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Alain Vignal

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Honeybee genomics

Publications

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AmelHap: Leveraging drone whole-genome sequence data to create a honey bee HapMap

M. Parejo , A. Talenti , M. Richardson , A. Vignal , M. Barnett
Scientific Data , 2023, 10 (1), pp.198. ⟨10.1038/s41597-023-02097-z⟩
Journal articles hal-04066318v1
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Identification of runs of homozygosity in Western honey bees ( Apis mellifera ) using whole‐genome sequencing data

Annik Imogen Gmel , Matthieu Guichard , Benjamin Dainat , Geoffrey Rhys Williams , Sonia Eynard
Ecology and Evolution, 2023, 13 (1), pp.e9723. ⟨10.1002/ece3.9723⟩
Journal articles hal-03993788v1
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Genetic diversity and population genetic structure analysis of Apis mellifera subspecies in Algeria and Europe based on complementary sex determiner (CSD) gene

Riad Fridi , Nacera Tabet Aoul , Guillau Catays , Benjamin B. Basso , Kaspar Bienefeld
Apidologie, 2022, 53 (1), pp.4. ⟨10.1007/s13592-022-00920-x⟩
Journal articles hal-03626711v1
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Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: Statistical Methods and their application to honeybee

Sonia E Eynard , Alain Vignal , Benjamin Basso , Kamila Canale‐tabet , Yves Le Conte
Molecular Ecology Resources, 2022, 22 (8), pp.3035-3048. ⟨10.1111/1755-0998.13685⟩
Journal articles hal-03855231v1
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Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones

David Wragg , Sonia Eynard , Benjamin B. Basso , Kamila Canale-Tabet , Emmanuelle Labarthe
Molecular Ecology Resources, 2022, 22 (8), pp.3068-3086. ⟨10.1111/1755-0998.13665⟩
Journal articles hal-03807491v1

Two quantitative trait loci are associated with recapping of Varroa destructor ‐infested brood cells in Apis mellifera mellifera

M. Guichard , B. Dainat , S. Eynard , Alain Vignal , Bertrand Servin
Animal Genetics, 2022, 53 (1), pp.156-160. ⟨10.1111/age.13150⟩
Journal articles hal-03540810v1
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Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences

Matthieu Guichard , Benjamin Dainat , Sonia Eynard , Alain Vignal , Bertrand Servin
Animal Genetics, 2021, pp.13070. ⟨10.1111/age.13070⟩
Journal articles hal-03252574v1
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MOSAR -Méthodes et Outils pour la Sélection d'Abeilles Résistantes à Varroa

Benjamin B. Basso , Sonia E. Eynard , Alain Vignal , Maxime Beguin , Anne-Laure Guirao
Innovations Agronomiques, 2021, 82, pp.229-245. ⟨10.15454/zna6-4g12⟩
Journal articles hal-03159732v1
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Unraveling the history of the genus Gallus through whole genome sequencing

Mahendra Mariadassou , Marie Suez , Sanbadam Sathyakumar , Alain Vignal , Mariangela Arca
Molecular Phylogenetics and Evolution, 2021, 158, pp.107044. ⟨10.1016/j.ympev.2020.107044⟩
Journal articles hal-03155990v1
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Dense sampling of bird diversity increases power of comparative genomics

Shaohong Feng , Josefin Stiller , Yuan Deng , Joel Armstrong , Qi Fang
Nature, 2020, 587 (7833), pp.252-257. ⟨10.1038/s41586-020-2873-9⟩
Journal articles hal-03155898v1
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Descriptive analysis of the varroa non-reproduction trait in honey bee colonies and association with other traits related to varroa resistance

Sonia E. Eynard , Christina Sann , Benjamin Basso , Anne-Laure Guirao , Yves Le Conte
Insects, 2020, 11 (8), pp.1-16. ⟨10.3390/insects11080492⟩
Journal articles hal-02937567v1
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The quail genome: insights into social behaviour, seasonal biology and infectious disease response

Katrina M. Morris , Matthew M. Hindle , Simon Boitard , David W. Burt , Angela F. Danner
BMC Biology, 2020, 18 (1), Non paginé. ⟨10.1186/s12915-020-0743-4⟩
Journal articles hal-02625167v1
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CIReine - Conception d’Indicateurs de qualité des Reines d’abeilles

Benjamin Basso , Pierrick Aupinel , M. Béguin , J.F Bompa , A. Decourtye
Innovations Agronomiques, 2020, 79, pp.31-48. ⟨10.15454/7wg7-km04⟩
Journal articles hal-02972747v1
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Structure of the intergenic spacers in chicken ribosomal DNA

Alexander Dyomin , Svetlana Galkina , Valerie Fillon , Stephane Cauet , Celine Lopez-Roques
Genetics Selection Evolution, 2019, 51 (1), pp.59. ⟨10.1186/s12711-019-0501-7⟩
Journal articles hal-02334969v1
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Two new structural mutations in the 5′ region of the ASIP gene cause diluted feather color phenotypes in Japanese quail

Annie Robic , Mireille Morisson , Sophie Leroux , David Gourichon , Alain Vignal
Genetics Selection Evolution, 2019, 51 (1), pp.12. ⟨10.1186/s12711-019-0458-6⟩
Journal articles hal-02105885v1
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A guinea fowl genome assembly provides new evidence on evolution following domestication and selection in galliformes

Alain Vignal , Simon Boitard , Noémie Thébault , Guiguigbaza‐kossigan Dayo , Valentine Yapi‐gnaore
Molecular Ecology Resources, 2019, 19 (4), pp.997-1014. ⟨10.1111/1755-0998.13017⟩
Journal articles hal-02617903v1
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Developing reduced SNP assays from whole-genome sequence data to estimate introgression in an organism with complex genetic patterns, the Iberian honeybee (Apis mellifera iberiensis)

Dora Henriques , Melanie Parejo , Alain Vignal , David Wragg , Andreas Wallberg
Evolutionary Applications, 2018, Open Access (8), pp.1-13. ⟨10.1111/eva.12623⟩
Journal articles hal-01818262v1
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A New chicken genome assembly provides insight into avian genome structure

Wesley C. Warren , Ladeana W. Hillier , Chad Tomlinson , Patrick Minx , Milinn Kremitzki
G3, 2017, 7 (1), pp.109-117. ⟨10.1534/g3.116.035923⟩
Journal articles hal-01604336v1

Genome-wide scans between two honeybee populations reveal putative signatures of human-mediated selection

M. Parejo , David Wragg , D. Henriques , Alain Vignal , M. Neuditschko
Animal Genetics, 2017, 48 (6), pp.704-707. ⟨10.1111/age.12599⟩
Journal articles hal-02621841v1
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Autosomal and mitochondrial adaptation following admixture: a case study on the honey bees of Reunion Island

David Wragg , Maéva Angélique Techer , Kamila Canale-Tabet , Benjamin Basso , Jean Pierre Bidanel
Genome Biology and Evolution, 2017, 10 (1), pp.220-238. ⟨10.1093/gbe/evx247⟩
Journal articles hal-01723933v1
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Deciphering mechanisms underlying the genetic variation of general production and liver quality traits in the overfed mule duck by pQTL analyses

Yoannah François , Alain Vignal , Caroline Molette , Nathalie Marty-Gasset , Stéphane Davail
Genetics Selection Evolution, 2017, 49 (1), pp.38. ⟨10.1186/s12711-017-0313-6⟩
Journal articles hal-01510790v1

Species difference in ANP32A underlies influenza A virus polymerase host restriction

Jason S. Long , Efstathios S. Giotis , Olivier Moncorgé , Rebecca Frise , Bhakti Mistry
Nature, 2016, 529 (7584), pp.101-104. ⟨10.1038/nature16474⟩
Journal articles hal-02641456v1
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Whole-genome resequencing of honeybee drones to detect genomic selection in a population managed for royal jelly

David Wragg , Maria Marti-Marimon , Benjamin Basso , Jean Pierre Bidanel , Emmanuelle Labarthe
Scientific Reports, 2016, 6, pp.1-13. ⟨10.1038/srep27168⟩
Journal articles hal-02641643v1

Using Whole-Genome Sequence Information to Foster Conservation Efforts for the European Dark Honey Bee, Apis mellifera mellifera

Melanie Parejo , David Wragg , Laurent Gauthier , Alain Vignal , Peter Neumann
Frontiers in Ecology and Evolution, 2016, Version OnLine, Non paginé. ⟨10.3389/fevo.2016.00140⟩
Journal articles hal-02641556v1
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GWAS analyses reveal QTL in egg layers that differ in response to diet differences

Hélène Romé , Amandine Varenne , Frédéric Herault , Hervé Chapuis , Christophe Alleno
Genetics Selection Evolution, 2015, 47 (1), n.p. ⟨10.1186/s12711-015-0160-2⟩
Journal articles hal-01230151v1
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Mapping and genotypic analysis of the NK-lysin gene in chicken

Mi Ok Lee , Ence Yang , Mireille Morisson , Alain Vignal , Yong-Zhen Huang
Genetics Selection Evolution, 2014, 46 (1), pp.43. ⟨10.1186/1297-9686-46-43⟩
Journal articles hal-01341256v1

