Yves Gibon

Publications

Communication dans un congrès (69)

Comparative constraint-based modelling of fruit development across species highlights nitrogen metabolism in the growth- defence trade-off Beaumont Chloé,Cassan Cédric,Sylvain Prigent,Hilbert-Masson Ghislaine,Renaud Christelet al. JOBIM 2024 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2024, Toulouse, France Communication dans un congrès hal-04677435v1
Insights into physiological responses of different grapevine varieties to Flavescence Dorée infection: an integrated approach Loreen Larroquet,Enora Bodin,Cédric Cassan,Camille Jollard,Marie-Cecile Dufouret al. 6. European Bois Noir workshop and 1st International Pro-AECOGY conference, UMR-1332 Fruit Biology and Pathology, University of Bordeaux and INRAE, May 2024, Bordeaux (France), France Communication dans un congrès hal-04650385v1
Unraveling Brassica napus leaf metabolic diversity: leveraging machine learning for agronomic trait prediction Millena C. Barros Santos,Sylvain Prigent,Yves Gibon,Anne Laperche,Alain Bouchereauet al. 16émes journées scientifiques du RFMF, 2024, Saint Malo (FR), France Communication dans un congrès hal-05412488v1
Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficit Maria Urrutia,Melisande Blein-Nicolas,Olivier Fernandez,Stéphane Bernillon,Mickael Maucourtet al. Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Communication dans un congrès hal-03878405v1
Modeling berry growth and quality formation at multiple levels Zhanwu Dai,Jinliang Chen,Junqi Zhu,Yongjian Wang,Michel Génardet al. XIth International Symposium on Grapevine Physiology and Biotechnology, Oct 2021, Stellenbosch, South Africa Communication dans un congrès hal-04730090v1
Effet de la sécheresse sur l'expression des symptômes foliaires de l'esca Giovanni Bortolami,Gregory A. Gambetta,Cédric Cassan,Silvina Dayer,Elena Farolfiet al. Journées Nationales des maladies du bois de la vigne, Nov 2021, Reims, France Communication dans un congrès hal-03582553v1
An integrated fruit model toolkit: combining fruit biophysical processes with central carbon metabolism J.L. Chen,Bertrand Beauvoit,Sophie Colombie,Léa Roch,Coffi Belmys Cakpoet al. Symposium on Advanced Technologies and Management for Innovative Greenhouses: GreenSys2019, Jun 2019, Angers, France. pp.401-410, ⟨10.17660/ActaHortic.2020.1296.52⟩ Communication dans un congrès hal-03125090v1
An overview of NMR applications in metabolite profiling of small molecules for plant metabolism studies Catherine Deborde,Daniel Jacob,Jean-Xavier J.-X. Fontaine,R. Molinie,Léa Rochet al. 2. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany Communication dans un congrès hal-02786819v1
Using metabolomic data to predict Maize yield Sylvain Prigent,Olivier Fernandez,Stéphane Bernillon,Pierre Pétriacq,Annick Moinget al. JOBIM 2019, Jul 2019, Nantes, France. pp.151 Communication dans un congrès hal-02565229v1
Dissecting G×E and QTL×E of maize yield in contrasting scenarios of light, heat and water deficit Emilie J. Millet,Willem Kruijer,Santiago Alvarez Prado,Llorenç Cabrera-Bosquet,Aude Coupel-Ledruet al. 24. Eucarpia Maize and Sorghum Conference, TUM School of Life Sciences Weihenstephan, Oct 2019, Freising, Germany Communication dans un congrès hal-04154261v1
Dynamics of bud metabolites during dormancy in sweet cherry genotypes with contrasted chilling requirements Rémi Beauvieux,Bénédicte Wenden,Patricia Ballias,Hélène Christmann,Yves Gibonet al. 8. International Cherry Symposium, Jun 2017, Yamagata, Japan. ⟨10.17660/ActaHortic.2019.1235.56⟩ Communication dans un congrès hal-02737043v1
Peptide filtering differently affects the performances of XIC-based quantifcation methods Melisande Blein-Nicolas,Isma Belouah,Thierry Balliau,Yves Gibon,Michel Zivyet al. Journées Protéome Vert, Apr 2018, Paris, France Communication dans un congrès hal-03879922v1
Integration of “omics” data provides tools for understanding effects of variable nitrogen (N) and sulphur (S) supply during wheat grain development Titouan Bonnot,Emmanuelle Bancel,David Alvarez,Mireille Dardevet,Julie Boudetet al. COST FA1306 meeting, Feb 2016, Versailles, France Communication dans un congrès hal-02340464v1
Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems Cecile Cabasson,Sophie Colombie,Bertrand Beauvoit,Christine Nazaret,Camille Benardet al. Colloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France Communication dans un congrès hal-02739719v1
Is failure of reproductive development under water or heat stress due to C shortage ? Bertrand Muller,Nathalie Luchaire,Vincent Oury,Francois Tardieu,Yves Gibonet al. SEB Symposium, Jul 2016, Brighton, United Kingdom Communication dans un congrès hal-02740765v1
Flux balance modelling in developing tomato fruit: the respiration climacteric as an emergent property Sophie S. Colombie,Bertrand Beauvoit,Christine Nazaret,Camille Bénard,Cécile Cabassonet al. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., May 2016, Montpellier, France Communication dans un congrès hal-02740471v1
Leaf marker metabolites for low nitrogen stress in maize Maria Urrutia Rosauro,Stéphane Bernillon,M. Maucourt,Catherine Deborde,Daniel Jacobet al. Plant Biology Europe EPSO/FESPB 2016, Jun 2016, Prague, Czech Republic Communication dans un congrès hal-01605806v1
Consequences of high temperatures and drought on peach fruit production strongly depends on their period of occurence Fatima Adra,Gilles Vercambre,Daniel Plénet,Benedicte Bakan,Agathe Nobletet al. Climate-Smart Agriculture 2015 : Global Science Conference, Mar 2015, Montpellier, France Communication dans un congrès hal-01603456v1
Investigating drought resistance using metabolic phenotyping Yves Gibon DROPS – EUCARPIA Conference : Recent progress in drought tolerance from genetics to modelling, Jun 2015, Montpellier, France Communication dans un congrès hal-01603500v1
Using metabolomic approaches and modelling of central metabolic to study fleshy fruit quality Sophie S. Colombie,Bertrand Beauvoit,Dominique D. Rolin,Stéphane Bernillon,Camille Bénardet al. 1. International Symposium on Metabolomics in Mexico, Jun 2015, Guadalajara, Mexico. 2 p Communication dans un congrès hal-02800371v1
Investigating plant performance using metabolic phenotyping Yves Gibon COST FA 1306: The quest for tolerant varieties - Phenotyping at plant and cellular level, Jun 2015, IPK Gatersleben, Germany Communication dans un congrès hal-01603501v1
High or low fructose? Consequences for sugar metabolism in peach fruit Elsa Desnoues,Yves Y. Gibon,Valentina Baldazzi,Veronique Signoret,Michel M. Génardet al. 8. ISHS International Peach Symposium, Jun 2013, Matera, Italy. 1 p Communication dans un congrès hal-02740591v1
Cellular and subcellular metabolomics reveal changes during tomato leaf development Clémence de Jaham,Benjamin Thiombiano,Camille Bénard,A.P. Alonso,J.C. Cocuronet al. 9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France Communication dans un congrès hal-02740382v1
Fruit systems biology Yves Gibon Tsukuba Global Science Week 2015, Sep 2015, Tsukuba, Japan Communication dans un congrès hal-01603502v1
Role of plant carbon status in yield components responses to elevated temperatures in microvine Nathalie Luchaire,Markus Rienth,Charles Romieu,Laurent Torregrosa,Yves Gibonet al. 19. Journées Internationales de Viticulture GiESCO, May 2015, Gruissan, France. 810 p Communication dans un congrès hal-01506406v1
Genomic studies on a highly complex trait in Sweet Cherry: tolerance to rain-induced fruit José Quero-Garcia,José Antonio Campoy-Corbalan,Guillaume Lalanne-Tisne,Jacques Joly,Yves Y. Gibonet al. Plant and Animal Genome XXIII, Jan 2015, San Diego, United States Communication dans un congrès hal-02742464v1
Dynamique de métabolites en relation avec l’état de dormance des bougeons floraux chez le cerisier doux Rémi Beauvieux,Bénédicte B. Wenden,Yves Y. Gibon,Elisabeth Dirlewanger Colloque Francophone Phénologie, Nov 2015, Clermont-Ferrand, France Communication dans un congrès hal-02743152v1
Fruit systems biology Yves Gibon IPMB 2015 - 11. International Congress of Plant Molecular Biology, Oct 2015, Igauçu Cataratas, Brazil Communication dans un congrès hal-01603499v1
Using developmental and diurnal compositional changes of tomato to study metabolism Camille Bénard,Stéphane Bernillon,Benoit Biais,Sonia Osorio-Algar,Mickael M. Maucourtet al. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p Communication dans un congrès hal-02793195v1
Modelling fluxes and metabolic network analysis of developing tomato fruits Sophie S. Colombie,Bertrand Beauvoit,Christine Nazaret,Martine Dieuaide Noubhani,Jean-Pierre Mazatet al. Bordeaux Computational Biology and Bioinformatics, Nov 2014, Bordeaux, France Communication dans un congrès hal-02796388v1
Genetic architecture of quantitative responses to &lt;em&gt;Turnip Mosaic Virus&lt;/em&gt; (TuMV) infection trait loci in Arabidopsis thaliana through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau,Bernadette Rubio,Zofia Nehr,Patrick Cosson,Mélodie Caballeroet al. Réseau résistances durables, 2014, Lauret, France Communication dans un congrès hal-02798441v1
Fruit quality in sweet cherry: from QTLs to candidate genes Elisabeth Dirlewanger,José Antonio Campoy-Corbalan,Loick Le Dantec,Jacques Joly,Lydie Fouilhauxet al. 7. International Rosaceae Genomics Conference, Jun 2014, Seattle, United States Communication dans un congrès hal-02793254v1
Association mapping fo quantitative responses to Turnip Mosaic Virus (TuMV) infection trait loci in Arabidopsis thaliana through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau,Bernadette Rubio,Zofia Nehr,Patrick Cosson,Mélodie Caballeroet al. GDR Génétique Quantitative dans les Populations Naturelles, Oct 2015, Toulouse, France Communication dans un congrès hal-01601534v1
La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes Dominique D. Rolin,Bertrand Beauvoit,Stéphane Bernillon,Camille Bénard,Patricia Balliaset al. 8e Congrès Jeunes Chercheurs de la SFBV, Société Française de Biologie Végétale (SFBV). FRA., Jun 2014, Tours, France. 1 p Communication dans un congrès hal-02801036v1
Metabolic Phenotyping, in Quest of Serendipity Yves Y. Gibon Journée Scientifique BAP-INRA, Apr 2014, Pont Royal, France Communication dans un congrès hal-02792057v1
Old school analytical biochemistry in the era of systems biology Yves Y. Gibon Accliphot, Oct 2013, Zurich, Switzerland Communication dans un congrès hal-02802824v1
Fruity data, juicy concepts Yves Y. Gibon Institute's days at the MPIMP-Golm, Jun 2013, Potsdam, Germany Communication dans un congrès hal-02805469v1
Réseaux métaboliques Yves Y. Gibon Colloque AllEnvi - "Modélisation multi-échelle des plantes", Nov 2013, Lyon, France Communication dans un congrès hal-02802439v1
Association mapping of quantitative responses to &lt;em&gt;Turnip mosaic virus&lt;/em&gt; (TuMV) infection trait loci in &lt;em&gt;Arabidopsis thaliana&lt;/em&gt; through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau,Patrick Cosson,Mélodie Caballero,Frederic Revers,Yves Y. Gibonet al. 14. Rencontres de Virologie Végétale, Jan 2013, Aussois, France. p. 12 Communication dans un congrès hal-02811083v1
Diurnal compositional changes of tomato fruit and leaf Camille Benard,Stéphane Bernillon,Sonia Osorio-Algar,Mickael M. Maucourt,Benoit Biaiset al. Metabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p Communication dans un congrès hal-02803658v1
Combining systems biology, genome resequencing and MAGIC population to decipher the genetic variation of tomato fruit quality Laura Pascual,Jiaxin Xu,Nelly Desplat,Yves Y. Gibon,Annick Moinget al. 10. Solanaceae conference (SOL 2013), Oct 2013, Beijing, China Communication dans un congrès hal-02750138v1
