Alain Charcosset
Publications
Publications
Charaterization of maize landraces to identify source of diversity26. EUCARPIA Maize and Sorghum Conference, Silvio Salvi; Francesco Camerlengo; Elisabetta Frascaroli; Marco Maccaferri; Cristian Forestan; Roberto Tuberosa, Jun 2025, Bologna, Italy |
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A Composite Hypothesis Testing Approach to Detect Pleiotropic Genomic RegionsEucarpia Biometrics in Plant Breeding 2025, Sep 2025, Edimbourg (GB), United Kingdom |
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Predicting seed composition and agronomic traits in maize genetic resources using phenomic selection based on near-infrared spectraJoint PRO-GRACE/EMPHASIS policy symposium and workshop about plant genetic resources and phenotyping, Euroseeds, Jun 2024, Brussels, Belgium |
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Exploring European maize genetic resources for adaptation using high-throughout genotyping, genomic prediction and landscape genomics22. EUCARPIA General Congress, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Aug 2024, Leizpig, Germany |
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Complementing genomics with platform omics help decipher the genetic architecture of in-field productivity in the presence of genotype by Environment interactions.3rd GxExM Symposium, Oct 2024, Wageningen, Netherlands |
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Genome-wide association studies on DNA pools identifies promising maize landraces and genomic regions to develop next generation varietiesPlant Biology Europe meeting PEB 2023, Jul 2023, Marseille, France |
Genomic selection and Genome-wide association studies on DNA pools identifies promising maize landraces and genomic regions to develop next generation varieties2. Colloque INRAE Genomics, INRAE Genomics, Nov 2023, Bordeaux, France |
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Proteomics-based systems approach of maize response to water deficit5. INPPO International Plant Proteomics Organization, May 2023, Thessaloniki, Greece |
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Improving genomic predictions with inbreeding and non-additive effects in two admixed maize hybrid populations in single and multi-environment contextsXXVth EUCARPIA Maize and Sorghum Conference, May 2022, Belgrade, Serbia |
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Développement d'une puce de génotypage haut débit des Insertions/Délétions chez le maïs : Application aux études d'associations pangénomiquesRencontre Science et Parteneriat Plant2Pro, Plant2Pro, Jun 2022, Paris, France |
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Caractériser la diversité génétique et application à l’étude de caractères1. Carrefour de la sélection du Maïs, Pro Maïs; INRAE, Nov 2022, Montpellier, France |
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Presence/Absence variation contributes to adaptation, agronomic traits variation and hybrid performances in maizeXXVth EUCARPIA Maize and Sorghum Conference – Current challenges and new methods for Maize and Sorghum Breeding, May 2022, Belgrade, Serbia |
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Integrated acclimation responses of maize root hydraulic architecture to water deficitEMBO Workshop - Molecular responses of plants facing climate change, Jun 2022, Montpellier, France |
Studying G×E to dissect plant responses to environmental changes: integration of methods and data18. Eucarpia Biometrics in Plant Breeding Conference, Hans-Peter Piepho; Laurence Moreau; Tristan Mary-Huard, Sep 2022, Gif-sur-Yvette, France |
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Advances in maize genetic resources characterisation and useFrontiers of Science and Technology in Crop Breeding and Production, MRIZP, Jun 2021, Belgrade, Serbia |
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A systems approach of drought tolerance in maizeAMAIZING Final Conference, Sep 2021, Online, France |
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A systems approach of drought response in maizeJournée SPS-CLAND, Sep 2021, Online, France |
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A systems approach of drought response in maizeSéminaire du département des Science de l'Environnement de l'Université de Bordeaux, Nov 2021, Bordeaux, France |
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Des modèles pour répondre à quels besoins de R&D ? Les besoins du généticienAnimation scientifique GIS-BV : Modèle de culture et autres modèles prédictifs pour la R&D en biologie végétale, Jun 2020, Paris, France |
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Levier génétique et stress abiotiques : principaux acquis et perspectives des projets nationaux BreedWheat (blé) et Amaizing (maïs)Phloème 2020 : biennales de l’innovation céréalière, Arvalis - Institut du Végétal, Jan 2020, Paris, France |
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Systems genetics of drought-related traits in maizeEvolutionary Systems Biology congress, Feb 2020, Cambridge, United Kingdom |
