Annegret Kohler

144
Documents

Présentation

Birth date March 6th 1966, Dudweiler/Saarbruecken Germany

Nationality German

Marital status Married

Department of Tree-Microbes Interactions

Ecogenomics of Interactions Lab

Route d’Amance

INRAE Centre Grand Est-Nancy;

Champenoux, 54280 France

Office phone:+33 383394072

Facsimile: +33 383394069

E-mail: annegret.kohler@inrae.fr

My research is focused on the biology of trees and the associated forest fungi and their role in forest ecosystems. I’m particularly interested in mycorrhizal symbiosis and in characterizing the molecular mechanisms established during development and functioning of this mutualistic interaction, as well as to understand the evolution of symbiotic fungi from saprotrophic ancestors.

I received a PhD in plant physiology and molecular biology at the University of Kaiserslautern/Germany in 1996. During my postdoctoral research I worked on Priming as a mechanism in induced systemic resistance in plants. In 2000 I joined the INRA group, first as a postdoctoral fellow, since 2006 as a permanent staff member. During the last 10 years I was involved in many genomic projects and in particular in charge of the transcriptomic analyses within these projects. I’ve published over 50 scientific papers related to transcriptomics, genomics and tree-microbe interactions

Education and Training:

University of Kaiserslautern (Germany) PhD. Plant Biology1996

University of Edinburgh (UK) DAAD exchange visit 1992

University of Kaiserslautern (Germany) M.S. Plant Biology, Biochemistry,

Genetics and Biotechnology 1991

University of Kaiserslautern (Germany) B.S. Biology1987

Research and Professional Experience:

2006-present Researcher (Ingénieur de recherche) at INRAE Centre Grand Est-Nancy, Tree-Microbes Interaction group (IAM)

Responsible for the IAM technical platform

2000-2006 Postdoctoral Research Associate at INRA Nancy, France

2000 Postdoctoral Research Associate at CNRS-IBMP, Strasbourg, France

1997 – 2000 Postdoctoral Research Associate in Molecular biology of plants, University of Kaiserslautern, Germany

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Publications

Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development

José Eduardo Marqués-Gálvez , Gaurav Pandharikar , Veronica Basso , Annegret Kohler , Nathalie Lackus et al.
New Phytologist, 2024, 242 (2), pp.658-674. ⟨10.1111/nph.19609⟩
Article dans une revue hal-04693914 v1

Sesquiterpenes of the ectomycorrhizal fungus Pisolithus microcarpus alter root growth and promote host colonization

Jonathan Plett , Dominika Wojtalewicz , Krista Plett , Sabrina Collin , Annegret Kohler et al.
Mycorrhiza, 2024, 34 (1-2), pp.69-84. ⟨10.1007/s00572-024-01137-9⟩
Article dans une revue hal-04644888 v1
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Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus

Jonathan M Plett , Shingo Miyauchi , Emmanuelle Morin , Krista Plett , Johanna Wong-Bajracharya et al.
Molecular Biology and Evolution, 2023, 40 (3), pp.msad045. ⟨10.1093/molbev/msad045⟩
Article dans une revue hal-04143140 v1

Ectomycorrhizal symbiosis prepares its host locally and systemically for abiotic cue signaling

Maíra de Freitas Pereira , David Cohen , Lucas Auer , Nathalie Aubry , Marie-Béatrice Bogeat-Triboulot et al.
The Plant Journal, In press, 116 (6), pp.1784-1803. ⟨10.1111/tpj.16465⟩
Article dans une revue hal-04210267 v1

Functional genomics gives new insights into the ectomycorrhizal degradation of chitin

François Maillard , Annegret Kohler , Emmanuelle Morin , Christian Hossann , Shingo Miyauchi et al.
New Phytologist, 2023, 238 (2), pp.845-858. ⟨10.1111/nph.18773⟩
Article dans une revue hal-04219917 v1

DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus

Julien Vigneaud , Annegret Kohler , Mamadou Dia Sow , Alain Delaunay , Laure Fauchery et al.
New Phytologist, 2023, 238 (6), pp.2561-2577. ⟨10.1111/nph.18734⟩
Article dans une revue hal-04050258 v1

Transcriptome and metabolome analysis reveals stage-specific metabolite accumulation during maturity of Chinese black truffle Tuber indicum

Yang Li , Yong-Mei Xing , Claude Murat , Annegret Kohler , Dong-Yu Zhou et al.
Plant Physiology and Biochemistry, 2023, 205, pp.108158. ⟨10.1016/j.plaphy.2023.108158⟩
Article dans une revue hal-04593088 v1
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Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species

Yi-Fei Sun , Annie Lebreton , Jia-Hui Xing , Yu-Xuan Fang , Jing Si et al.
Journal of Fungi, 2022, 8 (3), pp.311. ⟨10.3390/jof8030311⟩
Article dans une revue hal-03627194 v1
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Comparative Transcriptomics Analysis of the Symbiotic Germination of D. officinale (Orchidaceae) With Emphasis on Plant Cell Wall Modification and Cell Wall-Degrading Enzymes

Juan Chen , Yanjing Tang , Annegret Kohler , Annie Lebreton , Yongmei Xing et al.
Frontiers in Plant Science, 2022, 13, pp.880600. ⟨10.3389/fpls.2022.880600⟩
Article dans une revue hal-04001632 v1
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Molecular basis of differential adventitious rooting competence in poplar genotypes

Alok Ranjan , Irene Perrone , Sanaria Alallaq , Rajesh Singh , Adeline Rigal et al.
Journal of Experimental Botany, 2022, 73 (12), pp.4046-4064. ⟨10.1093/jxb/erac126⟩
Article dans une revue (data paper) hal-04220240 v1

Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales

Gang Wu , Shingo Miyauchi , Emmanuelle Morin , Alan Kuo , Elodie Drula et al.
New Phytologist, 2022, 10 (4), ⟨10.1111/nph.17858⟩
Article dans une revue hal-03473169 v1
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Mycorrhiza‐induced mycocypins of Laccaria bicolor are potent protease inhibitors with nematotoxic and collembola antifeedant activity

Jonathan Plett , Jerica Sabotič , Eva Vogt , Fridtjof Snijders , Annegret Kohler et al.
Environmental Microbiology, 2022, 24 (10), pp.4607-4622. ⟨10.1111/1462-2920.16115⟩
Article dans une revue hal-04003303 v1

The ectomycorrhizal basidiomycete Laccaria bicolor releases a GH28 polygalacturonase that plays a key role in symbiosis establishment

Feng Zhang , Aurore Labourel , Mireille Haon , Minna Kemppainen , Emilie da Silva Machado et al.
New Phytologist, 2022, 233 (6), pp.2534-2547. ⟨10.1111/nph.17940⟩
Article dans une revue hal-03583002 v1

Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi

Brian Looney , Shingo Miyauchi , Emmanuelle Morin , Elodie Drula , Pierre Emmanuel Courty et al.
New Phytologist, 2022, 233 (5), pp.2294-2309. ⟨10.1111/nph.17892⟩
Article dans une revue hal-04033326 v1
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Genetic determinants of endophytism in the Arabidopsis root mycobiome

Fantin Mesny , Shingo Miyauchi , Thorsten Thiergart , Brigitte Pickel , Lea Atanasova et al.
Nature Communications, 2021, 12 (1), pp.7227. ⟨10.1038/s41467-021-27479-y⟩
Article dans une revue hal-03508738 v1
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Draft Genome Sequences of the Black Truffles Tuber brumale Vittad. and Tuber indicum Cook & Massee

Emmanuelle Morin , Claude Murat , Nicolas Cichocki , Herminia de La Varga , Annegret Kohler et al.
Microbiology Resource Announcements, 2021, 10 (4), ⟨10.1128/MRA.00799-20⟩
Article dans une revue hal-03324444 v1

Evolution of the Mode of Nutrition in Symbiotic and Saprotrophic Fungi in Forest Ecosystems

Annie Lebreton , Qingchao Zeng , Shingo Miyauchi , Annegret Kohler , Yu-Cheng Dai et al.
Annual Review of Ecology, Evolution, and Systematics, 2021, 52 (1), pp.385-404. ⟨10.1146/annurev-ecolsys-012021-114902⟩
Article dans une revue hal-03606245 v1

Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum

B. Dauphin , Maíra Freitas Pereira , Annegret Kohler , Igor Grigoriev , Kerrie Barry et al.
Environmental Microbiology, 2021, 23 (11), pp.6536-6556. ⟨10.1111/1462-2920.15752⟩
Article dans une revue hal-03610260 v1

Contrasting demographic histories revealed in two invasive populations of the dry rot fungus Serpula lacrymans

Inger Skrede , Jaqueline Hess , Sundy Maurice , Jørn Henrik Sønstebø , Annegret Kohler et al.
Molecular Ecology, 2021, 30 (12), pp.2772-2789. ⟨10.1111/mec.15934​⟩
Article dans une revue hal-03609969 v1
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Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle

José Eduardo Marqués‐gálvez , Shingo Miyauchi , Francesco Paolocci , Alfonso Navarro‐ródenas , Francisco Arenas et al.
New Phytologist, 2021, 229 (5), pp.2917-2932. ⟨10.1111/nph.17044⟩
Article dans une revue hal-03082553 v1
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Diversity of Omega Glutathione Transferases in mushroom-forming fungi revealed by phylogenetic, transcriptomic, biochemical and structural approaches

Thomas Perrot , Mathieu Schwartz , Aurélie Deroy , Jean-Michel Girardet , Annegret Kohler et al.
Fungal Genetics and Biology, 2021, 148, pp.103506. ⟨10.1016/j.fgb.2020.103506⟩
Article dans une revue hal-03143927 v1

Intra‐species genetic variability drives carbon metabolism and symbiotic host interactions in the ectomycorrhizal fungus Pisolithus microcarpus

Krista Plett , Annegret Kohler , Teresa Lebel , Vasanth Singan , Diane Bauer et al.
Environmental Microbiology, 2021, 23 (4), pp.2004-2020. ⟨10.1111/1462-2920.15320⟩
Article dans une revue hal-03250437 v1
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Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus

Salvatore Casarrubia , Elena Martino , Stefania Daghino , Annegret Kohler , Emmanuelle Morin et al.
Frontiers in Microbiology, 2020, 11, pp.341. ⟨10.3389/fmicb.2020.00341⟩
Article dans une revue hal-02905623 v1

An ectomycorrhizal fungus alters sensitivity to jasmonate, salicylate, gibberellin, and ethylene in host roots

Veronica Basso , Annegret Kohler , Shingo Miyauchi , Vasanth Singan , Frédéric Guinet et al.
Plant, Cell and Environment, 2020, 43 (4), pp.1047-1068. ⟨10.1111/pce.13702⟩
Article dans une revue hal-02911824 v1

The mutualism effector MiSSP7 of Laccaria bicolor alters the interactions between the poplar JAZ6 protein and its associated proteins

Yohann Daguerre , Veronica Basso , Sebastian Hartmann-Wittulski , Romain Schellenberger , Laura Meyer et al.
Scientific Reports, 2020, 10 (1), pp.20362. ⟨10.1038/s41598-020-76832-6⟩
Article dans une revue hal-03250408 v1
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Alterations in the phenylpropanoid pathway affect poplar ability for ectomycorrhizal colonisation and susceptibility to root-knot nematodes

Marc Behr , Fabien Baldacci-Cresp , Annegret Kohler , Kris Morreel , Geert Goeminne et al.
Mycorrhiza, 2020, 30 (5), pp.555-566. ⟨10.1007/s00572-020-00976-6⟩
Article dans une revue hal-02948350 v1

The small secreted effector protein MiSSP7.6 of Laccaria bicolor is required for the establishment of ectomycorrhizal symbiosis

Heng Kang , Xin Chen , Minna Kemppainen , Alejandro Pardo , Claire Veneault-Fourrey et al.
Environmental Microbiology, 2020, 22 (4), pp.1435-1446. ⟨10.1111/1462-2920.14959⟩
Article dans une revue hal-02911808 v1
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

Shingo Miyauchi , Enikő Kiss , Alan Kuo , Elodie Drula , Annegret Kohler et al.
Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-18795-w⟩
Article dans une revue hal-03082507 v1

Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers

Florian Barbi , Annegret Kohler , Kerrie Barry , Preetisri Baskaran , Chris Daum et al.
Environmental Microbiology, 2020, 22 (3), pp.1089-1103. ⟨10.1111/1462-2920.14873⟩
Article dans une revue hal-02612520 v1
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Target Of Rapamycin pathway in the white-rot fungus Phanerochaete chrysosporium

Duy Vuong Nguyen , Thomas Roret , Antonio Fernandez-Gonzalez , Annegret Kohler , Melanie Morel-Rouhier et al.
PLoS ONE, 2020, 15 (2), pp.e0224776. ⟨10.1371/journal.pone.0224776⟩
Article dans une revue hal-02797241 v1

Mycorrhizal effector PaMiSSP10b alters polyamine biosynthesis in Eucalyptus root cells and promotes root colonization