Impact of the tomato fruit temperature on its growth and composition Hélène Gautier,Nadia Bertin,Valentina Baldazzi,Béatrice Brunel,Jean-Claude L'Hôtelet al. 2. Symposium on Horticulture in Europe, Jul 2012, Angers, France. 1 p Communication dans un congrès hal-02747573v1
Metabolomics data integration in tomato plant-fruit systems biology Camille Bénard,Dominique D. Rolin,Stéphane Bernillon,Mickael M. Maucourt,Benoit Biaiset al. Metabolomics-2012, International Conference and Exhibition on Metabolomics & Systems Biology, Feb 2012, San Francisco, United States Communication dans un congrès hal-02803433v1
A multi-Ievel omic approach of tomato fruit quality Jiaxin Xu,Laura Pascual,Nelly Desplat,Mireille Faurobert,Yves Y. Gibonet al. 2. Symposium on Horticulture in Europe, Jul 2012, Angers, France Communication dans un congrès hal-02748459v1
Compositional changes of tomato seeds during development and maturation Cécile Cabasson,Ousmane Harouna Kore,Catherine Deborde,Mickael M. Maucourt,Annick Moinget al. 6. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique (RFMF), May 2012, Nantes, France. p. 60 Communication dans un congrès hal-02807332v1
Ozone-induced detoxification processes in three &lt;em&gt;populus&lt;/em&gt; genotypes: metabolomic and molecular approaches Jennifer Dumont,M. Keski-Saari,M. Keinanen,S. Kontunen Soppela,David Cohenet al. Joint International Conference “Biological Reactions of Forests to Climate Change and Air Pollution”, International Union of Forest Research Organisations (IUFRO). AUT., May 2012, Kaunas, Lithuania Communication dans un congrès hal-02745486v1
Genetic diversity, inheritance and integration of multi-level omic data in tomato fruit Jiaxin Xu,Laura Pascual-Banuls,Nelly Desplat,Jean-Paul Bouchet,Yves Y. Gibonet al. 20. Plant and Animal Genome, Jan 2012, San Diego, United States. pp.W643 Communication dans un congrès hal-02810053v1
Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm) Catherine Deborde,Stéphane Bernillon,Mickael M. Maucourt,Cécile Cabasson,Benoit Biaiset al. 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France Communication dans un congrès hal-02749839v1
Régulation de la synthèse des protéines de réserve du grain de blé en réponse à la disponibilité en azote et soufre Anne A. Plessis,Zhanwu Z. Dai,Nathalie N. Duchateau,Mireille M. Dardevet,Duyên D. Prodhommeet al. Congrès Grains, Oct 2011, Nantes, France Communication dans un congrès hal-00964176v1
The diversitiy of Oenococcus oeni J. Bridier,Claisse O,Vanessa Vaizant,Coton M,Cécile Miot-Sertieret al. Actes de colloques du 9e symposium international d’Œnologie de Bordeaux, 2011, Bordeaux, France. pp.290-291 Communication dans un congrès hal-05261434v1
Integrated approaches for deciphering the mechanisms controlling fruit nutritional quality in tomato Christophe Rothan,Nicolas Viron,Louise Gilbert,Virginie V. Garcia,Johann J. Petitet al. Colloque AI Fruit, Apr 2011, Angers, France Communication dans un congrès hal-02804064v1
Variation journalière de la composition métabolique de fruit de tomate en cours de maturation Camille Benard,Stéphane Bernillon,Mickael M. Maucourt,Benoit Biais,Sonia Osorio-Algaret al. 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France Communication dans un congrès hal-02749748v1
Fast and cheap metabolic phenotyping in plants using microplate technology Yves Y. Gibon 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Communication dans un congrès hal-02752517v1
Phenotypic variability among wild Vitis species: a tool to study some mechanisms underlying berry development and composition Nathalie Ollat,Stephane Decroocq,Louis Bordenave,Ghislaine Hilbert,Cyril Hevinet al. 2. Rencontres Annuelles de l'ISVV, Institut des Sciences de la Vigne et du Vin (ISVV). FRA., Jul 2010, Villenave d'Ornon, France Communication dans un congrès hal-02817846v1
A role for carbon metabolism in plant growth response to soil water deficit? An integrated perspective Bertrand Muller,Irène Hummel,Florent Pantin,Ronan Sulpice,Mark Stittet al. SEB Main Meeting 2010, Jun 2010, Prague, Czech Republic Communication dans un congrès hal-02751275v1
Plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Tools and applications at PMFB Catherine Deborde,Stéphane Bernillon,Mickael M. Maucourt,Cécile Cabasson,Isabelle Quintanaet al. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Communication dans un congrès hal-02756773v1
Fast and cheap metabolic phenotyping for functional genomics Yves Y. Gibon Indo French Symposium, Jan 2010, Lucknow, India Communication dans un congrès hal-02752977v1
C metabolism and plant growth under water deficit: chicken and egg Bertrand Muller,Irène Hummel,Florent Pantin,Ronan Sulpice,Maria Piqueset al. Salt & Water Stress in Plants : from molecules to crops, Gordon Research Conferences (GRC). USA., Jun 2010, Les Diablerets, Switzerland Communication dans un congrès hal-02756341v1
Intra and interspecific biochemical phenotyping of Vitis Nathalie Ollat,Catherine Deborde,Christel Renaud,Mickael M. Maucourt,Stéphanie Doumouyaet al. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Communication dans un congrès hal-02757382v1
Biochemical phenotyping of Vitis by 1H-NMR profiling and targeted enzymatic analysis Nathalie Ollat,Catherine Deborde,Christel Renaud,Mickael M. Maucourt,Stéphanie Doumouyaet al. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands Communication dans un congrès hal-02753834v1
NMR profiling and more for the characterization of melon genetic resources and melon fruit physiology Annick Moing,Asaph Aharoni,Benoit Biais,Ilana Rogachev,Sagit Meiret al. 4. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Communication dans un congrès hal-02754338v1
Applications and tools in plant metabolomics at Bordeaux Metabolome-Fluxome Facility Catherine Deborde,Stéphane Bernillon,Mickael M. Maucourt,Cécile Cabasson,Patricia Balliaset al. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands Communication dans un congrès hal-02757642v1
Fast and cheap metabolic phenotyping in plants using microplate technology Yves Y. Gibon EPSO workshop on plant phenotyping, Nov 2009, Jülich, Germany Communication dans un congrès hal-02750440v1
Ecophysiology meets metabolic profiling Yves Y. Gibon Interdrought III, Oct 2009, Shangaï, China Communication dans un congrès hal-02750983v1
Carbon budget, protein metabolism and growth: an integrative untargeted approach in Arabidopsis thaliana leaves Yves Y. Gibon 8. Colloque national de la SFBV, Jul 2009, Strasbourg, France Communication dans un congrès hal-02752011v1
Xeml Lab - Give old data a new life Yves Y. Gibon CAREX laboratory procedures workshop, Jun 2009, Viterbo, Italy Communication dans un congrès hal-02753343v1
Ecophysiology meets metabolic profiling: an integrative approach of Arabidopsis thaliana responses to drought Irène Hummel,Florent Pantin,R. Sulpice,M. Piques,Gaelle Rollandet al. Interdrought III, Sep 2009, Shanghai, China Communication dans un congrès hal-02752763v1
Hyperprolinemia in leaf tissues of C3 plants subjected to osmotic upshift could reflect metabolic disorders at the mitochondrial level François R. Larher,Yves Gibon,Michael Moulin,Ronan Sulpice,P. Trotelet al. 6ème colloque national de la Société Française de Biologie Végétale, 2005, Arcachon, France Communication dans un congrès hal-00016081v1
Damages to oxidative properties of mitochondria from leaf of tissues of C3 plants could be assessed by the amount of proline accumulated under osmotic stress François R. Larher,Y. Gibon,Michael Moulin,Ronan Sulpice,P. Trotelet al. FESPB, 14th Congress of the Federation of European Societies of Plant Biology, 23-27 août 2004, Cracovie, Pologne, 2004, Cracovie, Poland Communication dans un congrès hal-00105872v1

Article dans une revue (178)

Assessment of phenotypic trait plasticity in the oilseed Camelina sativa using integrated early-stage abiotic stress and field studies Susana Silvestre,Sylvain Prigent,Pierre Pétriacq,L Kirsty Hassall,Malo Le Boulchet al. Plant Physiology, In press, pp.kiag052. ⟨10.1093/plphys/kiag052⟩ Article dans une revue hal-05506432v1
Branching Varies with Light Limitation Scenarios in relation with Changes in Carbon Source-Sink Dynamics Anne Schneider,Frédéric Boudon,Sabine Demotes-Mainard,Lydie Ledroit,Maria-Dolores Perez-Garciaet al. BioRxiv, 2026, ⟨10.64898/2026.01.27.702021⟩ Article dans une revue hal-05519473v1
Metabolic profiling of three Brachypodium species reveals different adaptive strategies to ammonium stress Marlon de la Peña,Izargi Vega-Mas,Gaëtan Glauser,Yves Gibon,Daniel Marinoet al. Plant Science, 2025, 360, pp.112684. ⟨10.1016/j.plantsci.2025.112684⟩ Article dans une revue hal-05245412v1
Interspecies predictions of growth traits from quantitative transcriptome data acquired during fruit development Chloé Beaumont,Sylvain Prigent,Kentaro Mori,Pierre Baldet,Joana Jorlyet al. Journal of Experimental Botany, 2025, pp.eraf122. ⟨10.1093/jxb/eraf122⟩ Article dans une revue hal-05037526v1
Natural variation in the adjustment of primary metabolism determines ammonium tolerance in the model grass Brachypodium distachyon Marlon de la Peña,Théo Poucet,Francesc Montardit-Tarda,Leyre Urmeneta,Jose Alberto Urbano-Gámezet al. Journal of Experimental Botany, 2024, 75 (22), pp.7237-7253. ⟨10.1093/jxb/erae382⟩ Article dans une revue hal-05125893v1
The rates of starch depletion and hydraulic failure both play a role in drought-induced seedling mortality Santiago Trueba,Noelia González Muñoz,Régis Burlett,Laurent J Lamarque,Yves Gibonet al. Annals of Forest Science, 2024, 81 (1), pp.27. ⟨10.1186/s13595-024-01246-7⟩ Article dans une revue hal-04667578v1
Identification of metabolic and protein markers representative of the impact of mild nitrogen deficit on agronomic performance of maize hybrids Maria Urrutia,Mélisande Blein-Nicolas,Olivier Fernandez,Stéphane Bernillon,Mickaël Maucourtet al. Metabolomics, 2024, 20 (6), pp.128. ⟨10.1007/s11306-024-02186-z⟩ Article dans une revue hal-04799829v1
Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants Julia Pastor-Fernández,Neus Sanmartín,Maria Manresa-Grao,Cédric Cassan,Pierre Pétriacqet al. Journal of Experimental Botany, 2024, 75 (13), pp.4111-4127. ⟨10.1093/jxb/erae146⟩ Article dans une revue hal-04612162v1
Genetic control of abiotic stress-related specialized metabolites in sunflower Marco Moroldo,Nicolas Blanchet,Harold Duruflé,Stéphane Bernillon,Thierry Bertonet al. BMC Genomics, 2024, 25 (1), pp.199. ⟨10.1186/s12864-024-10104-9⟩ Article dans une revue hal-04468891v1
Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis Pierre Baldet,Kentaro Mori,Sylvain Prigent,Guillaume Decros,Bertrand Beauvoitet al. Journal of Experimental Botany, 2024, 75 (9), pp.2631-2643. ⟨10.1093/jxb/erae032/7607105⟩ Article dans une revue hal-04530669v1
Phylogenetically diverse wild plant species use common biochemical strategies to thrive in the Atacama Desert Thomas Dussarrat,Ricardo Nilo-Poyanco,Tomás Moyano,Sylvain Prigent,Tim Jefferset al. Journal of Experimental Botany, 2024, 75 (11), pp.3596-3611. ⟨10.1093/jxb/erae117⟩ Article dans une revue hal-05125881v1
Integrated analysis of metabolites and enzyme activities reveals the plasticity of central carbon metabolism in grape (&lt;i&gt;Vitis vinifera&lt;/i&gt; cv. Cabernet Sauvignon) berries under carbon limitation Qian Tong,Yongjian Wang,Regina Feil,John E Lunn,Xiaobo Xuet al. Horticulture research, 2024, 12 (4), pp.uhae363. ⟨10.1093/hr/uhae363⟩ Article dans une revue hal-04997970v1
Different wheat loci are associated to heritable free asparagine content in grain grown under different water and nitrogen availability Mélanie Lavoignat,Cédric Cassan,Pierre Pétriacq,Yves Gibon,Emmanuel Heumezet al. TAG Theoretical and Applied Genetics, 2024, 137 (2), pp.46. ⟨10.1007/s00122-024-04551-x⟩ Article dans une revue hal-04461297v1
