Arnaud Estoup

181
Documents

Publications

Publications

Adaptive Challenges of Past and Future Invasion of Drosophila suzukii : Insights From Novel Genomic Resources and Statistical Methods Combining Individual and Pool Sequencing Data

Louise Camus , Nicolas Rode , Svitlana Serga , Anne Loiseau , Xiao Chen et al.

Molecular Ecology, 2025, 34 (24), pp.e70192. ⟨10.1111/mec.70192⟩

Article dans une revue hal-05534477v1
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Building integrated plant health surveillance: a proactive research agenda for anticipating and mitigating disease and pest emergence

S. Soubeyrand , Arnaud Estoup , Astrid Cruaud , Sylvie Malembic-Maher , Christine Meynard et al.

CABI Agriculture and Bioscience, 2024, 5, pp.72. ⟨10.1186/s43170-024-00273-8⟩

Article dans une revue (article de synthèse) hal-04672656v1
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Rapid and transient evolution of local adaptation to seasonal host fruits in an invasive pest fly

Laure Olazcuaga , Julien Foucaud , Candice Deschamps , Anne Loiseau , Jean-Loup Claret et al.

Evolution Letters, 2022, 6 (6), pp.490-505. ⟨10.1002/evl3.304⟩

Article dans une revue hal-03936160v1
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Macroecological patterns of fruit infestation rates by the invasive fly Drosophila suzukii in the wild reservoir host plant Sambucus nigra

Romain Ulmer , Aude Couty , Patrice Eslin , Manuella Catterou , Lucas Baliteau et al.

Agricultural and Forest Entomology, 2022, 24 (4), pp.548-563. ⟨10.1111/afe.12520⟩

Article dans une revue hal-03714420v1
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ƒ‐statistics estimation and admixture graph construction with Pool‐Seq or allele count data using the R package poolfstat

Mathieu Gautier , Renaud Vitalis , Laurence Flori , Arnaud Estoup

Molecular Ecology Resources, 2022, 22 (4), pp.1394-1416. ⟨10.1111/1755-0998.13557⟩

Article dans une revue hal-03481066v1
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Extending Approximate Bayesian Computation with Supervised Machine Learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest

François‐david Collin , Ghislain Durif , Louis Raynal , Eric Lombaert , Mathieu Gautier et al.

Molecular Ecology Resources, 2021, 21 (8), pp.2598-2613. ⟨10.1111/1755-0998.13413⟩

Article dans une revue hal-03229207v1
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How do invasion syndromes evolve? An experimental evolution approach using the ladybird Harmonia axyridis

Julien Foucaud , Ruth A. Hufbauer , Virginie Ravigné , Laure Olazcuaga , Anne Loiseau et al.

Peer Community Journal, 2021, 1, pp.e33. ⟨10.24072/pcjournal.32⟩

Article dans une revue hal-02564852v2
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Adaptation and correlated fitness responses over two time scales in Drosophila suzukii populations evolving in different environments

Laure Olazcuaga , Julien Foucaud , Mathieu Gautier , Candice Deschamps , Anne Loiseau et al.

Journal of Evolutionary Biology, 2021, 34 (8), pp.1225-1240. ⟨10.1111/jeb.13878⟩

Article dans une revue hal-03261534v3
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The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions

Vincent Mérel , Patricia Gibert , Inessa Buch , Valentina Rodriguez Rada , Arnaud Estoup et al.

Molecular Biology and Evolution, 2021, 38 (10), pp.4252-4267. ⟨10.1093/molbev/msab155⟩

Article dans une revue hal-03417234v1
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A whole-genome scan for association with invasion success in the fruit fly Drosophila suzukii using contrasts of allele frequencies corrected for population structure

Laure Olazcuaga , Anne Loiseau , Hugues Parrinello , Mathilde Paris , Antoine Fraimout et al.

Molecular Biology and Evolution, 2020, 37 (8), pp.2369-2385. ⟨10.1093/molbev/msaa098⟩

Article dans une revue hal-02563272v1
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Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing

Mathilde Paris , Roxane Boyer , Rita Jaenichen , Jochen Wolf , Marianthi Karageorgi et al.

Scientific Reports, 2020, 10 (1), pp.11227. ⟨10.1038/s41598-020-67373-z⟩

Article dans une revue hal-02908174v1
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A young age of subspecific divergence in the desert locust inferred by ABC random forest

Marie-Pierre Chapuis , Louis Raynal , Christophe Plantamp , Christine N. Meynard , Laurence Blondin et al.

Molecular Ecology, 2020, Peer Community in Evolutionary Biology, 29 (23), pp.4542-4558. ⟨10.1111/mec.15663⟩

Article dans une revue hal-02953927v1

Oviposition Preference and Larval Performance of Drosphila suzukii (Diptera: Drosophilidae), Spotted-Wing Drosophila: Effects of Fruit Identity and Composition

Laure Olazcuaga , Nicolas O. Rode , Julien Foucaud , Benoit Facon , Virginie Ravigné et al.

Environmental Entomology, 2019, 48 (4), pp.867-881. ⟨10.1093/ee/nvz062⟩

Article dans une revue hal-02629265v1
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Population management using gene drive: molecular design, models of spread dynamics and assessment of ecological risks

Nicolas O. Rode , Arnaud A Estoup , Denis Bourguet , Virginie Courtier-Orgogozo , Florence Débarre

Conservation Genetics, 2019, 20 (4), pp.671-690. ⟨10.1007/s10592-019-01165-5⟩

Article dans une revue (article de synthèse) hal-02338278v1

Cuticular hydrocarbon composition does not allow Harmonia axyridis males to identify the mating status of sexual partners

Pauline Legrand , Maryse Vanderplanck , Stéphanie Lorge , Philippe Maesen , Georges Lognay et al.

Entomologia Generalis, 2019, 38 (3), pp.211-224. ⟨10.1127/entomologia/2019/0552⟩

Article dans une revue hal-02627681v1

The taste of origin in a lady beetle: do males discriminate between females based on cuticular hydrocarbons?

Pauline Legrand , Maryse Vanderplanck , Istvan Marko , Laurent Gillard , Georges Lognay et al.

Physiological Entomology, 2019, 44 (2), pp.160-168. ⟨10.1111/phen.12286⟩

Article dans une revue hal-02265406v1
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ABC random forests for Bayesian parameter inference

Louis Raynal , Jean-Michel Marin , Pierre Pudlo , Mathieu Ribatet , Christian Robert et al.

Bioinformatics, 2019, 35 (10), pp.1720-1728. ⟨10.1093/bioinformatics/bty867⟩

Article dans une revue hal-01337189v2

Model choice using Approximate Bayesian Computation and Random Forests: analyses based on model grouping to make inferences about the genetic history of Pygmy human populations

Arnaud A Estoup , Louis Raynal , Paul Verdu , Jean-Michel Marin

Journal de la Société Française de Statistique, 2018, 159 (3), pp.167-190

Article dans une revue hal-02618438v1
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The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird

Mathieu Gautier , Junichi Yamaguchi , Julien Foucaud , Anne Loiseau , Aurélien Ausset et al.

Current Biology, 2018, 28 (20), pp.1-7. ⟨10.1016/j.cub.2018.08.023⟩

Article dans une revue hal-01864435v1
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A valuable work lying at the crossroad of neuro-ethology, evolution and ecology in the fruit pest Drosophila suzukii

Arnaud A Estoup , Ruth A Hufbauer

Peer Community In Evolutionary Biology, 2017, ⟨10.24072/pci.evolbiol.100017⟩

Article dans une revue hal-01501559v1

Genetic structure and invasion history of the house mouse (Mus musculus domesticus) in Senegal, West Africa: a legacy of colonial and contemporary times.