Mule duck "foie gras" shows different metabolic States according to its quality phenotype by using a proteomic approach

Yoannah François , Christel C. Marie-Etancelin , Alain Vignal , Didier D. Viala , Stephane Davail
Journal of Agricultural and Food Chemistry, 2014, 62 (29), pp.7140-7150. ⟨10.1021/jf5006963⟩
Journal articles hal-02637456v1
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Génétique et apiculture

Jean Pierre Bidanel , Yves Le Conte , Alain Vignal , Benjamin Basso
Lettre de l'ITSAP, 2014, 8, pp.11-12
Journal articles hal-02630073v1
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Transcriptome-wide investigation of genomic imprinting in chicken

Laure Fresard , Sophie Leroux , Bertrand Servin , David Gourichon , Patrice Dehais
Nucleic Acids Research, 2014, 42 (6), pp.3768-3782. ⟨10.1093/nar/gkt1390⟩
Journal articles hal-01019569v1

La génétique et l'apiculture

Benjamin Basso , Jean Pierre Bidanel , Yves Le Conte , Alain Vignal
Info-Reines, 2014, 106, pp.36-37
Journal articles hal-01193933v1

The duck genome and transcriptome provide insight into an avian influenza virus reservoir species

Yinhua Huang , Yingrui Li , David W Burt , Hualan Chen , Yong Zhang
Nature Genetics, 2013, 45 (7), pp.776-783. ⟨10.1038/ng.2657⟩
Journal articles hal-02652041v1
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Génomique des canards

Alain Vignal , Christian Diot , Caroline Molette , Thomas Faraut , Man Rao
INRA Productions Animales, 2013, 26 (5), pp.391-402
Journal articles hal-01207754v1
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Evidence of Phenotypic and Genetic Relationships between Sociality, Emotional Reactivity and Production Traits in Japanese Quail

Julien Recoquillay , Christine Leterrier , Ludovic Calandreau , Aline Bertin , Frederique Pitel
PLoS ONE, 2013, 8, online (12), Non paginé. ⟨10.1371/journal.pone.0082157⟩
Journal articles hal-01129795v1
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A duck RH panel and its potential for assisting NGS genome assembly

Man Rao , Mireille Morisson , Thomas Faraut , Suzanne Bardes , Katia K. Feve
BMC Genomics, 2012, 13 (september), Non paginé. ⟨10.1186/1471-2164-13-513⟩
Journal articles hal-02646793v1
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A maximum likelihood QTL analysis reveals common genome regions controlling resistance to Salmonella colonization and carrier-state

Thanh-Son T.-S. Tran , Catherine C. Beaumont , Nigel Salmon , Mark Fife , Pete Kaiser
BMC Genomics, 2012, 13, online (may), Non paginé. ⟨10.1186/1471-2164-13-198⟩
Journal articles hal-02648110v1
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Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail

Laure Fresard , Sophie Leroux , Patrice Dehais , Bertrand Servin , Hélène Gilbert
BMC Genomics, 2012, 13, online (october), Non paginé. ⟨10.1186/1471-2164-13-551⟩
Journal articles hal-01129669v1
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Etat actuel du séquençage et de la connaissance du génome des espèces animales

Alain Vignal
INRA Productions Animales, 2011, 24 (4), pp.287-404
Journal articles hal-02642585v1

New QTL for resistance to Salmonella carrier-state identified on fowl microchromosomes

Fanny Calenge , Alain Vignal , Julie Demars , Katia K. Feve , Pierrette Menanteau
Molecular Genetics and Genomics, 2011, 285 (3), pp.237-243. ⟨10.1007/s00438-011-0600-9⟩
Journal articles hal-02647962v1
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Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos)

Robert Hs Kraus , Hindrik Hd Kerstens , Pim Van Hooft , Richard Pma Crooijmans , Jan J. van Der Poel
BMC Genomics, 2011, 12, online (march), Non paginé. ⟨10.1186/1471-2164-12-150⟩
Journal articles hal-02651817v1
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Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model

Marine M. Douaud , Katia K. Feve , Fabienne F. Pituello , David Gourichon , Simon S. Boitard
PLoS ONE, 2011, 6, online (10), Non paginé. ⟨10.1371/journal.pone.0026932⟩
Journal articles hal-01000461v1
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Genetic control of resistance to salmonellosis and to Salmonella carrier-state in fowl: a review

Fanny Calenge , Peter Kaiser , Alain Vignal , Catherine C. Beaumont
Genetics Selection Evolution, 2010, 42, online (april), Non paginé. ⟨10.1186/1297-9686-42-11⟩
Journal articles hal-02663835v1
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Non PCR-amplified transcripts and AFLP® fragments as reduced representations of the quail genome for 454 Titanium sequencing

Sophie Leroux , Katia Feve , Florence Vignoles , Olivier Bouchez , Christophe C. Klopp
BMC Research Notes, 2010, 3, online (july), Non paginé. ⟨10.1186/1756-0500-3-214⟩
Journal articles hal-01129412v1
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Mapping main, epistatic and sex-specific QTL for body composition in a chicken populaton divergently selected for low or high growth rate

Georgina A Ankra-Badu , Daniel Shriner , Elisabeth Le Bihan-Duval , Sandrine Mignon-Grasteau , Frederique Pitel
BMC Genomics, 2010, 11, online (february), Non paginé. ⟨10.1186/1471-2164-11-107⟩
Journal articles hal-02668076v1
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Integrative mapping analysis of chicken microchromosome 16 organization

Romain Solinhac , Sophie Leroux , Svetlana Galkina , Olympe Chazara , Katia Feve
BMC Genomics, 2010, 11 (1), pp.616. ⟨10.1186/1471-2164-11-616⟩
Journal articles hal-02356278v1

Evidence for introgressive hybridization of wild common quail (Coturnix coturnix) by domesticated Japanese quail (Coturnix japonica) in France

Olympe Chazara , Francis Minvielle , Denis Roux , Bertrand Bed'Hom , Katia Feve
Conservation Genetics, 2010, 11 (3), pp.1051--1062. ⟨10.1007/s10592-009-9951-8⟩
Journal articles hal-01022547v1

Mapping QTL for growth and shank traits in chickens divergently selected for high or low body weight

G.A. Ankra-Badu , Elisabeth Le Bihan-Duval , Sandrine Mignon-Grasteau , Frederique Pitel , Catherine C. Beaumont
Animal Genetics, 2010, 41 (4), pp.400-405. ⟨10.1111/j.1365-2052.2009.02017.x⟩
Journal articles hal-02661082v1

La cellule : unité fondamentale de la vie.

Alain Vignal
Cheval Santé, 2009, 6, pp.24-25
Journal articles hal-02653463v1

Contribution of Radiation Hybrids to Genome Mapping in Domestic Animals.

Thomas Faraut , Simon de Givry , Christophe Hitte , Yvette Lahbib Mansais , Mireille Morisson
Cytogenetic and Genome Research, 2009, 126 (1-2), pp.21-33. ⟨10.1159/000245904⟩
Journal articles inserm-00442389v1
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QTL for several metabolic traits map to loci controlling growth and body composition in an F2 intercross between high- and low-growth chicken lines

Javad Nadaf , Frederique Pitel , Hélène Gilbert , Michel Jacques M.J. Duclos , Florence Vignoles
Physiological Genomics, 2009, 38 (3), pp.241-249. ⟨10.1152/physiolgenomics.90384.2008⟩
Journal articles hal-01193471v1

QTL for resistance to Salmonella carrier state confirmed in both experimental and commercial chicken lines.

Fanny Calenge , Frédéric Lecerf , Julie Demars , K. Feve , F. Vignoles
Animal Genetics, 2009, 40 (5), pp.590-7. ⟨10.1111/j.1365-2052.2009.01884.x⟩
Journal articles hal-00730059v1
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Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution

Darren K. Griffin , Lindsay B. Robertson , Helen G. Tempest , Alain Vignal , Valerie Fillon
BMC Genomics, 2008, 9, pp.168. ⟨10.1186/1471-2164-9-168⟩
Journal articles hal-02663544v1
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Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping.

Marine M. Douaud , Katia K. Feve , Marie Gérus , Valerie Fillon , Suzanne Bardes
BMC Genomics, 2008, 9, pp.1-12. ⟨10.1186/1471-2164-9-129⟩
Journal articles hal-02662832v1
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Réduction du portage des salmonelles chez les animaux de rente : une approche multidisciplinaire

Philippe Velge , Isabelle Virlogeux-Payant , Anne-Christine Lalmanach , Catherine C. Belloc , P. Fravalo
Productions Animales, 2008, 21 (1), pp.117-126
Journal articles hal-02655195v1

An integrated approach of genetic resistance to Salmonella carrier state in fowls: from genetics to genomics and modelling.

