Zehra Esra Ilhan

Identifiants chercheurs

IdHAL :

zehra-esra-ilhan

ORCID :

0000-0002-3387-9424

Publications

Article dans une revue (35)

Associations between the gut microbiota at one-year and neurodevelopment in children from the SEPAGES cohort Aline Davias,Sarah Lyon-Caen,Nina Iszatt,Celine Monot,Yamina Rayahet al. Brain, Behavior & Immunity - Health, 2025, 48, pp.101063. ⟨10.1016/j.bbih.2025.101063⟩ Article dans une revue hal-05273171v1
Associations between pre- and post-natal exposure to phthalate and DINCH metabolites and gut microbiota in one-year old children Aline Davias,Sarah Lyon-Caen,Matthieu Rolland,Nina Iszatt,Cathrine Thomsenet al. Environmental Pollution, 2024, 363, pp.125204. ⟨10.1016/j.envpol.2024.125204⟩ Article dans une revue hal-04816223v1
Longitudinal exposure to antiseizure medications shape gut-derived microbiome, resistome, and metabolome landscape Camille Dop,Stéphane Auvin,Stanislas Mondot,Patricia Lepage,Zehra Esra Ilhan ISME Communications, 2024, 4 (1), ⟨10.1093/ismeco/ycae123⟩ Article dans une revue hal-04776452v1
Identifying biodegradation pathways of cetrimonium bromide (CTAB) using metagenome, metatranscriptome, and metabolome tri-omics integration Chen-Wei Zheng,Yi-Hao Luo,Yen-Jung Sean Lai,Zehra Esra Ilhan,Aura Ontiveros-Valenciaet al. Water Research, 2023, 246, pp.120738. ⟨10.1016/j.watres.2023.120738⟩ Article dans une revue hal-04297122v1
Long-Term Continuous Test of H 2 -Induced Denitrification Catalyzed by Palladium Nanoparticles in a Biofilm Matrix Jie Cheng,Min Long,Chen Zhou,Zehra-Esra Ilhan,Diana Calvoet al. Environmental Science and Technology, 2023, 57 (32), pp 11948-11957. ⟨10.1021/acs.est.3c01268⟩ Article dans une revue hal-04334062v1
Occurrence of Neonatal Necrotizing Enterocolitis in Premature Neonates and Gut Microbiota: A Case–Control Prospective Multicenter Study Julio Aires,Zehra Esra Ilhan,Lancelot Nicolas,Laurent Ferraris,Johanne Delannoyet al. Microorganisms, 2023, 11 (10), pp 2457. ⟨10.3390/microorganisms11102457⟩ Article dans une revue hal-04241268v1
Organic carbon metabolism is a main determinant of hydrogen demand and dynamics in anaerobic soils Megan Meinel,Anca Delgado,Zehra Esra Ilhan,Marisol Luna Aguero,Samuel Aguiaret al. Chemosphere, 2022, 303 (1), pp.134877. ⟨10.1016/j.chemosphere.2022.134877⟩ Article dans une revue hal-04297109v1
Exposure to anti-seizure medications impact growth of gut bacterial species and subsequent host response Zehra Esra Ilhan,Vincent Brochard,Nicolas Lapaque,Stéphane Auvin,Patricia Lepage Neurobiology of Disease, 2022, 167, pp.105664. ⟨10.1016/j.nbd.2022.105664⟩ Article dans une revue hal-03954506v1
Surgical Menopause and Estrogen Therapy Modulate the Gut Microbiota, Obesity Markers, and Spatial Memory in Rats Lydia Zeibich,Stephanie V Koebele,Victoria E Bernaud,Zehra Esra Ilhan,Blake Dirkset al. Frontiers in Cellular and Infection Microbiology, 2021, 11, ⟨10.3389/fcimb.2021.702628⟩ Article dans une revue hal-04334077v1
Increased expression of antibiotic-resistance genes in biofilm communities upon exposure to cetyltrimethylammonium bromide (CTAB) and other stress conditions Yi-Hao Luo,Yenjung Sean Lai,Chenwei Zheng,Zehra Esra Ilhan,Aura Ontiveros-Valenciaet al. Science of the Total Environment, 2021, 765, pp.144264. ⟨10.1016/j.scitotenv.2020.144264⟩ Article dans une revue hal-04334080v1
Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery Zehra Esra Ilhan,John K Dibaise,Sydney E Dautel,Nancy G Isern,Young-Mo Kimet al. npj Biofilms and Microbiomes, 2020, 6 (1), pp.12. ⟨10.1038/s41522-020-0122-5⟩ Article dans une revue hal-04335789v1
