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Paraburkholderia phytofirmans PsJN delays Botrytis cinerea development on grapevine inflorescences

Lidiane Carla Miotto Vilanova , Marine Rondeau , Mathilde Robineau , Jean François Guise , Céline Lavire
Frontiers in Microbiology, 2022, 13, pp.1030982. ⟨10.3389/fmicb.2022.1030982⟩
Journal articles hal-03920709v1

Evolutionary classification of tumor- and root-inducing plasmids based on T-DNAs and virulence regions

Nesrine Nabi , Ahmed Ben Hafsa , Vincent Gaillard , Xavier Nesme , Maher Chaouachi
Molecular Phylogenetics and Evolution, 2022, 169, pp.107388. ⟨10.1016/j.ympev.2022.107388⟩
Journal articles hal-03579604v1
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Biological Control of Grapevine Crown Gall Disease, Caused by Allorhizobium vitis , Using Paraburkholderia phytofirmans PsJN

Nguyen-Huu Trong , Jeanne Doré , Matthieu Gaucher , Cédric Jacquard , Nicolas Richet
PhytoFrontiers™, 2022, pp.03-22-0018-R. ⟨10.1094/phytofr-03-22-0018-r⟩
Journal articles hal-03889663v1

Agrobacterium fabrum C58 involved nitrate reductase NapA and antisense RNA NorR to denitrify

Solène Lecomte , Xavier Nesme , Théophile Franzino , Camille Villard , Mariane Pivard
FEMS Microbiology Ecology, 2021, 97 (1), ⟨10.1093/femsec/fiaa233⟩
Journal articles hal-03238010v1
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Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov.

Nitin Singh , Céline Lavire , Joseph Nesme , Ludovic Vial , Xavier Nesme
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.765943⟩
Journal articles hal-03515260v1
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Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum

Armelle Vigouroux , Thibault Meyer , Anaïs Naretto , Pierre Legrand , Magali Aumont-Nicaise
Nucleic Acids Research, 2021, 49 (1), pp.529-546. ⟨10.1093/nar/gkaa1181⟩
Journal articles hal-03367389v1
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Development and validation of a UHPLC-ESI-QTOF mass spectrometry method to analyze opines, plant biomarkers of crown gall or hairy root diseases

Rosa Padilla , Vincent Gaillard , Thao Nhi Le , Floriant Bellvert , David Chapulliot
Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2021, 1162, pp.122458. ⟨10.1016/j.jchromb.2020.122458⟩
Journal articles hal-03238014v1

Development of a DNA based real time PCR assay to quantify Allorhizobium vitis over time in grapevine ( Vitis vinifera L.) plantlets

Trong Huu Nguyen , Jeanne Doré , Essaid Ait Barka , Céline Lavire , Christophe Clement
Plant Disease, 2021, 105 (2), pp.384-391. ⟨10.1094/PDIS-04-20-0732-RE⟩
Journal articles hal-02955818v1

Plasmid‐chromosome crosstalks

Ludovic Vial , Florence Hommais
Environmental Microbiology, 2020, 22 (2), pp.540-556. ⟨10.1111/1462-2920.14880⟩
Journal articles hal-02389634v1

Characterization and phylogenetic diversity of Allorhizobium vitis isolated from grapevine in Morocco

K. Habbadi , Q. Duplay , D. Chapulliot , Isabelle Kerzaon , R. Benkirane
Journal of Applied Microbiology, 2020, 128 (3), pp.828-839. ⟨10.1111/jam.14523⟩
Journal articles hal-02473998v1

Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches

Armelle Vigouroux , Jeanne Doré , Loic Marty , Magali Aumont-Nicaise , Pierre Legrand
Biochemical Journal, 2020, 477 (3), pp.615-628. ⟨10.1042/BCJ20190886⟩
Journal articles hal-02445468v1

Biofilm constructing variants of Paraburkholderia phytofirmans PsJN outcompete the wild-type form in free-living and static conditions but not in planta

Marine Rondeau , Qassim Esmaeel , Jérôme Crouzet , Pauline Blin , Isabelle Gosselin
Applied and Environmental Microbiology, 2019, 85 (11), pp.UNSP e02670--18. ⟨10.1128/AEM.02670-18⟩
Journal articles hal-02173766v1

A novel plasmid‐transcribed regulatory sRNA, QfsR, controls chromosomal polycistronic gene expression in Agrobacterium fabrum