Cédric Lippens , A. Estoup , Maman Karmadini Hima , Anne Loiseau , Caroline Tatard et al.

Heredity, 2017, 119 (2), pp.64-75. ⟨10.1038/hdy.2017.18⟩

Article dans une revue hal-01576202v1
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Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest.

Antoine Fraimout , Vincent Debat , Simon Fellous , Ruth A Hufbauer , Julien Foucaud et al.

Molecular Biology and Evolution, 2017, 34 (4), pp.980 - 996. ⟨10.1093/molbev/msx050⟩

Article dans une revue hal-01582586v1
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Mating Status Influences Cold Tolerance and Subsequent Reproduction in the Invasive Ladybird Harmonia axyridis

Benoit Facon , Arnaud A Estoup , Ruth Hufbauer Gillies , Julien Foucaud , Ashraf Tayeh

Frontiers in Ecology and Evolution, 2017, 5, pp.1-5. ⟨10.3389/fevo.2017.00108⟩

Article dans une revue hal-02629316v1

Reduced population size can induce quick evolution of inbreeding depression in the invasive ladybird Harmonia axyridis

Guillaume Laugier , Gilles Le Moguedec , Wang Su , Tayeh Ashraf , Laurent Soldati et al.

Biological Invasions, 2016, 18 (10), pp.2871-2881. ⟨10.1007/s10530-016-1179-1⟩

Article dans une revue hal-01837365v1

Reliable ABC model choice via random forests

Pierre Pudlo , Jean-Michel Marin , Arnaud Estoup , Jean-Marie Cornuet , Mathieu Gautier et al.

Bioinformatics, 2016, 32 (6), pp.859 - 866. ⟨10.1093/bioinformatics/btv684⟩

Article dans une revue hal-01067925v1
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The harlequin ladybird, Harmonia axyridis: global perspectives on invasion history and ecology

Helen E. Roy , Peter M. J. Brown , Tim Adriaens , Nick Berkvens , Isabel Borges et al.

Biological Invasions, 2016, Special section: Drivers, impacts, mechanisms and adaptation in insect invasions, 18 (4), pp.997-1044. ⟨10.1007/s10530-016-1077-6⟩

Article dans une revue (article de synthèse) hal-02062382v1
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Modeling spatial expansion of invasive alien species: relative contributions of environmental and anthropogenic factors to the spreading of the harlequin ladybird in France

Sophie Veran , Sylvain Piry , Vincent Ternois , Christine Meynard , Benoit Facon et al.

Ecography, 2016, 39 (7), pp.665-675. ⟨10.1111/ecog.01389⟩

Article dans une revue istex hal-01604039v1
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Biological invasion and biological control select for different life histories

Ashraf Tayeh , Ruth A. Hufbauer , Arnaud Estoup , Virginie Ravigné , Léa Frachon et al.

Nature Communications, 2015, 6, ⟨10.1038/ncomms8268⟩

Article dans une revue hal-02639655v1

New set of microsatellite markers for the spotted-wing <em>Drosophila suzukii</em> (Diptera: Drosophilidae): a promising molecular tool for inferring the invasion history of this major insect pest

Anne Fraimout , Anne Loiseau , Donald K. Price , Anne Xuéreb , Jean-François Martin et al.

European Journal of Entomology, 2015, 112, pp.855-859

Article dans une revue hal-02631599v1

Evolutionary ecology of microsporidia associated with the invasive ladybird <em>Harmonia axyridis</em>

Andreas Vilcinskas , Henrike Schmidtberg , Arnaud Estoup , Ashraf Tayeh , Benoit Facon et al.

Insect Science, 2015, 22 (3), pp.313 - 324. ⟨10.1111/1744-7917.12159⟩

Article dans une revue hal-02635976v1
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Complementarity of statistical treatments to reconstruct worldwide routes of invasion: the case of the Asian ladybird <em>Harmonia axyridis</em>

Eric Lombaert , Thomas Guillemaud , Jonathan Lundgren , Robert Koch , Benoit Facon et al.

Molecular Ecology, 2014, 23, pp.5979-5997. ⟨10.1111/mec.12989⟩

Article dans une revue istex hal-02635016v1
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Rapid increase in dispersal during range expansion in the invasive ladybird Harmonia axyridis

Eric Lombaert , Arnaud Estoup , Benoit Facon , B. Joubard , J. C. Gregoire et al.

Journal of Evolutionary Biology, 2014, 27 (3), pp.508-517. ⟨10.1111/jeb.12316⟩

Article dans une revue hal-02637907v1

Invasion genetics of a human commensal rodent: the black rat Rattus rattus in Madagascar

Carine Brouat , C. Tollenaere , Arnaud Estoup , Anne Loiseau , S. Sommer et al.

Molecular Ecology, 2014, 23 (16), pp.4153-4167. ⟨10.1111/mec.12848⟩

Article dans une revue istex hal-02636763v1

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data.

Jean-Marie Cornuet , Pierre Pudlo , Julien Veyssier , Alexandre Dehne-Garcia , Mathieu Gautier et al.

Bioinformatics, 2014, 30 (8), pp.1187-1189. ⟨10.1093/bioinformatics/btt763⟩

Article dans une revue hal-01337243v1
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Cannibalism in invasive, native and biocontrol populations of the harlequin ladybird

Ashraf Tayeh , Arnaud Estoup , Eric Lombaert , Thomas Guillemaud , Natalia Kirichenko et al.

BMC Evolutionary Biology, 2014, 14, ⟨10.1186/1471-2148-14-15⟩

Article dans une revue hal-01189948v1

Androgenesis is a maternal trait in the invasive ant Wasmannia auropunctata

Olivier REY , Benoît Facon , Julien Foucaud , Anne Loiseau , Arnaud Estoup

Proceedings of the Royal Society B: Biological Sciences, 2013, 280 (1766), pp.20131181. ⟨10.1098/rspb.2013.1181⟩

Article dans une revue hal-04080705v1

Invasion genetics of the introduced black rat (Rattus rattus) in Senegal, West Africa

Adam Konecny , Arnaud Estoup , Jean-Marc J.-M. Duplantier , Josef Bryja , Khalilou Ba et al.

Molecular Ecology, 2013, 22 (2), pp.286-300. ⟨10.1111/mec.12112⟩

Article dans une revue hal-02648945v1
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Thermotolerance adaptation to human-modified habitats occurs in the native range of the invasive ant <i>Wasmannia auropunctata</i> before long-distance dispersal

Julien Foucaud , Olivier REY , Stéphanie Robert , Laurent Crespin , Jerome Orivel et al.

Evolutionary Applications, 2013, 6 (4), pp.721--34. ⟨10.1111/eva.12058⟩

Article dans une revue hal-02281551v1
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Investigating the genetic load of an emblematic invasive species: the case of the invasive harlequin ladybird Harmonia axyridis

Ashraf Tayeh , Arnaud Estoup , Ruth Hufbauer , Virginie Ravigné , I. Goryacheva et al.

Ecology and Evolution, 2013, 3 (4), pp.864-871. ⟨10.1002/ece3.490⟩

Article dans une revue hal-01259745v1

Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping.

Mathieu Gautier , Julien Foucaud , Karim Gharbi , Timothée Cézard , Maxime Galan et al.

