ludovic vial

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A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity

Solange Moréra , Armelle Vigouroux , Magali Aumont-Nicaise , Mohammed Ahmar , Thibault Meyer et al.
Biochemical Journal, In press, 481 (2), pp.93-117. ⟨10.1042/BCJ20230273⟩
Article dans une revue hal-04397563 v1
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Paraburkholderia phytofirmans PsJN delays Botrytis cinerea development on grapevine inflorescences

Lidiane Carla Miotto Vilanova , Marine Rondeau , Mathilde Robineau , Jean François Guise , Céline Lavire et al.
Frontiers in Microbiology, 2022, 13, pp.1030982. ⟨10.3389/fmicb.2022.1030982⟩
Article dans une revue hal-03920709 v1
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Biological Control of Grapevine Crown Gall Disease, Caused by Allorhizobium vitis , Using Paraburkholderia phytofirmans PsJN

Nguyen-Huu Trong , Jeanne Doré , Matthieu Gaucher , Cédric Jacquard , Nicolas Richet et al.
PhytoFrontiers™, 2022, 2 (4), pp.391-403. ⟨10.1094/phytofr-03-22-0018-r⟩
Article dans une revue hal-03889663 v1

Evolutionary classification of tumor- and root-inducing plasmids based on T-DNAs and virulence regions

Nesrine Nabi , Ahmed Ben Hafsa , Vincent Gaillard , Xavier Nesme , Maher Chaouachi et al.
Molecular Phylogenetics and Evolution, 2022, 169, pp.107388. ⟨10.1016/j.ympev.2022.107388⟩
Article dans une revue hal-03579604 v1

Agrobacterium fabrum C58 involved nitrate reductase NapA and antisense RNA NorR to denitrify

Solène Lecomte , Xavier Nesme , Théophile Franzino , Camille Villard , Mariane Pivard et al.
FEMS Microbiology Ecology, 2021, 97 (1), ⟨10.1093/femsec/fiaa233⟩
Article dans une revue hal-03238010 v1
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Development and validation of a UHPLC-ESI-QTOF mass spectrometry method to analyze opines, plant biomarkers of crown gall or hairy root diseases

Rosa Padilla , Vincent Gaillard , Thao Nhi Le , Floriant Bellvert , David Chapulliot et al.
Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2021, 1162, pp.122458. ⟨10.1016/j.jchromb.2020.122458⟩
Article dans une revue hal-03238014 v1

Development of a DNA based real time PCR assay to quantify Allorhizobium vitis over time in grapevine ( Vitis vinifera L.) plantlets

Trong Huu Nguyen , Jeanne Doré , Essaid Ait Barka , Céline Lavire , Christophe Clement et al.
Plant Disease, 2021, 105 (2), pp.384-391. ⟨10.1094/PDIS-04-20-0732-RE⟩
Article dans une revue hal-02955818 v1
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Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov.

Nitin Singh , Céline Lavire , Joseph Nesme , Ludovic Vial , Xavier Nesme et al.
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.765943⟩
Article dans une revue hal-03515260 v1
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Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum

Armelle Vigouroux , Thibault Meyer , Anaïs Naretto , Pierre Legrand , Magali Aumont-Nicaise et al.
Nucleic Acids Research, 2021, 49 (1), pp.529-546. ⟨10.1093/nar/gkaa1181⟩
Article dans une revue hal-03367389 v1

Characterization and phylogenetic diversity of Allorhizobium vitis isolated from grapevine in Morocco

K. Habbadi , Q. Duplay , D. Chapulliot , Isabelle Kerzaon , R. Benkirane et al.
Journal of Applied Microbiology, 2020, 128 (3), pp.828-839. ⟨10.1111/jam.14523⟩
Article dans une revue hal-02473998 v1

Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches

Armelle Vigouroux , Jeanne Doré , Loic Marty , Magali Aumont-Nicaise , Pierre Legrand et al.
Biochemical Journal, 2020, 477 (3), pp.615-628. ⟨10.1042/BCJ20190886⟩
Article dans une revue hal-02445468 v1

