Youri Timsit

Publications

Article dans une revue (37)

The role of ribosomal protein networks in ribosome dynamics Youri Timsit,Grégoire Sergeant-Perthuis,Daniel Bennequin Nucleic Acids Research, 2025, 53, ⟨10.1093/nar/gkae1308⟩ Article dans une revue hal-04978839v1
The Expanding Universe of Extensions and Tails: Ribosomal Proteins and Histones in RNA and DNA Complex Signaling and Dynamics Youri Timsit Genes, 2025, 16 (1), pp.45. ⟨10.3390/genes16010045⟩ Article dans une revue (article de synthèse) hal-04978833v1
Protein Fold Usages in Ribosomes: Another Glance to the Past Inzhu Tanoz,Youri Timsit International Journal of Molecular Sciences, 2024, 25, ⟨10.3390/ijms25168806⟩ Article dans une revue hal-04733039v1
Evolution of ribosomal protein network architectures Y. Timsit,Grégoire Sergeant-Perthuis,Daniel Bennequin Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-020-80194-4⟩ Article dans une revue hal-03120751v1
Bioluminescence and Photoreception in Unicellular Organisms: Light-Signalling in a Bio-Communication Perspective Youri Timsit,Magali Lescot,Martha Valiadi,Fabrice Not International Journal of Molecular Sciences, 2021, 22 (21), pp.11311. ⟨10.3390/ijms222111311⟩ Article dans une revue hal-03402318v1
Towards the Idea of Molecular Brains Y. Timsit,Grégoire Sergeant-Perthuis International Journal of Molecular Sciences, 2021, 22 (21), pp.11868. ⟨10.3390/ijms222111868⟩ Article dans une revue hal-03430257v1
Diversity and evolution of bacterial bioluminescence genes in the global ocean Thomas Vannier,Pascal Hingamp,Floriane Turrel,Lisa Tanet,Magali Lescotet al. NAR Genomics and Bioinformatics, 2020, 2 (2), ⟨10.1093/nargab/lqaa018⟩ Article dans une revue hal-02514159v1
Nervous-Like Circuits in the Ribosome Facts, Hypotheses and Perspectives Y. Timsit,Daniel Bennequin International Journal of Molecular Sciences, 2019, ⟨10.3390/ijms20122911⟩ Article dans une revue hal-02390099v1
Neuron-Like Networks Between Ribosomal Proteins Within the Ribosome Olivier Poirot,Y. Timsit Scientific Reports, 2016, 6 (1), ⟨10.1038/srep26485⟩ Article dans une revue hal-01816591v1
DNA Self-Assembly: From Chirality to Evolution Y. Timsit International Journal of Molecular Sciences, 2013, 14 (4), pp.8252-8270. ⟨10.3390/ijms14048252⟩ Article dans une revue hal-01816598v1
DNA-Directed Base Pair Opening Y. Timsit Molecules, 2012, 17 (10), pp.11947-11964. ⟨10.3390/molecules171011947⟩ Article dans une revue hal-02008045v1
DNA-DNA Recognition: From Tight Contact to Fatal Attraction Y. Timsit InTech, 2012 Article dans une revue hal-02008304v1
Cytosine, the double helix and DNA self-assembly Y. Timsit,Peter Varnai Journal of Molecular Recognition, 2011, 24 (2), pp.137-138 Article dans une revue hal-02008070v1
Local sensing of global DNA topology: from crossover geometry to type II topoisomerase processivity Y. Timsit Nucleic Acids Research, 2011, 39 (20), pp.8665-8676 Article dans une revue hal-02008064v1
Helical Chirality: a Link between Local Interactions and Global Topology in DNA Y. Timsit,Péter Várnai PLoS ONE, 2010, 5 (2), pp.e9326. ⟨10.1371/journal.pone.0009326⟩ Article dans une revue hal-02008080v1
Differential stability of DNA crossovers in solution mediated by divalent cations Péter Várnai,Y. Timsit Nucleic Acids Research, 2010, 38 (12), pp.4163-4172 Article dans une revue hal-02008075v1
The Role of Disordered Ribosomal Protein Extensions in the Early Steps of Eubacterial 50 S Ribosomal Subunit Assembly Y. Timsit,Zahir Acosta,Frédéric Allemand,Claude Chiaruttini,Mathias Springer International Journal of Molecular Sciences, 2009, 10 (3), pp.817-834. ⟨10.3390/ijms10030817⟩ Article dans une revue hal-02008085v1
Coexistence of two protein folding states in the crystal structure of ribosomal protein L20. Y. Timsit,F. Allemand,C. Chiaruttini,M. Springer EMBO Reports, 2007, 7, pp.1013-1018 Article dans une revue hal-00161595v1
The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): Metal ion binding correlates with base unstacking and groove contraction Y. Timsit,Sophie Bombard RNA, 2007, 13 (12), pp.2098-2107 Article dans une revue hal-02008106v1
Coexistence of two protein folding states in the crystal structure of ribosomal protein L20 Y. Timsit,F. Allemand,C. Chiaruttini,M. Springer EMBO Reports, 2006, 7, pp.1013-1018 Article dans une revue hal-00114281v1