Molecular Ecology, 2013, 22 (14), pp.3766-79. ⟨10.1111/mec.12360⟩

Article dans une revue istex hal-00860608v1
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Increase in Male Reproductive Success and Female Reproductive Investment in Invasive Populations of the Harlequin Ladybird Harmonia axyridis

Guillaume Laugier , Gilles Le Moguedec , Ashraf Tayeh , Anne Loiseau , Naoya Osawa et al.

PLoS ONE, 2013, 8 (10), ⟨10.1371/journal.pone.0077083⟩

Article dans une revue hal-01189772v1

The effect of RAD allele dropout on the estimation of genetic variation within and between populations.

Mathieu Gautier , Karim Gharbi , Timothee Cezard , Julien Foucaud , Carole Kerdelhué et al.

Molecular Ecology, 2013, 22 (11), pp.3165-78. ⟨10.1111/mec.12089⟩

Article dans une revue istex hal-00860611v1
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Distribution of endosymbiotic reproductive manipulators reflects invasion process and not reproductive system polymorphism in the little fire ant Wasmannia auropunctata

Olivier REY , Arnaud Estoup , Benoit Facon , Anne Loiseau , Alexandre Aebi et al.

PLoS ONE, 2013, 8 (3), pp.e58467. ⟨10.1371/journal.pone.0058467⟩

Article dans une revue hal-00850303v1

Estimation of demo-genetic model probabilities with Approximate Bayesian Computation using linear discriminant analysis on summary statistics.

Arnaud Estoup , Eric Lombaert , Jean-Michel Marin , Thomas Guillemaud , Pierre Pudlo et al.

Molecular Ecology Resources, 2012, 12 (5), pp.846-55. ⟨10.1111/j.1755-0998.2012.03153.x⟩

Article dans une revue istex hal-00796906v1
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Anthropogenically induced adaptation to invade (AIAI) : Contemporary adaptation to human-altered habitats within the native range can promote invasions

Ruth Hufbauer , Benoit Facon , Virginie Ravigné , Julie Turgeon , Julien Foucaud et al.

Evolutionary Applications, 2012, 51 (2), pp.89-101. ⟨10.1111/J.1752-4571.2011.00211.X⟩

Article dans une revue hal-01218264v1
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Evolution in biocontrol strains: insight from the harlequin ladybird Harmonia axyridis

Ashraf Tayeh , Arnaud Estoup , Guillaume Laugier , Anne Loiseau , Julie Turgeon et al.

Evolutionary Applications, 2012, 5 (5), pp.481-488. ⟨10.1111/j.1752-4571.2012.00274.x⟩

Article dans une revue hal-01218262v1

Current distribution and population dynamics of the little fire ant supercolony in Cameroon

M. Tindo , P.S. Mbenoun Masse , M. Kenne , R. Mony , Jérôme Orivel et al.

Insectes Sociaux, 2012, 59 (2), pp.175-182. ⟨10.1007/s00040-011-0202-x⟩

Article dans une revue istex hal-02651277v1

Where do adaptive shifts occur during invasion? A multidisciplinary approach to unravelling cold adaptation in a tropical ant species invading the Mediterranean area

Olivier REY , Gael G. Kergoat , Arnaud Estoup , Merav Wonshak , Anne Loiseau et al.

Ecology Letters, 2012, 15 (11), pp.1266-1275. ⟨10.1111/J.1461-0248.2012.01849.X⟩

Article dans une revue hal-02645897v1
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Histoires de rencontres amoureuses

Michel Renou , Denis Thiery , Edith Pajot , Birte Nielsen , Matthieu Keller et al.

INRA Presse Info, 2012, 15 p

Article dans une revue (article de synthèse) hal-01191231v1
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Stratified dispersal and increasing genetic variation during the invasion of central Europe by the western corn rootworm, [i]Diabrotica virgifera virgifera[/i]

Marc Ciosi , N.J. Miller , S. Toepfe , Arnaud Estoup , Thomas Guillemaud

Evolutionary Applications, 2011, 4 (1), pp.54-70. ⟨10.1111/j.1752-4571.2010.00133.x⟩

Article dans une revue hal-01218992v1

The global spread of Harmonia axyridis (Coleoptera: Coccinellidae): distribution, dispersal and routes of invasion

Peter M.J. Brown , Cathleen E. Thomas , Eric Lombaert , Daniel L. Jeffries , Arnaud Estoup et al.

BioControl, 2011, 56 (4), pp.623-641. ⟨10.1007/s10526-011-9379-1⟩

Article dans une revue istex hal-02646957v1
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Inbreeding depression is purged in the invasive insect Harmonia axyridis

Benoit Facon , Ruth A. Hufbauer , Ashraf Tayeh , Anne Loiseau , Eric Lombaert et al.

Current Biology, 2011, 21 (5), pp.424-427. ⟨10.1016/j.cub.2011.01.068⟩

Article dans une revue hal-02644352v1
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Can things get worse when an invasive species hybridizes? The harlequin ladybird Harmonia axyridis in France as a case study

Benoît Facon , Laurent Crespin , Anne Loiseau , Eric Lombaert , Alexandra Magro et al.

Evolutionary Applications, 2011, 4 (1), pp.71-88. ⟨10.1111/j.1752-4571.2010.00134.x⟩

Article dans une revue hal-03304047v1

Ecological genetics of invasive alien species

L.J. Lawson Handley , Arnaud Estoup , D.M. Evans , C.E. Thomas , Eric Lombaert et al.

BioControl, 2011, 56 (4), Special Issue: SI 409-428. ⟨10.1007/s10526-011-9386-2⟩

Article dans une revue hal-02650347v1
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Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird <em>Harmonia axyridis</em>

Eric Lombaert , Thomas Guillemaud , C. E. Thomas , L. J. Lawson Handley , J. Li et al.

Molecular Ecology, 2011, 20 (22), pp.4654 - 4670. ⟨10.1111/j.1365-294X.2011.05322.x⟩

Article dans une revue istex hal-02643512v1

Experimental evidence for the phenotypic impact of admixture between wild and biocontrol Asian ladybird (Harmonia axyridis) involved in the European invasion

Julie Turgeon , Ashraf Tayeh , Benoit Facon , Eric Lombaert , P. de Clercq et al.

Journal of Evolutionary Biology, 2011, 24 (5), pp.1044-1052. ⟨10.1111/j.1420-9101.2011.02234.x⟩

Article dans une revue hal-02647701v1
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Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers

Olivier REY , Anne Loiseau , Benoit Facon , Julien Foucaud , Jérôme Orivel et al.

Molecular Biology and Evolution, 2011, 28 (9), pp.2591-2601. ⟨10.1093/molbev/msr082⟩

Article dans une revue hal-03303975v1
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Biological invasions in agricultural settings: insights from evolutionary biology and population genetics

Thomas Guillemaud , Marc Ciosi , Eric Lombaert , Arnaud Estoup

Comptes Rendus. Biologies, 2011, 334 (3), pp.237-246. ⟨10.1016/j.crvi.2010.12.008⟩

Article dans une revue hal-02646885v1
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Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

Jean-Marie Cornuet , Virginie Ravigné , Arnaud Estoup

BMC Bioinformatics, 2010, 11, pp.401. ⟨10.1186/1471-2105-11-401⟩

Article dans une revue hal-02658867v1

Characterization of polymorphic microsatellite loci in the neotropical plant ant allomerus decemarticulatus (Formicidae: Myrmicinae) and multiplexing with other microsatellites from the ant subfamily Myrmicinae

Pierre-Jean G. Male , Anne Loiseau , Arnaud Estoup , Angélique Quilichini , Jérôme Orivel

European Journal of Entomology, 2010, 107, pp.673-675. ⟨10.14411/eje.2010.074⟩

Article dans une revue hal-01091213v1

In defence of model-based inference in phylogeography.