Jonathan Plett , Krista Plett , Johanna Wong‐bajracharya , Maíra Freitas Pereira , Maurício Dutra Costa et al.
New Phytologist, 2020, 228 (2), pp.712-727. ⟨10.1111/nph.16759⟩
Article dans une revue hal-02990429 v1
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Molecular Changes Concomitant with Vascular System Development in Mature Galls Induced by Root-Knot Nematodes in the Model Tree Host Populus tremula × P. alba

Fabien Baldacci-Cresp , Marc Behr , Annegret Kohler , Nelly Badalato , Kris Morreel et al.
International Journal of Molecular Sciences, 2020, 21 (2), pp.1-20. ⟨10.3390/ijms21020406⟩
Article dans une revue hal-02913030 v1

Multi-omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring

Hao Tan , Annegret Kohler , Renyun Miao , Tianhai Liu , Qiang Zhang et al.
Environmental Microbiology, 2019, 21 (10), pp.3909-3926. ⟨10.1111/1462-2920.14741⟩
Article dans une revue hal-02311393 v1
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SlZRT2 Encodes a ZIP Family Zn Transporter With Dual Localization in the Ectomycorrhizal Fungus Suillus luteus

Laura Coninx , Nick Smisdom , Annegret Kohler , Natascha Arnauts , Marcel Ameloot et al.
Frontiers in Microbiology, 2019, ⟨10.3389/fmicb.2019.02251⟩
Article dans une revue hal-02901002 v1
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Broad‐specificity GH131 β‐glucanases are a hallmark of Fungi and Oomycetes that colonise plants

Georgios Anasontzis , Marc-Henri Lebrun , Mireille Haon , Charlotte Champion , Annegret Kohler et al.
Environmental Microbiology, 2019, ⟨10.1111/1462-2920.14596⟩
Article dans une revue hal-02111203 v1
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The Hydrophobin-Like OmSSP1 May Be an Effector in the Ericoid Mycorrhizal Symbiosis

Salvatore Casarrubia , Stefania Daghino , Annegret Kohler , Emmanuelle Morin , Hassine-Radhouane Khouja et al.
Frontiers in Plant Science, 2018, 9, pp.1-14. ⟨10.3389/fpls.2018.00546⟩
Article dans une revue hal-01844910 v1
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Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle

Claude Murat-Furminieux , Alan Kuo , Kerrie W Barry , Alicia Clum , Rhyan B Dockter et al.
Genome Announcements, 2018, 6 (25), ⟨10.1128/genomeA.00537-18⟩
Article dans une revue hal-02154520 v1
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Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors

David Lopez , Sébastien Ribeiro , Philippe Label , Boris Fumanal , Jean-Stéphane Venisse et al.
Frontiers in Microbiology, 2018, 9, pp.1-21. ⟨10.3389/fmicb.2018.00276⟩
Article dans une revue hal-01753929 v1
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Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum

Maira de Freitas Pereira , Claire Veneault-Fourrey , Patrice Vion , Frédéric Guinet , Emmanuelle Morin et al.
Frontiers in Microbiology, 2018, 9, pp.1-17. ⟨10.3389/fmicb.2018.00141⟩
Article dans une revue hal-02627372 v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559 v1

Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes

Chiaki Hori , Jill Gaskell , Dan Cullen , Grzegorz Sabat , Philip E Stewart et al.
Applied and Environmental Microbiology, 2018, 84 (20), pp.1-14. ⟨10.1128/AEM.01133-18⟩
Article dans une revue hal-01901472 v1
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Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

Claude Murat , Thibaut Payen , Benjamin Noël , Alan Kuo , Emmanuelle Morin et al.
Nature Ecology & Evolution, 2018, 2 (12), pp.1956-1965. ⟨10.1038/s41559-018-0710-4⟩
Article dans une revue hal-02094494 v1

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

Elena Martino , Emmanuelle Morin , Gwen-Aëlle Grelet , Alan Kuo , Annegret Kohler et al.
New Phytologist, 2018, 217 (3), pp.1213-1229. ⟨10.1111/nph.14974⟩
Article dans une revue hal-02080038 v1

Oak extractive-induced stress reveals the involvement of new enzymes in the early detoxification response of Phanerochaete chrysosporium

Antonio José Fernández-González , Nicolas Valette , Annegret Kohler , Stéphane Dumarçay , Rodnay Sormani et al.
Environmental Microbiology, 2018, 20 (10), pp.3890-3901. ⟨10.1111/1462-2920.14409⟩
Article dans une revue hal-02621597 v1
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The genomic tool-kit of the truffle Tuber melanosporum programmed cell death

Osvaldo Zarivi , Patrizia Cesare , Anna Maria Poma , Sabrina Colafarina , Antonella Bonfigli et al.
Cell Death Discovery, 2018, 4, pp.1-12. ⟨10.1038/s41420-017-0019-0⟩
Article dans une revue hal-02175590 v1
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The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted β-1,4 endoglucanase that plays a key role in symbiosis development

Feng Zhang , George Anasontzis , Aurore Labourel , Charlotte Champion , Mireille Haon et al.
New Phytologist, 2018, 220 (4), pp.1309-1321. ⟨10.1111/nph.15113⟩
Article dans une revue hal-02187791 v1

Photoreceptors in the dark

Raffaele Gerace , Barbara Montanini , Marco Proietto , Elisabetta Levati , Cristina de Luca et al.
Fungal Biology, 2017, 121 (3), pp.253-263. ⟨10.1016/j.funbio.2016.12.003⟩
Article dans une revue hal-01568150 v1
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Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas

Valeria Fochi , Walter Chitarra , Annegret Kohler , Samuele Voyron , Vasanth R Singan et al.
New Phytologist, 2017, 213 (1), pp.365-379. ⟨10.1111/nph.14279⟩
Article dans une revue hal-01493087 v1

iTRAQ and RNA-Seq Analyses Provide New Insights into Regulation Mechanism of Symbiotic Germination of Dendrobium officinale Seeds (Orchidaceae)

Juan Chen , Si Si Liu , Annegret Kohler , Bo Yan , Hong Mei Luo et al.
Journal of Proteome Research, 2017, 16 (6), pp.2174-2187. ⟨10.1021/acs.jproteome.6b00999⟩
Article dans une revue hal-01595729 v1
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Populus trichocarpa encodes small, effector-like secreted proteins that are highly induced during mutualistic symbiosis

Jonathan Michael Plett , Hengfu Yin , Ritesh Mewalal , Rongbin Hu , Ting Li et al.
Scientific Reports, 2017, 7 (1), ⟨10.1038/s41598-017-00400-8⟩
Article dans une revue hal-01568143 v1

Le trufficulteur : Un trait d’union indispensable entre trufficulteurs et scientifiques

Aurélie Deveau , Annegret Kohler , François Le Tacon , Francis Martin , Virginie Molinier et al.
Le Trufficulteur Français, 2017, n°100 spécial, pp.9-10
Article dans une revue (article de synthèse) hal-02620110 v1

Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes

F. Rineau , H. Lmalem , D. Ahren , F. Shah , T. Johansson et al.
Mycorrhiza, 2017, 27 (4), pp.383-396. ⟨10.1007/s00572-016-0758-4⟩
Article dans une revue hal-01597869 v1
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The transcriptional landscape of basidiosporogenesis in mature Pisolithus microcarpus basidiocarp

Maira de Freitas Pereira , André Narvaes da Rocha Campos , Thalita Cardoso Anastacio , Emmanuelle Morin , Sérgio Hermínio Brommonschenkel et al.
BMC Genomics, 2017, 18 (1), ⟨10.1186/s12864-017-3545-5⟩
Article dans une revue hal-01568134 v1

Identification, evolution and functional characterization of two Zn CDF-family transporters of the ectomycorrhizal fungus Suillus luteus

Joske Ruytinx , Laura Coninx , Hoai Nguyen , Nick Smisdom , Emmanuelle Morin et al.
Environmental Microbiology Reports, 2017, 9 (4), pp.419-427. ⟨10.1111/1758-2229.12551⟩
Article dans une revue hal-01573243 v1
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Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor

Yohann Daguerre , E. Levati , Joske Ruytinx , Emilie Tisserant , Emmanuelle Morin et al.
BMC Genomics, 2017, 18 (1), pp.1-23. ⟨10.1186/s12864-017-4114-7⟩
Article dans une revue hal-01611442 v1
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The SlZRT1 Gene Encodes a Plasma Membrane-Located ZIP (Zrt-, Irt-Like Protein) Transporter in the Ectomycorrhizal Fungus Suillus luteus.

Laura Coninx , Anneleen Thoonen , Eli Slenders , Emmanuelle Morin , Natascha Arnauts et al.
Frontiers in Microbiology, 2017, 8, pp.2320. ⟨10.3389/fmicb.2017.02320⟩
Article dans une revue hal-01683176 v1

The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation

Jeanne Dore , Annegret Kohler , Audrey Dubost , Hope Hundley , Vasanth Singan et al.
Environmental Microbiology, 2017, 19 (3), pp.1338 - 1354. ⟨10.1111/1462-2920.13670⟩
Article dans une revue hal-01608622 v1

Transcriptome analysis of the Populus trichocarpa–Rhizophagus irregularis Mycorrhizal Symbiosis

Silvia Calabrese , Annegret Kohler , Annette Niehl , Claire Veneault-Fourrey , Thomas Boller et al.
Plant and Cell Physiology, 2017, 58 (6), pp.1003-1017. ⟨10.1093/pcp/pcx044⟩
Article dans une revue hal-01598827 v1
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Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

Martina Peter , Annegret Kohler , Robin A. Ohm , Alan Kuo , Jennifer Kruetzmann et al.
Nature Communications, 2016, 7, pp.1-15. ⟨10.1038/ncomms12662⟩
Article dans une revue hal-01439098 v1

Unearthing the roots of ectomycorrhizal symbioses

Francis Martin , Annegret Kohler , Claude Murat , Claire Veneault-Fourrey , David S. Hibbett
Nature Reviews Microbiology, 2016, 14 (12), pp.760-773. ⟨10.1038/nrmicro.2016.149⟩
Article dans une revue hal-01579569 v1

Dominant Tree Species and Soil Type Affect the Fungal Community Structure in a Boreal Peatland Forest

Hui Sun , Eeva Terhonen , Andriy Kovalchuk , Hanna Tuovila , Hongxin Chen et al.
Applied and Environmental Microbiology, 2016, 82 (9), pp.2632-2643. ⟨10.1128/AEM.03858-15⟩
Article dans une revue hal-01329219 v1

Genomic resources notes accepted 1 August 2015 - 31 September 2015

. Genomic Resources Development Consortium , Annegret Kohler , Antoine Kremer , Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur et al.
Molecular Ecology Resources, 2016, 16 (1), pp.377-377. ⟨10.1111/1755-0998.12482⟩
Article dans une revue istex hal-02630738 v1
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Diversity and evolution of ABC proteins in mycorrhiza-forming fungi

Andriy Kovalchuk , Annegret Kohler , Francis Martin , Fred O. Asiegbu
BMC Evolutionary Biology, 2015, 15, ⟨10.1186/s12862-015-0526-7⟩
Article dans une revue hal-02641380 v1

Study of nitrogen and carbon transfer from soil organic matter to Tuber melanosporum mycorrhizas and ascocarps using 15N and 13C soil labelling and wholegenome oligoarrays

François Le Tacon , Bernhard Zeller , Caroline Plain , Christian Hossann , Claude Brechet et al.
Plant and Soil, 2015, 395 (1-2), pp.351-373. ⟨10.1007/s11104-015-2557-7⟩
Article dans une revue hal-01269283 v1

The effect of elevated carbon dioxide on the interaction between Eucalyptus grandis and diverse isolates of Pisolithus sp. is associated with a complex shift in the root transcriptome.

Jonathan M. Plett , Annegret Kohler , Amit Khachane , Kerry Keniry , Krista L Plett et al.
New Phytologist, 2015, 206 (4), pp.1423-1436. ⟨10.1111/nph.13103⟩
Article dans une revue hal-01269035 v1

PtaRHE1, a Populus tremula × Populus alba RING-H2 protein of the ATL family, has a regulatory role in secondary phloem fibre development

Fabien Baldacci-Cresp , Jihad Moussawi , Jean-Charles Leplé , Rebecca van den Ackerveken , Annegret Kohler et al.
The Plant Journal, 2015, 82 (6), pp.978-990. ⟨10.1111/tpj.12867⟩
Article dans une revue hal-01167882 v1

Functional guild classification predicts the enzymatic role of fungi in litter and soil biogeochemistry

Jennifer M. Talbot , Francis Martin , Annegret Kohler , Bernard Henrissat , Kabir G. Peay
Soil Biology and Biochemistry, 2015, 88, pp.441-456. ⟨10.1016/j.soilbio.2015.05.006⟩
Article dans une revue hal-01439021 v1

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis

Jeanne Dore , Marie Perraud , Cindy Dieryckx , Annegret Kohler , Emmanuelle Morin et al.
New Phytologist, 2015, 208 (4), pp.1169-1187. ⟨10.1111/nph.13546⟩
Article dans une revue hal-01258333 v1
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Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

Annegret Kohler , Alan Kuo , Laszlo G. Nagy , Emmanuelle Morin , Kerrie W. Barry et al.
Nature Genetics, 2015, 47 (4), pp.410-U176. ⟨10.1038/ng.3223⟩
Article dans une revue hal-02639336 v1

