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Benjamin Brachi

28
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Publications

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Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie et al.
Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩
Journal articles hal-03771214v1
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Plant genetic effects on microbial hubs impact host fitness in repeated field trials

Benjamin Brachi , Daniele Filiault , Hannah Whitehurst , Paul Darme , Pierre Le Gars et al.
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (30), pp.1-12. ⟨10.1073/pnas.2201285119/-/DCSupplemental⟩
Journal articles hal-03778825v1

Assessing the potential to harness the microbiome through plant genetics

Joy Bergelson , Benjamin Brachi , Fabrice Roux , Fabienne Vailleau
Current Opinion in Biotechnology, 2021, 70, pp.167-173. ⟨10.1016/j.copbio.2021.05.007⟩
Journal articles hal-03282418v1

Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions

Kathleen Beilsmith , Manus P.M. Thoen , Benjamin Brachi , Andrew D. Gloss , Mohammad H. Khan et al.
Plant Journal, 2019, 97 (1), pp.164-181. ⟨10.1111/tpj.14170⟩
Journal articles hal-02626936v1

The genetics of exapted resistance to two exotic pathogens in pedunculate oak

Jérôme Bartholome , Benjamin Brachi , Benoit Marçais , Amira Mougou , Catherine Bodenes et al.
New Phytologist, 2019, online first, pp.1-16. ⟨10.1111/nph.16319⟩
Journal articles hal-02619694v1

Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth

Thomas Damestoy , Benjamin Brachi , Xoaquín Moreira , Herve Jactel , Christophe Plomion et al.
Tree Physiology, 2019, 39 (4), pp.615-627. ⟨10.1093/treephys/tpy149⟩
Journal articles hal-02617788v1
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Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot

Jia-Hui Chen , Yuan Huang , Benjamin Brachi , Quan-Zheng Yun , Wei Zhang et al.
Nature Communications, 2019, 10 (1), pp.1-12. ⟨10.1038/s41467-019-13128-y⟩
Journal articles hal-02619675v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Journal articles hal-01820559v1

Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies

Fabienne van Rossum , Hélène Martin , Solenn Le Cadre , Benjamin Brachi , Maarten J.M. Christenhusz et al.
Perspectives in Plant Ecology, Evolution and Systematics, 2018, 35, pp.44-51. ⟨10.1016/j.ppees.2018.10.003⟩
Journal articles hal-02621000v1
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The rate and potential relevance of new mutations in a colonizing plant lineage

Moises Exposito-Alonso , Claude Becker , Verena J. Schuenemann , Ella Reiter , Claudia Setzer et al.
PLoS Genetics, 2018, 14 (2), pp.1-21. ⟨10.1371/journal.pgen.1007155⟩
Journal articles hal-02625418v1

Genetic variants affecting plant size and chemical defenses jointly shape herbivory in Arabidopsis

Andrew D Gloss , Benjamin Brachi , Mitchell J Feldmann , Simon C Groen , Claudia Bartoli Kautsky et al.
BioRxiv, 2017, ⟨10.1101/156299⟩
Journal articles hal-02947607v1
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Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana

Benjamin Brachi , Christopher G Meyer , Romain Villoutreix , Alexander Platt , Timothy C Morton et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (13), pp.4032-4037. ⟨10.1073/pnas.1421416112⟩
Journal articles hal-01134027v1

Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana

Benjamin Brachi , R. Villoutreix , N. Faure , Hautekèete N.-C. , Y. Piquot et al.
Molecular Ecology, 2013, 22 (16), pp.4222-4240. ⟨10.1111/mec.12396⟩
Journal articles hal-00860399v1

Genome-wide association mapping of flowering time in Arabidopsis thaliana in nature: genetics for underlying components and reaction norms across two successive years.

Benjamin Brachi , N. Faure , J. Bergelson , J. Cuguen , F. Roux et al.
Acta Botanica Gallica, 2013, 160 (3-4), pp.205-219. ⟨10.1080/12538078.2013.807302⟩
Journal articles hal-01110775v1
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Adaptive Value of Phenological Traits in Stressful Environments: Predictions Based on Seed Production and Laboratory Natural Selection

Benjamin Brachi , Carla Aimé , Cédric Glorieux , Joël Cuguen , Fabrice Roux et al.
PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩
Journal articles hal-03114034v1
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Adaptive value of phenological traits in stressful environments: predictions based on seed production and laboratory natural selection

Benjamin Brachi , Carole Aimé , C. Glorieux , J. Cuguen , F. Roux et al.
PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩
Journal articles hal-00685041v1
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Genome-wide association studies in plants: the missing heritability is in the field

Benjamin Brachi , Geoffrey P. Morris , Justin O. Borevitz
Genome Biology, 2011, 12 (10), pp.1-8. ⟨10.1186/gb-2011-12-10-232⟩
Journal articles hal-02649561v1

Adaptation to climate across the Arabidopsis thaliana genome.

Hancock A.M. , Benjamin Brachi , N. Faure , Horton M.W. , Jarymowycz L.B. et al.
Science, 2011, 334, pp.83-86. ⟨10.1126/science.1209244⟩
Journal articles hal-00644384v1

Genetic determination of male sterility in gynodioecious Silene nutans

C. Garraud , Benjamin Brachi , Mathilde Dufaÿ , Pascal Touzet , J.A. Shykoff et al.
Heredity, 2011, 106 (5), pp.757-764. ⟨10.1038/hdy.2010.116⟩
Journal articles hal-00563571v1

Gender variation and inbreeding depression in gynodioecious-gynomonoeicous Silene nutans (Caryophyllaceae)

Mathilde Dufaÿ , E. Lahiani , Benjamin Brachi
International Journal of Plant Sciences, 2010, 171, pp.53-62
Journal articles hal-00418794v1

Gender variation and inbreeding depression in gynodioecious‐gynomonoecious silene nutans (Caryophyllaceae)

Mathilde Dufaÿ , Emna Lahiani , Benjamin Brachi
International Journal of Plant Sciences, 2010, 171 (1), pp.53-62. ⟨10.1086/647916⟩
Journal articles hal-02663358v1
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Linkage and association mapping of Arabidopsis thaliana flowering time in nature

Benjamin Brachi , N. Faure , M. Horton , E. Flahauw , A. Vazquez et al.
PLoS Genetics, 2010, 6 (5), pp.e1000940. ⟨10.1371/journal.pgen.1000940⟩
Journal articles hal-00468455v1

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

Susanna Atwell , Yu S. Huang , Bjarni J. Vilhjálmsson , Glenda Willems , Matthew Horton et al.
Nature, 2010, 465 (7298), pp.627-631. ⟨10.1038/nature08800⟩
Journal articles hal-02668838v1

Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines

S. Atwell , Huang Y.S. , Vilhjalmsson B.J. , G. Willems , M. Horton et al.
Nature, 2010, 465, pp.627-631
Journal articles hal-00468440v1

Annotation of oak leaf metabolome for genetic and ecological studies

Stéphane Bernillon , Grégoire Leprovost , Céline Lalanne , Annick Moing , Benjamin Brachi et al.
11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P11, 2018, 11. Journées Scientifiques du RFMF
Conference poster hal-03125656v1