Mark A Beaumont , Rasmus Nielsen , Christian P. Robert , Jody Hey , Oscar Gaggiotti et al.

Molecular Ecology, 2010, 19 (3), epub ahead of print. ⟨10.1111/j.1365-294X.2009.04515.x⟩

Article dans une revue hal-00450030v1
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Bridgehead effect in the worldwide invasion of the biocontrol Harlequin Ladybird

Eric Lombaert , Thomas Guillemaud , Jean-Marie Cornuet , Thibaut Malausa , Benoit Facon et al.

PLoS ONE, 2010, 5 (3), pp.e9743. ⟨10.1371/journal.pone.0009743⟩

Article dans une revue hal-02664647v1

Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab

J Foucaud , A Estoup , A. Loiseau , Olivier REY , Jérôme Orivel

Heredity, 2010, 105 (2), pp.205-212. ⟨10.1038/hdy.2009.169⟩

Article dans une revue hal-04080683v1

Parental crowding influences life-history traits in Locusta migratoria females

Marie Pierre Chapuis , Lucie Crespin , Arnaud Estoup , Arnaud Augé-Sabatier , A. Foucart et al.

Bulletin of Entomological Research, 2010, 100 (1), pp.9-17. ⟨10.1017/S0007485309006853⟩

Article dans une revue istex hal-02660245v1

In defense of model-based inference in phylogeography

M. Beaumont , R. Nielsen , Cédric Robert Robert , J. Hey , O. Gaggiotti et al.

Molecular Ecology, 2010, 19 (3), pp.436-446. ⟨10.1111/j.1365-294X.2009.04515.x⟩

Article dans une revue hal-00601928v1

Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data

Thomas Guillemaud , M.A. Beaumont , Marc Ciosi , Jean-Marie Cornuet , Arnaud Estoup

Heredity, 2010, 104 (1), pp.88-99. ⟨10.1038/hdy.2009.92⟩

Article dans une revue hal-02659220v1
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Reconstructing the routes of invasion: what for, how and so what

Arnaud Estoup , Thomas Guillemaud

Molecular Ecology, 2010, 19 (19), pp.4113-4130. ⟨10.1111/j.1365-294X.2010.04773.x⟩

Article dans une revue istex hal-02667095v1

Characterization and PCR multiplexing of polymorphic microsatellite loci for the locust Locusta migratoria (vol 5, pg 554, 2005) - corrigendum

Marie Pierre Chapuis , Anne Loiseau , Yannis Michalakis , Michel Lecoq , Arnaud Estoup

Molecular Ecology Resources, 2010, 10 (4), pp.755-755. ⟨10.1111/j.1755-0998.2010.02870.x⟩

Article dans une revue hal-02663744v1

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus

Arnaud Estoup , Stuart Baird , Nicolas Ray , Mathias Currat , Jean-Marie Cornuet et al.

Molecular Ecology Resources, 2010, 10 (5), pp.886-901. ⟨10.1111/j.1755-0998.2010.02882.x⟩

Article dans une revue istex hal-02658739v1
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Worldwide invasion by the little fire ant: routes of introduction and eco-evolutionary pathways

Julien Foucaud , Jérôme Orivel , Anne Loiseau , Jacques H.C. Delabie , Hervé Jourdan et al.

Evolutionary Applications, 2010, 3 (4), pp.363-374. ⟨10.1111/j.1752-4571.2010.00119.x⟩

Article dans une revue hal-00550725v1

IBDSim: a computer program to simulate genotypic data under isolation by distance

Raphaël Leblois , Arnaud Estoup , Francois Rousset

Molecular Ecology Resources, 2009, 9 (1), pp.107 - 109. ⟨10.1111/j.1755-0998.2008.02417.x⟩

Article dans une revue halsde-00359920v1

The interplay between genetic and environmental effects on colony insularity in the clonal invasive little fire ant Wasmannia auropunctata

Merav Vonshak , Tamar Dayan , Julien Foucaud , Arnaud Estoup , Abraham Hefetz

Behavioral Ecology and Sociobiology, 2009, 63 (11), pp.1667-1677. ⟨10.1007/s00265-009-0775-9⟩

Article dans une revue istex hal-02667829v1

Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa.

Paul Verdu , Frédéric Austerlitz , Arnaud Estoup , Renaud Vitalis , Myriam Georges et al.

Current Biology, 2009, 19 (4), pp.312-8. ⟨10.1016/j.cub.2008.12.049⟩

Article dans une revue hal-00397221v1

Retracer l'invasion pour mieux la combattre

Arnaud Estoup , Thomas Guillemaud

Pour la Science. Dossier, 2009, 65, pp.68-70

Article dans une revue hal-02654993v1

Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges

Jérôme Orivel , Julien Grangier , Julien Foucaud , Julien Le Breton , François-Xavier Andrès et al.

Ecological Entomology, 2009, 34 (3), pp.504-512. ⟨10.1111/j.1365-2311.2009.01096.x⟩

Article dans une revue hal-02658746v1

Reproductive system, social organization, human disturbance and ecological dominance in native populations of the little fire ant, Wasmannia auropunctata

Julien Foucaud , Jérôme Orivel , Denis Fournier , Jacques H.C. Delabie , Anne Loiseau et al.

Molecular Ecology, 2009, 18 (24), pp.5059-5073. ⟨10.1111/j.1365-294X.2009.04440.x⟩

Article dans une revue istex hal-02657403v1

Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges.

Jérôme Orivel , Julien Grangier , J. Foucaud , Julien Le Breton , F.X. Andrès et al.

Ecological Entomology, 2009, 34, pp.504-512

Article dans une revue hal-00429336v1

Isolation and characterization of microsatellites in the harlequin ladybird Harmonia axyridis (Coleoptera, Coccinellidae) and cross-species amplification within the family Coccinellidae

Anne Loiseau , Thibaut Malausa , Eric Lombaert , Jean-François Martin , Arnaud Estoup

Molecular Ecology Resources, 2009, 9 (3), pp.934-937. ⟨10.1111/j.1755-0998.2009.02517.x⟩

Article dans une revue istex hal-02657463v1

Outbreaks, gene flow and effective population size in the migratory locust Locusta migratoria: a regional scale comparative survey

Marie Pierre Chapuis , Anne Loiseau , Yannis Michalakis , Michel Lecoq , Alex Franc et al.

Molecular Ecology, 2009, 18 (5), pp.792-800. ⟨10.1111/j.1365-294X.2008.04072.x⟩

Article dans une revue istex hal-02661513v1
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Genetic variation for parental effects on the propensity to gregarise in Locusta migratoria

Marie Pierre Chapuis , Arnaud Estoup , Arnaud Augé-Sabatier , Antoine Foucart , Michel Lecoq et al.

BMC Evolutionary Biology, 2008, 8, pp.37. ⟨10.1186/1471-2148-8-37⟩

Article dans une revue hal-02655314v1

Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface

Gilles Guillot , Filipe Santos , Arnaud Estoup

Bioinformatics, 2008, 24 (11), pp.1406-1407. ⟨10.1093/bioinformatics/btn136⟩

Article dans une revue hal-01197518v1

Spatial genetic structure of a small rodent in a eterogeneous landscape

Bertrand Gauffre , A. Estoup , Vincent Bretagnolle , Jean-François Cosson

Molecular Ecology, 2008, 17 (21), pp.4619-4629. ⟨10.1111/j.1365-294X.2008.03950.x⟩

Article dans une revue istex hal-00339298v1

Infering population history with DIY ABC: a user-friendly approach to Approximate Bayesian Computation.