Metabolite quantification data based on 1H-NMR profiling of eggplant or pepper fruit during its development Léa Roch,Catherine Deborde,Daniel Jacob,Anaïs Clavé,Marguerite Batsaleet al. BMC Research Notes, 2024, 17 (1), pp.337. ⟨10.1186/s13104-024-06996-1⟩ Article dans une revue hal-04800078v1
Ecological and metabolic implications of the nurse effect of Maihueniopsis camachoi in the Atacama Desert Francisca Díaz,Thomas Dussarrat,Gabriela Carrasco-Puga,Sophie Colombie,Sylvain Prigentet al. New Phytologist, 2024, 241 (3), pp.1074-1087. ⟨10.1111/nph.19415⟩ Article dans une revue hal-04514679v1
Enzyme‐based kinetic modelling of ASC–GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability Guillaume Decros,Thomas Dussarrat,Pierre Baldet,Cédric Cassan,Cécile Cabassonet al. New Phytologist, 2023, ⟨10.1111/nph.19160⟩ Article dans une revue hal-04178513v1
Détermination des volumes cellulaires et subcellulaires par analyse d’images de microscopie : Comment estimer la vitesse de croissance de cellules du fruit ? Marie-Hélène Andrieu,Catherine Cheniclet,Martine Dieuaide-Noubhani,Bertrand Beauvoit,Yves Gibon NOV'AE - Numéros spéciaux, 2023, 14, pp.1-15. ⟨10.17180/novae-2023-NO-art14⟩ Article dans une revue hal-04575735v1
Blue light promotes ascorbate synthesis by deactivating the PAS/LOV photoreceptor that inhibits GDP- l -galactose phosphorylase Céline Bournonville,Kentaro Mori,Paul Deslous,Guillaume Decros,Tim Blomeieret al. The Plant cell, 2023, 35 (7), pp.2615-2634. ⟨10.1093/plcell/koad108⟩ Article dans une revue hal-04083263v1
GABA shunt pathway is stimulated in response to early defoliation-induced carbohydrate limitation in Mandarin fruits Radia Lourkisti,Sandrine Antoine,Olivier Pailly,François Luro,Yves Gibonet al. Heliyon, 2023, 9 (4), pp.e15573. ⟨10.1016/j.heliyon.2023.e15573⟩ Article dans une revue hal-04176065v1
Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites Annick Moing,Thierry Berton,Léa Roch,Salimata Diarrassouba,Stéphane Bernillonet al. BMC Plant Biology, 2023, 23 (365), ⟨10.1186/s12870-023-04370-0⟩ Article dans une revue hal-04183193v1
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Differences between tree stem CO 2 efflux and O 2 influx rates cannot be explained by internal CO 2 transport or storage in large beech trees Juliane Helm,Roberto L Salomón,Boaz Hilman,Jan Muhr,Alexander Knohlet al. Plant, Cell and Environment, 2023, Online first, ⟨10.1111/pce.14614⟩ Article dans une revue hal-04121662v1
Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience Thomas Dussarrat,Sylvain Prigent,Claudio Latorre,Stéphane Bernillon,Amélie Flandinet al. New Phytologist, 2022, 234 (5), pp.1614-1628. ⟨10.1111/nph.18095⟩ Article dans une revue hal-03626433v1
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The Evolution of Leaf Function during Development Is Reflected in Profound Changes in the Metabolic Composition of the Vacuole Alice Destailleur,Théo Poucet,Cecile Cabasson,Ana Paula Alonso,Jean-Christophe Cocuronet al. Metabolites, 2021, 11 (12), pp.848. ⟨10.3390/metabo11120848⟩ Article dans une revue hal-03505133v1
The NAD Kinase Slr0400 Functions as a Growth Repressor in Synechocystis sp. PCC 6803 Yuuma Ishikawa,Cedric Cassan,Aikeranmu Kadeer,Koki Yuasa,Nozomu Satoet al. Plant and Cell Physiology, 2021, 62 (4), pp.668-677. ⟨10.1093/pcp/pcab023⟩ Article dans une revue hal-03182729v1
Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis Maria Urrutia,Melisande Blein-Nicolas,Sylvain Prigent,Stéphane Bernillon,Catherine Debordeet al. Plant, Cell and Environment, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩ Article dans une revue hal-03107184v1
Leaf metabolomic data of eight sunflower lines and their sixteen hybrids under water deficit Thierry Berton,Stéphane Bernillon,Olivier Fernandez,Harold Duruflé,Amélie Flandinet al. OCL Oilseeds and fats crops and lipids, 2021, 28, 42 - 6 p. ⟨10.1051/ocl/2021029⟩ Article dans une revue (data paper) hal-03321074v1
Metabolic Profile Discriminates and Predicts Arabidopsis Susceptibility to Virus under Field Conditions Bernadette Rubio,Olivier Fernandez,Patrick Cosson,Thierry Berton,Mélodie Caballeroet al. Metabolites, 2021, 11 (4), pp.230. ⟨10.3390/metabo11040230⟩ Article dans une revue hal-03197197v1
Ammonium supply induces differential metabolic adaptive responses in tomato according to leaf phenological stage Théo Poucet,María Begoña González-Moro,Cecile Cabasson,Bertrand Beauvoit,Yves Gibonet al. Journal of Experimental Botany, 2021, 72 (8), pp.3185-3199. ⟨10.1093/jxb/erab057⟩ Article dans une revue hal-03179910v1
Overproduction of ascorbic acid impairs pollen fertility in tomato Paul Deslous,Céline Bournonville,Guillaume Decros,Yoshihiro Okabe,Jean-Philippe Mauxionet al. Journal of Experimental Botany, 2021, 72 (8), pp.3091-3107. ⟨10.1093/jxb/erab040⟩ Article dans une revue hal-03152478v1
Mitochondrial metabolism supports resistance to IDH mutant inhibitors in acute myeloid leukemia Lucille Stuani,Marie Sabatier,Estelle Saland,Guillaume Cognet,Nathalie Poupinet al. Journal of Experimental Medicine, 2021, 218 (5), pp.e20200924. ⟨10.1084/jem.20200924⟩ Article dans une revue hal-03563454v1
Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants María Ancín,Luis Larraya,Igor Florez-Sarasa,Camille Bénard,Alicia Fernández-San Millánet al. Journal of Experimental Botany, 2021, 72 (13), pp.4949-4964. ⟨10.1093/jxb/erab193⟩ Article dans une revue hal-03224310v1
Modelling predicts tomatoes can be bigger and sweeter if biophysical factors and transmembrane transports are fine‐tuned during fruit development Jinliang Chen,Bertrand Beauvoit,Michel Génard,Sophie Colombie,Annick Moinget al. New Phytologist, 2021, 230, pp.1489-1502. ⟨10.1111/nph.17260⟩ Article dans une revue hal-03152042v1
Grapevines under drought do not express esca leaf symptoms Giovanni Bortolami,Gregory Gambetta,Cédric Cassan,Silvina Dayer,Elena Farolfiet al. Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (43), pp.e2112825118. ⟨10.1073/pnas.2112825118⟩ Article dans une revue hal-03474970v1
Another Tale from the Harsh World: How Plants Adapt to Extreme Environments Thomas Dussarrat,Guillaume Decros,Francisca P,Yves Gibon,Claudio Latorreet al. Annual Plant Reviews Online, 2021, 4 (2), pp.551-603. ⟨10.1002/9781119312994.apr0758⟩ Article dans une revue hal-03320839v1
Metabolomics to Exploit the Primed Immune System of Tomato Fruit. Estrella Luna,Amélie Flandin,Cédric Cassan,Sylvain Prigent,Chloé Chevanneet al. Metabolites, 2020, 10 (3), pp.96. ⟨10.3390/metabo10030096⟩ Article dans une revue hal-02629273v1
Regulation of carbon metabolism in two maize sister lines contrasted for chilling tolerance Catalina Duran Garzon,Michelle Lequart-Pillon,Carsten Rautengarten,Solène Bassard,Hélène Sellier-Richardet al. Journal of Experimental Botany, 2020, 71 (1), pp.356-369. ⟨10.1093/jxb/erz421⟩ Article dans une revue hal-02620164v1
Fruit setting rewires central metabolism via gibberellin cascades Yoshihito Shinozaki,Bertrand Beauvoit,Masaru Takahara,Shuhei Hao,Kentaro Ezuraet al. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (38), pp.23970-23981. ⟨10.1073/pnas.2011859117⟩ Article dans une revue hal-02946501v1
Making experimental data tables in the life sciences more FAIR: a pragmatic approach Daniel Jacob,Romain David,Sophie Aubin,Yves Gibon GigaScience, 2020, 9 (12), pp.giaa144. ⟨10.1093/gigascience/giaa144⟩ Article dans une revue hal-02883355v4
Model-assisted comparison of sugar accumulation patterns in ten fleshy fruits highlights differences between herbaceous and woody species Coffi Belmys Cakpo,Gilles Vercambre,Valentina Baldazzi,Léa Roch,Zhanwu Daiet al. Annals of Botany, 2020, 126 (3), pp.455-470. ⟨10.1093/aob/mcaa082⟩ Article dans une revue hal-02749663v1
Transcriptomic and proteomic data in developing tomato fruit Isma Belouah,Camille Bénard,Alisandra Denton,Melisande Blein-Nicolas,Thierry Balliauet al. Data in Brief, 2020, 28, pp.1-8. ⟨10.1016/j.dib.2019.105015⟩ Article dans une revue (data paper) hal-02539392v1
Adenine Nucleotide and Nicotinamide Adenine Dinucleotide Measurements in Plants Youjun Zhang,Ina Krahnert,Antje Bolze,Yves Gibon,Alisdair Fernie Current Protocols in Plant Biology, 2020, 5 (3), pp.e20115. ⟨10.1002/cppb.20115⟩ Article dans une revue hal-02926938v1
Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species Léa Roch,Sylvain Prigent,Holger Klose,Coffi-Belmys Cakpo,Bertrand Beauvoitet al. Journal of Experimental Botany, 2020, 71 (19), pp.5823-5836. ⟨10.1093/jxb/eraa302⟩ Article dans une revue hal-02904041v1
Omics data reveal putative regulators of einkorn grain protein composition under sulfur deficiency Titouan Bonnot,Pierre Martre,Victor Hatte,Mireille Dardevet,Philippe Leroyet al. Plant Physiology, 2020, 183 (2), pp.501-516. ⟨10.1104/pp.19.00842⟩ Article dans une revue hal-02553742v1
Peptide filtering differently affects the performances of XIC-based quantification methods Isma Belouah,Melisande Blein-Nicolas,Thierry Balliau,Yves Gibon,Michel Zivyet al. Journal of Proteomics, 2019, 193, pp.131-141. ⟨10.1016/j.jprot.2018.10.003⟩ Article dans une revue hal-02327322v1
Central Metabolism Is Tuned to the Availability of Oxygen in Developing Melon Fruit Kentaro Mori,Bertrand Beauvoit,Benoit Biais,Maxime Chabane,J. William Allwoodet al. Frontiers in Plant Science, 2019, 10, pp.594. ⟨10.3389/fpls.2019.00594⟩ Article dans une revue hal-02621412v1
Get the Balance Right: ROS Homeostasis and Redox Signalling in Fruit Guillaume Decros,Pierre Baldet,Bertrand Beauvoit,Rebecca Stevens,Amélie Flandinet al. Frontiers in Plant Science, 2019, 10, pp.1-16. ⟨10.3389/fpls.2019.01091⟩ Article dans une revue (article de synthèse) hal-02619141v1
Identification of the Arabidopsis calmodulin-dependent NAD+ kinase that sustains the elicitor-induced oxidative burst Elisa Dell'Aglio,Cécile Giustini,Alexandra Kraut,Yohann Couté,Alex Costaet al. Plant Physiology, 2019, 181 (4), pp.1449-1458. ⟨10.1104/pp.19.00912⟩ Article dans une revue hal-02361156v1
Modeling Protein Destiny in Developing Fruit Isma Belouah,Christine Nazaret,Pierre Pétriacq,Sylvain Prigent,Camille Bénardet al. Plant Physiology, 2019, 180 (3), pp.1709-1724. ⟨10.1104/pp.19.00086⟩ Article dans une revue hal-02327302v1
Omeprazole Treatment Enhances Nitrogen Use Efficiency Through Increased Nitrogen Uptake and Assimilation in Corn. Michael James van Oosten,Emilia Dell'Aversana,Alessandra Ruggiero,Valerio Cirillo,Yves Gibonet al. Frontiers in Plant Science, 2019, 10, pp.1507. ⟨10.3389/fpls.2019.01507⟩ Article dans une revue hal-02628214v1
Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling. Guillaume Decros,Bertrand Beauvoit,Sophie Colombie,Cecile Cabasson,Stéphane Bernillonet al. Frontiers in Plant Science, 2019, 10, pp.1201. ⟨10.3389/fpls.2019.01201⟩ Article dans une revue hal-02620533v1
Fruit salad in the lab: comparing botanical species to help deciphering fruit primary metabolism Léa Roch,Zhanwu Dai,Eric Gomes,Stéphane Bernillon,Jiaojiao Wanget al. Frontiers in Plant Science, inPress, 10, pp.836. ⟨10.3389/fpls.2019.00836⟩ Article dans une revue (article de synthèse) hal-02540096v1
Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers Olivier Fernandez,Maria Urrutia,Thierry Berton,Stéphane Bernillon,Catherine Debordeet al. Metabolomics, 2019, 15 (4), pp.56. ⟨10.1007/s11306-019-1515-4⟩ Article dans une revue hal-02487236v1
Wine yeast phenomics: A standardized fermentation method for assessing quantitative traits of Saccharomyces cerevisiae strains in enological conditions Emilien Peltier,Margaux Bernard,Marine Trujillo,Duyên Prodhomme,Jean-Christophe Barbeet al. PLoS ONE, 2018, 13 (1), pp.1-23. ⟨10.1371/journal.pone.0190094⟩ Article dans une revue hal-02622804v1
