Julien Pirrello

52
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Publications

Publications

Ethylene‐MPK8‐ERF.C1‐PR module confers resistance against Botrytis cinerea in tomato fruit without compromising ripening

Heng Deng , Yangang Pei , Xin Xu , Xiaofei Du , Qihan Xue et al.
New Phytologist, 2024, 242 (2), pp.592-609. ⟨10.1111/nph.19632⟩
Article dans une revue hal-04639780 v1

Ploidy‐specific transcriptomes shed light on the heterogeneous identity and metabolism of developing tomato pericarp cells

Edouard Tourdot , Pascal G.P. Martin , Elie Maza , Jean-Philippe Mauxion , Anis Djari et al.
The Plant Journal, 2024, 118 (4), pp.997-1015. ⟨10.1111/tpj.16646⟩
Article dans une revue hal-04530411 v1
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Class I TCP in fruit development: much more than growth

Yushuo Gao , Farid Regad , Zhengguo Li , Julien Pirrello , Mondher Bouzayen et al.
Frontiers in Plant Science, 2024, 15, pp.1411341. ⟨10.3389/fpls.2024.1411341⟩
Article dans une revue hal-04639797 v1
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A distal enhancer guides the negative selection of toxic glycoalkaloids during tomato domestication

Feng Bai , Peng Shu , Heng Deng , Yi Wu , Yao Chen et al.
Nature Communications, 2024, 15 (1), pp.2894. ⟨10.1038/s41467-024-47292-7⟩
Article dans une revue hal-04639825 v1
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Haplotype-resolved genome assembly and implementation of VitExpress, an open interactive transcriptomic platform for grapevine

Anis Djari , Guillaume Madignier , Olivia Di Valentin , Thibaul Gille , Pierre Frasse et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (23), pp.e2403750121. ⟨10.1073/pnas.24037501211of10⟩
Article dans une revue hal-04641800 v1

A transcriptional cascade mediated by two APETALA2 family members orchestrates carotenoid biosynthesis in tomato

Xiaoqing He , Kaidong Liu , Yi Wu , Weijie Xu , Ruochen Wang et al.
Journal of Integrative Plant Biology, 2024, 66 (6), pp.1227-1241. ⟨10.1111/jipb.13650⟩
Article dans une revue hal-04641817 v1

Bifunctional transcription factors SlERF.H5 and H7 activate cell wall and repress gibberellin biosynthesis genes in tomato via a conserved motif

Yangang Pei , Qihan Xue , Peng Shu , Weijie Xu , Xiaofei Du et al.
Developmental Cell, 2024, 59 (10), pp.1345-1359.e6. ⟨10.1016/j.devcel.2024.03.006⟩
Article dans une revue hal-04641871 v1
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Selenium Biofortification Impacts the Tomato Fruit Metabolome and Transcriptional Profile at Ripening

Anton Shiriaev , Stefano Brizzolara , Carlo Sorce , Gaia Meoni , Chiara Vergata et al.
Journal of Agricultural and Food Chemistry, 2023, 71 (36), pp.13554-13565. ⟨10.1021/acs.jafc.3c02031⟩
Article dans une revue hal-04639713 v1
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Identification of SRS transcription factor family in Solanum lycopersicum, and functional characterization of their responses to hormones and abiotic stresses

Wang Lu , Yan Wang , Yuan Shi , Qin Liang , Xiangyin Lu et al.
BMC Plant Biology, 2023, 23 (1), pp.495. ⟨10.1186/s12870-023-04506-2⟩
Article dans une revue hal-04639745 v1

SlERF.F12 modulates the transition to ripening in tomato fruit by recruiting the co-repressor TOPLESS and histone deacetylases to repress key ripening genes

Heng Deng , Yao Chen , Ziyu Liu , Zhaoqiao Liu , Peng Shu et al.
The Plant cell, In press, ⟨10.1093/plcell/koac025⟩
Article dans une revue hal-03612159 v1
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Transition to ripening in tomato requires hormone-controlled genetic reprogramming initiated in gel tissue