Jean-Marie Cornuet , Filipe Santos , Marc A. Beaumont , Christian Robert , Jean-Michel Marin et al.

Bioinformatics, 2008, 24 (23), pp.2713-2719. ⟨10.1093/bioinformatics/btn514⟩

Article dans une revue hal-00359624v1

Eight polymorphic microsatellite loci for the Australian plague locust, Chortoicetes terminifera

Marie Pierre Chapuis , Julie-Anne Popple , Stephen J. Simpson , Arnaud Estoup , Jean-François Martin et al.

Molecular Ecology Resources, 2008, 8 (6), pp.1414-1416. ⟨10.1111/j.1755-0998.2008.02204.x⟩

Article dans une revue istex hal-02663921v1

Do outbreaks affect genetic population structure? A worldwide survey in Locusta migratoria, a pest of plagued by microsatellite null alleles

Marie Pierre Chapuis , M. Lecoq , A. Michalakis , Anne Loiseau , A. Sword et al.

Molecular Ecology, 2008, 17 (16), pp.3640-3653. ⟨10.1111/j.1365-294X.2008.03869.x⟩

Article dans une revue hal-02668387v1

Phenotypic variation in invasive and biocontrol populations of the harlequin ladybird, Harmonia axyridis

Eric Lombaert , Thibaut Malausa , Rémi Devred , Arnaud Estoup

BioControl, 2008, 53 (1), pp.89-102. ⟨10.1007/s10526-007-9131-z⟩

Article dans une revue istex hal-02660113v1

Invasion of Europe by the western corn rootworm, Diabrotica virgifera virgifera: multiple transatlantic introductions with various reductions of genetic diversity

Marc Ciosi , J.E. Miller , K.S. Kim , R. Giordano , Arnaud Estoup et al.

Molecular Ecology, 2008, 17 (16), pp.3614-3627. ⟨10.1111/j.1365-294X.2008.03866.x⟩

Article dans une revue hal-02662996v1

Identification of 21 polymorphic microsatellites in the African parasitoid wasp, Psyttalia lounsburyi (Silvestri) (Hymenoptera: Braconidae)

M.C. Bon , J. Jones , C. Hurard , Anne Loiseau , Nicolas Ris et al.

Molecular Ecology Resources, 2008, 8 (4), pp.930-932. ⟨10.1111/j.1755-0998.2008.02120.x⟩

Article dans une revue istex hal-02660934v1
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Microsatellite null alleles and estimation of population differentiation

Marie Pierre Chapuis , Arnaud Estoup

Molecular Biology and Evolution, 2007, 24 (3), pp.621-631. ⟨10.1093/molbev/msl191⟩

Article dans une revue hal-02667983v1

Changes in mating system and social structure of the ant Petalomyrmex phylax are associated with range expansion in Cameroon

Ambroise Dalecky , Gabriel Debout , Arnaud Estoup , Doyle B. Mckey , Finn Kjellberg

Evolution - International Journal of Organic Evolution, 2007, 61 (3), pp.579-595. ⟨10.1111/j.1558-5646.2007.00044.x⟩

Article dans une revue hal-02666531v1

Sex and clonality in the little fire ant.

J. Foucaud , D. Fournier , Jérôme Orivel , J.H.C. Delabie , A. Loiseau et al.

Molecular Biology and Evolution, 2007, 24, pp.2465-2473

Article dans une revue hal-00263425v1

Introduction history of Drosophila subobscura in the New World: a microsatellite based survey using ABC methods

M. Pascual , Marie Pierre Chapuis , F. Mestres , J. Balanya , R.B. Huey et al.

Molecular Ecology, 2007, 16 (15), pp.3069-3083. ⟨10.1111/j.1365-294X.2007.03336.x⟩

Article dans une revue istex hal-02660845v1
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Sex and clonality in the little fire ant

Julien Foucaud , Denis Fournier , Jérôme Orivel , Jacques H.C. Delabie , Anne Loiseau et al.

Molecular Biology and Evolution, 2007, 24 (11), pp.2465-2473. ⟨10.1093/molbev/msm180⟩

Article dans une revue hal-02658375v1

Rare sexual reproduction events in the clonal reproduction system of introduced populations of the little fire ant

Julien Foucaud , Hervé Jourdan , Julien Le Breton , Anne Loiseau , Djoël Konghouleux et al.

Evolution - International Journal of Organic Evolution, 2006, 60 (8), pp.1646-1657. ⟨10.1111/j.0014-3820.2006.tb00509.x⟩

Article dans une revue hal-02662873v1

Habitat contraction and reduction in population size: Does isolation by distance matter?

R. Leblois , A. Estoup , R. Streiff

Mol Ecol, 2006, 15, pp.3601-3615

Article dans une revue hal-00174766v1

Inference on microsatellite mutation processes in the invasive mite, Varroa destructor, using reversible jump Markov Chain Monte Carlo

Jean-Marie Cornuet , M.A. Beaumont , Arnaud Estoup , M. Solignac

Theoretical Population Biology, 2006, 69 (2), pp.129-144. ⟨10.1016/j.tpb.2005.07.005⟩

Article dans une revue istex hal-02668580v1

Genetics of recent habitat contraction and reduction in population size: does isolation by distance matter?

Raphaël Leblois , Arnaud Estoup , Rejane R. Streiff

Molecular Ecology, 2006, 15 (12), pp.3601-3615. ⟨10.1111/j.1365-294X.2006.03046.x⟩

Article dans une revue istex hal-02663496v1
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Absence of genetic divergence between western corn rootworms (Coleoptera : Chrysomelidae) resistant and susceptible to control by crop rotation

Nicholas Miller , Kyung Seok Kim , Susan T. Ratcliffe , Arnaud Estoup , Denis D. Bourguet et al.

Journal of Economic Entomology, 2006, 99 (3), pp.685-690. ⟨10.1093/jee/99.3.685⟩

Article dans une revue hal-02657866v1

Polymorphic microsatellite loci isolated from the Atlanto-Mediterranean colonial ascidian Pycnoclavella sp. (Ascidiacea, Tunicata)

Rocio Pérez-Portela , Sandra Durán , Arnaud Estoup , Xavier Turon

Molecular Ecology Notes, 2006, 6 (2), pp.518-520. ⟨10.1111/j.1471-8286.2006.01304.x⟩

Article dans une revue istex hal-02658258v1

A general eco-evolutionary framework for understanding bioinvasions

Benoit Facon , Benjamin J. Genton , Jacqui Shykoff , Philippe Jarne , Arnaud Estoup et al.

Trends in Ecology & Evolution, 2006, 21 (3), pp.130-135. ⟨10.1016/j.tree.2005.10.012⟩

Article dans une revue istex hal-02667769v1

Bayesian analysis of an admixture model with mutations and arbitrarily linked markers

Laurent Excoffier , Arnaud Estoup , Jean-Marie Cornuet

Genetics, 2005, 169 (3), pp.1727-1738. ⟨10.1534/genetics.104.036236⟩

Article dans une revue hal-02683219v1

Characterization and PCR multiplexing of polymorphic microsatellite loci for the invasive ant Wasmannia auropunctata

Denis Fournier , Julien Foucaud , Anne Loiseau , Sandrine Cros-Arteil , Herve Jourdan et al.

