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Anne Gonzalez de Peredo

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Cerebrospinal fluid proteomics in recent-onset Narcolepsy type 1 reveals activation of the complement system

Ikram Ayoub , Yves Dauvilliers , Lucie Barateau , Thaïs Vermeulen , Emmanuelle Mouton-Barbosa
Frontiers in Immunology, 2023, 14, ⟨10.3389/fimmu.2023.1108682⟩
Article dans une revue hal-04291297v1
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Systems-level conservation of the proximal TCR signaling network of mice and humans

Philippe Nicolas , Jocelyn Ollier , Daiki Mori , Guillaume Voisinne , Javier Celis-Gutierrez
Journal of Experimental Medicine, 2022, 219 (2), pp.e20211295. ⟨10.1084/jem.20211295⟩
Article dans une revue inserm-03554390v1
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Kinetic proofreading through the multi-step activation of the ZAP70 kinase underlies early T cell ligand discrimination

Guillaume Voisinne , Marie Locard-Paulet , Carine Froment , Emilie Maturin , Marisa Goncalves Menoita
Nature Immunology, 2022, ⟨10.1038/s41590-022-01288-x⟩
Article dans une revue hal-03767648v1
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IL-33 acts as a costimulatory signal to generate alloreactive Th1 cells in graft-versus-host disease

Gaelen Dwyer , Lisa Mathews , José Villegas , Anna Lucas , Anne Gonzalez de Peredo
The Journal of clinical investigation, 2022, 132 (12), pp.e150927. ⟨10.1172/JCI150927⟩
Article dans une revue hal-03766166v1
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Cis interactions between CD2 and its ligands on T cells are required for T cell activation

Bin Li , Yan Lu , Ming-Chao Zhong , Jin Qian , Rui Li
Science Immunology, 2022, 7 (74), ⟨10.1126/sciimmunol.abn6373⟩
Article dans une revue hal-03867882v1
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A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics

Bart van Puyvelde , Simon Daled , Sander Willems , Ralf Gabriels , Anne Gonzalez de Peredo
Scientific Data , 2022, 9 (1), pp.126. ⟨10.1038/s41597-022-01216-6⟩
Article dans une revue hal-03766167v1
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ProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis

Alyssa Imbert , Magali Rompais , Mohammed Selloum , Florence Castelli , Emmanuelle Mouton-Barbosa
Scientific Data , 2021, 8 (1), pp.311. ⟨10.1038/s41597-021-01095-3⟩
Article dans une revue pasteur-03453736v1
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Proline: an efficient and user-friendly software suite for large-scale proteomics

David Bouyssié , Anne-Marie Hesse , Emmanuelle Mouton-Barbosa , Magali Rompais , Charlotte Macron
Bioinformatics, 2020, 36 (10), pp.3148-3155. ⟨10.1093/bioinformatics/btaa118⟩
Article dans une revue hal-02551168v1
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CD5 signalosome coordinates antagonist TCR signals to control the generation of Treg cells induced by foreign antigens

Gaëtan Blaize , Hélène Daniels-Treffandier , Meryem Aloulou , Nelly Rouquié , Cui Yang
Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (23), pp.12969-12979. ⟨10.1073/pnas.1917182117⟩
Article dans une revue hal-03016005v1
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Opposing regulatory functions of the TIM3 (HAVCR2) signalosome in primary effector T cells as revealed by quantitative interactomics

Yunhao Zhai , Javier Celis-Gutierrez , Guillaume Voisinne , Daiki Mori , Laura Girard
Cellular and molecular immunology, inPress, ⟨10.1038/s41423-020-00575-7⟩
Article dans une revue hal-03086942v1
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The T cell CD6 receptor operates a multitask signalosome with opposite functions in T cell activation

Daiki Mori , Claude Gregoire , Guillaume Voisinne , Javier Celis-Gutierrez , Rudy Aussel
Journal of Experimental Medicine, 2020, 218, ⟨10.1084/jem.20201011⟩
Article dans une revue hal-03013448v1
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LymphoAtlas: a dynamic and integrated phosphoproteomic resource of TCR signaling in primary T cells reveals ITSN 2 as a regulator of effector functions

Marie Locard‐paulet , Guillaume Voisinne , Carine Froment , Marisa Goncalves Menoita , Youcef Ounoughene
Molecular Systems Biology, 2020, 16 (7), pp.e9524. ⟨10.15252/msb.20209524⟩
Article dans une revue hal-02981035v1
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Resistance of melanoma to immune checkpoint inhibitors is overcome by targeting the sphingosine kinase-1