The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses

Jonathan Michael Plett , Emilie Tisserant , Annick Brun-Jacob , Emmanuelle Morin , Igor V. Grigoriev et al.
Molecular Plant-Microbe Interactions, 2015, 28 (3), pp.261-273. ⟨10.1094/MPMI-05-14-0129-FI⟩
Article dans une revue hal-01269457 v1
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Development of the Poplar-Laccaria bicolor Ectomycorrhiza Modifies Root Auxin Metabolism, Signaling, and Response

Alice Vayssieres , Ales Pěnčík , Judith Felten , Annegret Kohler , Karin Ljung et al.
Plant Physiology, 2015, 169 (1), pp.890-902. ⟨10.1104/pp.114.255620⟩
Article dans une revue hal-01591778 v1

Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria-rich microbiome

C. Alisha Quandt , Annegret Kohler , Cedar N. Hesse , Thomas J. Sharpton , Francis Martin et al.
Environmental Microbiology, 2015, 17 (8), pp.2952-2968. ⟨10.1111/1462-2920.12840⟩
Article dans une revue hal-01269421 v1
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Expanding genomics of rnycorrhizal symbiosis

Alan Kuo , Annegret Kohler , Francis M. Martin , Igor V. Grigoriev
Frontiers in Microbiology, 2014, 5, pp.1-7. ⟨10.3389/fmicb.2014.00582⟩
Article dans une revue (article de synthèse) hal-01268943 v1

Ethylene and jasmonic acid act as negative modulators during mutualistic symbiosis between Laccaria bicolor and Populus roots

Jonathan Michael Plett , Amit Khachane , Malika Ouassou , Bjorn Sundberg , Annegret Kohler et al.
New Phytologist, 2014, 202 (1), pp.270-286
Article dans une revue hal-01268693 v1

Effector MiSSP7 of the mutualistic fungus [i]Laccaria[/i] [i]bicolor[/i] stabilizes the [i]Populus[/i] JAZ6 protein and represses jasmonic acid (JA) responsive genes

Jonathan Michael Plett , Yohann Daguerre , Sebastian Wittulsky , Alice Vayssieres , Aurélie Deveau et al.
Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (22), pp.8299-8304. ⟨10.1073/pnas.1322671111⟩
Article dans une revue hal-01268578 v1

Transcriptomic profiles of [i]Heterobasidion annosum[/i] under abiotic stresses and during saprotrophic growth in bark, sapwood and heartwood

Tommaso Raffaello , Hongxin Chen , Annegret Kohler , Fred O. Asiegbu
Environmental Microbiology, 2014, 16 (6), pp.1654-1667. ⟨10.1111/1462-2920.12321⟩
Article dans une revue istex hal-01268770 v1

Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment

Claire Veneault-Fourrey , Carine Commun , Annegret Kohler , Emmanuelle Morin , Raffaella Balestrini et al.
Fungal Genetics and Biology, 2014, 72, pp.168-181. ⟨10.1016/j.fgb.2014.08.007⟩
Article dans une revue hal-01123254 v1
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Transcriptomic responses of phanerochaete chrysosporium to oak acetonic extracts: focus on a new glutathione transferase

Anne Thuillier , Kamel Chibani , Gemma Belli , Enrique Herrero , Stephane Dumarcay et al.
Applied and Environmental Microbiology, 2014, 80 (20), pp.6316-6327. ⟨10.1128/AEM.02103-14⟩
Article dans une revue hal-01268964 v1

Populus trichocarpa and Populus deltoides Exhibit Different Metabolomic Responses to Colonization by the Symbiotic Fungus Laccaria bicolor

Timothy J. Tschaplinski , Jonathan Michael Plett , Nancy L. Engle , Aurélie Deveau , Katherine C. Cushman et al.
Molecular Plant-Microbe Interactions, 2014, 27 (6), pp.546 - 556. ⟨10.1094/MPMI-09-13-0286-R⟩
Article dans une revue hal-01268595 v1

Correction for Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche (vol 109, pg 17501, 2012)

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (10), pp.4146-4146. ⟨10.1073/pnas.1300201110⟩
Article dans une revue hal-01268023 v1

Expression Analysis of the Impact of Culture Filtrates from the Biocontrol Agent, Phlebiopsis gigantea on the Conifer Pathogen, Heterobasidion annosum s.s. Transcriptome

Anthony C. Mgbeahuruike , Annegret Kohler , Frederick O. Asiegbu
Microbial ecology, 2013, 66 (3), pp.669 - 681. ⟨10.1007/s00248-013-0255-7⟩
Article dans une revue istex hal-01268296 v1
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Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes

Stéphane Hacquard , Christine Delaruelle , Pascal Frey , Emilie Tisserant , Annegret Kohler et al.
Frontiers in Plant Science, 2013, 4, ⟨10.3389/fpls.2013.00456⟩
Article dans une revue hal-01268532 v1
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Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus

Aleksandrina Patyshakuliyeva , Edita Jurak , Annegret Kohler , Adam Baker , Evy Battaglia et al.
BMC Genomics, 2013, 14, ⟨10.1186/1471-2164-14-663⟩
Article dans une revue hal-01268453 v1

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

Emilie Tisserant , Mathilde Malbreil , Alan Kuo , Annegret Kohler , Aikaterini Symeonidi et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (50), pp.20117-20122. ⟨10.1073/pnas.1313452110⟩
Article dans une revue hal-01578663 v1

Laser microdissection and microarray analysis of Tuber melanosporum ectomycorrhizas reveal functional heterogeneity between mantle and Hartig net compartments

Stéphane Hacquard , Emilie Tisserant , Annick Brun , Valérie Legué , Francis Martin et al.
Environmental Microbiology, 2013, 15 (6), pp.1853 - 1869. ⟨10.1111/1462-2920.12080⟩
Article dans une revue istex hal-01268103 v1

Self/nonself recognition in Tuber melanosporum is not mediated by a heterokaryon incompatibility system

Mirco Iotti , Andrea Rubini , Emilie Tisserant , Annegret Kohler , Francesco Paolocci et al.
Fungal Biology, 2012, 116 (2), pp.261 - 275. ⟨10.1016/j.funbio.2011.11.009⟩
Article dans une revue istex hal-01268411 v1

Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor

Jonathan Michael Plett , Julien Gibon , Annegret Kohler , Kecia Duffy , Patrik J. Hoegger et al.
Fungal Genetics and Biology, 2012, 49 (3), pp.199 - 209. ⟨10.1016/j.fgb.2012.01.002⟩
Article dans une revue hal-01268401 v1

Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor

Delphine D. Vincent , Annegret Kohler , Stéphane Claverol , Emilie Solier , Johann Joets et al.
Journal of Proteome Research, 2012, 11 (1), pp.157-171. ⟨10.1021/pr200895f⟩
Article dans une revue hal-02646860 v1
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RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

Benjamin Petre , Emmanuelle Morin , Emilie Tisserant , Stéphane Hacquard , Corinne da Silva et al.
PLoS ONE, 2012, 7 (8), pp.1-12. ⟨10.1371/journal.pone.0044408⟩
Article dans une revue hal-01267887 v1

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (43), pp.17501-17506. ⟨10.1073/pnas.1206847109⟩
Article dans une revue hal-01267851 v1
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A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).