Coexistence of two protein folding states in the crystal structure of ribosomal protein L20 Y. Timsit,Frédéric Allemand,Claude Chiaruttini,Mathias Springer EMBO Reports, 2006, 7 (10), pp.1013-1018. ⟨10.1038/sj.embor.7400803⟩ Article dans une revue hal-02008118v1
Convergent Evolution of MutS and Topoisomerase II for Clamping DNA crossovers and stacked Holliday junctions Y. Timsit Journal of Biomolecular Structure and Dynamics, 2001, 19 (2), pp.215-218. ⟨10.1080/07391102.2001.10506733⟩ Article dans une revue hal-02008143v1
Hydration and structural alterations of A-DNA. Implications for the accuracy of DNA replication. C Mayer,Y. Timsit Cellular and Molecular Biology, 2001, 47 (5), pp.815-22 Article dans une revue hal-02008139v1
DNA Structure and Polymerase Fidelity: A New Role for A-DNA Y. Timsit Journal of Biomolecular Structure and Dynamics, 2000, 17 (sup1), pp.169-176. ⟨10.1080/07391102.2000.10506617⟩ Article dans une revue hal-02008153v1
Left-handed DNA Crossovers. Implications for DNA-DNA Recognition and Structural Alterations Y. Timsit,Michal Shatzky-Schwartz,Zippora Shakked Journal of Biomolecular Structure and Dynamics, 1999, 16 (4), pp.775-785. ⟨10.1080/07391102.1999.10508292⟩ Article dans une revue hal-02008182v1
DNA structure and polymerase fidelity 1 1Edited by T. Richmond Y. Timsit Journal of Molecular Biology, 1999, 293 (4), pp.835-853. ⟨10.1006/jmbi.1999.3199⟩ Article dans une revue istex hal-02008161v1
Hydration and recognition of methylated CpG steps in DNA C. Mayer-Jung,D. Moras,Y. Timsit EMBO Journal, 1998, 17 (9), pp.2709-2718. ⟨10.1093/emboj/17.9.2709⟩ Article dans une revue hal-02008233v1
Symmetry and chirality in topoisomerase II-DNA crossover recognition 1 1Edited by T. Richmond B Timsit,Bertrand Duplantier,J Jannink,Jean-Louis Sikorav,Y. Timsitet al. Journal of Molecular Biology, 1998, 284 (5), pp.1289-1299. ⟨10.1006/jmbi.1998.2281⟩ Article dans une revue istex hal-02008222v1
DNA crossovers and type II DNA topoisomerases: a thermodynamical study 1 1Edited by T. Richmond Y Sikorav,Bertrand Duplantier,Gérard Jannink,Y. Timsit,Jean-Louis Sikorav Journal of Molecular Biology, 1998, 284 (5), pp.1279-1287. ⟨10.1006/jmbi.1998.2280⟩ Article dans une revue istex hal-02008229v1
Effect of cytosine methylation on DNA-DNA recognition at CpG steps Claudine Mayer-Jung,Dino Moras,Y. Timsit Journal of Molecular Biology, 1997, 270 (3), pp.328-335. ⟨10.1006/jmbi.1997.1137⟩ Article dans une revue istex hal-02008237v1
Cruciform structures and functions. Youri Timsit,Dino Moras Quarterly Reviews of Biophysics, 1996, 29 (4), pp.279-307 Article dans une revue hal-02008246v1
Self-fitting and Self-modifying Properties of theB-DNA Molecule Y. Timsit,Dino Moras Journal of Molecular Biology, 1995, 251 (5), pp.629-647. ⟨10.1006/jmbi.1995.0461⟩ Article dans une revue istex hal-02008250v1
DNA self-fitting: the double helix directs the geometry of its supramolecular assembly. Y. Timsit,D. Moras EMBO Journal, 1994, 13 (12), pp.2737-46 Article dans une revue hal-02008254v1
Crystallization of DNA. Y. Timsit,D. Moras Methods in Enzymology, 1992, 211, pp.409-29 Article dans une revue hal-02008256v1
Groove-backbone interaction in B-DNA. Implication for DNA condensation and recombination. Y. Timsit,D. Moras Journal of Molecular Biology, 1991, 221 (3), pp.919-40 Article dans une revue hal-02008263v1
Base-pairing shift in the major groove of (CA)n tracts by B-DNA crystal structures Y. Timsit,Eric Vilbois,Dino Moras Nature, 1991, 354 (6349), pp.167-170. ⟨10.1038/354167a0⟩ Article dans une revue istex hal-02008260v1
Unusual helical packing in crystals of DNA bearing a mutation hot spot R Timsit,Eric Westhof,Robert P Fuchs,Dino Moras,Y. Timsit Nature, 1989, 341 (6241), pp.459-462. ⟨10.1038/341459a0⟩ Article dans une revue istex hal-02008266v1

Chapitre d'ouvrage (1)

DNA self-fitting Y. Timsit Proceeding of the eleventh conversation, state university of New York, Albany, eds R. Sarma and M. Sarma, Adenine press., 1995 Chapitre d'ouvrage hal-02398491v1

Pré-publication, Document de travail (2)

Deviation from Power-Law Distribution when Scaling the Distribution of Marine Plankton Folds from Genomes to Communities Lucas Pavlovic,Caroline Vernette,Emanuele Pigani,Louis Joigneaux,Alexandre Labesseet al. 2025 Pré-publication, Document de travail hal-05038679v1
Equatorial to Polar genomic variability of the microalgae &lt;i&gt;Bathycoccus prasinos&lt;/i&gt; Jade Leconte,Youri Timsit,Tom O Delmont,Magali Lescot,Gwenael Piganeauet al. 2023 Pré-publication, Document de travail (preprint/prepublication) hal-04308022v1