Molecular Ecology Notes, 2005, 5 (2), pp.239-242. ⟨10.1111/j.1471-8286.2005.00889.x⟩

Article dans une revue istex hal-02683070v1

Diabrotica débarqua trois fois (au moins!)

Thomas Guillemaud , Nicholas Miller , Arnaud Estoup , Sylvie Derridj , Laurent Lapchin et al.

Phytoma la Défense des Végétaux, 2005, 588, pp.41-42

Article dans une revue hal-02682073v1

Clonal reproduction by males and females in the little fire ant

Denis Fournier , Arnaud Estoup , Jérôme Orivel , Julien Foucaud , Herve Jourdan et al.

Nature, 2005, 435 (7046), pp.1230-1234. ⟨10.1038/nature03705⟩

Article dans une revue hal-02683434v1

A spatial statistical model for landscape genetics

Gilles Guillot , Arnaud Estoup , Fréderic Mortier , Jean-Francois J.-F. Cosson

Genetics, 2005, 170 (3), pp.1261-1280. ⟨10.1534/genetics.104.033803⟩

Article dans une revue hal-02683491v1

Multiple transatlantic introductions of the western corn rootworm

Nicholas Miller , Arnaud Estoup , Stefan Toepfer , Denis D. Bourguet , Laurent Lapchin et al.

Science, 2005, 310 (5750), pp.992. ⟨10.1126/science.1115871⟩

Article dans une revue hal-02682039v1

Influence of Spatial and Temporal Heterogeneities on the Estimation of Demographic Parameters in a Continuous Population Using Individual Microsatellite Data

Raphaël Leblois , Francois Rousset , Arnaud Estoup

Genetics, 2004, 166 (2), pp.1081-1092. ⟨10.1093/genetics/166.2.1081⟩

Article dans une revue halsde-00326841v1
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Influence of Mutational and Sampling Factors on the Estimation of Demographic Parameters in a "Continuous" Population Under Isolation by Distance

Raphaël Leblois , Arnaud Estoup , Francois Rousset

Molecular Biology and Evolution, 2003, 20 (4), pp.491-502. ⟨10.1093/molbev/msg034⟩

Article dans une revue halsde-00333631v1

Characterization of nine polymorphic microsatellite loci in the fungus Botrytis cinerea (Ascomycota)

Elisabeth Fournier , Tatiana Giraud , Anne Loiseau , Dominique Vautrin , Arnaud A Estoup et al.

Molecular Ecology Notes, 2002, 2 (253-259), pp.253-255. ⟨10.1046/j.1471-8278⟩

Article dans une revue hal-02676802v1

Isolation and characterization of microsatellite loci in the aphid species, Rhopalosiphum padi

Jean-Christophe Simon , Nathalie Leterme , François Delmotte , Olivier Martin , Arnaud Estoup

Molecular Ecology Notes, 2001, 1 (1-2), pp.4-5. ⟨10.1046/j.1471-8278.2000.00002.x⟩

Article dans une revue istex hal-02681394v1

Microsatellite analysis of polyandry and spawning site competition in brown trout (Salmo trutta L.)

C.R. Largiader , Arnaud Estoup , Frédéric Lecerf , Alexis Champigneulle , René R. Guyomard

Genetics Selection Evolution, 2001, 33 (S1), pp.S205-S222

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Absence of evidence for isolation by distance in an expanding cane toad ( Bufo marinus ) population: an individual-based analysis of microsatellite genotypes

Raphaël Leblois , François Rousset , Dani Tikel , Craig Moritz , Arnaud Estoup

Molecular Ecology, 2000, 9 (11), pp.1905-1909. ⟨10.1046/j.1365-294x.2000.01091.x⟩

Article dans une revue istex hal-02929761v1

Polymerase chain reaction primers for polymorphic microsatellite loci in the invasive toad species Bufo marinus

D. Tikel , D. Paetkau , M. Cortinas , Raphaël Leblois , Craig Moritz et al.

Molecular Ecology, 2000, 9 (11), pp.1927-1929. ⟨10.1046/j.1365-294x.2000.01074-6.x⟩

Article dans une revue istex hal-02929768v1

New methods employing multilocus genotypes to select or exclude populations as origins of individuals

J. M. Cornuet , S. Piry , G. Luikart , A. Estoup , M. Solignac

Genetics, 1999, 153, pp.1989-2000

Article dans une revue halsde-00295518v1

Development and cross-species comparison of microsatellite markers in two lizard species, Lacerta vivipara and Podarcis muralis

K. Boudjemadi , Olivier Martin , Jean-Christophe Simon , Arnaud Estoup

Molecular Ecology, 1999, 8, pp.518-520

Article dans une revue hal-02694601v1

Isolation of microsatellite loci in european catfish, Silurus glanis

Francine Krieg , Arnaud Estoup , A. Triantafyllidis , René R. Guyomard

Molecular Ecology, 1999, 8, pp.1957-1969

Article dans une revue hal-02697798v1
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Juxtaposed microsatellite systems as diagnostic markers for admixture : Theoretical aspects

Arnaud Estoup , Jean-Marie Cornuet , François Rousset , René Guyomard

Molecular Biology and Evolution, 1999, 16 (7), pp.898-908. ⟨10.1093/oxfordjournals.molbev.a026179⟩

Article dans une revue hal-02688919v1

Density and variability of dinucleotide microsatellites in the parthenogenetic polyploid snail Melanoides tuberculata

Sarah Samadi , E. Artiguebielle , Arnaud Estoup , J.P. Pointier , J.F. Silvain et al.

Molecular Ecology, 1998, 7, pp.1233-1236

Article dans une revue hal-02697355v1

Variation of microsatellite size homoplasy across electromorphs, loci, and populations in three invertebrate species

Frédérique Viard , Pierre Franck , Marie-Pierre Dubois , Arnaud Estoup , Philippe Jarne

Journal of Molecular Evolution, 1998, 47 (1), pp.42-51. ⟨10.1007/PL00006361⟩

Article dans une revue istex hal-02695581v1

Comparative analysis of microsatellite and allozyme markers: A case study investigating microgeographic differentiation in brown trout (Salmo trutta)

Arnaud Estoup , François Rousset , Y. Michalakis , J.M. Cornuet , M. Adriamanga et al.

Molecular Ecology, 1998, 7, pp.339-353. ⟨10.1046/j.1365-294x.1998.00362.x⟩

Article dans une revue istex hal-02685792v1

The influence of mutation, selection and reproductive systems on microsatellite variability: A simulation approach

Sarah Samadi , François Erard , Arnaud Estoup , P. Jarne

Genetics Research, 1998, 71, pp.213-222

Article dans une revue hal-02697097v1

Parentage assignment using microsatellites in turbot (Scophthalmus maximus) and rainbow trout (Oncorhynchus mykiss) hatchery populations

Arnaud Estoup , Karim Gharbi , M. San Christobal , Claude Chevalet , Pierrick Haffray et al.

Canadian Journal of Fisheries and Aquatic Sciences, 1998, 55, pp.715-725

Article dans une revue hal-02697087v1

Rapid one-tube DNA extraction for reliable PCR dectection of fish polymorphic markers and transgenes.