C. Beaumont , Frédéric Lecerf , J. Protais , Fanny Calenge , K. Prevost
Developments in Biologicals, 2008, 132, pp.353-7. ⟨10.1051/lait:1999223⟩
Journal articles hal-00729836v1
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Cloning of ovocalyxin-36, a novel chicken eggshell protein related to lipopolysaccharide-binding proteins, bactericidal permeability-increasing proteins, and plunc family proteins

Joël Gautron , E. Murayama , Alain Vignal , Mireille Morisson , M.D. Mckee
Journal of Biological Chemistry, 2007, 282 (8), pp.5273-5286
Journal articles hal-02658020v1

The chicken RH map: current state of progress and microchromosome mapping.

Mireille Morisson , - Denis M , Denis Milan , C. Klopp , Sophie S. Leroux
Cytogenetic and Genome Research, 2007, 117, pp.14-21
Journal articles hal-02654558v1

FISH mapping of 57 BAC clones reveals strong conservation of synteny between Galliformes and Anseriformes

Valerie Fillon , Florence F. Vignoles , R.P.M.A. Crooijmans , M.A.M. Groenen , R. Zoorob
Animal Genetics, 2007, 38, pp.303-307
Journal articles hal-02654510v1

Female-Specific DNA Sequences in the Chicken Genome.

Z. Granevitze , S. Blum , Hans Hueimin Cheng , Alain Vignal , Mireille Morisson
Journal of Heredity, 2007, 98, pp.238-242
Journal articles hal-02660748v1
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Identification of QTL controlling meat quality traits in an F2 cross between two chicken lines selected for either low or high growth rate

Javad Nadaf , Hélène Gilbert , Frederique Pitel , Cécile Berri , Katia K. Feve
BMC Genomics, 2007, 8 (155), 8 p
Journal articles hal-02662011v1
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La séquence du génome de la poule et ses applications en sélection

Alain Vignal , B. Besbes
Productions Animales, 2006, 19 (2), pp.109-118
Journal articles hal-02664615v1
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Mapping quantitative trait loci affecting fatness and breast muscle weight in meat-type chicken lines divergently selected on abdominal fatness

Sandrine Lagarrigue , Frederique Pitel , Wilfrid Carré , Behnam Abasht , Pascale P. Le Roy
Genetics Selection Evolution, 2006, 38, pp.85-97
Journal articles hal-02658083v1

FISH on avian lampbrush chromosomes produces higher resolution gene mapping.

Svetlana Galkina , S. Deryusheva , Valerie Fillon , Alain Vignal , R. Crooijmans
Genetica, 2006, 128, pp.241-251
Journal articles hal-02654455v1
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Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 millions years of divergence

Boniface Kayang , Valerie Fillon , Miho Inoue-Murayama , Mitsuru Miwa , Sophie S. Leroux
BMC Genomics, 2006, 7 (101), 18 p
Journal articles hal-02660914v1
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Search for QTL affecting the shape of the egg laying curve of the Japanese quail

Francis F. Minvielle , Boniface B. Kayang , Miho Inoue-Murayama , Mitsuru Miwa , Alain Vignal
BMC Genetics, 2006, 7, pp.26
Journal articles hal-02655901v1
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Fatness QTL on chicken chromosome 5 and interaction with sex

Behnam Abasht , Frederique Pitel , Sandrine Lagarrigue , Elisabeth Le Bihan-Duval , Pascale P. Le Roy
Genetics Selection Evolution, 2006, 38, pp.297-311
Journal articles hal-02661352v1
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Microsatellite mapping of QTL affecting growth, feed consumption, egg production, tonic immobility and body temperature of Japanese quail

Francis F. Minvielle , Boniface B. Kayang , Miho Inoue-Murayama , Mitsuru Miwa , Alain Vignal
BMC Genomics, 2005, 6, pp.87
Journal articles hal-02672942v1

Second report on chicken genes and chromosomes 2005.

M. Schmid , I. Nanda , H. Hoehn , Manfred Schartl , T. Haaf
Cytogenetic and Genome Research, 2005, 109, pp.415-479
Journal articles hal-02677877v1
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A gene-based radiation hybrid map of chicken microchromosome 14 : comparison to human and alignment to the assembled chicken sequence

Mireille Morisson , Sophie S. Leroux , Carine Jiguet-Jiglaire , Sirine Assaf , Frederique Pitel
Genetics Selection Evolution, 2005, 37, pp.229-251. ⟨10.1051/gse:2004046⟩
Journal articles hal-02670446v1
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Construction of a radiation hybrid map of chicken chromosome 2 and alignment to the chicken draft sequence

Sophie S. Leroux , Mélanie Dottax , Suzanne Bardes , Florence F. Vignoles , Katia K. Feve
BMC Genomics, 2005, 6, pp.12. ⟨10.1186/1471-2164-6-12⟩
Journal articles hal-02682366v1

Assignment of non-informative turkey genetic markers through comparative approaches.

Km. Reed , Jacob Bak Holm , Mireille Morisson , Sophie S. Leroux , Alain Vignal
Cytogenetic and Genome Research, 2005, 109, pp.527-532
Journal articles hal-02675811v1
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A genome scan for quantitative trait loci affecting the Salmonella carrier-state in the chicken

Pierre Tilquin , Paul A. Barrow , José Marly , Frederique Pitel , Florence Plisson-Petit
Genetics Selection Evolution, 2005, 37 (5), pp.539-561
Journal articles hal-02677470v1

A genome scan with AFLPtm markers to detect fearfulness-related QTLs in Japanese quail

Catherine C. Beaumont , Odile Roussot , Katia K. Feve , Florence F. Vignoles , Sophie S. Leroux
Animal Genetics, 2005, 36, pp.401-407. ⟨10.111/j.1365-2052.2005.01336.x⟩
Journal articles hal-02677273v1

Molecular cytogenetic definition of the chicken geneome: the first complete avian karyotype.

J.S. Masabanda , D.W. Burt , P.C.M. O'Brien , Alain Vignal , Valerie Fillon
Cytogenetic and Genome Research, 2004, 106, pp.12
Journal articles hal-02670633v1
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A first-generation microsatellite linkage map of the Japanese quail

B.B. Kayang , Alain Vignal , M. Inoue-Murayama , M. Miwa , Jean Louis Monvoisin
Animal Genetics, 2004, 35, pp.195-200
Journal articles hal-02674147v1

Genetic linkage and expression analysis of SREBP and lipogenic genes in fat and lean chickens

S. Assaf , Sandrine Lagarrigue , Stéphanie Daval , M. Sansom , B. Leclercq
Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology, 2004, 137, pp.433-441
Journal articles hal-02670700v1

Genomics and the genetic improvement of broiler chicken.

Alain Vignal
Outlook On Agriculture, 2004, 33, pp.79-84
Journal articles hal-02670383v1

Chicken RH maps as a new tool for vertebrate comparative mapping at high resolution.

Mireille Morisson , Sophie S. Leroux , Frederique Pitel , Suzanne Bardes , Katia K. Feve
Cytogenetic and Genome Research, 2004, 106, pp.11
Journal articles hal-02671513v1

A radiation hybrid map of chicken chromosome 15

D.G.J. Jennen , R.P.M.A. Crooijmans , Mireille Morisson , A.E. Grootemaat , J.J. van Der Poel
Animal Genetics, 2004, 35, pp.63-65
Journal articles hal-02672815v1

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.

L.W. Hillier , W. Miller , E. Birney , Wesley Warren , R.C. Hardison
Nature, 2004, 432, pp.695-716
Journal articles hal-02675974v1

Sex ratios in mule duck embryos at various stages of incubation

Florene Batellier , F. Marchal , M.F. Scheller , Joël Gautron , Nadine Sellier
Theriogenology, 2004, 61 (2-3), pp.573-580. ⟨10.1016/s0093-691x(03)00208-5⟩
Journal articles hal-02548742v1
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Assignment of CPS1, OTC, CRYD, ARG2 and ASS genes to the chicken RH map.

T. Shimogiri , N. Bosak , Mireille Morisson , S. Okamoto , K. Kawabe
Genetics Selection Evolution, 2004, 36 (5), pp.593-599. ⟨10.1051/gse:2004019⟩
Journal articles hal-02676484v1
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A high-resolution radiation hybrid map of chicken chromosome 5 and comparison with human chromosomes

Frederique Pitel , Behnam Abasht , Mireille Morisson , Richard Pma Crooijmans , Florence F. Vignoles
BMC Genomics, 2004, 5, pp.142E-U6. ⟨10.1186/1471-2164-5-66⟩
Journal articles hal-02678290v1

A radiation hybrid map of chicken Chromosome 4.

T.S.K.M. Rabie , R.P.M.A. Crooijmans , Mireille Morisson , J. Andryszkiewicz , J.J. van Der Poel
Mammalian Genome, 2004, 15, pp.560-569
Journal articles hal-02675905v1

Molecular cytogenetic definition of the chicken genome: The first complete avian karyotype.

J.S. Masabanda , D.W. Burt , P.C.M. O'Brien , Alain Vignal , Valerie Fillon
Genetics, 2004, 166, pp.1367-1373
Journal articles hal-02675031v1

Development of a gene-based radiation hybrid map of chicken Chromosome 7 and comparison to human and mouse.