Integrative and quantitative bioenergetics: Design of a study to assess the impact of the gut microbiome on host energy balance Karen Corbin,Rosa Krajmalnik-Brown,Elvis Carnero,Christopher Bock,Rita Emersonet al. Contemporary Clinical Trials Communications, 2020, 19, pp.100646. ⟨10.1016/j.conctc.2020.100646⟩ Article dans une revue hal-03351349v1
MicroNiche: an R package for assessing microbial niche breadth and overlap from amplicon sequencing data D R Finn,J Yu,Z E Ilhan,V M C Fernandes,C R Pentonet al. FEMS Microbiology Ecology, 2020, 96 (8), ⟨10.1093/femsec/fiaa131⟩ Article dans une revue hal-04335754v1
The microbiome and gynaecological cancer development, prevention and therapy Paweł Łaniewski,Zehra Esra Ilhan,Melissa Herbst-Kralovetz Nature Reviews Urology, 2020, 17 (4), pp.232-250. ⟨10.1038/s41585-020-0286-z⟩ Article dans une revue hal-04335776v1
Deciphering the complex interplay between microbiota, HPV, inflammation and cancer through cervicovaginal metabolic profiling Zehra Esra Ilhan,Paweł Łaniewski,Natalie Thomas,Denise J Roe,Dana M Chaseet al. EBioMedicine, 2019, 44, pp.675-690. ⟨10.1016/j.ebiom.2019.04.028⟩ Article dans une revue hal-04335797v1
Differences in fecal microbial metabolites and microbiota of children with autism spectrum disorders Dae-Wook Kang,Zehra Esra Ilhan,Nancy Isern,David Hoyt,Daniel Howsmonet al. Anaerobe, 2018, 49, pp.121-131. ⟨10.1016/j.anaerobe.2017.12.007⟩ Article dans une revue hal-04335814v1
Microbiota–drug interactions: Impact on metabolism and efficacy of therapeutics Ellen Wilkinson,Zehra Esra Ilhan,Melissa Herbst-Kralovetz Maturitas, 2018, 112, pp.53-63. ⟨10.1016/j.maturitas.2018.03.012⟩ Article dans une revue hal-04335800v1
Complete dechlorination and mineralization of pentachlorophenol (PCP) in a hydrogen-based membrane biofilm reactor (MBfR) Min Long,Zehra Esra Ilhan,Siqing Xia,Chen Zhou,Bruce Rittmann Water Research, 2018, 144, pp.134-144. ⟨10.1016/j.watres.2018.06.071⟩ Article dans une revue hal-04335738v1
pH-Mediated Microbial and Metabolic Interactions in Fecal Enrichment Cultures Zehra Esra Ilhan,Andrew K Marcus,Dae-Wook Kang,Bruce E Rittmann,Rosa Krajmalnik-Brown MSphere, 2017, 2 (3), ⟨10.1128/mSphere⟩ Article dans une revue hal-04335936v1
Enhancing biodegradation of C16-alkyl quaternary ammonium compounds using an oxygen-based membrane biofilm reactor Yenjung Sean Lai,Aura Ontiveros-Valencia,Zehra Esra Ilhan,Yun Zhou,Evelyn Mirandaet al. Water Research, 2017, 123, pp.825-833. ⟨10.1016/j.watres.2017.07.003⟩ Article dans une revue hal-04335851v1
Insights into Butyrate Production in a Controlled Fermentation System via Gene Predictions S. Esquivel-Elizondo,Z. E. Ilhan,E. Garcia-Peña,R. Krajmalnik-Brown mSystems, 2017, 2 (4), ⟨10.1128/msystems.00051-17⟩ Article dans une revue hal-04678867v1
Insights into Butyrate Production in a Controlled Fermentation System via Gene Predictions S. Esquivel-Elizondo,Z E Ilhan,E I Garcia-Peña,R. Krajmalnik-Brown mSystems, 2017, 2 (4), ⟨10.1128/mSystems.00051-17.⟩ Article dans une revue hal-04335916v1
Total electron acceptor loading and composition affect hexavalent uranium reduction and microbial community structure in a membrane biofilm reactor Aura Ontiveros-Valencia,Chen Zhou,Zehra Esra Ilhan,Louis Cornette de Saint Cyr,Rosa Krajmalnik-Brownet al. Water Research, 2017, 125, pp.341-349. ⟨10.1016/j.watres.2017.08.060⟩ Article dans une revue hal-04335843v1