Caroline Imbert , Anne Montfort , Marine Fraisse , Elie Marcheteau , Julia Gilhodes
Nature Communications, 2020, 11 (1), pp.437. ⟨10.1038/s41467-019-14218-7⟩
Article dans une revue inserm-02492179v1
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Mass Spectrometry-based Absolute Quantification of 20S Proteasome Status for Controlled Ex-vivo Expansion of Human Adipose-derived Mesenchymal Stromal/Stem Cells

Thomas Menneteau , Bertrand Fabre , Luc Garrigues , Alexandre Stella , Dusan Zivkovic
Molecular and Cellular Proteomics, 2019, 18 (4), pp.744-759. ⟨10.1074/mcp.RA118.000958⟩
Article dans une revue hal-02167451v1

Allosteric Regulation of Cyclin-B Binding by the Charge State of Catalytic Lysine in CDK1 Is Essential for Cell-Cycle Progression

Shaunak Deota , Sivasudhan Rathnachalam , S. Radhika , Krishna Kant Vishwakarma , Tapas Kumar Kundu
Journal of Molecular Biology, 2019, 431 (11), pp.2127-2142. ⟨10.1016/j.jmb.2019.04.005⟩
Article dans une revue hal-02414173v1
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Quantitative interactomics in primary T cells unveils TCR signal diversification extent and dynamics

Guillaume Voisinne , Kristof Kersse , Karima Chaoui , Liaoxun Lu , Julie Chaix
Nature Immunology, 2019, 20 (11), pp.1530 - 1541. ⟨10.1038/s41590-019-0489-8⟩
Article dans une revue hal-03013469v1

Environmental allergens induce allergic inflammation through proteolytic maturation of IL-33

Corinne Cayrol , Anais Duval , Pauline Schmitt , Stéphane Roga , Mylene Camus
Nature Immunology, 2018, 19 (4), pp.375-385. ⟨10.1038/s41590-018-0067-5⟩
Article dans une revue hal-02179492v1

The costimulatory molecule CD226 signals through VAV1 to amplify TCR signals and promote IL-17 production by CD4(+) T cells

Guillaume Gaud , Romain Roncagalli , Karima Chaoui , Isabelle Bernard-Cadenat , Julien Familiades
Science Signaling, 2018, 11 (538), ⟨10.1126/scisignal.aar3083⟩
Article dans une revue hal-02117993v1
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CD5, an Undercover Regulator of TCR Signaling

Guillaume Voisinne , Anne Gonzalez De Peredo , Romain Roncagalli
Frontiers in Immunology, 2018, 9, ⟨10.3389/fimmu.2018.02900⟩
Article dans une revue hal-02089002v1

The costimulatory molecule CD226 signals through VAV1 to amplify TCR signals and promote IL-17 production by CD4 + T cells

Guillaume Gaud , Romain Roncagalli , Karima Chaoui , Isabelle Bernard , Julien Familiades
Science Signaling, 2018, 11 (538), pp.eaar3083. ⟨10.1126/scisignal.aar3083⟩
Article dans une revue inserm-04284289v1

Asb2 alpha-Filamin A Axis Is Essential for Actin Cytoskeleton Remodeling During Heart Development

Arnaud Metais , Isabelle Lamsoul , Armelle Melet , Sandrine Uttenweiler-Joseph , Renaud Poincloux
Circulation Research, 2018, 122 (6), pp.E34+. ⟨10.1161/CIRCRESAHA.117.312015⟩
Article dans une revue hal-02544517v1

Themis2 lowers the threshold for B cell activation during positive selection

Daian Cheng , Mukta Deobagkar-Lele , Ekaterina Zvezdova , Seeyoung Choi , Shoji Uehara
Nature Immunology, 2017, 18 (2), pp.205-213. ⟨10.1038/ni.3642⟩
Article dans une revue hal-03080074v1
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Proteomic Analysis of Regulatory T Cells Reveals the Importance of Themis1 in the Control of Their Suppressive Function.