Mireille Morisson , C. Jiguet-Jiglaire , Sophie S. Leroux , Thomas Faraut , Suzanne Bardes
Mammalian Genome, 2004, 15, pp.732-739
Journal articles hal-02673764v1

Cloning of cDNA encoding the nuclear form of chicken sterol response element binding protein-2 (SREBP-2), chromosomal localization, and tissue expression of chicken SREBP-1 and -2 genes

S. Assaf , Dominique Hazard , Frederique Pitel , Mireille Morisson , M. Alizadeh
Poultry Science, 2003, 82, pp.54-61
Journal articles hal-02670802v1

A radiation hybrid panel and its use in developing a gene map of the chicken

Mireille Morisson , C. Jiguet-Jiglaire , Alexis Lemiere , Sophie S. Leroux , Thomas Faraut
British Poultry Science, 2003, 44, pp.797-798
Journal articles hal-02674651v1

The chicken cytogenetic map: an aid to microchromosome identification and avian comparative cytogenetics.

Valerie Fillon , Mireille Vignoles , A. Garrigues , Frederique Pitel , Mireille Morisson
British Poultry Science, 2003, 44, pp.795-797
Journal articles hal-02674192v1

Integration of chicken genomic resources to enable whole-genome sequencing.

J. Aerts , R.P.M.A. Crooijmans , S. Cornelissen , K. Hemmatian , T. Veenendaal
Cytogenetic and Genome Research, 2003, 102, pp.297-303
Journal articles hal-02672590v1
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AFLP linkage map of the japanese quail Coturnix japonica

Odile Roussot , Katia K. Feve , Florence Plisson-Petit , Frederique Pitel , J.M. Faure
Genetics Selection Evolution, 2003, 35, pp.559-572. ⟨10.1051/gse:2003039⟩
Journal articles hal-02670527v1

Effect of two candidate genes on the Salmonella carrier state in fowl

Catherine C. Beaumont , J. Protais , Frederique Pitel , Gaëtan Lévêque , D. Malo
Poultry Science, 2003, 82, pp.721-726
Journal articles hal-02670513v1
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Biodiversity of 52 chicken populations assessed by microsatellite typing of DNA pools.

J. Hillel , M.A.M. Groenen , Michèle Tixier-Boichard , A.B. Korol , L. David
Genetics Selection Evolution, 2003, 35, pp.533-557. ⟨10.1051/gse:2003038⟩
Journal articles hal-02677238v1

Isolation and characterisation of microsatellite genetic markers from Peking and Muscovy ducks

Carine Genet , Alain Vignal , Catherine Larzul
British Poultry Science, 2003, 44 (5), pp.794-795
Journal articles hal-02677418v1

Genetic diversity of chickens.

J. Hillel , M.A.M. Groenen , Michèle Tixier-Boichard , A. Korol , L. David
Archiv für Geflügelkunde. Sonderheft, 2002, Special Issue, pp.35
Journal articles hal-02674528v1

A chicken radiation hybrid panel and its use for mapping

Mireille Morisson , Thomas Faraut , Martine M. Yerle , Alain Vignal
Archiv für Geflügelkunde. Sonderheft, 2002, Special Issue, pp.35
Journal articles hal-02675399v1
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A review on SNP and other types of molecular markers and their use in animal genetics

Alain Vignal , Denis Milan , Magali San Cristobal , Andre A. Eggen
Genetics Selection Evolution, 2002, 34 (3), pp.275-305. ⟨10.1051/gse:2002009⟩
Journal articles hal-02670063v1
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ChickRH6: a chicken whole-genome radiation hybrid panel

Mireille Morisson , Alexis Lemiere , Serge Bosc , M. Galan , Florence Plisson-Petit
Genetics Selection Evolution, 2002, 34 (4), pp.521-533. ⟨10.1051/gse:2002021⟩
Journal articles hal-02679285v1

Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds

N.A. Rosenberg , T. Burke , K. Elo , M.W. Feldman , P.J. Freidlin
Genetics, 2001, 159, pp.699-713
Journal articles hal-02679419v1

Recherche des zones du génone contrôlant l'émotivité chez la caille.

Odile Roussot , Frederique Pitel , Alain Vignal , J.M. Faure , A. Mills
British Poultry Science, 2001, suppl.,, pp.S28-S29
Journal articles hal-02679977v1

Effect of two candidate genes on a Salmonella carrier-state in chicken

Catherine C. Beaumont , J. Protais , Frederique Pitel , Florence Plisson-Petit , P. Colin
British Poultry Science, 2001, 42 (sp.), pp.S21-S22
Journal articles hal-02669554v1

QTL detection using bulked segregant analysis with microsatellite or AFLP markers in layers divergently selected for residual food consumtion

Frederique Pitel , Katia K. Feve , Alain Vignal , Michèle Tixier-Boichard , Jean-Luc J.-L. Coville
British Poultry Science, 2001, 42 (sp.), pp.S27-S28
Journal articles hal-02670300v1

Assignment of TERF1 to chicken chromosome 2q32 and TERF2 to chicken chromosome 11 by fluorescence in situ hybridization.

Valerie Fillon , R. Critcher , K.M. Baird , J.P. Konrad , Alain Vignal
Cytogenetics and Cell Genetics, 2001, 92, pp.175-176
Journal articles hal-02677842v1

QTL mapping for emotionality in quail

Odile Roussot , Frederique Pitel , Alain Vignal , J.M. Faure , A. Mills
British Poultry Science, 2001, 42 (sp.), pp.S28-S29
Journal articles hal-02673001v1

Comparative avian cytogenetics: establishment of chromosome correspondence by fluorescent in situ hybridisation

Valerie Fillon , Mireille Vignoles , A. Garrigues , R.P. Crooijmans , Martien A.M Groenen
British Poultry Science, 2001, 42 (sp.), pp.S23-S24
Journal articles hal-02680822v1

Development of 112 unique expressed sequence tags from chicken liver using an arbitrarily primed reverse transcriptase-polymerase chain reaction and single strand conformation gel purification method

Wilfrid Carré , Christian Diot , R.P.M.A. Crooijmans , Sandrine Lagarrigue , Mark Morrisson
Animal Genetics, 2001, 32, pp.289-297
Journal articles hal-02674219v1

A consensus linkage map of the chicken genome

Martien A.M Groenen , H.H. Cheng , N. Bumstead , B.F. Benkel , W.E. Briles
Genome Research, 2000, 10, pp.137-147
Journal articles hal-02697258v1

The chicken LEP (OB) gene has not been mapped

Frederique Pitel , C. Monbrun , Joel Gellin , Alain Vignal
Animal Genetics, 2000, 31, pp.280-291
Journal articles hal-02685750v1

First report on chicken genes and chromosomes 2000

M. Schmid , I. Nanda , M. Guttenbach , Alain Vignal , Valerie Fillon
Cytogenetics and Cell Genetics, 2000, 90, pp.169-218
Journal articles hal-02690766v1
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Etat de la carte de la poule

Alain Vignal
Productions Animales, 2000, HS 2000, pp.113-114
Journal articles hal-02685748v1

Cloning and mapping of the ACLY gene to a chicken microchromosome

Stéphanie Daval , Frederique Pitel , C. Le Nigen , M. Douaire , Alain Vignal
Animal Genetics, 2000, 31, pp.404-419
Journal articles hal-02686283v1

Le locus retroviral EV1 marqueur associé au développement des tumeurs induites par le virus du sarcome de Rous chez le poulet

P. Thoraval , Michèle Tixier-Boichard , Alain Vignal , Denis Soubieux , D. Bouret
Biology of the Cell, 2000, 92 (1), pp.14
Journal articles hal-02690135v1
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Mapping the naked neck (NA) and polydactyly (PO) mutants of the chicken with microsatellite molecular markers

Frederique Pitel , Romain Bergé , Gérard Coquerelle , R. Crooijmans , Martien A.M Groenen
Genetics Selection Evolution, 2000, 32 (4), pp.73-86. ⟨10.1051/gse:2000107⟩
Journal articles hal-02696763v1
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Bases de données en biologie

Alain Vignal
Productions Animales, 2000, HS 2000, pp.187-189
Journal articles hal-02691513v1

New markers for the integration of chicken microchromosome cytogenetic and genetic maps

Valerie Fillon , Frederique Pitel , Mireille Morisson , A. Pouzadoux , Romain Bergé
Allattenyesztes es Takarmanyozas, 1999, 48, pp.75-77
Journal articles hal-02693656v1

Characterisation of 33 chicken microsatellite loci: 20 new locations on reference maps

Mireille Morisson , Florence Plisson-Petit , D. Dawson , Frederique Pitel , Valerie Fillon
Animal Genetics, 1999, 30, pp.382-405
Journal articles hal-02690767v1

Characterization of 33 chicken microsatellite loci: 20 new locations on reference maps.