Distinctive microbiomes and metabolites linked with weight loss after gastric bypass, but not gastric banding Zehra Esra Ilhan,John Dibaise,Nancy Isern,David Hoyt,Andrew Marcuset al. The International Society of Microbiologial Ecology Journal, 2017, 11 (9), pp.2047-2058. ⟨10.1038/ismej.2017.71⟩ Article dans une revue hal-04678889v1
Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease Timothy Sampson,Justine Debelius,Taren Thron,Stefan Janssen,Gauri Shastriet al. Cell, 2016, 167 (6), pp.1469-1480.e12. ⟨10.1016/j.cell.2016.11.018⟩ Article dans une revue hal-04678869v1
Gut microbial and short-chain fatty acid profiles in adults with chronic constipation before and after treatment with lubiprostone Dae-Wook Kang,John Dibaise,Zehra Esra Ilhan,Michael Crowell,Jai Ram Rideoutet al. Anaerobe, 2015, 33, pp.33-41. ⟨10.1016/j.anaerobe.2015.01.005⟩ Article dans une revue hal-04678863v1
The source of inoculum plays a defining role in the development of MEC microbial consortia fed with acetic and propionic acid mixtures Vianey Ruiz,Zehra Esra Ilhan,Dae-Wook Kang,Rosa Krajmalnik-Brown,Germán Buitrón Journal of Biotechnology, 2014, 182-183, pp.11-18. ⟨10.1016/j.jbiotec.2014.04.016⟩ Article dans une revue hal-04336424v1
Effects of Multiple Electron Acceptors on Microbial Interactions in a Hydrogen-Based Biofilm He-Ping Zhao,Zehra Esra Ilhan,Aura Ontiveros-Valencia,Youneng Tang,Bruce Rittmannet al. Environmental Science and Technology, 2013, 47 (13), pp. 7396-7403. ⟨10.1021/es401310j⟩ Article dans une revue hal-04297110v1
Reduced Incidence of Prevotella and Other Fermenters in Intestinal Microflora of Autistic Children Dae-Wook Kang,Jin Gyoon Park,Zehra Esra Ilhan,Garrick Wallstrom,Joshua Labaeret al. PLoS ONE, 2013, 8 (7), pp.e68322. ⟨10.1371/journal.pone.0068322⟩ Article dans une revue hal-04297115v1
Using a Two-Stage Hydrogen-Based Membrane Biofilm Reactor (MBfR) to Achieve Complete Perchlorate Reduction in the Presence of Nitrate and Sulfate He-Ping Zhao,Aura Ontiveros-Valencia,Youneng Tang,Zehra Esra Ilhan,Rosa Krajmalnik-Brownet al. Environmental Science and Technology, 2013, 47 (3), pp. 1565-1572. ⟨10.1021/es303823n⟩ Article dans une revue hal-04297104v1
Phylogenetic analysis of nitrate- and sulfate-reducing bacteria in a hydrogen-fed biofilm Aura Ontiveros-Valencia,Zehra Esra Ilhan,Dae-Wook Kang,Bruce Rittmann,Rosa Krajmalnik-Brown FEMS Microbiology Ecology, 2013, 85 (1), pp. 158-167. ⟨10.1111/1574-6941.12107⟩ Article dans une revue hal-04297107v1
Effects of Gut Microbes on Nutrient Absorption and Energy Regulation Rosa Krajmalnik-Brown,Zehra‐esra Ilhan,Dae‐wook Kang,John Dibaise Nutrition in Clinical Practice, 2012, 27 (2), pp.201-214. ⟨10.1177/0884533611436116⟩ Article dans une revue hal-04336415v1
Herbicide and Antibiotic Removal by Woodchip Denitrification Filters: Sorption Processes Z. Esra Ilhan,Say Kee Ong,Thomas Moorman Water, Air, and Soil Pollution, 2011, 223 (5), pp. 2651-2662. ⟨10.1007/s11270-011-1057-5⟩ Article dans une revue istex hal-04297099v1
Dissipation of Atrazine, Enrofloxacin, and Sulfamethazine in Wood Chip Bioreactors and Impact on Denitrification Z. Ilhan,S. Ong,T. Moorman Journal of Environmental Quality, 2011, 40 (6), pp.1816-1823. ⟨10.2134/jeq2011.0082⟩ Article dans une revue hal-04336410v1
Herbicide and Antibiotic Removal by Woodchip Denitrification Filters: Sorption Processes Z. Esra Ilhan,Say Kee Ong,Thomas Moorman Water, Air, and Soil Pollution, 2011, 223 (5), pp.2651-2662. ⟨10.1007/s11270-011-1057-5⟩ Article dans une revue istex hal-04336420v1