Differences in Blossom-end Rot Resistance in Tomato Cultivars is Associated with Total Ascorbate rather than Calcium Concentration in the Distal End Part of Fruits &lt;i&gt;per se&lt;/i&gt; Rached Moalla,Pierre Baldet,Yves Gibon,Chiaki Matsukura,Toru Ariizumiet al. Horticulture Journal, 2018, 87 (3), pp.372-381. ⟨10.2503/hortj.OKD-150⟩ Article dans une revue hal-02621909v1
Corrigendum to &quot;Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination&quot; [Plant Sci. 269 (2018) 118-125] Qiong Xia,Maharajah Ponnaiah,Gwendal Cueff,Loic Rajjou,Duyên Prodhommeet al. Plant Science, 2018, 269, pp.118-125. ⟨10.1016/j.plantsci.2018.05.002⟩ Article dans une revue hal-02621883v1
Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices Emilien Peltier,Vikas Sharma,Maria Marti Raga,Miguel Roncoroni,Margaux Bernardet al. BMC Genomics, 2018, 19 (1), pp.1-20. ⟨10.1186/s12864-018-5145-4⟩ Article dans une revue hal-02620975v1
1H-NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets. Rita Wedeking,Mickael Maucourt,Catherine Deborde,Annick Moing,Yves Gibonet al. PLoS ONE, 2018, 13 (5), pp.e0196102. ⟨10.1371/journal.pone.0196102⟩ Article dans une revue hal-02622637v1
Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination. Qiong Xia,Ponnaiah Maharajah,Gwendal Cueff,Loic Rajjou,Duyên Prodhommeet al. Plant Science, 2018, 269, pp.118-125. ⟨10.1016/j.plantsci.2018.01.014⟩ Article dans une revue hal-02623778v1
Putting primary metabolism into perspective to obtain better fruits Bertrand Beauvoit,Isma Belouah,Nadia Bertin,Coffi Belmys Cakpo,Sophie Colombieet al. Annals of Botany, In press, 122 (1), pp.1-21. ⟨10.1093/aob/mcy057⟩ Article dans une revue hal-02539159v1
CORRECTION: Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modelling Approach to Link Leaf Physiology to Kernel Yield. Rafael Canas-Pendon Canas,Zhazira Yesbergenova-Cuny,Margaret Simons,Fabien Chardon,Patrick P. Armengaudet al. The Plant cell, 2018, 30, pp.946. ⟨10.1105/tpc.18.00273⟩ Article dans une revue hal-02624574v1
Identification and functional study of a mild allele of SlDELLA gene conferring the potential for improved yield in tomato Yoshihito Shinozaki,Kentaro Ezura,Jianhong Hu,Yoshihiro Okabe,Camille Benardet al. Scientific Reports, In press, 8 (1), pp.12043. ⟨10.1038/s41598-018-30502-w⟩ Article dans une revue hal-02536736v1
Constraint-based modeling highlights cell energy, redox status and α-ketoglutarate availability as metabolic drivers for anthocyanin accumulation in grape cells under nitrogen limitation Eric Soubeyrand,Sophie Colombié,Bertrand Beauvoit,Zhanwu Dai,Stéphanie Cluzetet al. Frontiers in Plant Science, 2018, 9, pp.1-14. ⟨10.3389/fpls.2018.00421⟩ Article dans une revue hal-02533089v1
Comparative metabolomics and glycolysis enzyme profiling of embryogenic and nonembryogenic grape cells Jonathan Parrilla,Cécile Gaillard,Jérémy Verbeke,Mickael Maucourt,Radoslav Aleksandrovet al. FEBS Open Bio, 2018, 8 (5), pp.784 - 798. ⟨10.1002/2211-5463.12415⟩ Article dans une revue hal-01891843v1
Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding Nadia Lamari,Vanessa Zhendre,Maria Urrutia,Stéphane Bernillon,Mickael Maucourtet al. Metabolomics, 2018, 14 (10), pp.132. ⟨10.1007/s11306-018-1427-8⟩ Article dans une revue hal-02539641v1
Impacts of &lt;em&gt;Paraburkholderia phytofirmans&lt;/em&gt; Strain PsJN on Tomato (&lt;em&gt;Lycopersicon esculentum&lt;/em&gt; L.) Under High Temperature Alaa Issa,Qassim Esmaeel,Lisa Sanchez,Barbara Courteaux,Jean-Francois Guiseet al. Frontiers in Plant Science, 2018, 9, pp.1397. ⟨10.3389/fpls.2018.01397⟩ Article dans une revue hal-02620887v1
Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield. Rafael Canas-Pendon,Zhazira Yesbergenova-Cuny,Margaret Simons,Fabien Chardon,Patrick Armengaudet al. The Plant cell, 2017, 29 (5), pp.919-943. ⟨10.1105/tpc.16.00613⟩ Article dans une revue hal-01605953v1
Microvine: A New Model to Study Grapevine Growth and Developmental Patterns and their Responses to Elevated Temperature Nathalie Luchaire,Markus Rienth,Charles Romieu,Ajit Nehe,Ratthaphon Chatbanyonget al. American Journal of Enology and Viticulture, 2017, 68 (3), pp.283-292. ⟨10.5344/ajev.2017.16066⟩ Article dans une revue hal-01602636v1
QTL Analyses in Multiple Populations Employed for the Fine Mapping and Identification of Candidate Genes at a Locus Affecting Sugar Accumulation in Melon (Cucumis melo L.). Jason M Argyris,Aurora Díaz,Valentino Ruggieri,Marta Fernández,Torben Jahrmannet al. Frontiers in Plant Science, 2017, 8, pp.1679. ⟨10.3389/fpls.2017.01679⟩ Article dans une revue hal-02628388v1
The role of potassium on maize leaf carbon exportation under drought condition Elsa Martineau,Jean-Christophe Domec,Alexandre Bosc,Masako Dannoura,Yves Gibonet al. Acta Physiologiae Plantarum, 2017, 39 (10), pp.1-13. ⟨10.1007/s11738-017-2515-5⟩ Article dans une revue hal-02625796v1
Measurement of Tricarboxylic Acid Cycle Enzyme Activities in Plants. Rebeca Patricia Omena-Garcia,Wagner L Araújo,Yves Gibon,Alisdair R Fernie,Adriano Nunes-Nesi Methods in Molecular Biology, 2017, 1670, pp.167-182. ⟨10.1007/978-1-4939-7292-0_14⟩ Article dans une revue hal-02620390v1
Bryophyte gas-exchange dynamics along varying hydration status reveal a significant carbonyl sulphide (COS) sink in the dark and COS source in the light Teresa E. Gimeno,Jérôme Ogée,Jessica Royles,Yves Gibon,Jason B. Westet al. New Phytologist, 2017, 215 (3), pp.965-976. ⟨10.1111/nph.14584⟩ Article dans une revue hal-01606784v1
Combined Alternaria dauci infection and water stresses impact carotenoid content of carrot leaves and roots Florent Perrin,Sébastien Huet,Cécile Dubois-Laurent,Yves Gibon,Sylvie Citerneet al. Environmental and Experimental Botany, 2017, 143, pp.125-134. ⟨10.1016/j.envexpbot.2017.09.004⟩ Article dans une revue hal-02053534v1
A new genomic library of melon introgression lines in a cantaloupe genetic background for dissecting desirable agronomical traits Gorka Perpiñá,Cristina Esteras,Yves Y. Gibon,Antonio J Monforte,Belén Picó BMC Plant Biology, 2016, 16 (1), pp.1-21. ⟨10.1186/s12870-016-0842-0⟩ Article dans une revue hal-02640341v1
Correlation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays. David Toubiana,Wentao Xue,Nengyi Zhang,Karl Kremling,Amit Guret al. Frontiers in Plant Science, 2016, 7, pp.1022. ⟨10.3389/fpls.2016.01022⟩ Article dans une revue hal-02632485v1
Respiration climacteric in tomato fruits elucidated by constraint-based modelling. Sophie Colombié,Bertrand Beauvoit,Christine Nazaret,Camille Bénard,Gilles Vercambreet al. New Phytologist, 2016, 213 (4), pp.1726-1739. ⟨10.1111/nph.14301⟩ Article dans une revue hal-01445653v1
Bread wheat (Triticum aestivum L.) grain protein concentration is related to early post-flowering nitrate uptake under putative control of plant satiety level François Taulemesse,Jacques Le Gouis,David Gouache,Yves Y. Gibon,Vincent Allard PLoS ONE, 2016, 11 (2), ⟨10.1371/journal.pone.0149668⟩ Article dans une revue hal-02637335v1
Is change in ovary carbon status a cause or a consequence of maize ovary abortion in water deficit during flowering? Vincent Oury,Cecilio Frois Caldeira,Duyên D. Prodhomme,Jean-Philippe Pichon,Yves Y. Gibonet al. Plant Physiology, 2016, 71 (2), pp.997-1008. ⟨10.1104/pp.15.01130⟩ Article dans une revue hal-02631520v1
Fortune telling: metabolic markers of plant performance Olivier Fernandez,Maria Urrutia,Stéphane Bernillon,Catherine Giauffret,Francois F. Tardieuet al. Metabolomics, 2016, 12 (10), ⟨10.1007/s11306-016-1099-1⟩ Article dans une revue hal-02637624v1
A multi-Ievel omic approach of tomato fruit quality Jiaxin Xu,Laura Pascual-Banuls,Nelly Desplat,Mireille Faurobert,Yves Gibonet al. Acta Horticulturae, 2015, 1099, pp.793-800. ⟨10.17660/ActaHortic.2015.1099.100⟩ Article dans une revue hal-01543456v1
The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Antoaneta V Popova,Saskia Rausch,Michaela Hundertmark,Yves Y. Gibon,Dirk K Hincha Biochimica et Biophysica Acta Proteins and Proteomics, 2015, 1854, pp.1517-1525. ⟨10.1016/j.bbapap.2015.05.002⟩ Article dans une revue hal-02630310v1
Transcriptional and metabolic alternations rebalance wheat grain storage protein accumulation under variable nitrogen and sulfur supply Zhanwu Dai,Anne A. Plessis,Jonathan Vincent,Nathalie N. Duchateau,Alicia Bessonet al. The Plant Journal, 2015, 83 (2), pp.326-343. ⟨10.1111/tpj.12881⟩ Article dans une revue hal-02042399v1
Genome-wide association of carbon and nitrogen metabolism in the maize nested association mapping population. Nengyi Zhang,Yves Y. Gibon,Jason G Wallace,Nicholas Lepak,Pinghua Liet al. Plant Physiology, 2015, 168 (2), pp.575-83. ⟨10.1104/pp.15.00025⟩ Article dans une revue hal-02635325v1
Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping. M C Rebolledo,M Dingkuhn,Brigitte Courtois,Yves Y. Gibon,Anne Clément-Vidalet al. Journal of Experimental Botany, 2015, 66 (18), pp.5555-66. ⟨10.1093/jxb/erv258⟩ Article dans une revue hal-02636970v1
Biochemical characterization of the primary metabolism and antioxidant defence systems of acidic and acidless citrus genotypes during the major stages of fruit growth Julie Oustric,Sandrine Antoine,Jean Giannettini,Yves Gibon,Luro Françoiset al. Acta Physiologiae Plantarum, 2015, 37 (11), pp.228. ⟨10.1007/s11738-015-1982-9⟩ Article dans une revue hal-01291656v1
Short-and long-term effects of carbohydrate limitation on sugar and organic acid accumulation during mandarin fruit growth Sandrine Antoine,Olivier Pailly,Yves Gibon,Luro François,Jérémie Santiniet al. Journal of the Science of Food and Agriculture, 2015, 96 (11), pp.3906-3914. ⟨10.1002/jsfa.7594⟩ Article dans une revue istex hal-01291670v1
Post-flowering nitrate uptake in wheat is controlled by N status at flowering, with a putative major role of root nitrate transporter NRT2.1. François Taulemesse,Jacques Le Gouis,David Gouache,Yves Y. Gibon,Vincent Allard PLoS ONE, 2015, 10 (3), ⟨10.1371/journal.pone.0120291⟩ Article dans une revue hal-02636975v1
Overexpression of plastid transketolase in tobacco results in a thiamine auxotrophic phenotype. Mahdi Khozaei,Stuart Fisk,Tracy Lawson,Yves Y. Gibon,Ronan Sulpiceet al. The Plant cell, 2015, 27 (2), pp.432-47. ⟨10.1105/tpc.114.131011⟩ Article dans une revue hal-02634460v1
Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships. Camille Bénard,Stéphane Bernillon,Benoit Biais,Sonia Osorio,Mickael M. Maucourtet al. Journal of Experimental Botany, 2015, 66 (11), pp.3391-404. ⟨10.1093/jxb/erv151⟩ Article dans une revue hal-02641303v1
Comparative transcriptional profiling analysis of developing melon (Cucumis melo L.) fruit from climacteric and non-climacteric varieties. Montserrat Saladié,Joaquin Canizares,Michael A Phillips,Manuel Rodríguez-Concepción,Christian Larrigaudiereet al. BMC Genomics, 2015, 16, pp.440. ⟨10.1186/s12864-015-1649-3⟩ Article dans une revue hal-02640926v1
Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing Solanum lycopersicum (tomato) fruit. Sophie Colombié,Christine Nazaret,Camille Bénard,Benoît Biais,Virginie Menginet al. The Plant Journal, 2015, 81 (1), pp.24-39. ⟨10.1111/tpj.12685⟩ Article dans une revue hal-01445680v1
Non-structural carbohydrates in woody plants compared among laboratories Audrey G. Quentin,Elizabeth A. Pinkard,Michael G. Ryan,David T. Tissue,L. Scott Baggettet al. Tree Physiology, 2015, 35 (11), pp.1146-1165. ⟨10.1093/treephys/tpv073⟩ Article dans une revue hal-01557364v1
Why measure enzyme activities in the era of systems biology? Mark Stitt,Yves Y. Gibon Trends in Plant Science, 2014, 19 (4), pp.256-65. ⟨10.1016/j.tplants.2013.11.003⟩ Article dans une revue hal-02631238v1
Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize. Jason G Wallace,Peter J Bradbury,Nengyi Zhang,Yves Y. Gibon,Mark Stittet al. PLoS Genetics, 2014, 10 (12), pp.e1004845. ⟨10.1371/journal.pgen.1004845⟩ Article dans une revue hal-02640763v1
Metabolite Profiling and Integrative Modeling Reveal Metabolic Constraints for Carbon Partitioning under Nitrogen-Starvation in the Green Alga Haematococcus pluvialis. Lee Recht,Nadine Töpfer,Albert Batushansky,Noga Sikron,Aliza Zarkaet al. Journal of Biological Chemistry, 2014, 289 (44), pp.30387-30403. ⟨10.1074/jbc.M114.555144⟩ Article dans une revue hal-02639565v1
Model-Assisted Analysis of Sugar Metabolism throughout Tomato Fruit Development Reveals Enzyme and Carrier Properties in Relation to Vacuole Expansion. Bertrand Beauvoit,Sophie Colombié,Antoine Monier,Marie-Hélène Andrieu,Benoit Biaiset al. The Plant cell, 2014, 26 (8), pp.3224-3242. ⟨10.1105/tpc.114.127761⟩ Article dans une revue hal-01058814v1
Why bring post-genomics into the phosphorus-impoverished bush? Yves Y. Gibon Plant, Cell and Environment, 2014, 37 (6), pp.1273-5. ⟨10.1111/pce.12265⟩ Article dans une revue hal-02640750v1
Remarkable reproducibility of enzyme activity profiles in tomato fruits grown under contrasting environments provides a roadmap for studies of fruit metabolism. Benoit Biais,Camille Bénard,Bertrand Beauvoit,Sophie S. Colombie,Duyên D. Prodhommeet al. Plant Physiology, 2014, 164, pp.1204-1221. ⟨10.1104/pp.113.231241⟩ Article dans une revue hal-02639362v1
Ozone affects ascorbate and glutathione biosynthesis as well as amino acid contents in three Euramerican poplar genotypes J. Dumont,S. Keski-Saari,M. Keinanen,D. Cohen,N. Ningreet al. Tree Physiology, 2014, 34 (3), pp.253 - 266. ⟨10.1093/treephys/tpu004⟩ Article dans une revue hal-01555992v1
Metabolic studies in plant organs: don't forget dilution by growth Michel M. Génard,Valentina Baldazzi,Yves Y. Gibon Frontiers in Plant Science, 2014, 5, pp.1-5. ⟨10.3389/fpls.2014.00085⟩ Article dans une revue hal-02636620v1
Profiling sugar metabolism during fruit development in a peach progeny with different fructose-to-glucose ratios. Elsa Desnoues,Yves Y. Gibon,Valentina Baldazzi,Veronique Signoret,Michel M. Génardet al. BMC Plant Biology, 2014, 14 (1), pp.336 : 1-12. ⟨10.1186/s12870-014-0336-x⟩ Article dans une revue hal-02631892v1
Silencing of the tomato Sugar Partitioning Affecting protein (SPA) modifies sink strength through a shift in leaf sugar metabolism. Luisa Bermúdez,Fabiana de Godoy,Pierre Baldet,Diego Demarco,Sonia Osorioet al. The Plant Journal, 2014, 77 (5), pp.676-87. ⟨10.1111/tpj.12418⟩ Article dans une revue hal-02640583v1
Resolving the Role of Plant Glutamate Dehydrogenase: II. Physiological Characterization of Plants Overexpressing the Two Enzyme Subunits Individually or Simultaneously. Therese Tercé-Laforgue,Magali Bedu,Céline Dargel-Graffin,Frédéric Dubois,Yves Gibonet al. Plant and Cell Physiology, 2013, 54 (10), ⟨10.1093/pcp/pct108⟩ Article dans une revue hal-01190621v1
Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment Stéphane Bernillon,Benoit Biais,Catherine Deborde,Mickael M. Maucourt,Cécile Cabassonet al. Metabolomics, 2013, 9 (1), pp.57-77. ⟨10.1007/s11306-012-0429-1⟩ Article dans une revue istex hal-02651407v1
Impact of the carbon and nitrogen supply on relationships and connectivity between metabolism and biomass in a broad panel of Arabidopsis accessions. Ronan Sulpice,Zoran Nikoloski,Hendrik Tschoep,Carla Antonio,Sabrina Kleessenet al. Plant Physiology, 2013, 162 (1), pp.347-63. ⟨10.1104/pp.112.210104⟩ Article dans une revue hal-01066953v1
SlARF4, an auxin response factor involved in the control of sugar metabolism during tomato fruit development Maha Sagar,Christian Chervin,Isabelle Mila,Yanwei Hao,Jean-Paul Roustanet al. Plant Physiology, 2013, 161 (3), pp.1362-1374. ⟨10.1104/pp.113.213843⟩ Article dans une revue hal-02648494v1
Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach Laura Pascual-Banuls,Jiaxin Xu,Benoit Biais,Mickael Maucourt,Patricia Balliaset al. Journal of Experimental Botany, 2013, 64 (18), pp.1-16. ⟨10.1093/jxb/ert349⟩ Article dans une revue hal-01208665v1
A fluorometric assay for trehalose in the picomole range Petronia Carillo,Regina Feil,Yves Y. Gibon,Namiko Satoh-Nagasawa,David Jacksonet al. Plant Methods, 2013, 9 (1), pp.21. ⟨10.1186/1746-4811-9-21⟩ Article dans une revue hal-02645455v1
Stress-induced GSK3 regulates the redox stress response by phosphorylating glucose-6-phosphate dehydrogenase in &lt;em&gt;Arabidopsis&lt;/em&gt; Sylvia Dal Santo,Hansjörg Stampfl,Julia Krasensky,Stefan Kempa,Yves Y. Gibonet al. The Plant cell, 2012, 24 (8), pp.3380-3392. ⟨10.1105/tpc.112.101279⟩ Article dans une revue hal-02647870v1
Characterization of a NADH-dependent glutamate dehydrogenase mutant of [i]Arabidopsis[/i] demonstrates the key role of this enzyme in root carbon and nitrogen metabolism Jean-Xavier J.-X. Fontaine,Therese Tercé-Laforgue,Patrick Armengaud,Gilles Clément,Jean-Pierre Renouet al. The Plant cell, 2012, 24 (10), pp.4044-4065. ⟨10.1105/tpc.112.103689⟩ Article dans une revue hal-01019522v1
The art of growing plants for experimental purposes: a practical guide for the plant biologist Hendrik Poorter,Fabio Fiorani,Max Planck,Uli Schurr,Alex Fincket al. Functional Plant Biology, 2012, 39 (10-11), pp.821-838. ⟨10.1071/FP12028⟩ Article dans une revue hal-02644389v1
Mutagenesis of cysteine 81 prevents dimerization of the APS1 subunit of ADP-glucose pyrophosphorylase and alters diurnal starch turnover in Arabidopsis thaliana leaves Nadja Hädrich,Janneke H.M. Hendriks,Oliver Kötting,Stéphanie Arrivault,Regina Feilet al. The Plant Journal, 2012, 70 (2), pp.231-242. ⟨10.1111/j.1365-313X.2011.04860.x⟩ Article dans une revue hal-02644594v1
Water deficits uncouple growth from photosynthesis, increase C content, and modify the relationships between C and growth in sink organs Bertrand Muller,Florent Pantin,Michel M. Génard,Olivier Turc,Sandra Freixeset al. Journal of Experimental Botany, 2011, 62 (6), pp.1715-1729. ⟨10.1093/jxb/erq438⟩ Article dans une revue hal-02650675v1
Identification of enzyme activity quantitative trait loci in a &lt;em&gt;Solanum lycopersicum&lt;/em&gt; x &lt;em&gt;Solanum pennellii&lt;/em&gt; introgression line population Marie-Caroline Steinhauser,Dirk Steinhauser,Yves Y. Gibon,Marie Bolger,Stéphanie Arrivaultet al. Plant Physiology, 2011, 157 (3), pp.998-1014. ⟨10.1104/pp.111.181594⟩ Article dans une revue hal-02652389v1
Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics Annick Moing,Asaph Aharoni,Benoit Biais,Ilana Rogachev,Sagit Meiret al. New Phytologist, 2011, 190 (3), pp.683-696. ⟨10.1111/j.1469-8137.2010.03626.x⟩ Article dans une revue hal-02644457v1
Use of TILLING and robotised enzyme assays to generate an allelic series of Arabidopsis thaliana mutants with altered ADP-glucose pyrophosphorylase activity Nadja Hädrich,Yves Y. Gibon,Christian Schudoma,Thomas Altmann,John E. Lunnet al. Journal of Plant Physiology, 2011, 168 (12), pp.1395-1405. ⟨10.1016/j.jplph.2011.01.013⟩ Article dans une revue istex hal-02646438v1
Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes Boris Parent,Olivier Turc,Yves Y. Gibon,Francois F. Tardieu Journal of Experimental Botany, 2010, 61 (8), pp.2057-2069. ⟨10.1093/jxb/erq003⟩ Article dans une revue hal-02664371v1
Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen Itsara Pracharoenwattana,Wenxu Zhou,Olivier Keech,Perigio B. Francisco,Thanikan Udomchalothornet al. The Plant Journal, 2010, 62 (5), pp.785-795. ⟨10.1111/j.1365-313X.2010.04189.x⟩ Article dans une revue hal-02663727v1
Arabidopsis plants acclimate to water deficit at low cost through changes of carbon usage: an integrated perspective using growth, metabolite, enzyme, and gene expression analysis Irène Hummel,Florent Pantin,Ronan Sulpice,Maria Piques,Gaelle Rollandet al. Plant Physiology, 2010, 154 (1), pp.357-372. ⟨10.1104/pp.110.157008⟩ Article dans une revue hal-02662264v1
Enzyme activity profiles during fruit development in tomato cultivars and Solanum pennellii Marie-Caroline Steinhauser,Dirk Steinhauser,Karin Koehl,Fernando Carrari,Yves Y. Gibonet al. Plant Physiology, 2010, 153 (1), pp.80-98. ⟨10.1104/pp.110.154336⟩ Article dans une revue hal-02666951v1
Genetic analysis of central carbon metabolism unveils an amino acid substitution that alters maize NAD-dependent isocitrate dehydrogenase activity Nengyi Zhang,Amit Gur,Yves Y. Gibon,Ronan Sulpice,Sherry Flint-Garciaet al. PLoS ONE, 2010, 5 (4), pp.e9991. ⟨10.1371/journal.pone.0009991⟩ Article dans une revue hal-02656778v1
Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato Elodie Mathieu-Rivet,Frederic Gevaudant,Adrien Sicard,Sophie Salar,Phuc Thi Doet al. The Plant Journal, 2010, 62 (5), pp.727 - 741. ⟨10.1111/j.1365-313X.2010.04198.x⟩ Article dans une revue hal-01848369v1
Starch as a major integrator in the regulation of plant growth R. Sulpice,E.-T. Pyl,H. Ishihara,S. Trenkamp,M. Steinfathet al. Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (25), pp.10348-10353. ⟨10.1073/pnas.0903478106⟩ Article dans une revue hal-03321614v1
Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots Patrick Armengaud,Ronan Sulpice,Anthony Miller,Mark Stitt,Anna Amtmannet al. Plant Physiology, 2009, 150 (2), pp.772-785. ⟨10.1104/pp.108.133629⟩ Article dans une revue hal-03321613v1
Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods Yves Y. Gibon,Eva Theresa Pyl,Ronan Sulpice,John E. Lunn,Mélanie Höneet al. Plant, Cell and Environment, 2009, 32 (7), pp.859-874. ⟨10.1111/j.1365-3040.2009.01965.x⟩ Article dans une revue hal-02663846v1
Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy Jan Hannemann,Hendrik Poorter,Björn Usadel,Oliver E. Bläsing,Alex Fincket al. Plant, Cell and Environment, 2009, 32 (9), pp.1185-1200. ⟨10.1111/j.1365-3040.2009.01964.x⟩ Article dans une revue hal-02666866v1
Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis Hendrik Tschoep,Yves Gibon,Petronia Carillo,Patrick Armengaud,Marek Szecowkaet al. Plant, Cell and Environment, 2009, 32 (3), pp.300-318. ⟨10.1111/j.1365-3040.2008.01921.x⟩ Article dans une revue hal-03321612v1
Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis Maria Piques,Waltraud X. Schulze,Melanie Höhne,Björn Usadel,Yves Y. Gibonet al. Molecular Systems Biology, 2009, 5, pp.314 : 1-17. ⟨10.1038/msb.2009.68⟩ Article dans une revue hal-02666439v1
Absence of Symbiotic Leghemoglobins Alters Bacteroid and Plant Cell Differentiation During Development of Lotus japonicus Root Nodules Thomas Ott,John Sullivan,Euan James,Emmanouil Flemetakis,Catrin Güntheret al. Molecular Plant-Microbe Interactions, 2009, 22 (7), pp.800-808. ⟨10.1094/mpmi-22-7-0800⟩ Article dans une revue hal-03321616v1
High-throughput functional assessment of polysaccharide-active enzymes using matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry as exemplified on plant cell wall polysaccharides Edouard Leboeuf,Peter Immerzeel,Yves Gibon,Martin Steup,Markus Pauly Analytical Biochemistry, 2008, 373 (1), pp.9-17. ⟨10.1016/j.ab.2007.10.007⟩ Article dans une revue istex hal-03321607v1
Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana Joost Jb Keurentjes,Ronan Sulpice,Yves Gibon,Marie-Caroline Steinhauser,Jingyuan Fuet al. Genome Biology, 2008, 9 (8), pp.R129. ⟨10.1186/gb-2008-9-8-r129⟩ Article dans une revue hal-03321606v1
Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range Björn Usadel,Oliver Bläsing,Yves Gibon,Fabien Poree,Melanie Höhneet al. Plant, Cell and Environment, 2008, 31 (4), pp.518-547. ⟨10.1111/j.1365-3040.2007.01763.x⟩ Article dans une revue hal-03321608v1