Benjamin Diel , Magali Dequivre , Florence Wisniewski-Dyé , Ludovic Vial , Florence Hommais
Environmental Microbiology, 2019, 21 (8), pp.3063-3075. ⟨10.1111/1462-2920.14704⟩
Journal articles hal-02161890v1
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Ecological Conditions and Molecular Determinants Involved in Agrobacterium Lifestyle in Tumors

Thibault Meyer , Clémence Thiour-Mauprivez , Florence Wisniewski-Dyé , Isabelle Kerzaon , Gilles Comte
Frontiers in Plant Science, 2019, 10, pp.978. ⟨10.3389/fpls.2019.00978⟩
Journal articles hal-02473987v1

Regulation of hydroxycinnamic acid degradation drives Agrobacterium fabrum lifestyles.

Thibault Meyer , Sébastien Renoud , Armelle Vigouroux , Aurélie Miomandre , Vincent Gaillard
Molecular Plant-Microbe Interactions, 2018, 31 (8), pp.814--822. ⟨10.1094/MPMI-10-17-0236-R⟩
Journal articles hal-02182326v1
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The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogen Agrobacterium fabrum

Thibault Meyer , Armelle Vigouroux , Magali Aumont-Nicaise , Gilles Comte , Ludovic Vial
Journal of Biological Chemistry, 2018, 293 (21), pp.7930--7941. ⟨10.1074/jbc.RA118.001856⟩
Journal articles hal-02182313v1
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Interplay between 4-Hydroxy-3-Methyl-2-Alkylquinoline and N-Acyl-Homoserine Lactone Signaling in a Burkholderia cepacia Complex Clinical Strain.

Annelise Chapalain , Marie-Christine Groleau , Servane Le Guillouzer , Aurélie Miomandre , Ludovic Vial
Frontiers in Microbiology, 2017, 8, pp.1021. ⟨10.3389/fmicb.2017.01021⟩
Journal articles pasteur-01574572v1
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A simple and stable method of tagging Agrobacterium fabrum C58 for environmental monitoring

Meriam Bouri , Haifa Ben Gharsa , Ludovic Vial , Céline Lavire , Bernard R. Glick
Phytopathologia Mediterranea, 2017, 56 (1), pp.1-9. ⟨10.14601/Phytopathol_Mediterr-18072⟩
Journal articles hal-01608481v1
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Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

Florent Lassalle , Rémi Planel , Simon Penel , David Chapulliot , Valérie Barbe
Genome Biology and Evolution, 2017, 9 (12), pp.3413 - 3431. ⟨10.1093/gbe/evx255⟩
Journal articles hal-01913841v1

Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis

Khaoula Habbadi , Thibault Meyer , Ludovic Vial , Vincent Gaillard , R. Benkirane
Environmental Science and Pollution Research, 2017, pp.1-10. ⟨10.1007/s11356-017-1008--⟩
Journal articles hal-02487195v1

Coordinated Regulation of Species-Specific Hydroxycinnamic Acid Degradation and Siderophore Biosynthesis Pathways in Agrobacterium fabrum

Jessica Baude , Ludovic Vial , Camille Villard , Tony Campillo , Céline Lavire
Applied and Environmental Microbiology, 2016, 82 (12), pp.3515-3524. ⟨10.1128/aem.00419-16⟩
Journal articles hal-01910930v1

Small RNA deep-sequencing analyses reveal a new regulator of virulence in Agrobacterium fabrum C58

Magali Dequivre , Benjamin Diel , Camille Villard , Odile Sismeiro , Maxime Durot
Molecular Plant-Microbe Interactions, 2015, 28 (5), pp.580-589. ⟨10.1094/MPMI-12-14-0380-FI⟩
Journal articles hal-01205620v1

Phylogeny of the Rhizobium-Allorhizobium-Agrobacterium clade supports the delineation of Neorhizobium gen. nov.