Plasmid‐chromosome crosstalks

Ludovic Vial , Florence Hommais
Environmental Microbiology, 2020, 22 (2), pp.540-556. ⟨10.1111/1462-2920.14880⟩
Article dans une revue (article de synthèse) hal-02389634 v1

A novel plasmid‐transcribed regulatory sRNA, QfsR, controls chromosomal polycistronic gene expression in Agrobacterium fabrum

Benjamin Diel , Magali Dequivre , Florence Wisniewski-Dyé , Ludovic Vial , Florence Hommais
Environmental Microbiology, 2019, 21 (8), pp.3063-3075. ⟨10.1111/1462-2920.14704⟩
Article dans une revue hal-02161890 v1

Biofilm constructing variants of Paraburkholderia phytofirmans PsJN outcompete the wild-type form in free-living and static conditions but not in planta

Marine Rondeau , Qassim Esmaeel , Jérôme Crouzet , Pauline Blin , Isabelle Gosselin et al.
Applied and Environmental Microbiology, 2019, 85 (11), pp.UNSP e02670--18. ⟨10.1128/AEM.02670-18⟩
Article dans une revue hal-02173766 v1
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Ecological Conditions and Molecular Determinants Involved in Agrobacterium Lifestyle in Tumors

Thibault Meyer , Clémence Thiour-Mauprivez , Florence Wisniewski-Dyé , Isabelle Kerzaon , Gilles Comte et al.
Frontiers in Plant Science, 2019, 10, pp.978. ⟨10.3389/fpls.2019.00978⟩
Article dans une revue hal-02473987 v1

Regulation of hydroxycinnamic acid degradation drives Agrobacterium fabrum lifestyles.

Thibault Meyer , Sébastien Renoud , Armelle Vigouroux , Aurélie Miomandre , Vincent Gaillard et al.
Molecular Plant-Microbe Interactions, 2018, 31 (8), pp.814--822. ⟨10.1094/MPMI-10-17-0236-R⟩
Article dans une revue hal-02182326 v1
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The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogen Agrobacterium fabrum

Thibault Meyer , Armelle Vigouroux , Magali Aumont-Nicaise , Gilles Comte , Ludovic Vial et al.
Journal of Biological Chemistry, 2018, 293 (21), pp.7930--7941. ⟨10.1074/jbc.RA118.001856⟩
Article dans une revue hal-02182313 v1
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Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

Florent Lassalle , Rémi Planel , Simon Penel , David Chapulliot , Valérie Barbe et al.
Genome Biology and Evolution, 2017, 9 (12), pp.3413 - 3431. ⟨10.1093/gbe/evx255⟩
Article dans une revue hal-01913841 v1

Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis

Khaoula Habbadi , Thibault Meyer , Ludovic Vial , Vincent Gaillard , R. Benkirane et al.
Environmental Science and Pollution Research, 2017, pp.1-10. ⟨10.1007/s11356-017-1008--⟩
Article dans une revue hal-02487195 v1
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Interplay between 4-Hydroxy-3-Methyl-2-Alkylquinoline and N-Acyl-Homoserine Lactone Signaling in a Burkholderia cepacia Complex Clinical Strain.

Annelise Chapalain , Marie-Christine Groleau , Servane Le Guillouzer , Aurélie Miomandre , Ludovic Vial et al.
Frontiers in Microbiology, 2017, 8, pp.1021. ⟨10.3389/fmicb.2017.01021⟩
Article dans une revue pasteur-01574572 v1
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A simple and stable method of tagging Agrobacterium fabrum C58 for environmental monitoring

Meriam Bouri , Haifa Ben Gharsa , Ludovic Vial , Céline Lavire , Bernard R. Glick et al.
Phytopathologia Mediterranea, 2017, 56 (1), pp.1-9. ⟨10.14601/Phytopathol_Mediterr-18072⟩
Article dans une revue hal-01608481 v1

Coordinated Regulation of Species-Specific Hydroxycinnamic Acid Degradation and Siderophore Biosynthesis Pathways in Agrobacterium fabrum