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Integrating proteomics and genomics into systems genetics to better understand the mechanisms of drought tolerance in maizeJournée SFEAP-SFSM, Apr 2019, Paris, France |
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Genotyping-by-sequencing and SNP arrays are complementary for detecting quantitative trait loci by tagging different haplotypes in association studies24. Eucarpia Maize and Sorghum Conference, Oct 2019, Freising, Germany |
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Genome-wide SNP genotyping of DNA pools identifies original landraces to enrich maize breeding genepoolsHarlan International Symposium : Harlan III, Jun 2019, Montpellier, France |
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Genomic prediction in early stages of a maize breeding program: comparison of testcross and factorial designXXIVth Eucarpia Maize and Sorghum conference, TUM, Oct 2019, Freising, Germany |
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Dissecting G×E and QTL×E of maize yield in contrasting scenarios of light, heat and water deficit24. Eucarpia Maize and Sorghum Conference, TUM School of Life Sciences Weihenstephan, Oct 2019, Freising, Germany |
Systems genetics of drought tolerance in maizeSymposium GisBV, Oct 2019, Paris, France |
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Contribution des Insertion/Délétions à la variations des caractères, l’adaptation et aux performances hybrides au moyen d’une puce de génotypage haut débitColloque GIS-BV, Jul 2019, Paris, France |
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Genotyping-by-sequencing and SNP-arrays are complementary for detecting quantitative trait loci by tagging different haplotypes in association studiesEuropean maize meeting, May 2019, Montpellier, France |
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Regulation of aquaporin expression in maize: proximal and distal eQTLs60. Maize Genetics Conference, Mar 2018, Saint-Malo, France |
Revisiting hybrid breeding designs using genomic predictions calibrated on factorials between segregating families: a simulation studyXVII Eucarpia biometrics in plant breeding, Sep 2018, Ghent, Belgium |
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Twenty years of divergent selection for flowering time from maize inbred lines60th Annual Maize Genetics Conference, MaizeGDB.org, Mar 2018, Saint Malo (FR), France |
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Deciphering the interest of integrating PAV genomic information in genetic analysis by investigating the extent of linkage disequilibriumWorkshop Series DynaGeV (Dynamique des Génomes Végétaux), Jun 2018, Rennes, France |
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Genome-wide SNP genotyping of DNA pools identifies original landraces to enrich maize breeding genepools4. International Symposium on Genomics of Plant Genetic Resources (GPGR4), Sep 2017, Giessen, Germany |
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Heterosis in maize : intermated recombinant inbred lines and their immortalized F2 reveal QTLs with dominant effects but no overdominance59. Maize Genetics Conference, Mar 2017, Saint-Louis, United States |
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GWAS for protein expression under normal and water deficit conditions in maize leavesJournées du Protéome Vert, Mar 2017, Paris, France |
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DNA pooling for evaluating originality of the landraces1. German-French Maize Breeders School, May 2017, Hohenheim, Germany |
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Genome-wide association study between 60 000 Present/Absent Variants and 29 agronomic traits using a new high throughput genotyping arrayWorkshop Series DynaGeV (Dynamique des Génomes Végétaux), Jul 2016, Paris, France |
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Optimization of the calibration set in genomic selectionIUFRO international Conference Genomics and forest tree Genetics, May 2016, Arcachon, France |
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Association mapping for transition to autotrophic growth under chilling conditions in maizeEucarpia 2016. Plant Breeding: the Art of Bringing Science to Life, Aug 2016, Zürich, Switzerland |
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A new algorithm for GWAS panel optimization, applications in plant geneticsXXVIII. International Biometric Conference (IBC 2016), Dec 2017, Victoria, Canada |
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A new and high-throughput DNA pooling method based on 50K illumina maize array to unravel genetic diversity within maize landraces germplasm and identify original genetic ressources for prebreeding23. Eucarpia Maize and Sorghum conference on Genomics and Phenomics for Model-Based Maize and Sorghum Breeding, Agence Nationale de la Recherche (ANR). FRA., Jun 2015, Montpellier, France |
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Genetic variability of the sensitivity of grain number to drought and high temperature in maizeRecent progress in drought tolerance from genetics to modelling, Jun 2015, Montpellier, France |