Mireille Morisson , Florence Plisson-Petit , D. Dawson , Frederique Pitel , Valerie Fillon
Animal Genetics, 1999, 30, pp.391-393
Journal articles hal-02689459v1

Mapping of the LEP (OB) gene to a chicken microchromosome

Frederique Pitel , C. Monbrun , Joel Gellin , Alain Vignal
Animal Genetics, 1999, 30, pp.66-80
Journal articles hal-02693198v1

Identification of 16 chicken microchromosomes by molecular markers using two-colour fluorescence in situ hybridization (FISH).

Valerie Fillon , Mireille Morisson , R. Zoorob , Claudie Auffray , M. Douaire
Chromosome Research, 1998, 6 (4), pp.307-313
Journal articles hal-02693344v1

Integration of chicken cytogenetic and genetic map: 18 new polymorphic markers isolated from BAC and PAC clones

Mireille Morisson , Frederique Pitel , Valerie Fillon , A. Pouzadoux , Romain Bergé
Animal Genetics, 1998, 29, pp.348-355
Journal articles hal-02688728v1

Mapping of FASN and ACACA on two chicken microchromosomes disrupts the human 17q syntenic group well conserved in mammals

Frederique Pitel , Valerie Fillon , N. Le Fur , C. El Khadir-Mounier , M. Douaire
Mammalian Genome, 1998, 9 (4), pp.297-300
Journal articles hal-02692469v1

Mapping a major gene affecting skeletal growth in chicken with microsatellite markers and DNA pools.

Michèle Tixier-Boichard , Frederique Pitel , Romain Bergé , Joël Gellin , A. Bordas
Animal Genetics, 1998, suppl. 1, pp.73
Journal articles hal-02693302v1

Mapping of the ME1 locus to chicken chromosome 3.

Frederique Pitel , Sandrine Lagarrigue , M. Moro , M. Douaire , Joel Gellin
Animal Genetics, 1998, 29 (6), pp.475-476
Journal articles hal-02685474v1

Mapping the chicken SCD1 locus : assignment of a link group to chromosome 6.

Frederique Pitel , A. Pouzadoux , Paul Langlois , Valerie Fillon , Claire Heimel
Animal Genetics, 1998, 29 (2), pp.152-153
Journal articles hal-02691004v1

Assignment of Stearoyl Coenzyme A Desaturase gene (SCD1) to chicken chromosome R-band 6q 14 by in situ hybriization

Valerie Fillon , Paul Langlois , M. Douaire , Joel Gellin , Alain Vignal
Cytogenetics and Cell Genetics, 1997, 78, pp.229-230
Journal articles hal-02688020v1

Seven mapped polymorphic chicken microsatellite markers

E. Dufour , Mireille Morisson , Romain Bergé , Alain Vignal
Animal Genetics, 1997, 28, pp.59-60
Journal articles hal-02686086v1

Chicken major histocompatibility complexes B and Rfp-Y map to the same microchromosome

Alain Vignal , Valerie Fillon , R. Zoorob , Claudie Auffray , Joel Gellin
Animal Genetics, 1996, 27 (Suppl-2), pp.69
Journal articles hal-02688369v1

Localization of the avian fatty acid synthase gene to a conserved region between a chicken microchromosome and human chromosome 17q

Frederique Pitel , Valerie Fillon , N. Le Fur , N. Bumstead , Alain Vignal
Animal Genetics, 1996, 27 (Suppl-2), pp.67
Journal articles hal-02687977v1

Mapping of the genetically independent chicken major histocompatibility complexes B and RFP-Y to the same microchromosome by two-color fluorescent in situ hybridization

Valerie Fillon , R. Zoorob , Martine M. Yerle , Claudie Auffray , Alain Vignal
Cytogenetics and Cell Genetics, 1996, 75, pp.7-9
Journal articles hal-02690147v1

Towards the integration of the chicken genetic and cytogenetic maps

Mireille Morisson , Valerie Fillon , A. Pouzadoux , Romain Bergé , R. Zoorob
Animal Genetics, 1996, 27 (Suppl-2), pp.67
Journal articles hal-02688430v1

Current state of the genetic map of the chicken

Patricia Mariani , L.B. Crittenden , H.H. Cheng , H.M. Wain , Alain Vignal
Animal Genetics, 1996, 27 (Suppl-2), pp.67
Journal articles hal-02687039v1

Two chicken genomic libraries in the PAC and BAC cloning systems: Organization and characterization

R. Zoorob , Arnaud Billault , V. Severac , Valerie Fillon , Alain Vignal
Animal Genetics, 1996, 27 (Suppl-2), pp.69
Journal articles hal-02686106v1

Localization of Friedreich ataxia phenotype with selective vitamin E deficiency to chromosome 8q by homozygosity mapping

C. Ben Hamida , N. Doerflinger , S. Belal , C. Linder , L. Reutenauer
Nature Genetics, 1993, 5 (2), pp.195-200. ⟨10.1038/ng1093-195⟩
Journal articles hal-03104221v1
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Relationship between Charcot-Marie-Tooth-1a and Smith-Magenis regions: snu3 may be a candidate gene for the Smith-Magenis syndrome

Christophe Chevillard , Denis Le Paslier , Edith Passage , Pierre Ougen , Alain Billault
Human Molecular Genetics, 1993, 2 (8), pp.1235-1243. ⟨10.1093/hmg/2.8.1235⟩
Journal articles hal-01593101v1

La carte génétique de la poule

Alain Vignal
Bulletin de l'Académie Vétérinaire de France, 1993, 66 (6), pp.87-98
Journal articles hal-02701818v1

GENOME WIDE ASSOCIATION STUDY ON VARROA RESISTANCE TRAITS IN FRENCH HONEYBEE POPULATIONS

Sonia E. Eynard , Alain Vignal , Benjamin B. Basso , Olivier Bouchez , Tabatha Bulach
9th European Congress of Apidology, Sep 2022, Belgrade, Serbia
Conference papers hal-03855289v1

In search of the honey bee centromeres: regions with tandem repeats high at content and low recombination rates

Alain Vignal , Sonia E Eynard , Christophe C. Klopp , Bertrand Servin , Kamila Canale-Tabet
9th European Congress of Apidology, Sep 2022, Belgrade, Serbia
Conference papers hal-03855207v1

Genotyping By Pool Sequencing Eusocial Colonies and Its Applications to Honeybee

Sonia E Eynard , Alain Vignal , Benjamin B. Basso , Yves Le Conte , Kamila Tabet
XXVIIII Plant and Animal Genome, Jan 2022, San Diego (CA), France
Conference papers hal-04473343v1

Statistics for an accurate genome wide association study on Varroa resistance trait in a French honeybee

Sonia E Eynard , A. Vignal , Yves Agez , Benjamin B. Basso , Olivier Bouchez
World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands
Conference papers hal-03859236v1
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Mise au point d'un panel d'assignation de parenté SNP unique pour deux espèces de canards et leur hybride

Sophie Brard-Fudulea , Hervé Chapuis , Sophie Leroux , Romuald Rouger , Alain Vignal
14. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Itavi, Mar 2022, Tours, France. pp.628, ⟨10.1016/j.anscip.2022.05.026⟩
Conference papers hal-03617695v1

Statistical models for the genetic characterisation of honeybee colonies from whole genome pool sequencing data.

Sonia E Eynard , Alain Vignal , Christina Sann , Fanny Mondet , Benjamin B. Basso
PopGroup 54, Jan 2021, Online, France
Conference papers hal-04473366v1
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Statistical Imputation of Queen Genotype from Pool Sequencing of Workers

Bertrand Servin , Sonia Eynard , Fanny Mondet , Lucie Genestout , Olivier Bouchez
PLant and Animal Genome, Jan 2020, San Diego, United States
Conference papers hal-02938108v1

Avian Genomics in Animal Breeding: Do we still need model organisms?

Alain Vignal
28. Plant and Animal Genome Conference, Jan 2020, San Diego, United States
Conference papers hal-02937603v1

NGS et Assemblage des génomes

Alain Vignal
2. Workshop Génomique : structure et fonction des génomes, Université des Sciences et de la Technologie d’Oran, Jun 2019, Oran, Algérie
Conference papers hal-02953942v1

Characterisation of the genotype of honey bee colonies from pool sequences

Sonia Eynard , Christina Sann , Fanny Mondet , Benjamin Basso , Kamila Canale-Tabet
46. APIMONDIA - International Apicultural Congress, Sep 2019, Montreal, Canada
Conference papers hal-02789560v1

BeeStrong : towards a genomic tool for the selection of varroa resistant honey bees

Christina Sann , Yannick Poquet , Benjamin B. Basso , Sonia Eynard , Bertrand Servin
46. APIMONDIA - International Apicultural Congress, Sep 2019, Montreal, Canada
Conference papers hal-02788639v1
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Development and validation of high-density SNP array in ducks

Marc Teissier , Noémie Thébault , Juliette Riquet , Christian Diot , Sophie Brard-Fudulea
XIth European symposium on poultry genetics (ESPG), Oct 2019, Prague, Czech Republic
Conference papers hal-02460148v1

Séquençage du génome entier et diversité génétique de populations sauvages et domestiques de pintade