Jessica Baude , Ludovic Vial , Camille Villard , Tony Campillo , Céline Lavire et al.
Applied and Environmental Microbiology, 2016, 82 (12), pp.3515-3524. ⟨10.1128/aem.00419-16⟩
Article dans une revue hal-01910930 v1

Small RNA deep-sequencing analyses reveal a new regulator of virulence in Agrobacterium fabrum C58

Magali Dequivre , Benjamin Diel , Camille Villard , Odile Sismeiro , Maxime Durot et al.
Molecular Plant-Microbe Interactions, 2015, 28 (5), pp.580-589. ⟨10.1094/MPMI-12-14-0380-FI⟩
Article dans une revue hal-01205620 v1

Phylogeny of the Rhizobium-Allorhizobium-Agrobacterium clade supports the delineation of Neorhizobium gen. nov.

Seyed Abdollah Mousavi , Niklas Wahlberg , Xavier Nesme , Céline Lavire , Ludovic Vial et al.
Systematic and Applied Microbiology, 2014, 37 (3), pp.208-215. ⟨10.1016/j.syapm.2013.12.007⟩
Article dans une revue hal-01010652 v1

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid

Martha H. Ramírez-Bahena , Ludovic Vial , Florent Lassalle , Benjamin Diel , David Chapulliot et al.
Molecular Phylogenetics and Evolution, 2014, 73, pp.202-207. ⟨10.1016/j.ympev.2014.01.005⟩
Article dans une revue hal-01010660 v1

Analysis of hydroxycinnamic acids degradation in Agrobacterium fabrum reveals a CoA-dependent, beta-oxidative deacetylation pathway

Tony Campillo , Sébastien Renoud , Isabelle Kerzaon , Ludovic Vial , Jessica Baude et al.
Applied and Environmental Microbiology, 2014, 80 (11), pp.3341-3349. ⟨10.1128/AEM.00475-14⟩
Article dans une revue hal-01010603 v1

Rapid and accurate species and genomic species identification and exhaustive population diversity assessment of Agrobacterium spp. using recA-based PCR

M. Shams , L. Vial , D. Chapulliot , X. Nesme , C. Lavire
Systematic and Applied Microbiology, 2013, 36 (5), pp.351-358. ⟨10.1016/j.syapm.2013.03.002⟩
Article dans une revue istex hal-02522222 v1

Review of the sylvatic cycle of African swine fever in sub-Saharan Africa and the Indian ocean

F. Jori , Ludovic Vial , M. L. Penrith , R. Pérez-Sánchez , E. Etter et al.
Virus Research, 2013, 173 (1), pp.212 - 227. ⟨10.1016/j.virusres.2012.10.005⟩
Article dans une revue istex hal-02650164 v1

Identification of quorum sensing-controlled genes in Burkholderia ambifaria.

Annelise Chapalain , Ludovic Vial , Natacha Laprade , Valérie Dekimpe , Jonathan Perreault et al.
MicrobiologyOpen, 2013, 2 (2), pp.226-42. ⟨10.1002/mbo3.67⟩
Article dans une revue pasteur-01130811 v1
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Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens

Florent Lassalle , Tony Campillo , Ludovic Vial , Jessica Baude , Denis Costechareyre et al.
Genome Biology and Evolution, 2011, 3 (3), pp.762-781. ⟨10.1093/gbe/evr070⟩
Article dans une revue halsde-00723400 v1

The various lifestyles of the Burkholderia cepacia complex species: a tribute to adaptation.

Ludovic Vial , Annelise Chapalain , Marie-Christine Groleau , Eric Déziel
Environmental Microbiology, 2011, 13 (1), pp.1-12. ⟨10.1111/j.1462-2920.2010.02343.x⟩
Article dans une revue pasteur-00722215 v1

Phase variation has a role in Burkholderia ambifaria niche adaptation.