Ximena Chirinos , Shiyu Ying , Maria Aurineide Rodrigues , Elie Maza , Anis Djari et al.
Plant Physiology, 2022, 191 (1), pp.610-625. ⟨10.1093/plphys/kiac464⟩
Article dans une revue hal-03840120 v1
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Interaction of two MADS-box genes leads to growth phenotype divergence of all-flesh type of tomatoes

Baowen Huang , Guojian Hu , Keke Wang , Pierre Frasse , Elie Maza et al.
Nature Communications, 2021, 12, pp.6892. ⟨10.1038/s41467-021-27117-7⟩
Article dans une revue hal-03464505 v1
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Ethylene response factors regulate expression of HbSUT3, the sucrose influx carrier in laticifers of Hevea brasiliensis

Yi Zhang , Lusheng Xin , Julien Pirrello , Yongjun Fang , Jianghua Yang et al.
Tree Physiology, 2021, 41 (7), pp.1278-1288. ⟨10.1093/treephys/tpaa179⟩
Article dans une revue hal-03423923 v1

Integrative analyses of metabolome and genome‐wide transcriptome reveal the regulatory network governing flavor formation in kiwifruit ( Actinidia chinensis )

Ruochen Wang , Peng Shu , Chi Zhang , Junlin Zhang , Ya Chen et al.
New Phytologist, In press, ⟨10.1111/nph.17618⟩
Article dans une revue hal-03322343 v1
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Roles of RIN and ethylene in tomato fruit ripening and ripening‐associated traits

Shan Li , Benzhong Zhu , Julien Pirrello , Changjie Xu , Bo Zhang et al.
New Phytologist, 2020, 226 (2), pp.460-475. ⟨10.1111/nph.16362⟩
Article dans une revue hal-02619662 v1

Like Heterochromatin Protein 1b represses fruit ripening via regulating the H3K27me3 levels in ripening‐related genes in tomato

Qi Liang , Heng Deng , Yuxiang Li , Ziyu Liu , Peng Shu et al.
New Phytologist, 2020, 227 (2), pp.485-497. ⟨10.1111/nph.16550⟩
Article dans une revue hal-02614813 v1

MaXB3 Modulates MaNAC2, MaACS1, and MaACO1 Stability to Repress Ethylene Biosynthesis during Banana Fruit Ripening

Wei Shan , Jian-Fei Kuang , Wei Wei , Zhong-Qi Fan , Wei Deng et al.
Plant Physiology, 2020, 184 (2), pp.1153-1171. ⟨10.1104/pp.20.00313⟩
Article dans une revue hal-02962147 v1
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Overexpression of bHLH95, a basic helix–loop–helix transcription factor family member, impacts trichome formation via regulating gibberellin biosynthesis in tomato

Yao Chen , Dan Su , Jie Li , Shiyu Ying , Heng Deng et al.
Journal of Experimental Botany, 2020, 71 (12), pp.3450-3462. ⟨10.1093/jxb/eraa114⟩
Article dans une revue hal-02916187 v1

The RIN ‐regulated Small Auxin‐Up RNA SAUR 69 is involved in the unripe‐to‐ripe phase transition of tomato fruit via enhancement of the sensitivity to ethylene

Jun‐hye Shin , Isabelle Mila , Mingchun Liu , Maria Aurineide Rodrigues , Teva Vernoux et al.
New Phytologist, 2019, 222 (2), pp.820-836. ⟨10.1111/nph.15618⟩
Article dans une revue hal-02386613 v1

A novel tomato F-box protein, SlEBF3, is involved in tuning ethylene signaling during plant development and climacteric fruit ripening

Heng Deng , Julien Pirrello , Yao Chen , Nan Li , Sihua Zhu et al.
The Plant Journal, 2018, 95 (4), pp.648-658. ⟨10.1111/tpj.13976⟩
Article dans une revue hal-02621089 v1