Alain Vignal , Simon Boitard , N Thébault , Guiguigbaza-Kossigan Dayo , V. Yapi-Gnaorale
13. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2019, Tours, France. 929 p
Conference papers hal-02737420v1

Caractérisation génétique et génomique des populations d’abeille par séquençage de génome

Alain Vignal
2. Workshop Génomique : structure et fonction des génomes, Université des Sciences et de la Technologie d’Oran, Jun 2019, Oran, Algérie
Conference papers hal-02953949v1

Développement d'un panel de marqueurs SNP pour détecter l'hybridation entre la caille des blés et la caille japonaise

Romuald Rouger , Sophie Brard-Fudulea , Noémie Thébault , Frederique Pitel , Alain Vignal
13. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, ITAVI; INRA; ANSES, Mar 2019, Tours, France. pp.80-84
Conference papers hal-02383509v1
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Whole-genome sequencing of Honeybees from New Caledonia

Diane Bailleul , David Wragg , Romain Gueyte , Benjamin Bassot , Yves Le Conte
46th APIMONDIA - International Apicultural Congress, Sep 2019, Montréal, Canada
Conference papers hal-02736059v1

Développement d’une puce de génotypage haute densité 600K pour le canard commun et le canard de Barbarie

Noémie Thébault , Juliette Riquet , Christian Diot , Sophie Brard-Fudulea , Daniel Guemene
13. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2019, Tours, France
Conference papers hal-02738413v1
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Practical applications of genomic assignment methods in the avian breeding industry

Romuald Rouger , Marc Teissier , Sophie Brard-Fudulea , Noémie Thébault , Juliette Riquet
XIth European symposium on poultry genetics (ESPG), Oct 2019, Prague, Czech Republic
Conference papers hal-02460150v1

Sauropsida ribosomal repeat : Deciphering of the intergenic spacer in chicken and terrapin

Alexander Dyomin , Svetlana Galkina , Valerie Fillon , Stephane Cauet , Celine Lopez-Roques
37. International Society for Animal Genetics Conference (ISAG), Jul 2019, Lleida, Spain
Conference papers hal-02786983v1
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Guinea fowl domestication : new insights from the first whole genome assembly and the pool sequencing of wild and domestic populations

Simon Boitard , Alain Vignal , Noémie Thébault , Michèle Tixier-Boichard , Xavier X Rognon
II Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France
Conference papers hal-02785577v1

Explaining the resistance to Varroa destructor in the French honey bee population with VSH, SMR and colony dynamic data

Sonia Eynard , Benjamin Basso , Anne-Laure Guirao , Fanny Mondet , Alain Vignal
8. Congress of Apidology (EurBee 8), Sep 2018, Ghent, Belgium
Conference papers hal-02785764v1

Improving the knowledge of microchromosome repeated sequences in chicken by the sequencing of BAC clones with Pacific Bio technology

Valerie Fillon , Christophe C. Klopp , Yvette Lahbib Mansais , Noémie Thébault , Celine Lopez-Roques
23. International Colloquium on Animal Cytogenetics and Genomics (ICACG), Jun 2018, Saint-Petersburg, Russia. 360 p
Conference papers hal-02733811v1

The use of interspecific hybrid chromosomes as a tool for precise comparative mapping analysis

Christelle Marrauld , Maria M. Kulak , Svetlana S. Galkina , Alain Vignal , David Gourichon
23. International Colloquium on Animal Cytogenetics and Genomics (ICACG), Jun 2018, Saint Petersburg, Russia. 360 p., ⟨10.3897/CompCytogen.v12i3.27448⟩
Conference papers hal-02734313v1

De novo genome assembly of a western European Apis mellifera mellifera black bee

Alain Vignal , Sonia Eynard , Christophe C. Klopp , Kamila Canale-Tabet , William Marande
8. Congress of Apidology (EurBee 8), Sep 2018, Ghent, Belgium
Conference papers hal-02785743v1

Genomics of Chicken Domestication

Mahendra Mariadassou , Marie Suez , Pierre Nicolas , Diane Esquerré , Alain Vignal
10. European Symposium on Poultry Genetics, Jun 2017, Saint Malo, France
Conference papers hal-02785437v1

Guinea fowl whole genome assembly and application for genetic diversity in African and European populations

Alain Vignal , Noémie Thébault , Simon Boitard , Valentine Yapi-Gnaore , Issaka Youssao
10. European Symposium on Poultry Genetics, Jun 2017, Saint Malo, France
Conference papers hal-02785442v1
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Analyse de populations d’abeilles par séquençage de génomes

Alain Vignal , David Wragg , Benjamin B. Basso , Maxime Béguin , Kamila Canale-Tabet
5. Journées de la Recherche Apicole, Feb 2017, Paris, France
Conference papers hal-02791452v1

A linkage disequilibrium study in a layer chicken population

Rémi Robert , Frédéric Herault , Hélène Romé , Amandine Varenne , Hervé Chapuis
9. European Symposium on Poultry Genetics, Jun 2015, Tuusula, Finland
Conference papers hal-01580637v1
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GWAS analysis identifies 138 QTL for egg quality variance in layers receiving various diets

Hélène Romé , Amandine Varenne , Frédéric Herault , Hervé Chapuis , Christophe Alleno
9. European Symposium on Poultry Genetics (ESPG), Jun 2015, Tuusula, Finland
Conference papers hal-01580651v1
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Effet du type de maïs en gavage et de la durée de jeûne avant abattage sur les caractéristiques biochimiques et génomiques fonctionnelles du foie gras chez le canard mulard

Cécile Bonnefont , Rawane El Kouba , Marina Travanca , Sébastien Dejean , Alain Vignal
11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. pp.5
Conference papers hal-01158739v1
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Le séquençage de populations d’abeilles : vers la compréhension de la dynamique du génome

David Wragg , Benjamin B. Basso , Yves Le Conte , Jean Pierre Bidanel , Alain Vignal
3. Journées de la Recherche Apicole, Feb 2015, Paris, France
Conference papers hal-02793409v1
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Sequencing haploid drones from royaljelly and honey bee populations for detection of differentiation and selective sweeps

David Wragg , Benjamin Basso , Yves Le Conte , Jean Pierre Bidanel , Alain Vignal
Biology and Genomics of Social Insects, May 2015, New York, United States
Conference papers hal-02792618v1
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Les QTL protéiques : un outil de compréhension de la qualité du foie gras ?

Yoannah François , Caroline Molette , Alain Vignal , Stephane Davail , Christel C. Marie-Etancelin
11. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Mar 2015, Tours, France. 1241 p
Conference papers hal-02738993v1
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De novo Assembly of the Chinese Bamboo-Partridge Genome and Comparison with Chicken

Gabriel Rognon , Diane Esquerre , Sylvain Foissac , Alain Vignal , Jean-Luc Coville
Plant and Animal Genome (PAG), Jan 2015, San Diego, United States
Conference papers hal-01194054v1

Sequencing haploid drones from royal jelly and honey bee populations for detection of differentiation and selective sweeps

Alain Vignal , Yves Le Conte , Jean Pierre Bidanel
The Biology of Genomes, May 2015, New York, United States
Conference papers hal-01536441v1

de novo Assembly of the Chinese Bamboo-Partridge Genome and Comparison with Chicken

Alain Vignal
Plant and Animal Genome Conference, Jan 2015, San Diego, United States
Conference papers hal-02791971v1

Sequencing haploid drones from royal jelly and honey bee populations for detection of differentiation and selective sweeps

David Wragg , Benjamin Basso , Yves Le Conte , Jean Pierre Bidanel , Alain Vignal
Biology and Genomics of Social Insects, Cold Spring Harbor (CSH), May 2015, Wisconsin-Madison, United States
Conference papers hal-02794236v1

Genetic and genomic characterization of french bee populations

Benjamin Basso , Alain Vignal , Maxime Beguin , David Wragg , Jean Pierre Bidanel
Research Network for Sustainable Bee Breeding/COLOSS WS, Feb 2015, Kirchhain, Germany
Conference papers hal-02793154v1
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Resistance to varroa and VSH behaviour in the honey bee

Fanny Mondet , Benjamin B. Basso , Alain Vignal , Maxime Beguin , David Wragg
Research Network for Sustainable Bee Breeding/COLOSS WS, Feb 2015, Kirchhain, Germany
Conference papers hal-02795145v1

Population genomics and signatures of selection in resequenced honey bee drones

David Wragg , Benjamin Basso , Jean Pierre Bidanel , Y. Leconte , Alain Vignal
66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p
Conference papers hal-01536475v1
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Mule duck “foie gras” show different metabolic states according to their quality phenotypes by using a proteomic approach. Comparison of 2 statistical methods

Yoannah François , Christel C. Marie-Etancelin , Alain Vignal , Didier D. Viala , Stephane Davail
5. Management Committee Meeting and the 4. Meeting of Working Groups 1, 2, 3 of COST Action FA 1002, Nov 2014, Milan, Italy
Conference papers hal-02742729v1
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Genetic parameters and QTL detection of social behaviors, fear behaviors and production traits in Japanese Quail