Arnaud Estoup , C.R. Largiader , E. Perrot , Daniel Chourrout

Molecular Marine Biology and Biotechnology, 1996, 5 (4), pp.295-298

Article dans une revue hal-02697475v1

Genetic differentiation of continental and island populations of Bombus terrestris (Hymenoptera: Apidae) in Europe

Arnaud Estoup , M. Solignac , J.M. Cornuet , Jérome Goudet , A. Schöll

Molecular Ecology, 1996, 5, pp.19-31

Article dans une revue hal-02696674v1

Levels and polyandry and intracolonial genetic relationships in Apis dorsata (Hymenoptera: Apidae)

B.P. Oldroyd , A.J. Smolenski , J.M. Cornuet , S. Wongsiri , Arnaud Estoup et al.

Annals of the Entomological Society of America, 1996, 89 (2), pp.276-283

Article dans une revue hal-02686503v1

Kin recognition in honeybees

Gérard Arnold , Brigitte Quenet , Jean-Marie Cornuet , Claudine Masson , Benoît de Schepper et al.

Nature, 1996, 379 (6565), pp.498. ⟨10.1038/379498a0⟩

Article dans une revue hal-02693854v1

Monoandry and polyandry in bumble bees (Hymenoptera; Bombinae) as evidenced by highly variable microsatellites.

Arnaud Estoup , A. Schöll , A. Pouvreau , M. Solignac

Molecular Ecology, 1995, 4, pp.89-93

Article dans une revue hal-02715569v1

Levels of polyandry and intracolonial genetic relationships in Apis florea

B.P. Oldroyd , A.J. Smolenski , J.M. Cornuet , S. Wongsiri , Arnaud Estoup et al.

Behavioral Ecology and Sociobiology, 1995, 37 (5), pp.329-335. ⟨10.1007/BF00174137⟩

Article dans une revue istex hal-02713140v1

Unusually high frequency of (CT)n and (GT)n microsatellite loci in a yellowjacket wasp, Vespula rufa (L.) ( Hymenoptera : Vespidae).

P.A. Thoren , R.J. Paxton , Arnaud Estoup

Insect Molecular Biology, 1995, 4 (3), pp.141-148

Article dans une revue hal-02709147v1

Size homoplasy and mutational processes of interrupted microsatellites in two bee species, Apis mellifera and Bombus terrestris (Apidae)

Arnaud Estoup , C. Tailliez , J.M. Cornuet , M. Solignac

Molecular Biology and Evolution, 1995, 12 (6), pp.1074-1084

Article dans une revue hal-02700456v1

Microsatellite variation in honey bee (Apis mellifera L.) populations : hierarchical genetic structure and test of the infinite allele and stepwise mutation models

Arnaud Estoup , L. Garnery , M. Solignac , J.M. Cornuet

Genetics, 1995, 140, pp.679-695

Article dans une revue hal-02705216v1
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Colony aggregations in Apis mellifera L

B Oldroyd , A Smolenski , S Lawler , A Estoup , R Crozier

Apidologie, 1995, 26 (2), pp.119-130

Article dans une revue hal-00891252v1

Precise assessment of the number of patrilines and of genetic relatedness in honeybee colonies

Arnaud Estoup , M. Solignac , J.M. Cornuet

Proceedings of the Royal Society B: Biological Sciences, 1994, 258, pp.1-7

Article dans une revue hal-02708180v1
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Diversite et gestion genetique de la truite commune : apport de l'etude du polymorphisme des locus proteiques et microsatellites

P. Presa , Francine Krieg , Arnaud Estoup , René R. Guyomard

Genetics Selection Evolution, 1994, 26 (suppl1), pp.183s-202s

Article dans une revue hal-02714843v1
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Diversité et gestion génétique de la truite commune : apport de l'étude du polymorphisme des locus protéiques et microsatellites

P Presa , Francine Krieg , A Estoup , R Guyomard

Genetics Selection Evolution, 1994, 26 (Suppl1), pp.183s-202s

Article dans une revue hal-00894063v1

Characterization of (GT)n and (CT)n microsatellites in two insect species: Apis mellifera and Bombus terrestris

Arnaud Estoup , M. Solignac , Myriam Harry , J.M. Cornuet

Nucleic Acids Research, 1993, 21 (6), pp.1427-1431

Article dans une revue hal-02707427v1

(CT)n and (GT)n microsatellites : a new class of genetic markers for Salmo trutta L. (brown trout)

Arnaud Estoup , P. Presa , Francine Krieg , Daniel Vaiman , René R. Guyomard

Heredity, 1993, 71, pp.488-496

Article dans une revue hal-02710475v1

Reconstruire les routes d’invasion biologique par des approches de génétique des populations

Arnaud Estoup , Eric Lombaert

Lannou C.; Rasplus J.-Y.; Soubeyrand S.; Gautier M.; Rossi J.-P. Crises sanitaires en agriculture. Les espèces invasives sous surveillance, Editions Quae, pp.39-51, 2023, Savoir faire, 978-2-7592-3482-0

Chapitre d'ouvrage hal-05051102v1

Likelihood-free model choice

Jean-Michel Marin , Pierre Pudlo , Arnaud A Estoup , C.P. Robert

Handbook of Approximate Bayesian Computation, Chapman and Hall, 26 p., 2019, 9781439881507

Chapitre d'ouvrage hal-02787323v1

Application of ABC to Infer the Genetic History of Pygmy Hunter-Gatherer Populations from Western Central Africa

Arnaud A Estoup , Paul Verdu , Jean-Michel Marin , Christian Robert , Alexandre Dehne Garcia et al.

Scott A. Sisson; Yanan Fan; Mark A. Beaumont. Handbook of Approximate Bayesian Computation, Chapman and Hall, Chapter 18, 2019, Chapman & Hall/CRC Handbooks of Modern Statistical Methods, 9781439881507

Chapitre d'ouvrage hal-02787321v1

Is there a genetic paradox of biological invasion?

Arnaud Estoup , Virginie Ravigné , Ruth Hufbauer , Renaud Vitalis , Mathieu Gautier et al.

Annual Review of Ecology, Evolution and Systematics, 47, ANNUAL REVIEWS, pp.22, 2016, Annual Review of Ecology, Evolution, and Systematics, 978-0-8243-1447-7. ⟨10.1146/annurev-ecolsys-121415-032116⟩

Chapitre d'ouvrage hal-01608618v1

Bayesian inference under complex evolutionary scenarios using microsatellite markers: multiple divergence and genetic admixture events in the honey bee, Apis mellifera

Jean-Marie Cornuet , Laurent Excoffier , Pierre Franck , Arnaud Estoup

Genetic Diversity, Nova Science Publishers, 2009, 9781607411765

Chapitre d'ouvrage hal-02821471v1
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Prédiction génomique de l'adaptation de Drosophila suzukii à différentes plantes hôtes

Simon Boitard , Arnaud Estoup , Mathieu Gautier , Nicolas Rode

Journée Intelligence Artificielle et Biodiversité, Labex Cemeb & NUMEV, Mar 2021, Montpellier, France

Communication dans un congrès hal-03649525v1
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Macroecological Patterns of Fruit Infestation Rates by the Invasive Fly Drosophila suzukii in the Reservoir Host Plant Sambucus nigra

Romain Ulmer , Aude Couty , Patrice Eslin , Lucas Baliteau , Anne Bonis et al.

1st International Electronic Conference on Biological Diversity, Ecology and Evolution, Mar 2021, Sciforum.net, France. pp.9469, ⟨10.3390/BDEE2021-09469⟩

Communication dans un congrès hal-03321977v1
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Rapid evolution of local adaptation to different host fruits in wild D. suzukii populations

Laure Olazcuaga , Julien Foucaud , Candice Deschamps , Anne Loiseau , Mathieu Gautier et al.

