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Aurélie Siberchicot

Software ingeneer
21
Documents
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Publications

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DRomics, a workflow to exploit dose-response omics data in ecotoxicology

Marie Laure Delignette-Muller , Aurélie Siberchicot , Floriane Larras , Elise Billoir
Peer Community Journal, 2023, 3, pp.e90. ⟨10.24072/pcjournal.325⟩
Journal articles hal-04231043v1
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PhylteR: Efficient Identification of Outlier Sequences in Phylogenomic Datasets

Aurore Comte , Théo Tricou , Eric Tannier , Julien Joseph , Aurélie Siberchicot
Molecular Biology and Evolution, 2023, 40 (11), pp.msad234. ⟨10.1093/molbev/msad234⟩
Journal articles hal-03995366v3
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Taking full advantage of modelling to better assess environmental risk due to xenobiotics

Sandrine Charles , Aude Ratier , Virgile Baudrot , Gauthier Multari , Aurélie Siberchicot
Environmental Science and Pollution Research, In press, ⟨10.1007/s11356-021-15042-7⟩
Journal articles hal-03362566v1
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rbioacc: An R-package to analyze toxicokinetic data

Aude Ratier , Virgile Baudrot , Miléna Kaag , Aurélie Siberchicot , Christelle Lopes
Ecotoxicology and Environmental Safety, 2022, 242, pp.113875. ⟨10.1016/j.ecoenv.2022.113875⟩
Journal articles ineris-03846876v1

Lifespan decreases with proportion of sons in males but not females of zoo‐housed tigers and lemurs

Morgane Tidière , Guillaume Douay , Peter Müller , Aurélie Siberchicot , Alexander Sliwa
Journal of Evolutionary Biology, 2021, ⟨10.1111/jeb.13793⟩
Journal articles hal-03228336v1

Sex‐specific actuarial and reproductive senescence in zoo‐housed tiger ( Panthera tigris ): The importance of sub‐species for conservation

Morgane Tidière , Peter Müller , Alexander Sliwa , Aurélie Siberchicot , Guillaume Douay
Zoo Biology, 2021, ⟨10.1002/zoo.21610⟩
Journal articles hal-03225426v1

Pollen limitation as a main driver of fruiting dynamics in oak populations

Marie-Claude Bel-Venner , David Fouchet , Aurélie Siberchicot , Vincent Boulanger , Thomas Caignard
Ecology Letters, 2019, 22 (1), pp.98-107. ⟨10.1111/ele.13171⟩
Journal articles hal-02309939v1

Maternal reproductive senescence shapes the fitness consequences of the parental age difference in ruffed lemurs

Morgane Tidière , Xavier Thevenot , Adamantia Deligiannopoulou , Guillaume Douay , Mylisa Whipple
Proceedings of the Royal Society B: Biological Sciences, 2018, 285 (1886), pp.20181479. ⟨10.1098/rspb.2018.1479⟩
Journal articles hal-02309944v1
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DRomics: A Turnkey Tool to Support the Use of the Dose–Response Framework for Omics Data in Ecological Risk Assessment

Floriane Larras , Elise Billoir , Vincent Baillard , Aurélie Siberchicot , Stefan Scholz
Environmental Science and Technology, 2018, 52 (24), pp.14461-14468. ⟨10.1021/acs.est.8b04752⟩
Journal articles hal-02309919v1
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MareyMap online: A user-friendly web application and database service for estimating recombination rates using physical and genetic maps

Aurélie Siberchicot , Adrien Bessy , Laurent Gueguen , Gabriel A. B. Marais
Genome Biology and Evolution, 2017, 9 (10), pp.2506-2509. ⟨10.1093/gbe/evx178⟩
Journal articles hal-02624713v1

adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data

Aurélie Siberchicot , A. Julien-Laferrière , Ab. Dufour , J. Thioulouse , S. Dray
The R Journal, 2017, 9 (2), pp.198-212. ⟨10.32614/RJ-2017-042⟩
Journal articles hal-01887857v1

Fruiting Strategies of Perennial Plants: A Resource Budget Model to Couple Mast Seeding to Pollination Efficiency and Resource Allocation Strategies

Samuel Venner , A. Siberchicot , P.F. Pélisson , E. Schermer , Marie-Claude Bel-Venner
The American Naturalist, 2016, 188 (1), pp.66-75. ⟨10.1086/686684⟩
Journal articles hal-02049895v1

Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Eléonore Hellard , Dominique Pontier , Aurélie Siberchicot , Frank Sauvage , David Fouchet
Epidemics, 2015, 11, pp.48-55. ⟨10.1016/j.epidem.2015.02.004⟩
Journal articles hal-01157786v1
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Determining the instar of a weevil larva (Coleoptera: Curculionidae) using a parsimonious method

A. Merville , A. Vallier , Samuel Venner , A. Siberchicot , D. Fouchet
European Journal of Entomology, 2014, 111 (4), pp.567-573. ⟨10.14411/eje.2014.056⟩
Journal articles hal-01449145v1

Conference Report: Deuxièmes Rencontres R

Aurélie Siberchicot , S. Dray
The R Journal, 2013, 5/2, pp.164--165
Journal articles hal-01887870v1

Novel measures of linkage disequilibrium that correct the bias due to population structure and relatedness

Brigitte Mangin , Aurélie Siberchicot , S. Nicolas , Agnes Doligez , Patrice This
Heredity, 2012, 108 (3), pp.285-291. ⟨10.1038/hdy.2011.73⟩
Journal articles hal-01267769v1

Genetic structure and linkage disequilibrium in 4 Vitis species

Patrice This , Stephane Nicolas , Jean-Pierre Peros , Thierry Lacombe , Loic Le Cunff
Plant and Animal Genomes Conference, Jan 2011, San Diego, California, United States
Conference papers hal-01506173v1

Genetic structure and linkage disequilibrium in four Vitis species

Stephane Nicolas , Jean-Pierre Peros , Patrice P. This , Thierry Lacombe , L. Le Cunff
10. International Conference on Grapevine Breeding and Genetics, Aug 2010, Geneva (N.Y.), United States
Conference papers hal-02756085v1