Julien Recoquillay , Christine Leterrier , Frederique Pitel , Ludovic Calandreau , Aline Bertin
14. European Poultry Conference, Jun 2014, Stavanger, Norway
Conference papers hal-02740135v1
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Detection Of Pleiotropic QTL Related To Protein Expression And Foie Gras Quality Traits

Yoannah François , Caroline Molette , Alain Vignal , Stéphane Davail , Christel C. Marie-Etancelin
10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada
Conference papers hal-02739759v1

Transcriptome-wide investigation of genomic imprinting in chicken

Laure Fresard , Sophie Leroux , Bertrand Servin , David Gourichon , Patrice Dehais
22. International Plant and Animal Genome (PAG), Jan 2014, San Diego, United States
Conference papers hal-01193927v1

Numerous interchromosomal rearrangements in spite of high synteny conservation between duck and chicken

Valerie Fillon , Man Rao , Thomas Faraut , Daren Griffin , Mireille Morisson
21. International Colloquium on Animal Cytogenetics and Gene Mapping, Jun 2014, Ischia, Italy
Conference papers hal-02793231v1
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Evidence of genetic relationships between sociality, emotional reactivity and production traits in Japanese quail

Julien Recoquillay , Christine Leterrier , Ludovic Calandreau , Aline Bertin , Frederique Pitel
10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada
Conference papers hal-02740153v1
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Mapping by RH sequencing: organizing NGS scaffolds into chromosomes

Man Rao , Mireille Morisson , Valerie Fillon , Sophie S. Leroux , Emeline Lhuillier
21. P!ant and animal genome meeting (PAG XXI), Jan 2013, San Diego, Californie, United States
Conference papers hal-02749835v1
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Detection de SNP chez la caille : production d'un outil commum pour des programmes scientifiques multiples

Sophie Leroux , Patrice Dehais , Alain Vignal , Olivier Bouchez , Thomas Faraut
10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). Nouzilly, FRA. Institut National de la Recherche Agronomique (INRA). Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), FRA., Mar 2013, La Rochelle, France
Conference papers hal-01190264v1
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Optimisation d’une population expérimentale de canes communes (Anas platyrhynchos) et de leurs descendants mulards : utilisation de données de QTL

Yoannah François , Christel Marie Etancelin , Caroline Molette , Alain Vignal , Stephane Davail
10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA.; Comité Interprofessionnel des Palmipèdes à Foie Gras (CIFOG). Paris, FRA.; Institut National de la Recherche Agronomique (INRA). Paris, FRA., Mar 2013, La Rochelle, France. 279 p
Conference papers hal-02748711v1

Analyse de transcriptomes de foies de canards par séquençage d’ARN (RNA-Seq)

Christian Diot , Magalie Houee , Olivier Demeure , Elisabeth Baéza , Alain Vignal
10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, La Rochelle., Mar 2013, La Rochelle, France
Conference papers hal-01210404v1
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Avancées récentes en génomique des canards

Alain Vignal , Christian Diot , Caroline Molette , Christel Marie-Etancelin
10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). Paris, FRA.; Comité Interprofessionnel des Palmipèdes à Foie Gras (CIFOG). Paris, FRA.; Institut National de la Recherche Agronomique (INRA). Paris, FRA., Mar 2013, La Rochelle, France. 279 p
Conference papers hal-01210409v1

SNP-BB : Recherche de QTL pour des caractères de comportement social et de production chez l'oiseau

Christine Leterrier , Cécile Arnould , Ludovic Calandreau , Aline Bertin , David Gourichon
Colloque Génomique Animale et Microbienne, AGENAE - Analyse du Génome des Animaux d'Elevage (AGENAE). Labo/service de l'auteur, FRA., Mar 2012, La Rochelle, France
Conference papers hal-02746131v1
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Transcriptome-wide investigation of genomic imprinting in chicken

Laure L. Fresard , Sophie S. Leroux , David Gourichon , Magali San Cristobal , Nathalie N. Marsaud
33. Conference of the International Society for Animal Genetics, Jul 2012, Cairns, Australia. pp.75
Conference papers hal-01000657v1
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SNP detection for QTL analysis of social behaviour and production traits in quail

Frederique Pitel , Sophie Leroux , Patrice Dehais , Alain Vignal , Olivier Bouchez
33rd Conference of the International Society for Animal Genetics, Jul 2012, Cairns, Australia
Conference papers hal-01191281v1

Détection de QTLs liés à l'efficacité alimentaire de la poule pondeuse dans des lignées divergentes

Thomas T. Heams , Tatiana Zerjal , Bertrand B. Bed'Hom , Alain Vignal , Olivier O. Demeure
9. Journées de la Recherche Avicole, Mar 2011, Tours, France. pp.775-778
Conference papers hal-01000377v1

Détection de QTLs liés à l'efficacité alimentaire de la poule pondeuse dans des lignées divergentes

Thomas Heams , Tatiana Zerjal , Bertrand Bed'Hom , Alain Vignal , Olivier Demeure
9. Journées de la Recherche Avicole, Mar 2011, Tours, France
Conference papers hal-01189527v1

Développement de SNP chez la caille par séquençage haut-débit

Sophie S. Leroux , Katia K. Feve , Florence F. Vignoles , Olivier O. Bouchez , Laure Frésard
9. Journées de la Recherche Avicole, Mar 2011, Tours, France
Conference papers hal-02750356v1

Identification of a new QTL for resistance to Salmonella carrier-state

Fanny Calenge , Alain Vignal , Katia K. Feve , Philippe Velge , Catherine C. Beaumont
9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany
Conference papers hal-02750500v1

Pyroséquençage pour le développement d'EST et de SNP (PYRESAVI) chez le canard

Frederique Pitel , Sophie S. Leroux , Katia K. Feve , Florence F. Vignoles , Cécile C. Duby
9. Journées de la Recherche sur les Palmipèdes à Foie Gras, Oct 2010, Bordeaux, France
Conference papers hal-02758288v1

Recherche de QTL chez le canard commum. Recherche de QTL impliqués dans le comportement, la résistance au portage de Salmonelles et la qualité des produits - foie gras et magret - du canard Mulard

Christel Marie Etancelin , Alain Vignal , Xavier Fernandez , S. Davail , Elisabeth Baéza
VIII. Colloque AGENAE-GENEANIMAL, Nov 2010, Bordeaux, France
Conference papers hal-02757579v1

Primo-localisation de QTL d'aptitude au gavage et de qualité des produits du canard

Mohamed M. Kileh Wais , Jean Michel J. M. Elsen , Katia K. Feve , Florence F. Vignoles , Xavier Fernandez
9. Journées de la Recherche sur les Palmipèdes à Foie Gras, Oct 2010, Bordeaux, France
Conference papers hal-02755739v1

Biology of fear in birds: multidisciplinary analysis of a genetic model

Christine Leterrier , Cécile Arnould , Ludovic Calandreau , Aline Bertin , Catherine Beaumont
5. European Conference on Behavioural Biology (ECBB), Jul 2010, Ferrara, Italy
Conference papers hal-01193568v1

Development of polymorphic markers in quail by new generation sequencing

Florence Vignoles , Katia Feve , Sophie Leroux , David Gourichon , Christine Leterrier
13. European Poultry Conference (EPC 2010), Aug 2010, Tours, France
Conference papers hal-01193587v1

Identification de la mutation responsable de l'épilepsie réflexe photosensible chez le poulet

Marine Douaud , Katia Feve , F. Pituello , F. Medevielle , David Gourichon
8. Journées de la Recherche Avicole, Mar 2009, Saint-Malo, France
Conference papers hal-01193413v1
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Cartographie intégrée du microchromosome 16, porteur du complexe majeur d'histocompatibilité, chez la poule.

Sophie Leroux , Romain Solinhac , S. Galkina , Katia Feve , S. Derjusheva
8. Journées de la Recherche Avicole, Mar 2009, Saint-Malo, France
Conference papers hal-01193434v1
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Stratégie de cartographie intégrée du microchromosome 16 porteur du Complexe Majeur d'Histocompatibilité et des régions organisatrices du nucléole chez la poule domestique (Gallus gallus).

Romain Solinhac , Sophie S. Leroux , Svetlana Galkina , S. Derjusheva , E. Gaginskaya
GDR de Cytogénomique, 2009, Rennes, pp.Inconnu
Conference papers hal-02822388v1

Elaboration de la carte génétique du canard commun dans le cadre du programme de recherche GENECAN .

Katia K. Feve , Marie Bounet , Florence F. Vignoles , Sophie S. Leroux , Suzanne Bardes
8. Journées de la Recherche Avicole, Mar 2009, Saint-Malo, France
Conference papers hal-02752593v1
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Pyroséquençage pour le développement d'EST et de SNP aviaires

Frederique Pitel , Alain Vignal , Sophie Leroux , Katia Feve , Florence Vignoles
8èmes Journées de la Recherche Avicole, Mar 2009, Paris (FR), France. pp.594-598
Conference papers hal-00730058v1

Recherche de QTL chez le canard à gaver : dispositif et développements méthodologiques.