Fanny Duguet , Marie Locard-Paulet , Marlène Marcellin , Karima Chaoui , Isabelle Bernard-Cadenat
Molecular and Cellular Proteomics, 2017, 16 (8), pp.1416-1432. ⟨10.1074/mcp.M116.062745⟩
Article dans une revue hal-01595559v1

Identification of a Tissue-Restricted Isoform of SIRT1 Defines a Regulatory Domain that Encodes Specificity

Shaunak Deota , Tandrika Chattopadhyay , Deepti Ramachandran , Eric Armstrong , Beatriz Camacho
Cell Reports, 2017, 18 (13), pp.3069-3077. ⟨10.1016/j.celrep.2017.03.012⟩
Article dans une revue hal-03080050v1
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Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics

Mariette I Matondo , Marlène Marcellin , Karima Chaoui , Marie-Pierre Bousquet-Dubouch , Anne Gonzalez-De-Peredo
Proteomics, 2017, Applications and Developments in Targeted Proteomics, 17 (7), pp.1600089. ⟨10.1002/pmic.201600089⟩
Article dans une revue pasteur-02619400v1
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Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update

Yves Vandenbrouck , Lydie Lane , Christine Carapito , Paula Duek , Karine Rondel
Journal of Proteome Research, 2016, 15 (11), pp.3998-4019. ⟨10.1021/acs.jproteome.6b00400⟩
Article dans une revue hal-02191502v1

Ph− myeloproliferative neoplasm red blood cells display deregulation of IQGAP1-Rho GTPase signaling depending on CALR/JAK2 status

Nuria Socoro-Yuste , Marie-Claire Dagher , Anne Gonzalez de Peredo , Julie Mondet , Affif Zaccaria
Biochimica et Biophysica Acta - Molecular Cell Research, 2016, 1863 (11), pp.2758 - 2765. ⟨10.1016/j.bbamcr.2016.08.012⟩
Article dans une revue hal-01400202v1

Themis1 enhances T cell receptor signaling during thymocyte development by promoting Vav1 activity and Grb2 stability

Ekaterina Zvezdova , Judith Mikolajczak , Anne Garreau , Marlène Marcellin , Lise Rigal
Science Signaling, 2016, 9 (428), pp.ra51-ra51. ⟨10.1126/scisignal.aad1576⟩
Article dans une revue hal-03080126v1
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Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods

Claire Ramus , Agnès Hovasse , Marlène Marcellin , Anne-Marie Hesse , Emmanuelle Mouton-Barbosa
Data in Brief, 2016, 6, pp.286-294. ⟨10.1016/j.dib.2015.11.063⟩
Article dans une revue hal-03080142v1
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Clinical implications of recent advances in proteogenomics

Marie Locard-Paulet , Olivier Pible , Anne Gonzalez de Peredo , Béatrice Alpha-Bazin , Christine Almunia
Expert Review of Proteomics, 2016, 13 (2), pp.185-199. ⟨10.1586/14789450.2016.1132169⟩
Article dans une revue hal-03080146v1
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The EuPA Standardization Initiative

F. Canals , F. Elortza , A. Paradela , G. Corthals , Michelle Camenzuli
EuPA Open Proteomics, 2016, 11, pp.31-32. ⟨10.1016/j.euprot.2016.03.007⟩
Article dans une revue hal-03080121v1
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Extracellular IL-33 cytokine, but not endogenous nuclear IL-33, regulates protein expression in endothelial cells

Violette Gautier , Corinne Cayrol , Dorian Farache , Stéphane Roga , Bernard Monsarrat
Scientific Reports, 2016, 6 (1), ⟨10.1038/srep34255⟩
Article dans une revue hal-03080087v1
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Co-recruitment analysis of the CBL and CBLB signalosomes in primary T cells identifies CD5 as a key regulator of TCR-induced ubiquitylation

Guillaume Voisinne , Antonio García-Blesa , Karima Chaoui , Frédéric Fiore , Elise Bergot
Molecular Systems Biology, 2016, 12, pp.876. ⟨10.15252/msb.20166837⟩
Article dans une revue inserm-01368500v1
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Benchmarking quantitative label-free LC–MS data processing workflows using a complex spiked proteomic standard dataset

Claire Ramus , Agnès Hovasse , Marlène Marcellin , Anne-Marie Hesse , Emmanuelle Mouton-Barbosa
Journal of Proteomics, 2016, 132, pp.51-62. ⟨10.1016/j.jprot.2015.11.011⟩
Article dans une revue hal-02083890v1

Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14

Christine Carapito , Lydie Lane , Mohamed Benama , Alisson Opsomer , Emmanuelle Mouton-Barbosa
Journal of Proteome Research, 2015, 14 (9), pp.3621-3634. ⟨10.1021/pr5010345⟩
Article dans une revue hal-02191518v1
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mzDB: A File Format Using Multiple Indexing Strategies for the Efficient Analysis of Large LC-MS/MS and SWATH-MS Data Sets