Ethylene Response Factors (ERF) are differentially regulated by different abiotic stress types in tomato plants

Imen Klay , Sandra Gouia , Mingchun Liu , Isabelle Mila , Habib Khoudi et al.
Plant Science, 2018, 274, pp.137-145. ⟨10.1016/j.plantsci.2018.05.023⟩
Article dans une revue hal-02626871 v1
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Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how the global shift in expression ascribed to DNA ploidy influences RNA-Seq data normalization and interpretation

Julien Pirrello , Cynthia Deluche , Nathalie Frangne , Frederic Gevaudant , Elie Maza et al.
The Plant Journal, 2018, 93 (2), pp.387--398. ⟨10.1111/tpj.13783⟩
Article dans une revue hal-02183254 v1

Molecular cloning and characterization of novel WIN1/SHN1 ethylene responsive transcription factor HvSHN1 in barley ( <em>Hordeum vulgare</em> L.)

Rania Djemal , Isabelle Mila , Mondher Bouzayen , Julien Pirrello , Habib Khoudi
Journal of Plant Physiology, 2018, 228, pp.39-46. ⟨10.1016/j.jplph.2018.04.019⟩
Article dans une revue hal-02621382 v1

The tomato Ethylene Response Factor Sl-ERF.B3 integrates ethylene and auxin signaling via direct regulation of <em>Sl-Aux</em>/IAA27

Mingchun Liu , Yao Chen , Ya Chen , Jun Hye Shin , Isabelle Mila et al.
New Phytologist, 2018, 219 (2), pp.631-640. ⟨10.1111/nph.15165⟩
Article dans une revue hal-02626490 v1
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TomExpress, a unified tomato RNA-Seq platform for visualization of expression data, clustering and correlation networks

Mohammed Zouine , Elie Maza , Anis Djari , Mattieu Lauvernier , Pierre Frasse et al.
The Plant Journal, 2017, vol. 92 (n° 4), ⟨10.1111/tpj.13711⟩
Article dans une revue hal-01607612 v1
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Comprehensive Profiling of Ethylene Response Factor Expression Identifies Ripening-Associated ERF Genes and Their Link to Key Regulators of Fruit Ripening in Tomato

Mingchun Liu , Bruna Lima-Gomes , Isabelle Mila , Eduardo Purgatto , Lázaro Eustáquio Pereira Peres et al.
Plant Physiology, 2016, vol. 170 (n°3), pp. 1732-1744. ⟨10.1104/pp.15.01859⟩
Article dans une revue hal-01494971 v1

Identification and functional characterization of two HOOKLESS genes in tomato (<em>Solanum lycopersicum</em>)

Salma Chaabouni , Julien Pirrello , Mingchun Liu , Islam El-Sharkawy , Jean-Paul Roustan et al.
Journal of Plant Physiology, 2016, 200, pp.76-81. ⟨10.1016/j.jplph.2016.05.017⟩
Article dans une revue hal-02630583 v1
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Ethylene response factors are controlled by multiple harvesting stresses in hevea brasiliensis

Riza-Arief Putranto , Cuifang Duan , Kuswanhadi Kuswanhadi , Tetty Chaidamsari , Maryannick Rio et al.
PLoS ONE, 2015, 10 (4), pp.e0123618. ⟨10.1371/journal.pone.0123618⟩
Article dans une revue hal-01494937 v1

Ethylene control of fruit ripening: revisiting the complex network of transcriptional regulation

Mingchun Liu , Julien Pirrello , Christian Chervin , Jean-Paul Roustan , Mondher Bouzayen
Plant Physiology, 2015, 169 (4), pp.2380-2390. ⟨10.1104/pp.15.01361⟩
Article dans une revue hal-02636936 v1