Communication dans un congrès (1)

Chronic exposure to antiseizure drugs impacts the gut microbiome community and function Camille Dop,Stéphane Auvin,Patricia Lepage,Zehra Esra Ilhan 15TH SEEON CONFERENCE, Jun 2023, Seeon Monastery, Germany, Germany Communication dans un congrès hal-04296650v1

Poster de conférence (5)

Longitudinal exposure to antiseizure medications shapes gut-derived microbiome composition, resistome, and metabolome Camille Dop,Stéphane Auvin,Patricia Lepage,Zehra Esra Ilhan ISME19 (19th International Symposium on Microbial Ecology), Aug 2024, Cape Town / Le Cap, South Africa Poster de conférence hal-04680478v1
Members of the gut microbiota modulate the bioavailability of the antiseizure medication lamotrigine Zehra Esra Ilhan,Catherine Philippe,Andrea Marchetto,Philippe Gérard,Stéphane Auvinet al. 19th International Symposium on Microbial Ecology, Aug 2024, Cape Town / Le Cap, South Africa Poster de conférence hal-04678898v1
Chronic exposure to antiseizure drugs impacts the gut microbiota community and function. Camille Dop,Stéphane Auvin,Patricia Lepage,Zehra Esra Ilhan 3rd International Conference on Microbial Ecotoxicology-EcotoxicoMic, Nov 2022, Montpellier (FRANCE), France Poster de conférence hal-04296248v1
Parabens impact interactions among key bacterial members of the early-life gut microbiome Zehra Esra Ilhan,Marie Aerts,Patricia Lepage 3rd International Conference on Microbial Ecotoxicology, Nov 2022, Montpellier, France Poster de conférence hal-04679185v1
Bi-directional interactions between anti-seizure medications and gut microbial communities mediate host drug response Zehra Esra Ilhan,Vincent Brochard,Catherine Philippe,Nicolas Lapaque,Stéphane Auvinet al. 18th International Symposium on Microbial Ecology, ISME18, Aug 2022, Lausanne, Switzerland Poster de conférence hal-04338203v1

Chapitre d'ouvrage (1)

Microbial Drug Interactions and Human Health Zehra Esra Ilhan,Melissa Herbst-Kralovetz Metabolism of Nutrients by Gut Microbiota, The Royal Society of Chemistry, pp.120-149, 2022, ⟨10.1039/9781839160950-00120⟩ Chapitre d'ouvrage hal-04334073v1

Article de blog scientifique (2)

What happens to microbes after bariatric surgery? Zehra Esra Ilhan 2020 Article de blog scientifique hal-04679193v1
Streptococcus Zehra Esra Ilhan 2016 Article de blog scientifique hal-04679205v1

Brevet (1)

Microbiome markers and therapies for autism spectrum disorders Rosa Krajmalnik-Brown,Dae-Wook Kang,Jin Gyoon Park,Joshua Labaer,Zehra Esra Ilhan United States, Patent n° : 11542560. 2018 Brevet hal-04678910v1

Thèse (1)

Microbiome After Bariatric Surgery and Microbial Insights into Surgical Weight Loss Zehra Esra Ilhan Life Sciences [q-bio]. Arizona State University, 2016. English. ⟨NNT : ⟩ Thèse tel-04338142v1