10th DrosEU Workshop, Instituto Gulbenkian de Ciência, Oeiras, Portugal, Feb 2020, Oeiras, Portugal

Communication dans un congrès hal-02978876v1
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Bringing ABC inference to the machine learning realm : AbcRanger, an optimized random forests library for ABC

François-David Collin , Arnaud Estoup , Jean-Michel Marin , Louis Raynal

JOBIM 2020, Jun 2020, Montpellier, France

Communication dans un congrès hal-02910067v2

Transposable Element Dynamics in an Invasive Species

V. Mérel , Marie Fablet , M. Boulesteix , Arnaud A Estoup , Patricia Gibert et al.

Congrès National des Éléments Transposables (CNET 2018), Jul 2018, Clermont-Ferrand, France

Communication dans un congrès hal-02786547v1

Effect of the environment on life-history traits in Drosophila suzukii

Laure Olazcuaga , Julien Foucaud , Nicolas O. Rode , Benoit Facon , Virginie Ravigné et al.

International Conference on Ecological Sciences (Sfécologie 2018), Oct 2018, Rennes, France. 825 p

Communication dans un congrès hal-02735719v1

Apport de la technologie Oxford NanoPore pour l’assemblage de novo du génome d’espèces non-modèles : le cas de la coccinelle asiatique Harmonia axyridis

Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno et al.

Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2018), Société Française de Bio-Informatique (SFBI). FRA. GdR 3003 Bioinformatique Moléculaire (GdR BiM), FRA. Institut Français de Bioinformatique (IFB), FRA. Aix Marseille Université (AMU), FRA. Institut National de la Santé et de la Recherche Médicale (INSERM), FRA. Centre National de la Recherche Scientifique (CNRS), FRA., Jul 2018, Marseille, France

Communication dans un congrès hal-02733723v1

Can evolutionary biology help better predict the risks associated with population control using gene drives?

Nicolas O. Rode , Arnaud A Estoup , Denis Bourguet , V. Courtier-Orgogozo , Florence Débarre

2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France

Communication dans un congrès hal-02785305v1

Apport de la technologie Oxford NanoPore pour l’assemblage de novo du génome d’espèces non-modèles : le cas de la coccinelle asiatique Harmonia axyridis

Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno et al.

Montpellier Omics days 2018, Université de Montpellier (UM). Montpellier, FRA., Feb 2018, Montpellier, France

Communication dans un congrès hal-02737315v1

Contribution of Oxford NanoPore technology for the de novo genome assembly of nonmodel species: the case of the Asian ladybird Harmonia axyridis

Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno et al.

Réunion France Génomique, Nov 2018, Evry, France

Communication dans un congrès hal-02785309v1

Oviposition preference and larva performance in natural populations of Drosophila suzukii

Laure Olazcuaga , Ruth Hufbauer , Julien Foucaud , Benoit Facon , Aurélien Ausset et al.

Annual Meeting of D. suzukii's managment, Centre Technique Interprofessionnel des Fruits et Légumes (CTIFL). FRA., Jun 2017, Bellegarde, France

Communication dans un congrès hal-02789374v1

The evolutionary ecology of invasive pests

Ruth Hufbauer , Arnaud A Estoup , Laure Olazcuaga , Julien Foucaud

CeMEB Scientific Days, Apr 2017, Montpellier, France

Communication dans un congrès hal-02787292v1

Rôle de l’évolution dans la proliferation des espèces

Arnaud A Estoup , Ruth Hufbauer

Séance de l’Académie d’agriculture de France sur les pullulations d’espèces exotiques ou autochtones. Section 6 « Sciences de la vie », Académie d'Agriculture de France (AAF). Paris, FRA., Mar 2017, Paris, France

Communication dans un congrès hal-02787251v1

Approximate Bayesian Computation using Random Forest

Jean-Michel Marin , Pierre Pudlo , Louis Raynal , Arnaud A Estoup , Christian P. Robert

Validating and Expanding Approximate Bayesian Computation Methods (17w5025), Banff International Research Station for Mathematical Innovation and Discovery (BIRS). MEX., Feb 2017, Banff, Canada

Communication dans un congrès hal-02786888v1

Reconstruction des routes d’invasion: nouvelles méthodes génétiques et statistiques appliquées à Drosophila suzukii

Arnaud A Estoup

Journées Nationales Drosophila Suzukii, Centre Technique Interprofessionnel des Fruits et Légumes (CTIFL). Bellegarde, FRA., Dec 2016, Bellegarde, France

Communication dans un congrès hal-02794748v1

Reconstructing the routes of invasion of Drosophila suzukii by means of ABC random forest

Arnaud A Estoup

Réunion du réseau sur la durabilité des méthodes de lutte agro-écologique contre les mouches des fruits, Agropolis Fondation. Montpellier, FRA., Sep 2016, Montpellier, France

Communication dans un congrès hal-02794751v1

Invasion genetics of the ladybird Harmonia axyridis

Arnaud A Estoup

Chinese Academy of Sciences, Chinese Academy of Sciences (CAS). Beijing, CHN., Nov 2015, Beijing, China

Communication dans un congrès hal-02797979v1

Invasion biology: insights from evolutionary biology and population genetics

Thomas Guillemaud , Eric Lombaert , Arnaud A Estoup

25. IWGO meeting, Apr 2014, Chicago, United States

Communication dans un congrès hal-02794753v1

Changements évolutifs et bioinvasions

Guillaume Laugier , Arnaud Estoup , Gilles Le Moguedec , Benoit Facon

34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France. 1 p

Communication dans un congrès hal-02745637v1

Consequences of hybridization between invasive and biocontrol individuals of the harlequin ladybird Harmonia axyridis in France

Benoit Facon , Laurent Crespin , Anne Loiseau , Eric Lombaert , Alexandra Magro et al.

Meeting IOBC / WPRS “Harmonia axyridis and other ladybirds”, Sep 2009, Engelberg, Switzerland

Communication dans un congrès hal-01231284v1

Génétique des colonies et des populations de Wasmannia auropunctata

Arnaud Estoup

2. Colloque de restitution du programme de recherche, Nov 2006, Paris, France

Communication dans un congrès hal-02758073v1

Inférence bayésienne dans des scénarios évolutifs complexes avec populations mélangées: application à l’abeille domestique

Jean-Marie Cornuet , Laurent Excoffier , Pierre Franck , Arnaud Estoup

6. colloque national du BRG, Oct 2006, La Rochelle, France

Communication dans un congrès hal-02755949v1

Ecologie et génétique évolutive d’une fourmi envahissante Wasmannia auropunctata

Arnaud Estoup

2. Colloque de restitution du programme de recherche, Nov 2006, Paris, France

Communication dans un congrès hal-02756220v1

Inference of demographic parameters under isolation by distance: what can we do now

Raphaël Leblois , Maria de Iorio , Robert Griffiths , Arnaud Estoup , François Rousset

2nd International Congress on DNA Polymorphisms in Human Populations, Dec 2003, Paris, France

Communication dans un congrès hal-02932438v1
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Diversite et gestion genetique de la truite commune : apport de l'etude du polymorphisme des locus proteiques et microsatellites

P. Presa , Francine Krieg , Arnaud Estoup , René R. Guyomard

Colloque BRG/INRA. Ressources génétiques animales et végétales. Méthodologies d'étude et de gestion, Sep 1993, Montpellier, France

Communication dans un congrès hal-02850884v1