Stéphane Hacquard , David L. Joly , Yao-Cheng Lin , Emilie Tisserant , Nicolas Feau et al.
Molecular Plant-Microbe Interactions, 2012, 25 (3), pp.279-293. ⟨10.1094/MPMI-09-11-0238⟩
Article dans une revue hal-01267890 v1

The AINTEGUMENTA LIKE1 Homeotic Transcription Factor PtAIL1 Controls the Formation of Adventitious Root Primordia in Poplar

Adeline A. Rigal , Yordan S. Y. S. Yordanov , Irene I. Perrone , Anna A. Karlberg , Emilie E. Tisserant et al.
Plant Physiology, 2012, 160 (4), pp.1996 - 2006. ⟨10.1104/pp.112.204453⟩
Article dans une revue hal-01004111 v1

The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

Dimitrios Floudas , Manfred Binder , Robert Riley , Kerrie Barry , Robert A. Blanchette et al.
Science, 2012, 336 (6089), pp.1715-1719. ⟨10.1126/science.1221748⟩
Article dans une revue hal-01268324 v1

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen.

Ake Olson , Andrea Aerts , Fred Asiegbu , Lassaâd Belbahri , Ourdia Bouzid et al.
New Phytologist, 2012, 194 (4), pp.1001-1013. ⟨10.1111/j.1469-8137.2012.04128.x⟩
Article dans une revue hal-02649642 v1
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The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont

Emilie Tisserant , Annegret Kohler , Pascale Dozolme , R. Balestrini , K. Benabdellah et al.
New Phytologist, 2012, 196 (3), pp.755-769. ⟨10.1111/j.1469-8137.2011.03948.x⟩
Article dans une revue hal-01267801 v1

Genome-wide analysis of cell wall-related genes in Tuber melanosporum

Raffaella Balestrini , Fabiano Sillo , Annegret Kohler , Georg Schneider , Antonella Faccio et al.
Current Genetics, 2012, 58 (3), pp.165 - 177. ⟨10.1007/s00294-012-0374-6⟩
Article dans une revue hal-01268336 v1

Structure and Expression Profile of the Phosphate Pht1 Transporter Gene Family in Mycorrhizal Populus trichocarpa

Veronica Loth-Pereda , Elena Orsini , Pierre-Emmanuel Courty , Frederic Lota , Annegret Kohler et al.
Annual review of plant physiology, 2011, 156 (4), pp.2141-2154. ⟨10.1104/pp.111.180646⟩
Article dans une revue hal-00825170 v1

Effect of poplar genotypes on mycorrhizal infection and secreted enzyme activities in mycorrhizal and non-mycorrhizal roots

Pierre-Emmanuel Courty , Jessy Labbe , Annegret Kohler , Benoit Marçais , Catherine Bastien et al.
Journal of Experimental Botany, 2011, 62 (1), pp.249-260
Article dans une revue hal-02649491 v1

Genome-wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum

Barbara Montanini , Elisabetta Levati , Angelo Bolchi , Annegret Kohler , Emmanuelle Morin et al.
New Phytologist, 2011, 189 (3), pp.736 - 750. ⟨10.1111/j.1469-8137.2010.03525.x⟩
Article dans une revue hal-02652250 v1

Genome-wide inventory of metal homeostasis-related gene products including a functional phytochelatin synthase in the hypogeous mycorrhizal fungus Tuber melanosporum

Angelo Bolchi , Roberta Ruotolo , Gessica Marchini , Emanuela Vurro , Luigi Sanita Di Toppi et al.
Fungal Genetics and Biology, 2011, 48 (6), pp.573 - 584. ⟨10.1016/j.fgb.2010.11.003⟩
Article dans une revue istex hal-02650565 v1

Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy.

Sébastien Duplessis , Stéphane S. Hacquard , Christine Delaruelle , Emilie Tisserant , Pascal Frey et al.
Molecular Plant-Microbe Interactions, 2011, 24 (7), pp.808-818. ⟨10.1094/MPMI-01-11-0006⟩
Article dans une revue hal-02650884 v1

A secreted effector protein of Laccaria bicolor is required for symbiosis development

Jonathan Michael Plett Plett , Minna Kemppainen , Shiv D. Kale , Annegret Kohler , Valérie Legué et al.
Current Biology, 2011, 21 (14), pp.1197-1203. ⟨10.1016/j.cub.2011.05.033⟩
Article dans une revue hal-02651071 v1

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

Daniel C. Eastwood , Dimitrios Floudas , Manfred Binder , Andrzej Majcherczyk , Patrick Schneider et al.
Science, 2011, 333 (6043), pp.762 - 765. ⟨10.1126/science.1205411⟩
Article dans une revue hal-02647602 v1

Genomic profiling of carbohydrate metabolism in the ectomycorrhizal fungus Tuber melanosporum

P. Ceccaroli , M. Buffalini , R. Saltarelli , E. Barbieri , E. Polidori et al.
New Phytologist, 2011, 189 (3), pp.751 - 764. ⟨10.1111/j.1469-8137.2010.03520.x⟩
Article dans une revue hal-02643838 v1

The Perigord black truffle responds to cold temperature with an extensive reprogramming of its transcriptional activity

Elisa Zampieri , Raffaella Balestrini , Annegret Kohler , Simona Abbà , Francis Martin et al.
Fungal Genetics and Biology, 2011, 48 (6), pp.585 - 591. ⟨10.1016/j.fgb.2010.09.007⟩
Article dans une revue hal-02644923 v1
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Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Sébastien Duplessis , Christina A C. A. Cuomo , Yao-Cheng Y.-C. Lin , Andrea Aerts , Emilie Tisserant et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (22), pp.9166-9171. ⟨10.1073/pnas.1019315108⟩
Article dans une revue hal-01000169 v1

Identification of quantitative trait loci affecting ectomycorrhizal symbiosis in an interspecific F1 poplar cross and differential expression of genes in ectomycorrhizas of the two parents: Populus deltoides and Populus trichocarpa