Ludovic Vial , Marie-Christine Groleau , Martin G Lamarche , Geneviève Filion , Josée Castonguay-Vanier et al.
The International Society of Microbiologial Ecology Journal, 2010, 4 (1), pp.49-60. ⟨10.1038/ismej.2009.95⟩
Article dans une revue pasteur-00819527 v1
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Drosophila melanogaster as a model host for the Burkholderia cepacia complex.

Josée Castonguay-Vanier , Ludovic Vial , Julien Tremblay , Eric Déziel
PLoS ONE, 2010, 5 (7), pp.e11467. ⟨10.1371/journal.pone.0011467⟩
Article dans une revue pasteur-00547901 v1

Population sizes and dispersal pattern of tsetse flies: rolling on the river?

Jérémy Bouyer , Thomas Balenghien , S Ravel , L Vial , Issa Sidibé et al.
Molecular Ecology, 2009, 18, pp.2787-2797
Article dans une revue hal-02653763 v1

Physical organization and phylogenetic analysis of acdR as leucine-responsive regulator of the 1-aminocyclopropane-1-carboxylate deaminase gene acdS in phytobeneficial Azospirillum lipoferum 4B and other Proteobacteria

C. Prigent-Combaret , D. Blaha , Joel F. Pothier , L. Vial , M. A. Poirier et al.
FEMS Microbiology Ecology, 2008, 65 (2), pp.202-219. ⟨10.1111/j.1574-6941.2008.00474.x⟩
Article dans une revue hal-02555008 v1

Physical organizationand phylogenetic analysis of acdRas leucineresponsive regulatorof the1-aminocyclopropane-1-carboxylate deaminase gene acdSin phytobene¢cial Azospirillum lipoferum4B and other Proteobacteria

Claire Prigent-Combaret , Didier Blaha , Joel F. Pothier , Ludovic Vial , Marie-Andrée Poirier et al.
FEMS Microbiology Ecology, 2008, 65, pp.202-219. ⟨10.1111/j.1574-6941.2008.00474.x⟩
Article dans une revue halsde-00344095 v1

Phase and antigenic variation mediated by genome modifications

Florence Wisniewski-Dyé , Ludovic Vial
Antonie van Leeuwenhoek, 2008, 94, pp.493-515. ⟨10.1007/s10482-008-9267-6⟩
Article dans une revue istex halsde-00344103 v1

Phase Variation and Genomic Architecture Changes in Azospirillum

Ludovic Vial , Céline Lavire , Patrick Mavingui , Didier Blaha , Jacqueline Haurat et al.
Journal of Bacteriology, 2006, 188 (15), pp.5364-5373
Article dans une revue hal-00112563 v1

N-acyl-homoserine lactone-mediated quorum-sensing in Azospirillum: an exception rather than a rule.

Ludovic Vial , Caroline Cuny , Katia Gluchoff-Fiasson , Gilles Comte , Phil M. Oger et al.
FEMS Microbiology Ecology, 2006, 58, pp.155-168. ⟨10.1111/j.1574-6941.2006.00153.x⟩
Article dans une revue hal-00119123 v1

Construction of a recA mutant of Azospirillum lipoferum and involvement of recA in phase variation

Ludovic Vial , Joël Pothier , Philippe Normand , Yvan Moënne-Loccoz , René Bally et al.
FEMS Microbiology Letters, 2004, 236 (2), pp.291-299. ⟨10.1111/j.1574-6968.2004.tb09660.x⟩
Article dans une revue hal-02569682 v1

Mitochondrial methionyl-tRNAfMet formyltransferase from Saccharomyces cerevisiae: gene disruption and tRNA substrate specificity.

L. Vial , P. Gomez , Michel Panvert , Emmanuelle Schmitt , Sylvain Blanquet et al.
Biochemistry, 2003, 42 (4), pp.932-9. ⟨10.1021/bi026901x⟩
Article dans une revue istex hal-00770716 v1

Recognition of tRNAs by Methionyl-tRNA transformylase from mammalian mitochondria.