Description and applications of a rapid and sensitive non-radioactive microplate-based assay for maximum and initial activity of D-ribulose-1,5-bisphosphate carboxylase/oxygenase Ronan Sulpice,Hendrik Tschoep,Maria von Korff,Dirk Büssis,Björn Usadelet al. Plant, Cell and Environment, 2007, 30 (9), pp.1163-1175. ⟨10.1111/j.1365-3040.2007.01679.x⟩ Article dans une revue hal-03321604v1
The enigmatic contribution of mitochondrial function in photosynthesis A. Nunes-Nesi,R. Sulpice,Y. Gibon,A. Fernie Journal of Experimental Botany, 2007, 59 (7), pp.1675-1684. ⟨10.1093/jxb/ern002⟩ Article dans une revue hal-03321602v1
Multilevel genomics analysis of carbon signalling during low carbon availability: coordinating the supply and utilisation of carbon in a fluctuating environment Mark Stitt,Yves Gibon,John Lunn,Maria Piques Functional Plant Biology, 2007, 34 (6), pp.526. ⟨10.1071/fp06249⟩ Article dans une revue hal-03321597v1
Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus Rosa Morcuende,Rajendra Bari,Yves Gibon,Wenming Zheng,Bikram Datt Pantet al. Plant, Cell and Environment, 2007, 30 (1), pp.85-112. ⟨10.1111/j.1365-3040.2006.01608.x⟩ Article dans une revue hal-03321598v1
Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings Daniel Osuna,Bjorn Usadel,Rosa Morcuende,Yves Gibon,Oliver Bläsinget al. The Plant Journal, 2007, 49 (3), pp.463-491. ⟨10.1111/j.1365-313x.2006.02979.x⟩ Article dans une revue hal-03321599v1
GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling Jan Huege,Ronan Sulpice,Yves Gibon,Jan Lisec,Karin Koehlet al. Phytochemistry, 2007, 68 (16-18), pp.2258-2272. ⟨10.1016/j.phytochem.2007.03.026⟩ Article dans une revue istex hal-03321603v1
Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function Adriano Nunes-Nesi,Fernando Carrari,Yves Gibon,Ronan Sulpice,Anna Lytovchenkoet al. The Plant Journal, 2007, 50 (6), pp.1093-1106. ⟨10.1111/j.1365-313x.2007.03115.x⟩ Article dans une revue hal-03321601v1
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments Björn Usadel,Axel Nagel,Dirk Steinhauser,Yves Gibon,Oliver Bläsinget al. BMC Bioinformatics, 2006, 7 (1), ⟨10.1186/1471-2105-7-535⟩ Article dans une revue hal-03321595v1
Increased C availability at elevated carbon dioxide concentration improves N assimilation in a legume Alistair Rogers,Yves Gibon,Mark Stitt,Patrick Morgan,Carl Bernacchiet al. Plant, Cell and Environment, 2006, 29 (8), pp.1651-1658. ⟨10.1111/j.1365-3040.2006.01549.x⟩ Article dans une revue hal-03321592v1
Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes Yves Gibon,Bjoern Usadel,Oliver Blaesing,Beate Kamlage,Melanie Hoehneet al. Genome Biology, 2006, 7 (8), pp.R76. ⟨10.1186/gb-2006-7-8-r76⟩ Article dans une revue hal-03321591v1
Variation of Enzyme Activities and Metabolite Levels in 24 Arabidopsis Accessions Growing in Carbon-Limited Conditions Joanna Cross,Maria von Korff,Thomas Altmann,Linda Bartzetko,Ronan Sulpiceet al. Plant Physiology, 2006, 142 (4), pp.1574-1588. ⟨10.1104/pp.106.086629⟩ Article dans une revue hal-03321593v1
Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? E. Ainsworth,A. Rogers,A. Leakey,L. Heady,Y. Gibonet al. Journal of Experimental Botany, 2006, 58 (3), pp.579-591. ⟨10.1093/jxb/erl233⟩ Article dans une revue hal-03321596v1
Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana John E Lunn,Regina Feil,Janneke Hm Hendriks,Yves Gibon,Rosa Morcuendeet al. Biochemical Journal, 2006, 397 (1), pp.139-148. ⟨10.1042/BJ20060083⟩ Article dans une revue hal-00478514v1
Sugars and Circadian Regulation Make Major Contributions to the Global Regulation of Diurnal Gene Expression in Arabidopsis Oliver Bläsing,Yves Gibon,Manuela Günther,Melanie Höhne,Rosa Morcuendeet al. The Plant cell, 2005, 17 (12), pp.3257-3281. ⟨10.1105/tpc.105.035261⟩ Article dans une revue hal-03321589v1
Identification and Characterisation of the α and β Subunits of Succinyl CoA Ligase of Tomato Claudia Studart-Guimarães,Yves Gibon,Nicolás Frankel,Craig Wood,María Inés Zanoret al. Plant Molecular Biology, 2005, 59 (5), pp.781-791. ⟨10.1007/s11103-005-1004-1⟩ Article dans une revue istex hal-03321588v1
Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses Björn Usadel,Axel Nagel,Oliver Thimm,Henning Redestig,Oliver Blaesinget al. Plant Physiology, 2005, 138 (3), pp.1195-1204. ⟨10.1104/pp.105.060459⟩ Article dans une revue hal-03321587v1
GMD@CSB.DB: the Golm Metabolome Database J. Kopka,N. Schauer,S. Krueger,C. Birkemeyer,B. Usadelet al. Bioinformatics, 2005, 21 (8), pp.1635-1638. ⟨10.1093/bioinformatics/bti236⟩ Article dans une revue hal-03321585v1
Metabolite profiling in plant biology: platforms and destinations Joachim Kopka,Alisdair Fernie,Wolfram Weckwerth,Yves Gibon,Mark Stitt Genome Biology, 2004, 5 (6), pp.109. ⟨10.1186/gb-2004-5-6-109⟩ Article dans une revue hal-03321580v1
mapman: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes Oliver Thimm,Oliver Bläsing,Yves Gibon,Axel Nagel,Svenja Meyeret al. The Plant Journal, 2004, 37 (6), pp.914-939. ⟨10.1111/j.1365-313x.2004.02016.x⟩ Article dans une revue hal-03321582v1
Expression of a yeast acetyl CoA hydrolase in the mitochondrion Lilia Bender-Machado,Michael Bäuerlein,Fernando Carrari,Nicolas Schauer,Anna Lytovchenkoet al. Plant Molecular Biology, 2004, 55 (5), pp.645-662. ⟨10.1007/s11103-004-1557-4⟩ Article dans une revue istex hal-03321583v1
A Robot-Based Platform to Measure Multiple Enzyme Activities in Arabidopsis Using a Set of Cycling Assays: Comparison of Changes of Enzyme Activities and Transcript Levels during Diurnal Cycles and in Prolonged Darkness[W] Yves Gibon,Oliver Blaesing,Jan Hannemann,Petronia Carillo,Melanie Höhneet al. The Plant cell, 2004, 16 (12), pp.3304-3325. ⟨10.1105/tpc.104.025973⟩ Article dans une revue hal-03321584v1
ADP-Glucose Pyrophosphorylase Is Activated by Posttranslational Redox-Modification in Response to Light and to Sugars in Leaves of Arabidopsis and Other Plant Species Janneke H.M. Hendriks,Anna Kolbe,Yves Gibon,Mark Stitt,Peter Geigenberger Plant Physiology, 2003, 133 (2), pp.838-849. ⟨10.1104/pp.103.024513⟩ Article dans une revue hal-03321577v1
An assessment of the physiological properties of the so-called compatible solutes using in vitro experiments with leaf discs François Robert Larher,Aziz Aziz,Yves Gibon,Patricia Trotel-Aziz,Ronan Sulpiceet al. Plant Physiology and Biochemistry, 2003, 41 (6-7), pp.657-666. ⟨10.1016/s0981-9428(03)00076-7⟩ Article dans une revue istex hal-03321575v1
Reduced Expression of Aconitase Results in an Enhanced Rate of Photosynthesis and Marked Shifts in Carbon Partitioning in Illuminated Leaves of Wild Species Tomato Fernando Carrari,Adriano Nunes-Nesi,Yves Gibon,Anna Lytovchenko,Marcelo Ehlers Loureiroet al. Plant Physiology, 2003, 133 (3), pp.1322-1335. ⟨10.1104/pp.103.026716⟩ Article dans une revue hal-03321578v1
Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system Yves Gibon,Helene Vigeolas,Axel Tiessen,Peter Geigenberger,Mark Stitt The Plant Journal, 2002, 30 (2), pp.221-235. ⟨10.1046/j.1365-313x.2001.01278.x⟩ Article dans une revue hal-03321314v1
Interaction between exogenous glycine betaine and the photorespiratory pathway in canola leaf discs Ronan Sulpice,Yves Gibon,Gabriel Cornic,François Robert Larher Physiologia Plantarum, 2002, 116 (4), pp.460-467. ⟨10.1034/j.1399-3054.2002.1160404.x⟩ Article dans une revue hal-03321574v1
Starch Synthesis in Potato Tubers Is Regulated by Post-Translational Redox Modification of ADP-Glucose Pyrophosphorylase Axel Tiessen,Janneke Hendriks,Mark Stitt,Anja Branscheid,Yves Gibonet al. The Plant cell, 2002, 14 (9), pp.2191-2213. ⟨10.1105/tpc.003640⟩ Article dans une revue hal-03321573v1
Metabolic Activity Decreases as an Adaptive Response to Low Internal Oxygen in Growing Potato Tubers P. Geigenberger,A.R. Fernie,Y. Gibon,M. Christ,M. Stitt Biological Chemistry, 2000, 381 (8), ⟨10.1515/bc.2000.093⟩ Article dans une revue istex hal-03321303v1
Proline accumulation in canola leaf discs subjected to osmotic stress is related to the loss of chlorophylls and to the decrease of mitochondrial activity Yves Gibon,Ronan Sulpice,Francois Larher Physiologia Plantarum, 2000, 110 (4), pp.469-476. ⟨10.1111/j.1399-3054.2000.1100407.x⟩ Article dans une revue istex hal-03321313v1
A Single-Step Purification for Glycine Betaine Determination in Plant Extracts by Isocratic HPLC Marie-Anne Bessieres,Yves Gibon,Jean Claude Lefeuvre,François Larher Journal of Agricultural and Food Chemistry, 1999, 47 (9), pp.3718-3722. ⟨10.1021/jf990031h⟩ Article dans une revue istex hal-03321310v1
Exogenously supplied glycine betaine in spinach and rapeseed leaf discs: compatibility or non-compatibility? R. Sulpice,Y. Gibon,A. Bouchereau,F. Larher Plant, Cell and Environment, 1998, 21 (12), pp.1285-1292. ⟨10.1046/j.1365-3040.1998.00362.x⟩ Article dans une revue hal-03321309v1
Is glycine betaine a non-compatible solute in higher plants that do not accumulate it? Y. Gibon,M. Bessieres,F. Larher Plant, Cell and Environment, 1997, 20 (3), pp.329-340. ⟨10.1046/j.1365-3040.1997.d01-82.x⟩ Article dans une revue hal-03321306v1
Cycling Assay for Nicotinamide Adenine Dinucleotides: NaCl Precipitation and Ethanol Solubilization of the Reduced Tetrazolium Yves Gibon,François Larher Analytical Biochemistry, 1997, 251 (2), pp.153-157. ⟨10.1006/abio.1997.2283⟩ Article dans une revue istex hal-03321307v1

Poster de conférence (74)

CABiosE : Comparative Analyses of Biostimulant Effects on tomato crops and their associated microbiota, under water stress conditions. Marine Honoré,Cecile Cabasson,Pierre Joly,Pierre Pétriacq,Sophie Colombieet al. 17émes journées scientifiques du RFMF, Jun 2025, Paris, France Poster de conférence hal-05190283v1
1H-NMR profiling of eggplant and pepper fruits during their development Catherine Deborde,Léa Roch,Daniel Jacob,Anaïs Clavé,Marguerite Batsaleet al. 17èmes Journées Scientifiques du RFMF, Jun 2025, Paris, France Poster de conférence hal-05190161v1
Predictive metabolomic to decipher plant eco-evolutive tendencies Cathleen Mirande-Ney,Santiago Trueba,Yves Gibon,Sylvain Prigent Journées Ouvertes Biologie, Informatique, Mathématiques (JOBIM2025), Jul 2025, Bordeaux, France Poster de conférence hal-05166151v1
MetaboHUB – Bordeaux Metabolome Facility Claudia Rouveyrol,Millena C. Barros Santos,David Benaben,Yohann Boutté,Cecile Cabassonet al. Metabolomics 2024, Jun 2024, Osaka, Japan. ⟨10.15454/1.5572412770331912E12⟩ Poster de conférence hal-05194981v1
Unveiling the Impact of Biostimulant Application on Tomato Metabolism through a metabolomics strategy Cathleen Mirande-Ney,Nicolas Guibert,Millena Cristina Barros Santos,Adam Rochepeau,Théo Poucetet al. 16ème journées scientifiques du RFMF, Jun 2024, Saint malo, France Poster de conférence hal-04677506v1
Tutti frutti: Metabolomics Meets Machine Learning for Juicy Discoveries Sylvain Prigent,Millena C. Barros Santos,Giovanni Melandri,Georges Randriafanomezantsoa Radohery,Cédric Cassanet al. JOBIM 2024 - Journées ouvertes en Biologie, Informatique et Mathématiques, Jun 2024, Toulouse, France Poster de conférence hal-04677398v1
The UNTWIST project: Unraveling Stress Response Mechanisms in Camelina sativa for Enhanced Crop Resilience in European Agriculture Malo Le Boulch,Cédric Cassan,Pierre Pétriacq,Yves Gibon,Sylvain Prigent JOBIM 2024 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2024, Toulouse, France Poster de conférence hal-04677424v1
Using metabolomics and predictive metabolomic to study the physiology of an old rustic oilseed plant. Malo Le Boulch,Millena C. Barros Santos,Susana Silvestre,Dominik Grosskinsky,Anaïs da Costaet al. Metabolomics 2023, Jun 2023, Niagara falls, Canada Poster de conférence hal-04396004v1