Identification and functional characterization of ten AP2/ERF genes in potato

Donia Bouaziz , Mariam Charfeddine , Rania Jbir , Mohamed Najib Saïdi , Julien Pirrello et al.
Plant Cell, Tissue and Organ Culture, 2015, 123 (1), pp.155-172. ⟨10.1007/s11240-015-0823-2⟩
Article dans une revue hal-02632203 v1
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Involvement of Ethylene in the Latex Metabolism and Tapping Panel Dryness of Hevea brasiliensis

Riza-Arief Putranto , Eva Herlinawati , Maryannick Rio , Julie Leclercq , Piyanuch Piyatrakul et al.
International Journal of Molecular Sciences, 2015, 16 (8), pp.17885-17908. ⟨10.3390/ijms160817885⟩
Article dans une revue hal-01264334 v1
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TdERF1, an ethylene response factor associated with dehydration responses in durum wheat (Triticum turgidum L. subsp. durum)

Emna Makhloufi , Fatma-Ezzahra Yousfi , Julien Pirrello , Anne Bernadac , Abdelwahed Ghorbel et al.
Plant Signaling and Behavior, 2015, 10 (10), pp.1-4. ⟨10.1080/15592324.2015.1065366⟩
Article dans une revue hal-01244794 v1

Endoreduplication and fruit growth in tomato: evidence in favour of the karyoplasmic ratio theory

Christian Chevalier , Matthieu Bourdon , Julien Pirrello , Catherine Cheniclet , Frederic Gevaudant et al.
Journal of Experimental Botany, 2014, 65 (10), pp.2731-2746. ⟨10.1093/jxb/ert366⟩
Article dans une revue hal-02635318 v1
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The chimeric repressor version of an Ethylene Response Factor(ERF) family member, Sl-ERF.B3, shows contrasting effects on tomato fruit ripening

Mingchun Liu , Gianfranco Diretto , Julien Pirrello , Jean-Paul Roustan , Zhengguo Li et al.
New Phytologist, 2014, 203 (1), pp.206-218. ⟨10.1111/nph.12771⟩
Article dans une revue hal-02632475 v1
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Ethylene response factor Sl-ERFB3 is responsive to abiotic stresses and mediates salt and cold stress response regulation in tomato

Imen Klay , Julien Pirrello , Leila Riahi , Anne Bernadac , Ameur Cherif et al.
The Scientific World Journal, 2014, pp.1-12. ⟨10.1155/2014/167681⟩
Article dans une revue hal-02635750 v1

How fruit developmental biology makes use of flow cytometry approaches.

Julien Pirrello , Matthieu Bourdon , Catherine Cheniclet , Mickaël Bourge , Spencer C Brown et al.
Cytometry Part A, 2014, 85A, pp.115-125. ⟨10.1002/cyto.a.22417⟩
Article dans une revue hal-02632820 v1
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A dominant repressor version of the tomatoSl-ERF.B3gene confers ethylene hypersensitivity via feedback regulation of ethylene signaling and response components

Mingchun Liu , Julien Pirrello , Ravi Kesari , Isabelle Mila , Jean-Paul Roustan et al.
The Plant Journal, 2013, Vol. 73 (3), pp. 406-419. ⟨10.1111/tpj.12305⟩
Article dans une revue hal-00906407 v1
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Overexpression of StDREB1 Transcription Factor Increases Tolerance to Salt in Transgenic Potato Plants

Donia Bouaziz , Julien Pirrello , Mariam Charfeddine , Asma Hammami , Rania Jbir et al.
Molecular Biotechnology, 2013, vol. 54 (n° 3), pp. 803-817. ⟨10.1007/s12033-012-9628-2⟩
Article dans une revue hal-01142439 v1
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The structural and molecular analysis of endoreduplicated nuclei in tomato (Solanum lycopersicum) fruit provides evidence for a ploidy-dependent increase in transcriptional activity

Julien Pirrello , Matthieu Bourdon , Catherine Cheniclet , Olivier Coriton , Mickaël Bourge et al.
Plant Biotechnology, 2013, 30 (3), pp.301-307. ⟨10.5511/plantbiotechnology.13.0319b⟩
Article dans une revue hal-01208676 v1

Evidence for karyoplasmic homeostasis during endoreduplication and a ploidy-dependent increase in gene transcription during tomato fruit growth.