Christel Marie-Etancelin , Katia K. Feve , Francois F. Dubos , Marie-Dominique M.-D. Bernadet , S. Davail
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau
Conference papers hal-02752584v1

Primo-localisation de QTL pour la qualité de la viande dans un croisement entre deux lignées de poulet divergentes pour la croissance.

J. Nadaf , Hélène Gilbert , Frederique Pitel , Cécile Berri , Katia K. Feve
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau
Conference papers hal-02757963v1

High resolution chicken radiation hybrid maps using the IlluminaTM technology.

Alain Vignal , Caroline Hourcade , Thomas Faraut , Sophie S. Leroux , Marine M. Douaud
31st Conference of the International Society of Animal Genetics (ISAG), 2008, Amsterdam, pp.Inconnu
Conference papers hal-02815790v1

Des QTL aux gènes de résistance au portage de salmonelles chez le poulet

Fanny Calenge , Frédéric Lecerf , N. Sellier , P. Velge , P. Fravalo
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau (FR), France
Conference papers hal-00729117v1

Identification de la mutation responsable de l'épilepsie réflexe photosensible chez le poulet.

Marine M. Douaud , Katia K. Feve , F. Pituello , David Gourichon , Michèle Tixier-Boichard
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau
Conference papers hal-02753026v1

Elaboration de la carte génétique du canard commun. Dans le cadre du programme de recherche "GENECAN"

Katia K. Feve , Marie Bounet , Sophie S. Leroux , Suzanne Bardes , Alain Vignal
8. Journées de la Recherche sur les Palmipèdes à Foie Gras, Oct 2008, Arcachon, France
Conference papers hal-02756303v1

Des QTL aux gènes de résistance au portage de salmonelles chez le poulet.

Fanny Calenge , Frédéric Lecerf , Nadine N. Sellier , Philippe Velge , P. Fravalo
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau
Conference papers hal-02753088v1

Projet de pyroséquençage pour le développement d'EST et de SNP aviaires.

Frederique Pitel , Alain Vignal , Sophie S. Leroux , Katia K. Feve , Aurelie Secula Tircazes
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau
Conference papers hal-02756545v1

Cartographie d'irradiation chez la poule : cartographie dense de SNP et localisation d'EST absentes de la séquence génomique.

Alain Vignal , I. Gut
Séminaire AGENAE, La Rochelle, Oct 2008, France, pp.Inconnu
Conference papers hal-02816058v1

Completing the chicken genome coverage by radiation hybrid mapping.

Mireille Morisson , Suzanne Bardes , Marine M. Douaud , Frederique Pitel , Sophie S. Leroux
Plant & Animal Genomes, XVI Conference, 2008, Inconnu, pp.Inconnu
Conference papers hal-02818750v1

Localisation of the causative gene for reflex epilepsy in chicken

Marine M. Douaud , Katia K. Feve , Michèle Tixier-Boichard , David Gourichon , Agathe A. Vieaud
31. Conference of the International Society of Animal Genetics (ISAG), 2008, Amsterdam, Netherlands
Conference papers hal-02816161v1

Recherche de manifestations épigénétiques chez la poule

Mireille Morisson , Olivier O. Demeure , Christophe C. Klopp , Yvette Lahbib Mansais , David Gourichon
Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau, France
Conference papers hal-02821618v1

An integrated approach of genetic resistance to Salmonella carrier state in fowls: from genetics to genomics and modelling

Catherine C. Beaumont , Frédéric Lecerf , J Protais , Fanny Calenge , Kevin Prevost
International Symposium on Animal Genomics for Animal Health (AGAH), World Organisation for Animal Health (OIE). INT., Oct 2007, Paris, France. ⟨10.1159/000317185⟩
Conference papers hal-02752859v1

An integrated approach of genetic resistance to salmonella carrier-state in fowls: from genetics to genomics and modelization.

Catherine C. Beaumont , Frédéric Lecerf , J. Protais , Kevin Prevost , Anne-Christine Lalmanach
International Symposium on Animal Genomics for Animal Health (AGAH), 2007, Paris, pp.Inconnu
Conference papers hal-02815742v1

Cartographie d'irradiation chez la poule : cartographie dense de SNP et localisation d'EST absentes de la séquence génomique.

Mireille Morisson , Suzanne Bardes , Sophie S. Leroux , Marine M. Douaud , Frederique Pitel
du séminaire AgenaeGenanimal, 15-16 octobre 2007, Oct 2007, Dourdan
Conference papers hal-02756339v1

Primo-localisation de QTLs pour la qualité de la viande dans un croisement entre deux lignées de poulet divergentes pour la croissance

Javad Nadaf , Hélène Gilbert , Frederique Pitel , Cécile Berri , Katia K. Feve
7. Journées de la Recherche Avicole, Mar 2007, Tours, France
Conference papers hal-02755621v1

Localisation de QTL contrôlant les poids de gras abdominal et de filet sur le chromosome 5 du poulet

Guillaume G. Le Mignon , Frederique Pitel , Olivier O. Demeure , Hélène Gilbert , Florence F. Vignoles
7. Journées de la Recherche Avicole, Mar 2007, Tours, France
Conference papers hal-02755614v1

Radiation hybrid and genetic maps of GGA25, a microchromosome absent from the first draft chicken genome assembly.

Alain Vignal , M. Gerus , Marine M. Douaud , Frederique Pitel , Katia K. Feve
The biology of genomes, 10-14 may 2006, May 2006, Inconnu, pp.Inconnu
Conference papers hal-02816507v1

Microsatellite DNA markers for duck (Anas platyrhynchos and Cairina moschata).

Christel Marie-Etancelin , Katia K. Feve , Carine Genet , G. Cardinet , Florence F. Vignoles
2006 Symposium COA/INRA Scientific Cooperation in Agriculture, 2006, Tainan, France
Conference papers hal-02757574v1

QTL analysis for meat quality traits and metabolic parameters in a F2 cross between low and high growth chicken lines

Elisabeth Le Bihan-Duval , Javad Nadaf , Frederique Pitel , Cécile Berri , Michel Jacques M.J. Duclos
14. Conference Plant and Animal Genomes, Jan 2006, San Diego, United States
Conference papers hal-02755644v1

Les marqueurs microsatellites du canard.

Katia K. Feve , Carine Genet , G. Cardinet , Florence F. Vignoles , Alain Vignal
7èmes Journées de la Recherche sur les Palmipèdes à Foie Gras, 2006, Arcachon, France
Conference papers hal-02752665v1

Etude des risques d'introgression génétique de la caille des blés (Coturnix coturnix coturnix) par la caille japonaise (C. c. japonica) : comparaison et intégration des données comportementales et moléculaires obtenues dans le sud-est de la France.

Olympe Chazara , Sophie Lumineau , Francis F. Minvielle , D. Roux , Katia K. Feve
Inconnu, Oct 2006, Inconnu
Conference papers hal-02757540v1

First QTLs for breast meat technological parameters in high or low growth chicken lines.

Elisabeth Le Bihan-Duval , J. Nadaf , Cécile Berri , Cécile Arnould , Frederique Pitel
8th World Congress on Genetics Applied to Livestock Production, Belo Horizonte, 2006, Brazil, pp.Inconnu
Conference papers hal-02814256v1

A radiation hybrid map of GGA25, a microchromosome absent from the first draft chicken genome assembly.

Alain Vignal , M. Gerus , Marine M. Douaud , Frederique Pitel , Katia K. Feve
XXX International Conference on Animal Genetics, 20-25 august 2006, Aug 2006, Brazil, pp.Inconnu
Conference papers hal-02822684v1

Sex by fatness QTL interaction with transgressive variation in fat and lean lines.

Behnam Abasht , Sandrine Lagarrigue , Frederique Pitel , Elisabeth Le Bihan-Duval , Pascale P. Le Roy
Gordon Conference on Quantitative Genetics and Genomics, 2005, Ventura, pp.Inconnu
Conference papers hal-02830385v1

Mapping of quantitative trait loci for fatness and breast meat yield in a novel resource population of broiler chickens

Samuel E. Aggrey , Wilfrid Carre , Xiaofei Wang , Frederique Pitel , Alain Vignal
13. Conference Plant and Animal Genomes, Jan 2005, San Diego, United States
Conference papers hal-02763137v1

Séquençage du génome de la poule et perspectives d'application en poule pondeuse.

Alain Vignal , B. Besbes
6èmes Journées de la Recherches Avicoles, Saint Malo, 2005, France
Conference papers hal-02764307v1

A radiation hybrid map chicken of chromosome 4.

T.S.K.M. Rabie , R.P.M.A. Crooijmans , J. Andryszkiewicz , Alain Vignal , M.A.M. Groenen
Plant and Animal Genome Conference XII, 2004, Inconnu, pp.Inconnu
Conference papers hal-02829250v1

Construction of a genetic linkage map in the Japanese quail and mapping of its plumage color genes.

M. Miwa , M. Inoue-Murayama , Y. Inoue , B.B. Kayang , Alain Vignal
103rd Conference of the Japanese Society of Animal Science, 2004, Tokyo
Conference papers hal-02760949v1