Chemistry at the service of Plant Science to decipher Plant Metabolism Millena C. Barros Santos,David Benaben,Cecile Cabasson,Cédric Cassan,Jean-Marc Deogratiaset al. 1st Chemistry Biology Interface Day (CBID), Nov 2023, Pessac, France Poster de conférence hal-05194945v1
Presence/absence variations and SNPs equally contribute to the variations of protein and metabolite abundance Yacine Djabali,Melisande Blein-Nicolas,Annick Moing,Jorge Duarte,Stéphane Bernillonet al. Congrès Analytics 2022, Sep 2022, Nantes, France. Poster de conférence hal-03879730v1
Using machine-learning on metabolomics data to predict complex phenotypes Sylvain Prigent,Yves Gibon JOBIM2022, Jul 2022, Rennes, France Poster de conférence hal-03760581v1
The PHYTOSTIM Project (2021-2025): Toward an integrative Analysis of Phytostimulant Mode of Action and Acceptance Cecile Cabasson,Nicolas Guibert,Sabri Najaï,Joana Jorly,C. Eyssanet al. XII International Agriculture Symposium "AGROSYM 2021", Oct 2021, Sarajevo, Bosnia and Herzegovina. pp.P80, Agrosym 2021 - Book of proceedings Poster de conférence hal-03383359v1
Presence/absence variations and SNPs equally contribute to the variations of protein and metabolite abundance Yacine Djabali,Mélisande Blein,Annick Moing,Jorge Duarte,Thierry Bertonet al. 63rd Annual Maize Genetics Meeting, Mar 2021, Online, United States Poster de conférence hal-03368764v1
MetaboHUB-Bordeaux Stéphane Bernillon,Cecile Cabasson,Cédric Cassan,Grégory da Costa,Catherine Debordeet al. Journées Scientifiques INRA-BAP, Sep 2019, Hyères, France. , 2019 Poster de conférence hal-02570809v1
Leaf metabolite profiling reveals biochemical diversities within wheat genetic resources Pierre Petriacq,Amélie Flandin,Sylvain Prigent,Stéphane Bernillon,Cédric Cassanet al. 15. Annual Conference of the Metabolomics Society (Metabolomics 2019), Jun 2019, La Hague, Netherlands. , pp.209-209, 2019, METABOLOMICS 2019, 15th Annual Conference of the Metabolomics Society, June 23-27, The Hague, Netherlands Poster de conférence hal-02936725v1
NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets Rita Wedeking,Mickael Maucourt,Catherine Deborde,Annick Moing,Yves Gibonet al. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany. 2019 Poster de conférence hal-02556922v1
Modeling from functioning of a grape berry to the whole plant Zhanwu Dai,Jinliang Chen,Junqi Zhu,Michel Genard,Bertrand Beauvoitet al. 21st GiESCO International Meeting "A Multidisciplinary Vision towards Sustainable Viticulture", Jun 2019, Thessalonique, Greece. , 2019, A Multidisciplinary Vision towards Sustainable Viticulture Poster de conférence hal-03420427v1
Grain abortion under drought in maize: expansive growth and hydraulics also matter Olivier Turc,Vincent Oury,Yves Gibon,Duyên Prodhomme,Francois Tardieuet al. 60. Maize Genetics Conference, Mar 2018, Saint-Malo, France. , 2018 Poster de conférence hal-02738086v1
A multi-level modelling framework for simulating grape growth and biochemical compositions under genotype x environment interactions Jinliang Chen,Junqi Zhu,Benjamin Tiffon-Terrade,Michel Génard,Bertrand Beauvoitet al. 12. International Conference on Grapevine Breeding and Genetics, Jul 2018, Bordeaux, France. ISHS-International Society for Horticultural Science, Acta Horticulturae, 2018 Poster de conférence hal-02736966v1
Combined metabolomic and proteomic profiling of maize leaf to reveal metabolic responses to cold temperatures Maria Urrutia,Melisande Blein-Nicolas,Stéphane Bernillon,Catherine Deborde,Mickaël Maucourtet al. 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P25, 2018, 11. Journées Scientifiques du RFMF Poster de conférence hal-03125712v1
Primary metabolism investigation of fleshy fruit species using 1H-NMR profiling Léa Roch,Coffi Belmys Cakpo,Catherine Deborde,Mickael Maucourt,Thierry Bertonet al. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018 Poster de conférence hal-02737961v1
Yield maintenance under drought: expansive growth and hydraulics also matter in reproductive organs Olivier Turc,Vincent Oury,Yves Gibon,Duyên Prodhomme,Francois Tardieu Interdrought V, Feb 2017, Hyderabad, India. 2017 Poster de conférence hal-01605905v1
Central carbon metabolism and anthocyanin biosynthesis in grape berry Zhanwu Dai,Jing Wu,Yves Gibon,Ghislaine Hilbert,Messa Meddaret al. 4. International Conference on Plant Metabolism, Jul 2017, Dalian, China. 2017 Poster de conférence hal-02736097v1
Are metabolic traits markers of the plant response to virus infection? A phenotype and genotype study in Arabidopsis thaliana in response to TuMV (Turnip mosaic virus) in a natural environment Bernadette Rubio,Patrick Cosson,Mélodie Caballero,Frederic Revers,Yves Gibonet al. 16. Rencontres de Virologie Végétale (RVV 2017), Jan 2017, Aussois, France. 2017 Poster de conférence hal-01603260v1
Comparative study of primary metabolite patterns in diverse fleshy fruit species Léa Roch,C B Cakpo,Thierry Berton,Stéphane Bernillon,Stéphanie Arrivaultet al. MetaboMeeting, Dec 2017, Birmingham (UK), United Kingdom Poster de conférence hal-04955742v1
Multiscale Fruit Modeling: integrating biophysical fruit growth with biochemical metabolisms in 10 fruits Zhanwu Dai,Bertrand Beauvoit,Sophie Colombie,Michel Génard,Gilles Vercambreet al. 2. Annual Crops in silico Symposium and Workshop, Jun 2017, Oxford, United Kingdom. 2017 Poster de conférence hal-02735987v1
Tomato cultivars with high resistance to blossom-end rot show a greater antioxidant capacity prior to symptom appearance Rached Moalla,Pierre Baldet,Yves Gibon,Chiaki Matsukura,Tohru Ariizumiet al. 14. Solanaceae and 3. Cucurbitaceae Genomics Joint Conference - Solcuc2017, Sep 2017, Valencia, Spain. 2017 Poster de conférence hal-02734102v1
Physiological Analysis of Buds Dormancy in Sweet Cherry Rémi Beauvieux,Bénédicte Wenden,Camille Benard,Hélène Christmann,Yves Gibonet al. Plant and Animal Genome XXV, Jan 2017, San Diego, United States. 2017 Poster de conférence hal-01603066v1
Combining LCMS data from two years for plant performance biomarkers discovery Maria Urrutia Rosauro,Stéphane Bernillon,Nadia Lamari,Mickael M. Maucourt,Patricia Balliaset al. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016 Poster de conférence hal-02742089v1
Yield reduction under high temperature is paired with a low carbon status in microvine Nathalie Luchaire,Laurent Torregrosa,Yves Gibon,Markus Rienth,Charles Romieuet al. 10. International Symposium on Grapevine Physiology and Biotechnology, Jun 2016, Verone, Italy. 2016 Poster de conférence hal-02793305v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillon,Thierry Bertonet al. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016 Poster de conférence hal-02743906v1
Metabolites analysis of flower buds during dormancy in sweet cherry Rémi Beauvieux,Bénédicte B. Wenden,Camille Bénard,Hélène Christmann,Yves Y. Gibonet al. 8. International Rosaceae Genomics Conference (RGC8), Jun 2016, Angers, France. 2016 Poster de conférence hal-02739660v1
The timing of shifts in the transcriptome and proteome in relation to metabolic state during tomato fruit development Isma Belouah,Thierry Balliau,Camille Benard,Bertrand Beauvoit,Sophie Colombieet al. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, Ireland. , 2016 Poster de conférence hal-01603579v1
Searching for marker metabolites of crop performance Annick Moing,Maria Urrutia,Olivier Fernandez,Vanessa Zhendre,Nadia Lamariet al. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016 Poster de conférence hal-02744241v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillon,Thierry Bertonet al. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, Ireland. 2016 Poster de conférence hal-02741696v1
How to optimize metabolites concentrations and fluxes in a metabolic pathway? Backgrounds and Basics Christine Nazaret,Sophie Colombié,Bertrand Beauvoit,Martine Dieuaide-Noubhani,Jean-Pierre Mazatet al. International Study Group for Systems Biology meeting (ISGSB 2016) , Oct 2016, Jena, Germany. Poster de conférence hal-01445608v1
Interaction between the enzymes of central carbon metabolism and anthocyanin biosynthesis during grape berry development Zhanwu Dai,Jing Wu,Yves Gibon,Ghislaine Hilbert,Messa Meddaret al. Macromolecules and Secondary Metabolites of Grapevine and Wine - Macrowine 2016, Jun 2016, Changins, Switzerland. 2016 Poster de conférence hal-02744264v1
Characterization of a plant cell suspension culture of Vitis vinifera: biomass composition assessment before C13-metabolic flux analysis Angela Machado Vieira,Stéphanie Cluzet,Catherine Deborde,Ghislaine Hilbert,Annick Moinget al. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016 Poster de conférence hal-02741756v1
Metabolic profiles and viral charge genome wide mapping in Arabidopsis thaliana in response to TuMV (Turnip mosaic virus) in a natural environment Bernadette Rubio,Patrick Cosson,Mélodie Caballero,Frederic Revers,Yves Gibonet al. 20. General Congress of EUCARPIA "Plant breeding: the art of bringing science to life", Aug 2016, Zurich, Switzerland. , Abstracts Poster de conférence hal-02953367v1
Modelling metabolic fluxes during tomato fruit development Sophie Colombie,Bertrand Beauvoit,Christine Nazaret,Camille Benard,Martine Dieuaide Noubhaniet al. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 Poster de conférence hal-01601445v1
Cold treatment affects the metabolite profiles of maize leaves Nadia Lamari,Vanessa Zhendre,Stéphane Bernillon,Mickael M. Maucourt,Catherine Debordeet al. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02742488v1
Combining MS and proton NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism Léa Roch,Stéphane Bernillon,Mickael Maucourt,Catherine Deborde,Camille Benardet al. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 - Book of abstracts Poster de conférence hal-01606414v1
Towards improved fruit set efficiency using tomato genetic resources Tohru Ariizumi,Y Shinozaki,Y Okabe,K Hoshikawa,M Shikataet al. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 Poster de conférence hal-01604671v1
Combining MS and NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism Léa Roch,Stéphane Bernillon,Mickael M. Maucourt,Catherine Deborde,Camille Bénardet al. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02739251v1
Primary metabolism intermediates of two tomato leaf tissues in contrasted light intensity conditions Stéphane Bernillon,Stéphanie Arrivault,Manuela Guenther,Regina Feil,Patricia Balliaset al. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02740588v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications. Annick Moing,Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillonet al. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02743630v1
Consequences of high temperatures and drought on peach fruit production strongly depends on their period of occurence Fatima Adra,Gilles Vercambre,Daniel Plénet,Benedicte Bakan,Agathe Nobletet al. ISHS International Symposium, INNOHORT, Jun 2015, Avignon, France. 2015, Innovation in Integrated & Organic Horticulture Poster de conférence hal-01608225v1
&lt;em&gt;Arabidopsis thaliana&lt;/em&gt; susceptibility to TuMV (&lt;em&gt;Turnip mosaic virus&lt;/em&gt;) in natural environment: mapping loci involved in viral charge and preliminary results on associated metabolic profiles Bernadette Rubio,Patrick Cosson,Mélodie Caballero,Frederic Revers,Yves Y. Gibonet al. 15. Rencontres de Virologie Végétale (RVV), Jan 2015, Aussois, France. 2015 Poster de conférence hal-02797938v1
Suppression of ADP-glucose pyrophosphorylase genes affects fruit skin thickness as well as fruit sugar and sugar phosphate contents in tomato (Solanum lycopersicum L.) H Suzuki,M Sato,S Nonaka,Yves Gibon,Christophe Rothanet al. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 Poster de conférence hal-01602128v1