N. Takeuchi , L. Vial , Michel Panvert , Emmanuelle Schmitt , K. Watanabe et al.
Journal of Biological Chemistry, 2001, 276 (23), pp.20064-8. ⟨10.1074/jbc.M101007200⟩
Article dans une revue hal-00770925 v1

<i>Coxiella burnetii</i> infection in horses: seroprevalence, environmental exposure and clinical expression

Isabelle Desjardins , Aurélien Joulie , Loïc Legrand , Sylvie Lecollinet , L. Vial et al.
Conference Voorjaarsdagen, Apr 2019, Fokker Terminal, The Hague, Netherlands
Communication dans un congrès hal-02790018 v1

Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis

Khaoula Habbadi , Thierry Meyer , Ludovic Vial , Vincent Gaillard , Rachid Benkirane et al.
3. Biennial International Congress on Natural Products and Biocontrol, Sep 2018, Perpignan, France. ⟨10.1007/s11356-017-1008-9⟩
Communication dans un congrès hal-02737066 v1

Particularités génomiques et adaptations spécifiques des espèces bactériennes : cas d'Agrobacterium fabrum

Tony Campillo , Jessica Baude , Ludovic Vial , Floriant Bellvert , Florent Lassalle et al.
10. Plant-Bacteria Interactions Meeting, 2012, Aussois, France
Communication dans un congrès hal-02547657 v1

Airflow modeling in a CT-scanned human airway geometry

L. Vial , Diane Perchet , R. Fodil , G. Caillibotte , Catalin Fetita et al.
Proceedings of the 14th European Society of Biomechanics Conference, Jul 2004, Hertogenbosch, Netherlands
Communication dans un congrès hal-00273566 v1

Coupling experimental measurements and computational modelling of airflow using physical and numerical 3D-reconstructions of realistic human airway geometry

R. Fodil , Ludovic de Rochefort , L. Vial , C. Croce , Diane Perchet et al.
EUROMECH Colloquium No 456 on Experimental and Computational Biofluid Mechanics, Oct 2004, Aachen, Germany. pp.37-39
Communication dans un congrès hal-00273549 v1

Phenotypic Variation in Azospirillum spp. and Other Root-Associated Bacteria

Florence Wisniewski-Dye , Ludovic Vial , Saul Burdman , Yaacov Okon , Anton Hartmann
Frans J. de Bruijn. Biological Nitrogen Fixation, John Wiley & Sons, Inc, pp.1047-1054, 2015, 9781119053095. ⟨10.1002/9781119053095.ch103⟩
Chapitre d'ouvrage hal-02477226 v1

Cell–Cell Communication in Azospirillum and Related PGPR

Florence Wisniewski-Dyé , Ludovic Vial
Fabricio Dario Cassán; Yaacov Okon; Cecilia M. Creus. Handbook for Azospirillum, Springer International Publishing, pp.263-285, 2015, ⟨10.1007/978-3-319-06542-7_15⟩
Chapitre d'ouvrage hal-02457929 v1

Rapid and Efficient Methods to Isolate, Type Strains and Determine Species of Agrobacterium spp. in Pure Culture and Complex Environments

Malek Shams , Tony Campillo , Céline Lavire , Daniel Muller , Xavier Nesme et al.
Biochemical Testing, InTech, 2012, 978-953-51-0249-6. ⟨10.5772/36068⟩
Chapitre d'ouvrage hal-02566900 v1

Rapid and Efficient Methods to Isolate, Type Strains and Determine Species of Agrobacterium spp. in Pure Culture and Complex Environments

Malek Shams , Tony Campillo , Céline Lavire , Daniel Muller , Xavier Nesme et al.
Biochemical testing, In Tech, 2012, 978-953-51-0249-6
Chapitre d'ouvrage hal-02804693 v1

Aminoacyl-tRNA maturation

Sylvain Blanquet , Yves Mechulam , Emmanuelle Schmitt , L. Vial
Jacques Lapointe; Léa Brakier-Gingras. Translation Mechanisms, Landes Biosciences, pp.65-79, 2003, 978-0-306-47839-0
Chapitre d'ouvrage hal-00771970 v1