Effect of structuration and relatedness on power in Genome Wide Association Studies23. Eucarpia Maize and Sorghum conference on Genomics and Phenomics for Model-Based Maize and Sorghum Breeding, Jun 2015, Montpellier, France |
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Relatedness distribution estimation between individuals in multi-population panels43rd European Mathematical Genetics Meeting (EMGM), Apr 2015, Brest, France. pp.1 |
Ongoing activities within the project DIVERZEATY - Genetic diversity of Serbian maize local landraces and inbred lines23. Eucarpia Maize and Sorghum conference on Genomics and Phenomics for Model-Based Maize and Sorghum Breeding, Agence Nationale de la Recherche (ANR). FRA., Jun 2015, Montpellier, France |
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BioMercator 4 : A complete framework to integrate QTL, meta-QTL, and genome annotation.European Conference on Computational Biology 2014, Sep 2014, Strasbourg, France |
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A generic tool for managing and exploiting genetic association studies results using high throughput genotyping and phenotypingPlant Genomics Seminar 2012, Apr 2012, Pont-Royal en Provence, France |
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Genetic architecture of European maize: multiparental QTL mapping and insights into heterosisMeeting of working Group Medicago sativa, Jan 2012, San Diego, United States |
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Genetic architecture of European maize: multiparental QTL mapping and insights into heterosis54. Maize Genetics Conference, Mar 2012, Portland, United States |
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Overview of QTL detection in plants and tests for synergistic epistatic interactions3. International Conference of Quantitative Genetics, Aug 2007, Hangzhou, China |
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Etude de la diversité génétique du maïs en Europe : analyse d'ADN ancien à partir d'échantillons d'herbier et confrontation avec l'analyse moléculaire à grande échelle de collections de populationsUn dialogue pour la diversité génétique, 2004, Lyon, France. pp.345-356 |
Heterosis in maize investigated using connected RIL populations11. Meeting of the Eucarpia section biometrics in plant breeding, Aug 2000, Paris, France |
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Au delà des QTLs : deux approches d'utilisation des marqueurs en sélectionSéminaire du groupe de travail "Génomes végétaux", Apr 1997, Méribel-les-Allues, France |
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Best linear unbiased estimator of the molecular genetic distance between inbred lines10. Meeting of the EUCARPIA Section Biometrics in Plant Breeding, May 1997, Poznan, Poland |
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Comparison of sever al approaches for predicting maize hybrid performance using marker data10. Meeting of the EUCARPIA Section Biometrics in Plant Breeding, May 1997, Poznan, Poland |
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Bases génétiques et physiologiques de l'efficacité d'utilisation de la fumure azotée chez le maïsColloque AGPM, 1996, France |
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Construction de génotypes assistée par marqueurs chez le maïs. PosterSéminaire, Oct 1996, Toulouse, France |
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Utilisation des techniques de marquage génétique pour l'analyse de la variabilité génétique et la prédiction du phénomène d'hétérosisJournée ASF (Association des sélectionneurs français), Feb 1992, France |
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Structuration of genetic variability revealed by RFLPs among a set of inbred lines of maize (Zea mays L.) including the most important heterotic groups for modern hybrid maize seed industryGenetic resources section meeting of Eucarpia, Mar 1994, Clermont-Ferrand, France |
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Efficiency of marker-assisted selection9. Meeting of the EUCARPIA section biometrics in plant breeding, Jul 1994, Wageningen, Netherlands |
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Investigation into the effect of genetic background on QTL expression using three connected maize recombinant inbred lines (RIL) populations9. Meeting of the EUCARPIA section biometrics in plant breeding, Jul 1994, Wageningen, Netherlands |
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Methodes mathematiques pour l'etude des genes controlant des caracteres quantitatifsColloque BRG/INRA. Ressources génétiques animales et végétales. Méthodologies d'étude et de gestion, Sep 1993, Montpellier, France |
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Marquage et expression du genome chez le maisColloque BRG/INRA. Ressources génétiques animales et végétales. Méthodologie d'étude et de gestion, Sep 1993, Montpellier, France |
Relationship between molecular and morphological distances in a maize inbred lines collection. Application for breeders'rights protection9. Meeting of the EUCARPIA, Jul 1994, Wageningen, Netherlands |