Assessment of metabolome compartmentation changes during tomato leaf development using nonaqueous fractionation Clémence de Jaham,Benjamin Thiombiano,Camille Benard,A. P. Alonso,J. C. Cocuronet al. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 - Book of abstracts Poster de conférence hal-01603745v1
XEML Interactive designer Benjamin Dartigues,Kenny Biliau,Cécile Cabasson,Yves Gibon,Joachim Kopkaet al. Bordeaux Computational Biology and Bioinformatics, Nov 2014, Bordeaux, France. , 1 p., 2014 Poster de conférence hal-01203290v1
Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB IA project. Tools and Applications Annick Moing,Catherine Deborde,Patricia Ballias,Camille Bénard,Stéphane Bernillonet al. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014 Poster de conférence hal-02799366v1
Metabolomic analyses in sweet cherry José Quero-Garcia,Guillaume Lalanne-Tisne,Virginie Cocureau,José Antonio Campoy,Yves Y. Gibonet al. 7. International Rosaceae Genomics Conference, Jun 2014, Seattle, United States. 2014 Poster de conférence hal-02792223v1
Integrative analysis of metabolite and enzyme profiles in ripening grape berries in response to source-sink modulation Zhanwu Z. Dai,Natalia Bobeica,John Edward Lunn,Regina Feil,Ghislaine Hilbertet al. 3. Annual Conference of the COST ACTION QUALITYFRUIT, Sep 2014, Chania, Greece. 2014, Book of abstracts Poster de conférence hal-02740512v1
Development of recombinant sub-NILs containing smaller introgressions of QTL SC5-1 determined to be involved in the accumulation of sugar via MAS and high throughput SNP genotyping Jason M. Argyris,Jordi Garcia-Mas,Torben Jahrmann,Marta Fernández,Belén Picóet al. Cucurbitaceae 2014, Oct 2014, Bay Harbor, United States. 2014 Poster de conférence hal-02799217v1
Flux Balance Analysis metabolic modelling highlights cell energy and redox status as a metabolic driver for anthocyanin accumulation in grapevine GT3 cells under nitrogen starvation E. Soubeyrand,Sophie S. Colombie,Zhanwu Z. Dai,S. Cluzet,Ghislaine Hilbertet al. ICP 2014 - XXVIIth International Conference on Polyphenols, Sep 2014, Nagoya, Japan. 2014 Poster de conférence hal-02792547v1
Combining metabolite and enzymatic profiling during tomato fruit development Mickael M. Maucourt,Camille Bénard,Benoit Biais,Patricia Ballias,Catherine Debordeet al. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014 Poster de conférence hal-02793996v1
Hit-Me: high throughput metabolic phenotyping in PHENOME! Camille Bénard,Duyên D. Prodhomme,Patricia Ballias,Yves Y. Gibon EPSO Workshop, Jun 2014, Dublin, Ireland. 2014 Poster de conférence hal-02792062v1
Flux balance analysis highlights cell energy and redox status as metabolic drivers for anthocyanin accumulation in grapevine GT3 cells under nitrogen starvation Eric Soubeyrand,Sophie Colombie,Zhanwu Dai,Stéphanie Cluzet,Ghislaine Hilbertet al. Macrowine 2014, Sep 2014, Stellenbosch, South Africa. 2014 Poster de conférence hal-02739299v1
Towards a system biology approach of the effect of different levels of nitrogen supply on anthocyanin accumulation in grapevine cell suspensions Eric Soubeyrand,Sophie S. Colombie,Isabelle Merlin,Ghislaine Hilbert,Bertrand Beauvoitet al. Plant Biology 2013, Jul 2013, Rhode Island, United States. 2013 Poster de conférence hal-02804615v1
Kinetic modelling of the metabolism and compartmentation of sugars during tomato fruit development Bertrand Beauvoit,Sophie S. Colombie,Christine Nazaret,Marie-Hélène Andrieu,Martine Dieuaide Noubhaniet al. Metabolic Pathway Analysis 2013, Sep 2013, Oxford, United Kingdom. 2013 Poster de conférence hal-02809066v1
On-going method developments in Bordeaux Metabolome Facility Stéphane Bernillon,Benoit Biais,Catherine Deborde,Laetitia Fouillen,Yvon Guntzet al. Metabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jun 2013, Glasgow, United Kingdom. 2013 Poster de conférence hal-02804388v1
Influence of diurnal factor on compositional changes of tomato fruit and leaf Camille Benard,Stéphane Bernillon,Sonia Osorio-Algar,Mickael M. Maucourt,Benoit Biaiset al. 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013 Poster de conférence hal-02805301v1
A systems biology approach for the effect of nitrogen supply on anthocyanin accumulation in grapevine cell suspensions Eric Soubeyrand,Sophie S. Colombie,Isabelle Merlin,Ghislaine Hilbert,Bertrand Beauvoitet al. 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013 Poster de conférence hal-02810027v1
Towards a FSPM of bud outgrowth for rosebush: experimental analysis of sugar effect Jessica Bertheloot,François Barbier,Yves Y. Gibon,Rachid Boumaza,Soulaiman Sakret al. 7 th International Conference on Functional- Structural Plant Models, Jun 2013, Saarisalkä, Finland. Finnish Society of Forest Science, 2013 Poster de conférence hal-02748594v1
Coordinated methodological developments for plant metabolomics at Bordeaux Stéphane Bernillon,Benoit Biais,Catherine Deborde,Laetitia Fouillen,Yvon Guntzet al. 7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique, Jun 2013, Amiens, France. 2013 Poster de conférence hal-02810760v1
Identification and characterization of two new transcription factors implicated in tomato fruit development Martine Lemaire Lemaire-Chamley,Julien Assali,Joana Jorly,Guillaume G. Menard,Yves Y. Gibonet al. COST Action FA1106 "QualityFruit" - 2 nd Annual Conference Fleshy Fruit Development & Ripening, Sep 2013, Chania, Greece. 2013 Poster de conférence hal-02803787v1
Seed abortion of maize under water deficit is linked to a developmental process and not to carbon deprivation Vincent Oury,Duyên D. Prodhomme,Yves Y. Gibon,Francois F. Tardieu,Olivier Turc Interdrought IV Conference, Sep 2013, Perth, Australia. 2013 Poster de conférence hal-02745394v1
Compositional changes in fruit pericarp of water-stressed tomato in greenhouse Annick Moing,Benoit Biais,Mickael M. Maucourt,Camille Benard,Patricia Balliaset al. Metabolomics 2012, Jun 2012, Washington, United States. 1 p., 2012 Poster de conférence hal-02805488v1
Comparison of metabolomic, proteomic and genomic variability in tomato fruit Mathilde M. Causse,Jiaxin Xu,Laura Pascual,Yves Y. Gibon,Annick Moinget al. 9. Solanaceae Conference (SOL2012), Aug 2012, Neuchâtel, Switzerland. 2012, SOL 2012: From the Bench to Innovative Applications Poster de conférence hal-02745839v1
High or low fructose? Consequences for sugar metabolism in peach fruit Elsa Desnoues,Yves Y. Gibon,Valentina Baldazzi,Veronique Signoret,Michel M. Génardet al. 6. Rosaceous Genomics Conference, Sep 2012, San Michele all’Adige, Italy. 1 p., 2012 Poster de conférence hal-02804340v1
A simple model of tomato metabolism Bertrand Beauvoit,Benoit Biais,Sophie S. Colombie,Martine Dieuaide,Yves Y. Gibonet al. International Study Group for Systems Biology, Sep 2012, Ameland, Netherlands. 2012 Poster de conférence hal-02806898v1
Diurnal compositional changes in pericarp of tomato fruit Camille Bénard,Benoit Biais,Stéphane Bernillon,Mickael M. Maucourt,Sonia Osorio-Algaret al. Metabomeeting 2011, Sep 2011, Helsinki, Finland. , 1 p., 2011 Poster de conférence hal-02747463v1
A role for Carbon metabolism in leaf growth response to soil water deficit ? An integrated perspective Irène Hummel,Florent Pantin,Ronan Sulpice,Gaelle Rolland,Maria Piqueset al. 20. International Conference on Arabidopsis Research (ICAR), Jun 2009, Edinburgh, United Kingdom. 2009 Poster de conférence hal-02757475v1

Chapitre d'ouvrage (10)

Developmental metabolomics to decipher and improve fleshy fruit quality J. William Allwood,Yves Gibon,Sonia Osorio,Wagner Araújo,José Vallarinoet al. Elsevier. Plant Metabolomics in full swing, 98, 2021, Advances in Botanical Research, 978-0-12-821688-0. ⟨10.1016/bs.abr.2020.09.016⟩ Chapitre d'ouvrage hal-03121970v1
Plant metabolomics and breeding Olivier Fernandez,Emilie Millet,Renaud Rincent,Sylvain Prigent,Pierre Pétriacqet al. Elsevier. Plant Metabolomics in full swing, 98, 2021, Advances in Botanical Research, 978-0-12-821688-0. ⟨10.1016/bs.abr.2020.09.020⟩ Chapitre d'ouvrage hal-03150312v1
Untargeted Analysis of Semipolar Compounds by LC-MS and Targeted Analysis of Fatty Acids by GC-MS/GC-FID: From Plant Cultivation to Extract Preparation Camille Benard,Sébastien Acket,Yannick Rossez,Olivier Fernandez,Thierry Bertonet al. Plant Metabolomics, 1778, Springer Science + Business Media B.V., pp.101-124, 2018, Methods in Molecular Biology, 978-1-4939-7818-2. ⟨10.1007/978-1-4939-7819-9_8⟩ Chapitre d'ouvrage hal-01972166v1
Measurement of Enzyme Activities and Optimization of Continuous and Discontinuous Assays Camille Benard,Yves Gibon Current Protocols in Plant Biology, John Wiley and Sons Inc, 2016, 9781119077367. ⟨10.1002/cppb.20003⟩ Chapitre d'ouvrage hal-01605777v1
Analysis of enzyme activities Guillaume G. Menard,Benoit Biais,Duyên D. Prodhomme,Patricia Ballias,Yves Y. Gibon Plant Metabolic Flux Analysis : Methods and Protocols, 1090, Springer Science+Business Media, 2014, Methods in Molecular Biology, 978-1-62703-687-0. ⟨10.1007/978-1-62703-688-7_15⟩ Chapitre d'ouvrage hal-02799530v1
High-throughput biochemical phenotyping for plants Guillaume G. Menard,Benoit Biais,Duyên D. Prodhomme,Patricia Ballias,Johann J. Petitet al. Metabolomics coming of age with its technological diversity, 67 (1ère éd.), Elsevier Ltd, 693 p., 2013, Advances in Botanical Research, 978-0-12-397922-3. ⟨10.1016/B978-0-12-397922-3.00009-5⟩ Chapitre d'ouvrage hal-02811316v1
Aspects of experimental design for plant metabolomics experiments and guidelines for growth of plant material Yves Y. Gibon,Dominique D. Rolin Plant metabolomics : Methods and protocols, 860, Springer Science+Business Media, 340 p., 2012, Methods in Molecular Biology, 978-1-61779-593-0. ⟨10.1007/978-1-61779-594-7⟩ Chapitre d'ouvrage hal-02803292v1
Aspects of experimental design for plant metabolomics experiments and guidelines for growth of plant material Yves Gibon,Dominique Rolin Plant metabolomics : Methods and protocols, 860, Springer Science+Business Media, 340 p., 2012, Methods in Molecular Biology, 978-1-61779-593-0 Chapitre d'ouvrage hal-02928423v1
New opportunities in metabolomics biochemical phenotyping for plant systems biology Yves Y. Gibon,Dominique D. Rolin,Catherine Deborde,Stéphane Bernillon,Annick Moing Metabolomics, InTech, 2012, 978-953-51-0046-1 Chapitre d'ouvrage hal-02804473v1
Enzyme Kinetics: Theory and Practice Alistair Rogers,Yves Gibon Plant Metabolic Networks, Springer New York, pp.71-103, 2009, ⟨10.1007/978-0-387-78745-9_4⟩ Chapitre d'ouvrage hal-03321610v1

Pré-publication, Document de travail (4)

From fruit growth to ripening in plantain: a careful balance between carbohydrate synthesis and breakdown N.A. Campos,Sophie Colombie,Annick Moing,Cédric Cassan,D. Amahet al. 2021 Pré-publication, Document de travail hal-03659204v1
Combinatory therapy targeting mitochondrial oxidative phosphorylation improves efficacy of IDH mutant inhibitors in acute myeloid leukemia Lucille Stuani,Marie Sabatier,Feng Wang,Nathalie Poupin,Claudie Boscet al. 2020 Pré-publication, Document de travail hal-02935177v1
Matériel et Méthode thèse Léa ROCH (VF) Léa Roch,Catherine Deborde,Annick Moing,Yves Gibon 2016 Pré-publication, Document de travail hal-04760180v1
Association mapping across numerous traits reveals patterns of functional variation in maize Jason Wallace,Peter Bradbury,Nengyi Zhang,Yves Y. Gibon,Mark Stittet al. 2014 Pré-publication, Document de travail (working paper) hal-02797919v1

Vidéo (2)

Présentation de l'unité Biologie du fruit et pathologie (BFP) Coline Verneau,Aurélien Marquot,Yves Gibon 2024 Vidéo hal-05421073v1
Presentation of BFP research unit Coline Verneau,Aurélien Marquot,Yves Gibon 2024 Vidéo hal-05421106v1