David Bouyssié , Marc François Pierre Dubois , Sara Nasso , Anne Gonzalez de Peredo , Odile Burlet-Schiltz
Molecular and Cellular Proteomics, 2015, 14 (3), pp.771-781. ⟨10.1074/mcp.o114.039115⟩
Article dans une revue hal-03080211v1

Revisiting the Timing of Action of the PAG Adaptor Using Quantitative Proteomics Analysis of Primary T Cells

K. Reginald , K. Chaoui , R. Roncagalli , M. Beau , M. Goncalves Menoita
Journal of Immunology, 2015, 195 (11), pp.5472-5481. ⟨10.4049/jimmunol.1501300⟩
Article dans une revue hal-03080169v1
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Label-free Quantitative Urinary Proteomics Identifies the Arginase Pathway as a New Player in Congenital Obstructive Nephropathy

Chrystelle Lacroix , Cécile Caubet , Anne Gonzalez-De-Peredo , Benjamin Breuil , David Bouyssié
Molecular and Cellular Proteomics, 2014, 13 (12), pp.3421-3434. ⟨10.1074/mcp.m114.040121⟩
Article dans une revue hal-03080184v1

ELL, a novel TFIIH partner, is involved in transcription restart after DNA repair

S. Mourgues , V. Gautier , A. Lagarou , C. Bordier , A. Mourcet
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (44), pp.17927-17932. ⟨10.1073/pnas.1305009110⟩
Article dans une revue hal-03542278v1
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Label-free Quantification and Shotgun Analysis of Complex Proteomes by One-dimensional SDS-PAGE/NanoLC-MS

Violette Gautier , Emmanuelle Mouton-Barbosa , David Bouyssié , Nicolas Delcourt , Mathilde Beau
Molecular and Cellular Proteomics, 2012, 11 (8), pp.527 - 539. ⟨10.1074/mcp.m111.015230⟩
Article dans une revue hal-03080223v1

IL-33 is processed into mature bioactive forms by neutrophil elastase and cathepsin G

E. Lefrancais , S. Roga , V. Gautier , A. Gonzalez-De-Peredo , B. Monsarrat
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (5), pp.1673-1678. ⟨10.1073/pnas.1115884109⟩
Article dans une revue hal-02998017v1
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Comprehensive human urine standards for comparability and standardization in clinical proteome analysis

Harald Mischak , Walter Kolch , Michalis Aivaliotis , David Bouyssié , Magali Court
PROTEOMICS - Clinical Applications, 2011, 4 (4), pp.464 - 478. ⟨10.1002/prca.200900189⟩
Article dans une revue hal-03080260v1
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In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification.

Emmanuelle Mouton-Barbosa , Florence Roux-Dalvai , David Bouyssié , François R. Berger , Eric Schmidt
Molecular and Cellular Proteomics, 2010, 9 (5), pp.1006-21. ⟨10.1074/mcp.M900513-MCP200⟩
Article dans une revue inserm-00498129v1

The THAP-Zinc Finger Protein THAP1 Associates with Coactivator HCF-1 and O -GlcNAc Transferase

Raoul Mazars , Anne Gonzalez-De-Peredo , Corinne Cayrol , Anne-Claire Lavigne , Jodi Vogel
Journal of Biological Chemistry, 2010, 285 (18), pp.13364-13371. ⟨10.1074/jbc.M109.072579⟩
Article dans une revue hal-03026411v1
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The THAP-Zinc Finger Protein THAP1 Associates with Coactivator HCF-1 andO-GlcNAc Transferase

Raoul Mazars , Anne Gonzalez-De-Peredo , Corinne Cayrol , Anne-Claire Lavigne , Jodi L Vogel
Journal of Biological Chemistry, 2010, 285 (18), pp.13364 - 13371. ⟨10.1074/jbc.m109.072579⟩
Article dans une revue hal-03107809v1
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Lamellar Bodies of Human Epidermis : Proteomics Characterization by High Throughput Mass Spectrometry and Possible Involvement of CLIP-170 in their Trafficking/Secretion

Anne-Aurélie Raymond , Anne Gonzalez de Peredo , Alexandre Stella , Akemi Ishida-Yamamoto , David Bouyssié
Molecular and Cellular Proteomics, 2008, 7 (11), pp.2151-2175. ⟨10.1074/mcp.m700334-mcp200⟩
Article dans une revue hal-03080272v1
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Urine in clinical proteomics.