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Relationship between molecular and morphological distances in a maize inbred lines collection. Application for breeders'rights protection9. Meeting of the EUCARPIA section biometrics in plant breeding, Jul 1994, Wageningen, Netherlands |
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Influence du fond génétique sur l'expression de QTLs de précocité chez le maïsRéunion du groupe de travail marqueurs moléculaires chez les végétaux, Mar 1993, Meribel, France |
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Un exemple de gestion des ressources genetiques en vue de la selectionColloque international en hommage a Jean Pernes, Jan 1992, Paris, France |
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Prediction of heterosis13. EUCARPIA Congress, Jul 1992, Angers, France |
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Marquage moleculaire et amelioration des plantesSeminaire international INRA-ICARDA, Nov 1991, Montpellier, France |
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SyntheseMeribel 91. Seminaire du Departement de Genetique et d'Amelioration des Plantes, Mar 1991, Meribel, France |
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Place des marqueurs dans une strategie de prediction de la valeur d'hybrides F1Meribel 91. Seminaire du Departement de Genetique et d'Amelioration des Plantes, Mar 1991, Meribel, France |
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Performance prediction of maize single cross hybrids15. Conference, Jun 1990, Budapest, Hungary |
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Prediction de l'heterosis a partir de plans de croisements top-cros : interet de la distance de Hanson et CasasMeribel 88, Mar 1988, Meribel, France |
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Journées Scientifiques du Département Sciences de la Vie et Santé - AgroParisTechJournées Scientifiques du Département Sciences de la Vie et Santé - AgroParisTech, Apr 2024, Palaiseau, France. 2025 |
Economic efficiency of one cycle of marker-assisted selection23 p., 1998 |
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Building a calibration set for genomic prediction, characteristics to be considered, and optimization approachesAhmadi Nourollah (ed.); Bartholomé Jérôme (ed.). Genomic prediction of complex traits: methods and protocols, 2467 (2467), Humana Press; Springer, pp.77-112, 2022, Methods in Molecular Biology, 978-1-0716-2204-9. ⟨10.1007/978-1-0716-2205-6_3⟩ |
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Les mélanges de variétés ont contribué à l’expansion géographique mondiale d’une espèce cultivée, le maïs101 secrets de l’ADN, 2019 |
OptiMAS: a decision support tool to conduct marker-assisted selection programsCrop Breeding, 1145, Humana Press Inc., 20 p., 2014, Methods in Molecular Biology, 978-1-4939-0446-4 978-1-4939-0445-7. ⟨10.1007/978-1-4939-0446-4_9⟩ |
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L'histoire européenne du maïs revisitée à la lumière de la génétique : la contribution de la côte est de l'Amérique du NordTREMBLAY Roland (éd.). Les Iroquoiens du Saint-Laurent, peuple du maïs volume en anglais : The Saint Lawrence Iroquoians, Corn People, Musée d'Archéologie et d'Histoire de Montréal/Les Editions de l'Homme, p. 50-51 et 137, 2007 |
Le maïs et le blé, céréales modèles pour la recherche en biologie intégrative et son application à la sélectionLa génomique en biologie végétale, INRA Editions, 2004, Science Update, 2-7380-1167-5 |
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Evolution moléculaire et validation de gènes candidatsLa génomique en biologie végétale, INRA Editions, 2004, Science Update, 2-7380-1167-5 |
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Progress and prospects for marker-assisted selectionQuantitative genetics and breeding methods: the way ahead, 96, INRA Editions, 2001, Colloques de l'INRA, 2-7380-0952-2 |
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A French cooperative programme for management and utilization of maize genetic resources.Broadening the Genetic Base of Crop Production, International Plant Genetic Resources Institute (IPGRI) Food and Agriculture Organization of the United Nations (FAO) CABI, pp.331-340, 2000, ⟨10.1079/9780851994116.0331⟩ |
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Intérêts des marqueurs en sélectionLes marqueurs moléculaires en génétique et biotechnologies végétales, INRA Editions, 1999 |
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BioMercator2012 |
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Collaborations de recherche entre génétique végétale et agronomie : une approche diachronique pour appréhender leurs enjeux actuels et leur renouvellementInrae. 2025 |
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Place des agricultures européennes dans le monde à l’horizon 2050 : Entre enjeux climatiques et défis de la sécurité alimentaire mondiale[0] INRAE. 2020, 144 p |
Etude de l'heterosis chez le mais Zea Mays L.: prediction de la valeur d'hybrides F1 sur la base d'informations agronomiques, biochimiques et moleculairesSciences du Vivant [q-bio]. 1990. Français. ⟨NNT : ⟩ |