Jessy Labbé , Véronique V. Jorge , Annegret Kohler , Patrice Vion , Benoit Marçais et al.
Tree Genetics and Genomes, 2011, 7 (3), pp.617-627. ⟨10.1007/s11295-010-0361-3⟩
Article dans une revue istex hal-02652297 v1

Deep RNA sequencing improved the structural annotation of the Tuber melanosporum transcriptome

Emilie Tisserant , C. da Silva , Annegret Kohler , Emmanuelle Morin , Patrick Wincker et al.
New Phytologist, 2011, 189 (3), pp.883-891. ⟨10.1111/j.1469-8137.2010.03597.x⟩
Article dans une revue hal-02645504 v1
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Structure and Expression Profile of the Phosphate Pht1 Transporter Gene Family in Mycorrhizal Populus trichocarpa

Verónica Loth-Pereda , Elena Orsini , Pierre-Emmanuel Courty , Frédéric Lota , Annegret Kohler et al.
Plant Physiology, 2011, 156 (4), pp.2141-2154. ⟨10.1104/pp.111.180646⟩
Article dans une revue hal-02372457 v1

Hyphal and cytoskeleton polarization in Tuber melanosporum: A genomic and cellular analysis

Antonella Amicucci , Raffaella Balestrini , Annegret Kohler , Elena Barbieri , Roberta Saltarelli et al.
Fungal Genetics and Biology, 2011, 48 (6), pp.561 - 572. ⟨10.1016/j.fgb.2010.12.002⟩
Article dans une revue hal-02644924 v1

Laser capture microdissection of uredinia formed by <em>Melampsora larici-populina</em> revealed a transcriptional switch between biotrophy and sporulation

Stéphane S. Hacquard , Christine Delaruelle , Valérie Legué , Emilie Tisserant , Annegret Kohler et al.
Molecular Plant-Microbe Interactions, 2010, 23 (10), pp.1275-1286. ⟨10.1094/MPMI-05-10-0111⟩
Article dans une revue hal-02667759 v1
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Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

Francis Martin , Annegret Kohler , Claude Murat , Raffaella Balestrini , Pedro M Coutinho et al.
Nature, 2010, 464 (7291), pp.1033-1038. ⟨10.1038/nature08867⟩
Article dans une revue cea-00907731 v1

Gene expression analysis of Populus deltoides roots subjected to copper stress

Fernando Guerra , Sébastien Duplessis , Annegret Kohler , Francis Martin , Jaime Tapia et al.
Environmental and Experimental Botany, 2009, 67 (2), pp.335-344. ⟨10.1016/j.envexpbot.2009.08.004⟩
Article dans une revue istex hal-02655593 v1

Phylogenetic analysis, genomic organization, and expression analysis of multi-copper oxidases in the ectomycorrhizal basidiomycete Laccaria bicolor

Pierre-Emmanuel Courty , P.J. Hoegger , S. Kilaru , Annegret Kohler , Marc Buée et al.
New Phytologist, 2009, 182 (3), pp.736-750. ⟨10.1111/j.1469-8137.2009.02774.x⟩
Article dans une revue hal-02667828 v1

The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and arabidopsis through auxin transport and signaling

Judith Felten , Annegret Kohler , Emmanuelle Morin , Rishikesh P. Bhalerao , Klaus Palme et al.
Plant Physiology, 2009, 151 (4), pp.1991-2005. ⟨10.1104/pp.109.147231⟩
Article dans une revue hal-02667577 v1

Fatty acid metabolism in the ectomycorrhizal fungus Laccaria bicolor

Marlis Reich , Cornelia Göbel , Annegret Kohler , Marc Buée , Francis Martin et al.
New Phytologist, 2009, 182 (4), pp.950-964. ⟨10.1111/j.1469-8137.2009.02819.x⟩
Article dans une revue hal-02666947 v1
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Development and validation of an oligonucleotide microarray to characterise ectomycorrhizal fungal communities

Marlis Reich , Annegret Kohler , Francis Martin , Marc Buée
BMC Microbiology, 2009, 9 (241), 11 p. ⟨10.1186/1471-2180-9-241⟩
Article dans une revue hal-02655506 v1

Expansion of signal pathways in the ectomycorrhizal fungus Laccaria bicolor – evolution of nucleotide sequences and expression patterns in families of protein kinases and RAS small GTPases

Balaji Rajashekar , Annegret Kohler , Tomas Johansson , Francis Martin , Anders Tunlid et al.
New Phytologist, 2009, 183 (2), pp.365-379. ⟨10.1111/j.1469-8137.2009.02860.x⟩
Article dans une revue hal-02662077 v1

Genome-wide identification of NBS resistance genes in Populus trichocarpa

Annegret Kohler , Cécile Rinaldi , Sébastien Duplessis , Marie Baucher , Danny Geelen et al.
Plant Molecular Biology, 2008, 66 (6), pp.619-636. ⟨10.1007/s11103-008-9293-9⟩
Article dans une revue istex hal-02669184 v1

A gene repertoire for nitrogen transporters in Laccaria bicolor

Eva Lucic , Claire Veneault-Fourrey , Annegret Kohler , Francis Martin , Michel M. Chalot et al.
New Phytologist, 2008, 180 (2), pp.343-364. ⟨10.1111/j.1469-8137.2008.02580.x⟩
Article dans une revue hal-02659013 v1
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Fungi have three tetraspanin families with distinct functions

Karine Lambou , Didier Tharreau , Annegret Kohler , Catherine Sirven , Melanie Marguerettaz et al.
BMC Genomics, 2008, 9 (63), pp.63. ⟨10.1186/1471-2164-9-63⟩
Article dans une revue hal-02468177 v1
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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

F. Martin , A. Aerts , D. Ahrén , A. Brun , E. G. J. Danchin et al.
Nature, 2008, 452 (7183), pp.88-93. ⟨10.1038/nature06556⟩
Article dans une revue halsde-00261893 v1

The major pathways of carbohydrate metabolism in the ectomycorrhizal basidiomycete Laccaria bicolor S238N

Aurélie Deveau , Annegret Kohler , Pascale P. Frey-Klett , Francis Martin
New Phytologist, 2008, 180 (2), pp.379-390. ⟨10.1111/j.1469-8137.2008.02581.x⟩
Article dans une revue hal-02661726 v1

Gene organization of the mating type regions in the ectomycorrhizal fungus Laccaria bicolor reveals distinct evolution between the two mating type loci

Hélène Niculita-Hirzel , Jessy Labbé , Annegret Kohler , François F. Le Tacon , Francis Martin et al.
New Phytologist, 2008, 180 (2), pp.329-342. ⟨10.1111/j.1469-8137.2008.02525.x⟩
Article dans une revue hal-02663429 v1

Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium

Mélanie Morel , Annegret Kohler , Francis Martin , Éric Gelhaye , Nicolas Rouhier
New Phytologist, 2008, 180 (2), pp.391-407. ⟨10.1111/j.1469-8137.2008.02498.x⟩
Article dans une revue hal-02655538 v1

Living in harmony in the wood underground: ectomycorrhizal genomics

Francis Martin , Annegret Kohler , Sébastien Duplessis
Current Opinion in Plant Biology, 2007, 10 (2), pp.204-210. ⟨10.1016/j.pbi.2007.01.006⟩
Article dans une revue istex hal-02660158 v1

The mycorrhiza helper Pseudomonas fluorescens BBc6R8 has a specific priming effect on the growth, morphology and gene expression of the ectomycorrhizal fungus Laccaria bicolor S238N

Aurélie Deveau , Béatrice Palin , Christine Delaruelle , Magali Peter , Annegret Kohler et al.
New Phytologist, 2007, 175 (4), pp.743-755. ⟨10.1111/j.1469-8137.2007.02148.x⟩
Article dans une revue hal-01195008 v1

Transcript Profiling of Poplar Leaves upon Infection with Compatible and Incompatible Strains of the Foliar Rust Melampsora larici-populina

Cecile Rinaldi , Annegret Kohler , Pascal Frey , Frédéric Duchaussoy , Francois Ningre et al.
Plant Physiology, 2007, 144 (1), pp.347-366. ⟨10.1104/pp.106.094987⟩
Article dans une revue hal-01194961 v1

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

Christophe Plomion , Céline C. Lalanne , Stéphane Claverol , Hakim Meddour , Annegret Kohler et al.
Proteomics, 2006, 6 (24), pp.6509-6527. ⟨10.1002/pmic.200600362⟩
Article dans une revue istex hal-02663888 v1

Gene expression profiling of the nitrogen starvation stress response in the mycorrhizal ascomycete Tuber borchii

Barbara Montanini , Silvia Gabella , Simona Abbà , Martina Peter , Annegret Kohler et al.
Fungal Genetics and Biology, 2006, 43 (9), pp.630-641. ⟨10.1016/j.fgb.2006.04.001⟩
Article dans une revue istex hal-02659650 v1

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)

Gerald A. Tuskan , Stephen Difazio , Stefan Jansson , Jörg Bohlmann , Igor Grigoriev et al.
Science, 2006, 313 (5793), pp.1596-1604. ⟨10.1126/science.1128691⟩
Article dans une revue hal-02669155 v1
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Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis

Mélanie Morel , Christophe Jacob , Annegret Kohler , Thomas Johansson , Francis Martin et al.
Applied and Environmental Microbiology, 2005, 71 (1), pp.382-391. ⟨10.1128/AEM.71.1.382-391.2005⟩
Article dans une revue hal-02679940 v1

Tolérance des peupliers à la sécheresse : peut-on espérer l'améliorer ?

Erwin Dreyer , Marie-Béatrice Bogeat-Triboulot , Didier Le Thiec , Jean-Marc J.-M. Guehl , Franck Brignolas et al.
Biofutur, 2004, 23 (247), pp.54-58
Article dans une revue hal-02674692 v1

Génomique structurale et fonctionnelle du peuplier

F. Martin , Annegret Kohler
Biofutur, 2004, 247, pp.38-42
Article dans une revue hal-02672319 v1

Cloning and expression of multiple metallothioneins from hybrid poplar

Annegret Kohler , D. Blaudez , M. Chalot , F. Martin
New Phytologist, 2004, 164, pp.83-93
Article dans une revue hal-02680733 v1

The poplar root transcriptome: analysis of 7000 expressed sequence tags

Annegret Kohler , Christine Delaruelle , D. Martin , N. Encelot , F. Martin
FEBS Letters, 2003, 542, pp.37-41
Article dans une revue hal-02676991 v1

Analysis of expressed sequence tags from the ectomycorhizal basidiomycetes Laccaria bicolor and Pisolithus microcarpus

Martina Peter , Pierre‐emmanuel Courty , Annegret Kohler , Christine Delaruelle , David Martin et al.
New Phytologist, 2003, 159 (1), pp.117-129. ⟨10.1046/j.1469-8137.2003.00796.x⟩
Article dans une revue hal-02680906 v1

Ectomycorrhizal Symbiosis: From Genomics to Trans-Kingdom Molecular Communication and Signaling

José Eduardo Marqués-Gálvez , Claire Veneault-Fourrey , Annegret Kohler
Microbial Cross-talk in the Rhizosphere, Springer Nature Singapore, pp.273-296, 2022, Rhizosphere Biology, ⟨10.1007/978-981-16-9507-0_11⟩
Chapitre d'ouvrage hal-04208785 v1

Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples

Laure Fauchery , Stéphane Uroz , Marc Buée , Annegret Kohler
Fungal Genomics, 1775 (Chapter 3), Humana Press, New York, NY, 2018, Methods in Molecular Biology, 978-1-4939-7803-8. ⟨10.1007/978-1-4939-7804-5_3⟩
Chapitre d'ouvrage hal-01891732 v1

The evolution of the mycorrhizal lifestyles - a genomic perspective

Annegret Kohler , Francis Martin
Molecular Mycorrhizal Symbiosis, John Wiley & Sons, Inc., pp.87-106, 2016, ⟨10.1002/9781118951446.ch6⟩
Chapitre d'ouvrage hal-02988963 v1

The Mycorrhizal Symbiosis Genomics

Francis M. Martin , Annegret Kohler
Francis Martin. The ecological genomics of fungi, Wiley Blackwell, pp.169-189, 2014, 9781118735893
Chapitre d'ouvrage hal-01950207 v1

Exploring the Transcriptome of Mycorrhizal Interactions

Annegret Kohler , Emilie Tisserant
Fungi, 70, Academic Press - Elsevier, 488 p., 2014, Advances in Botanical Research, 978-0-12-397940-7. ⟨10.1016/B978-0-12-397940-7.00002-1⟩
Chapitre d'ouvrage hal-01268871 v1

De-Constructing a Mutualist: How the Molecular Blueprints of Mode! Symbiotic Fungi Are Changing Our Understanding of Mutualism

Jonathan Michael Plett Plett , Annegret Kohler , Francis Martin
Bertold Hock. The Mycota, IX, Springer, pp.97-117, 2012, Fungal Associations, 978-3-642-30826-0
Chapitre d'ouvrage hal-01950080 v1

Exploring the transcriptome of the ectomycorrhizal symbiosis

Francis Martin , Sébastien Duplessis , Annegret Kohler , Denis Tagu
Molecular genetics and breeding of forest trees, Haworth Press, 2004, 1560229586
Chapitre d'ouvrage hal-02829658 v1