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Metabolic analysis of logical models infered from molecular interaction maps
S Aghakhani
,
A Niarakis
,
S Soliman
Building Immune digital twins, 2023, Orsay, France
Communication dans un congrès
hal-04482069v1
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Computational systems biology approaches for deciphering the immune-epithelial cellular interplay in Sjögren syndrome
S E Silva-Saffar
,
G Nocturne
,
A Niarakis
Building Immune digital twins, 2023, Orsay, France, France
Communication dans un congrès
hal-04482037v1
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Computational modeling of the cellular interplay in Rheumatoid Arthritis
N Zerrouk
,
F Augé
,
A Niarakis
Building Immune digital twins, 2023, Orsay, France
Communication dans un congrès
hal-04482055v1
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Computational systems biology approaches for deciphering the immune-epithelial cellular interplay in Sjögren syndrome
S E Silva-Saffar
,
G Nocturne
,
A Niarakis
Wellcome Connecting Science, 2022, Hinxton, Cambridge, United Kingdom
Communication dans un congrès
hal-04482088v1
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GREEKC COST ACTION Workshop
A. Niarakis
Introduction to Disease Maps: successes and challenges, 2021, Virtual conference, France
Communication dans un congrès
hal-04482157v1
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Do you speak Systems Biology? Shaping a common language for community work
A Niarakis
COMBINE, 2021, Online Conference, France
Communication dans un congrès
hal-04482103v1
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Invited Lecture at the Summer School, Logical Modeling for Experimental Design
A. Niarakis
Current and Future Biotechnology and Biomedicine, 2021, Trondheim ( Norvège), Norway
Communication dans un congrès
hal-04482132v1
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COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms
A. Niarakis
MSM Viral Pandemics meetings, 2021, Virtual conference, France
Communication dans un congrès
hal-04482169v1
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Executable Disease Networks: Building a large-scale Boolean model of fibroblasts in Rheumatoid Arthritis
A Niarakis
Sanofi Seminar Data Science Webinar Series, 2020, Chilly Mazarin, France
Communication dans un congrès
hal-04482315v1
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Introductory lecture: Modelling approaches in COVID-19 Disease Map project
A. Niarakis
5th Disease Map Community Meeting, 2020, Virtual conference, France
Communication dans un congrès
hal-04482236v1
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Automated inference of Boolean models from molecular interaction maps using CaSQ
A Niarakis
COMBINE, 2020, Virtual conference, France
Communication dans un congrès
hal-04482251v1
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COVID-19 Disease Map, a large-scale community effort to create graphical and executable models of SARS-CoV-2 virus-host interaction mechanisms
A. Niarakis
German Bioinformatics Conference, virtual, 2020, Virtual conference, France
Communication dans un congrès
hal-04482258v1
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Building graphical and computational models in biology
A Niarakis
ECCB 2020 Sitges Barcelona, 2020, Virtual conference, France
Communication dans un congrès
hal-04482263v1
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Automated inference of large-scale Boolean models, based on network topology and semantics of static molecular maps. Application on Rheumatoid Arthritis and the RA-map
A. Niarakis
MABioS Seminar I2M, 2020, Virtual conference, France
Communication dans un congrès
hal-04482291v1
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AI-assisted human biocuration of molecular mechanisms in the COVID-19 Disease Map project
A. Niarakis
AI BioSS, 2020, Virtual conference, France
Communication dans un congrès
hal-04482181v1
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Inference of a modular, large-scale Boolean network for modelling the Rheumatoid Arthritis fibroblast-like synoviocytes
Vidisha Singh
,
Soliman S
,
Anna Niarakis
5th Disease Map Community Meeting, 2020, Virtual conference, France
Communication dans un congrès
hal-04482346v1
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Automated inference of large-scale Boolean models, based on network topology and semantics of static molecular maps. Application on Rheumatoid Arthritis and the RA-map, I-STEM seminar, virtual, 15th of October 2020
A Niarakis
I-STEM seminar, 2020, Virtual conference, France
Communication dans un congrès
hal-04482282v1
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Automated inference of annotated Boolean models from molecular interaction maps using CaSQ
A. Niarakis
Workshop CoLoMoTo/SysMod, 2019, Basel, Switzerland
Communication dans un congrès
hal-04482431v1
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Executable Disease Maps – Addressing the challenges of large scale dynamical modelling
A. Niarakis
4th Disease Map Community Meeting, 2019, Seville, Spain
Communication dans un congrès
hal-04482380v1
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Executable Disease Networks -Building a large scale Boolean model for Rheumatoid Arthritis,
A Niarakis
Computational Biology for Complex Diseases, ENS, 2019, Cachan (Fr), France
Communication dans un congrès
hal-04482356v1
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Executable Disease Networks –Modelling the immune system in health and disease
A. Niarakis
Luxembourg Centre of Systems Biomedicine, 2019, Belval, Luxembourg
Communication dans un congrès
hal-04482365v1
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Automated Inference of Boolean Dynamics from molecular interaction maps
A. Niarakis
[BC]2, 2019, Basel, Switzerland
Communication dans un congrès
hal-04482422v1
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Automated pipeline for the inference of Boolean models from molecular interaction maps.
S. Pankaew
,
S. Soliman
,
T. Helikar
,
A. Niarakis
Logical modelling of cellular networks ECCB 2018 Workshop, 2018, Athens, Greece
Communication dans un congrès
hal-04482462v1
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Computational Systems Biology Approach For The Study Of Rheumatoid Arthritis: From A Molecular Map To A Dynamical Model , Invited Speaker, 21-22 June 2018 Institut Curie, Paris
A Niarakis
Disease Maps Community Meeting, 2018, Paris, France
Communication dans un congrès
hal-04482487v1
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Executable Disease Networks. Adding dynamics to molecular maps, Controlling Complex Networks: When Control Theory Meets Network Science
A Niarakis
Harvard Satellite Symposium of NetSci2018, 2018, Paris, France
Communication dans un congrès
hal-04482484v1
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Executable Disease Networks: Reconstruction, Topology, Dynamics
A. Niarakis
Cambridge Oncology Seminar Series, Cambridge Institute for Medical Research, 2018, Cambridge, United Kingdom
Communication dans un congrès
hal-04482441v1
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Disease Networks - Reconstruction, Topology, Dynamics. Towards an automated pipeline from static representations to executable disease models
A. Niarakis
BioNetVisA 2018 ECCB workshop, 2018, Athens, Greece
Communication dans un congrès
hal-04482457v1
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Integration Analysis And Modelling Of Cellular Networks For Complex Human Diseases
A Niarakis
Invited Speaker, CNRGH, CEA, 2018, Evry, France
Communication dans un congrès
hal-04482491v1
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Logical modelling of cellular decision processes with GINsim
Claudine Chaouiya
,
Aurélien Naldi
,
Lionel Spinelli
,
Pedro Monteiro
,
Duncan Berenguier
JOBIM 2012, Jul 2012, Rennes, France
Communication dans un congrès
hal-01261855v1
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