Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1 Chapitre d'ouvrage hal-02828656v1
Phenotype responses and reporter gene activity from the systematic functional analysis of &lt;em&gt;Bacillus subtilis&lt;/em&gt; unknown genes Etienne Dervyn,Véronique Brunaud,Franck Samson,Shahinaz Gas,Gabriel Gallezotet al. Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1 Chapitre d'ouvrage hal-02829100v1

Pré-publication, Document de travail (4)

Apical and basal auxin sources pattern shoot branching in a moss Mattias Thelander,Katarina Landberg,Arthur Muller,Gladys Cloarec,Nik Cunniffeet al. 2022 Pré-publication, Document de travail hal-03515264v1
Hypomethylated poplars show higher tolerance to water deficit and highlight a dual role for DNA methylation in shoot meristem: regulation of stress response and genome integrity M.D. D Sow,A-L Le Gac,Régis Fichot,S. Lanciano,A. Delaunayet al. 2021 Pré-publication, Document de travail hal-03239719v1
Low temperature triggers genome-wide hypermethylation of transposable elements and centromeres in maize Zeineb Achour,Johann Joets,Martine Leguilloux,Hélène Sellier,Jean-Philippe Pichonet al. 2023 Pré-publication, Document de travail hal-04305927v1
The relationship between gene co-expression network connectivity and phenotypic prediction sheds light at the core of the omnigenic theory Aurélien Chateigner,Marie-Claude Lesage Descauses,Odile Rogier,Véronique Jorge,Jean-Charles Lepléet al. 2019 Pré-publication, Document de travail (preprint/prepublication) hal-02788812v1