Matthieu Bourdon , Julien Pirrello , Catherine Cheniclet , Olivier Coriton , Mickaël Bourge et al.
Development (Cambridge, England), 2012, 139 (20), pp.3817-26. ⟨10.1242/dev.084053⟩
Article dans une revue hal-00855581 v1
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Ectopic expression of dehydration responsive element binding proteins (StDREB2) confers higher tolerance to salt stress in potato

Donia Bouaziz , Julien Pirrello , Hela Ben Amor , Asma Hammami , Mariam Charfeddine et al.
Plant Physiology and Biochemistry, 2012, vol. 60, pp. 98-108. ⟨10.1016/j.plaphy.2012.07.029⟩
Article dans une revue hal-00994149 v1
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Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene

Julien Pirrello , Narasimha Prasad , Wangshu Zhang , Kunsong Chen , Isabelle Mila et al.
BMC Plant Biology, 2012, vol. 12, pp. 190-220. ⟨10.1186/1471-2229-12-190⟩
Article dans une revue hal-00800373 v1

In planta quantification of endoreduplication using fluorescent in situ hybridization (FISH).

Matthieu Bourdon , Olivier Coriton , Julien Pirrello , Catherine Cheniclet , Spencer C Brown et al.
The Plant Journal, 2011, 66 (6), pp.1089-99. ⟨10.1111/j.1365-313X.2011.04568.x⟩
Article dans une revue hal-00855934 v1
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Silencing Sl-EBF1 and Sl-EBF2 expression causes constitutive ethylene response phenotype, accelerated plant senescence, and fruit ripening in tomato

Yingwu Yang , Yu Wu , Julien Pirrello , Farid Regad , Mondher Bouzayen et al.
Journal of Experimental Botany, 2010, 61 (3), pp.697-708. ⟨10.1093/jxb/erp332⟩
Article dans une revue hal-03556734 v1
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Regulation of tomato fruit ripening

Julien Pirrello , Farid Regad , Alain Latché , Jean-Claude Pech , Mondher Bouzayen
CAB Reviews, 2009, 4 (51), pp.1 -14. ⟨10.1079/PAVSNNR20094051⟩
Article dans une revue hal-04501268 v1

Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobacco plants

C. Marchive , R. Mzid , L. Deluc , F. Barrieu , Julien Pirrello et al.
Journal of Experimental Botany, 2007, 58 (8), pp.1999-2010. ⟨10.1093/jxb/erm062⟩
Article dans une revue hal-02461151 v1
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Sl-ERF2, a Tomato Ethylene Response Factor Involved in Ethylene Response and Seed Germination

Julien Pirrello , Fabiola Jaimes Miranda , Maria Teresa Sanchez-Ballesta , Barthélémy Tournier , Qaiser Khalil Ahmad et al.
Plant and Cell Physiology, 2006, 4 (9), pp.1195-1205. ⟨10.1093/pcp/pcj084⟩
Article dans une revue hal-03597595 v1

Endoreduplication gene regulatory networks in tomato fruits

Edouard Tourdot , Norbert Bollier , Julien Pirrello , Frederic Gevaudant , Nathalie Frangne et al.
International plant molecular biology 2018, Aug 2018, Montpellier, France. 2018
Poster de conférence hal-02734138 v1

Endoreduplication gene regulatory networks in tomato fruits

Edouard Tourdot , Norbert Bollier , Julien Pirrello , Frederic Gevaudant , Nathalie Frangne et al.
1. international Plant Systems Biology meeting, Sep 2018, Roscoff, France. 2018
Poster de conférence hal-02734428 v1