Stéphane Decramer , Anne Gonzalez de Peredo , Benjamin Breuil , Harald Mischak , Bernard Monsarrat
Molecular and Cellular Proteomics, 2008, 7 (10), pp.1850-62. ⟨10.1074/mcp.R800001-MCP200⟩
Article dans une revue hal-00360866v1
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Extensive Analysis of the Cytoplasmic Proteome of Human Erythrocytes Using the Peptide Ligand Library Technology and Advanced Mass Spectrometry

Florence Roux-Dalvai , Anne Gonzalez de Peredo , Carolina Simó , Luc Guerrier , David Bouyssié
Molecular and Cellular Proteomics, 2008, 7 (11), pp.2254-2269. ⟨10.1074/mcp.m800037-mcp200⟩
Article dans une revue hal-03080269v1

Reversible redox- and zinc-dependent dimerization of the Escherichia coli fur protein.

Benoît d'Autréaux , Ludovic Pecqueur , Anne Gonzalez de Peredo , Rutger E M Diederix , Christelle Caux-Thang
Biochemistry, 2007, 46 (5), pp.1329-42. ⟨10.1021/bi061636r⟩
Article dans une revue hal-00381833v1
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Mascot File Parsing and Quantification (MFPaQ), a New Software to Parse, Validate, and Quantify Proteomics Data Generated by ICAT and SILAC Mass Spectrometric Analyses APPLICATION TO THE PROTEOMICS STUDY OF MEMBRANE PROTEINS FROM PRIMARY HUMAN ENDOTHELIAL CELLS

David Bouyssié , Anne Gonzalez de Peredo , Emmanuelle Mouton , Renaud Albigot , Lucie Roussel
Molecular and Cellular Proteomics, 2007, 6 (9), pp.1621-1637. ⟨10.1074/mcp.t600069-mcp200⟩
Article dans une revue hal-03080279v1
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General Repression of RNA Polymerase III Transcription Is Triggered by Protein Phosphatase Type 2A-Mediated Dephosphorylation of Maf1

Danuta Oficjalska-Pham , Olivier Harismendy , Wieslaw Smagowicz , Anne Gonzalez de Peredo , Magdalena Boguta
Molecular Cell, 2006, 22 (5), pp.623-632. ⟨10.1016/j.molcel.2006.04.008⟩
Article dans une revue hal-03080286v1
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An Optimized Strategy for ICAT Quantification of Membrane Proteins*

Claire Ramus , Anne Gonzalez de Peredo , Cécile Dahout , Maighread Gallagher , Jérôme Garin
Molecular and Cellular Proteomics, 2006, 5 (1), pp.68-78. ⟨10.1074/mcp.m500205-mcp200⟩
Article dans une revue hal-03080295v1
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C-Mannosylation andO-Fucosylation of Thrombospondin Type 1 Repeats

Anne Gonzalez de Peredo , Dominique Klein , Boris Macek , Daniel Hess , Jasna Peter-Katalinic
Molecular and Cellular Proteomics, 2001, 1 (1), pp.11 - 18. ⟨10.1074/mcp.m100011-mcp200⟩
Article dans une revue hal-03080321v1

Conformational changes of the ferric uptake regulation protein upon metal activation and DNA binding; first evidence of structural homologies with the diphtheria toxin repressor.

A. Gonzalez de Peredo , C. Saint-Pierre , J. M. Latour , Isabelle Michaud-Soret , E. Forest
Journal of Molecular Biology, 2001, 310 (1), pp.83-91. ⟨10.1006/jmbi.2001.4769⟩
Article dans une revue hal-01062957v1

Spectroscopic and saturation magnetization properties of the manganese- and cobalt-substituted Fur (ferric uptake regulation) protein from Escherichia coli.

A. Adrait , L. Jacquamet , L. Le Pape , A. Gonzalez de Peredo , D. Aberdam
Biochemistry, 1999, 38 (19), pp.6248-60. ⟨10.1021/bi9823232⟩
Article dans une revue hal-01062964v1

Identification of the two zinc-bound cysteines in the ferric uptake regulation protein from Escherichia coli: chemical modification and mass spectrometry analysis.

A. Gonzalez de Peredo , C. Saint-Pierre , A. Adrait , L. Jacquamet , J. M. Latour
Biochemistry, 1999, 38 (26), pp.8582-9. ⟨10.1021/bi9902283⟩
Article dans une revue hal-01062961v1
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Synthesis and Biological Evaluation of Flavanones and Flavones Related to Podophyllotoxin.

Anne Gonzalez de Peredo , Stephane Leonce , Claude Monneret , Daniel Dauzonne
Chemical and Pharmaceutical Bulletin, 1998, 46 (1), pp.79-83. ⟨10.1248/cpb.46.79⟩
Article dans une revue hal-03080341v1