Seyed Abdollah Mousavi , Niklas Wahlberg , Xavier Nesme , Céline Lavire , Ludovic Vial
Systematic and Applied Microbiology, 2014, 37 (3), pp.208-215. ⟨10.1016/j.syapm.2013.12.007⟩
Journal articles hal-01010652v1

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid

Martha H. Ramírez-Bahena , Ludovic Vial , Florent Lassalle , Benjamin Diel , David Chapulliot
Molecular Phylogenetics and Evolution, 2014, 73, pp.202-207. ⟨10.1016/j.ympev.2014.01.005⟩
Journal articles hal-01010660v1

Analysis of hydroxycinnamic acids degradation in Agrobacterium fabrum reveals a CoA-dependent, beta-oxidative deacetylation pathway

Tony Campillo , Sébastien Renoud , Isabelle Kerzaon , Ludovic Vial , Jessica Baude
Applied and Environmental Microbiology, 2014, 80 (11), pp.3341-3349. ⟨10.1128/AEM.00475-14⟩
Journal articles hal-01010603v1

Review of the sylvatic cycle of African swine fever in sub-Saharan Africa and the Indian ocean

F. Jori , Ludovic Vial , M. L. Penrith , R. Pérez-Sánchez , E. Etter
Virus Research, 2013, 173 (1), pp.212 - 227. ⟨10.1016/j.virusres.2012.10.005⟩
Journal articles hal-02650164v1

Identification of quorum sensing-controlled genes in Burkholderia ambifaria.

Annelise Chapalain , Ludovic Vial , Natacha Laprade , Valérie Dekimpe , Jonathan Perreault
MicrobiologyOpen, 2013, 2 (2), pp.226-42. ⟨10.1002/mbo3.67⟩
Journal articles pasteur-01130811v1
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Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens

Florent Lassalle , Tony Campillo , Ludovic Vial , Jessica Baude , Denis Costechareyre
Genome Biology and Evolution, 2011, 3 (3), pp.762-781. ⟨10.1093/gbe/evr070⟩
Journal articles halsde-00723400v1

The various lifestyles of the Burkholderia cepacia complex species: a tribute to adaptation.

Ludovic Vial , Annelise Chapalain , Marie-Christine Groleau , Eric Déziel
Environmental Microbiology, 2011, 13 (1), pp.1-12. ⟨10.1111/j.1462-2920.2010.02343.x⟩
Journal articles pasteur-00722215v1
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Drosophila melanogaster as a model host for the Burkholderia cepacia complex.

Josée Castonguay-Vanier , Ludovic Vial , Julien Tremblay , Eric Déziel
PLoS ONE, 2010, 5 (7), pp.e11467. ⟨10.1371/journal.pone.0011467⟩
Journal articles pasteur-00547901v1

Phase variation has a role in Burkholderia ambifaria niche adaptation.

Ludovic Vial , Marie-Christine Groleau , Martin G Lamarche , Geneviève Filion , Josée Castonguay-Vanier
ISME Journal, 2010, 4 (1), pp.49-60. ⟨10.1038/ismej.2009.95⟩
Journal articles pasteur-00819527v1

Physical organizationand phylogenetic analysis of acdRas leucineresponsive regulatorof the1-aminocyclopropane-1-carboxylate deaminase gene acdSin phytobene¢cial Azospirillum lipoferum4B and other Proteobacteria

Claire Prigent-Combaret , Didier Blaha , Joel F. Pothier , Ludovic Vial , Marie-Andrée Poirier
FEMS Microbiology Ecology, 2008, 65, pp.202-219. ⟨10.1111/j.1574-6941.2008.00474.x⟩
Journal articles halsde-00344095v1

Phase and antigenic variation mediated by genome modifications

Florence Wisniewski-Dyé , Ludovic Vial
Antonie van Leeuwenhoek, 2008, 94, pp.493-515. ⟨10.1007/s10482-008-9267-6⟩
Journal articles halsde-00344103v1

N-acyl-homoserine lactone-mediated quorum-sensing in Azospirillum: an exception rather than a rule.

Ludovic Vial , Caroline Cuny , Katia Gluchoff-Fiasson , Gilles Comte , Phil M. Oger
FEMS Microbiology Ecology, 2006, 58, pp.155-168. ⟨10.1111/j.1574-6941.2006.00153.x⟩
Journal articles hal-00119123v1

Phase Variation and Genomic Architecture Changes in Azospirillum

Ludovic Vial , Céline Lavire , Patrick Mavingui , Didier Blaha , Jacqueline Haurat
Journal of Bacteriology, 2006, 188 (15), pp.5364-5373
Journal articles hal-00112563v1

Construction of a recA mutant of Azospirillum lipoferum and involvement of recA in phase variation

Ludovic Vial , Joël Pothier , Philippe Normand , Yvan Moënne-Loccoz , René Bally
FEMS Microbiology Letters, 2004, 236 (2), pp.291-299. ⟨10.1111/j.1574-6968.2004.tb09660.x⟩
Journal articles hal-02569682v1