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Benjamin Brachi

CRCN dans l'UMR INRAE BIOGECO co-responsable du collectif E4E
33
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Reduced within-population quantitative genetic variation is associated with climate harshness in maritime pine

Juliette Archambeau , Marta Benito-Garzón , Marina de Miguel , Benjamin Brachi , Frederic Barraquand
Article dans une revue hal-04101611v1
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Plant genetic effects on microbial hubs impact host fitness in repeated field trials

Benjamin Brachi , Daniele Filiault , Hannah Whitehurst , Paul Darme , Pierre Le Gars
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (30), pp.1-12. ⟨10.1073/pnas.2201285119/-/DCSupplemental⟩
Article dans une revue hal-03778825v1
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Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie
Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩
Article dans une revue hal-03771214v1

Assessing the potential to harness the microbiome through plant genetics

Joy Bergelson , Benjamin Brachi , Fabrice Roux , Fabienne Vailleau
Current Opinion in Biotechnology, 2021, 70, pp.167-173. ⟨10.1016/j.copbio.2021.05.007⟩
Article dans une revue hal-03282418v1

Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions

Kathleen Beilsmith , Manus P.M. Thoen , Benjamin Brachi , Andrew D. Gloss , Mohammad H. Khan
Plant Journal, 2019, 97 (1), pp.164-181. ⟨10.1111/tpj.14170⟩
Article dans une revue hal-02626936v1

The genetics of exapted resistance to two exotic pathogens in pedunculate oak

Jérôme Bartholome , Benjamin Brachi , Benoit Marçais , Amira Mougou , Catherine Bodenes
New Phytologist, 2019, online first, pp.1-16. ⟨10.1111/nph.16319⟩
Article dans une revue hal-02619694v1

Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth

Thomas Damestoy , Benjamin Brachi , Xoaquín Moreira , Herve Jactel , Christophe Plomion
Tree Physiology, 2019, 39 (4), pp.615-627. ⟨10.1093/treephys/tpy149⟩
Article dans une revue hal-02617788v1
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Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot

Jia-Hui Chen , Yuan Huang , Benjamin Brachi , Quan-Zheng Yun , Wei Zhang
Nature Communications, 2019, 10 (1), pp.1-12. ⟨10.1038/s41467-019-13128-y⟩
Article dans une revue hal-02619675v1

Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies

Fabienne van Rossum , Hélène Martin , Solenn Le Cadre , Benjamin Brachi , Maarten J.M. Christenhusz
Perspectives in Plant Ecology, Evolution and Systematics, 2018, 35, pp.44-51. ⟨10.1016/j.ppees.2018.10.003⟩
Article dans une revue hal-02621000v1
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The rate and potential relevance of new mutations in a colonizing plant lineage

Moises Exposito-Alonso , Claude Becker , Verena J. Schuenemann , Ella Reiter , Claudia Setzer
PLoS Genetics, 2018, 14 (2), pp.1-21. ⟨10.1371/journal.pgen.1007155⟩
Article dans une revue hal-02625418v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559v1
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Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana

Benjamin Brachi , Christopher G Meyer , Romain Villoutreix , Alexander Platt , Timothy C Morton
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (13), pp.4032-4037. ⟨10.1073/pnas.1421416112⟩
Article dans une revue hal-01134027v1

Genome-wide association mapping of flowering time in Arabidopsis thaliana in nature: genetics for underlying components and reaction norms across two successive years.

Benjamin Brachi , N. Faure , J. Bergelson , J. Cuguen , F. Roux
Acta Botanica Gallica, 2013, 160 (3-4), pp.205-219. ⟨10.1080/12538078.2013.807302⟩
Article dans une revue hal-01110775v1

Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana

Benjamin Brachi , R. Villoutreix , N. Faure , Hautekèete N.-C. , Y. Piquot
Molecular Ecology, 2013, 22 (16), pp.4222-4240. ⟨10.1111/mec.12396⟩
Article dans une revue hal-00860399v1
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Adaptive value of phenological traits in stressful environments: predictions based on seed production and laboratory natural selection

Benjamin Brachi , Carole Aimé , C. Glorieux , J. Cuguen , F. Roux
PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩
Article dans une revue hal-00685041v1
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Adaptive Value of Phenological Traits in Stressful Environments: Predictions Based on Seed Production and Laboratory Natural Selection

Benjamin Brachi , Carla Aimé , Cédric Glorieux , Joël Cuguen , Fabrice Roux
PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩
Article dans une revue hal-03114034v1

Adaptation to climate across the Arabidopsis thaliana genome.

Hancock A.M. , Benjamin Brachi , N. Faure , Horton M.W. , Jarymowycz L.B.
Science, 2011, 334, pp.83-86. ⟨10.1126/science.1209244⟩
Article dans une revue hal-00644384v1
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Genome-wide association studies in plants: the missing heritability is in the field

Benjamin Brachi , Geoffrey P. Morris , Justin O. Borevitz
Genome Biology, 2011, 12 (10), pp.1-8. ⟨10.1186/gb-2011-12-10-232⟩
Article dans une revue hal-02649561v1

Genetic determination of male sterility in gynodioecious Silene nutans

C. Garraud , Benjamin Brachi , Mathilde Dufaÿ , Pascal Touzet , J.A. Shykoff
Heredity, 2011, 106 (5), pp.757-764. ⟨10.1038/hdy.2010.116⟩
Article dans une revue hal-00563571v1

Gender variation and inbreeding depression in gynodioecious-gynomonoeicous Silene nutans (Caryophyllaceae)

Mathilde Dufaÿ , E. Lahiani , Benjamin Brachi
International Journal of Plant Sciences, 2010, 171, pp.53-62
Article dans une revue hal-00418794v1
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Linkage and association mapping of Arabidopsis thaliana flowering time in nature

Benjamin Brachi , N. Faure , M. Horton , E. Flahauw , A. Vazquez
PLoS Genetics, 2010, 6 (5), pp.e1000940. ⟨10.1371/journal.pgen.1000940⟩
Article dans une revue hal-00468455v1

Gender variation and inbreeding depression in gynodioecious‐gynomonoecious silene nutans (Caryophyllaceae)

Mathilde Dufaÿ , Emna Lahiani , Benjamin Brachi
International Journal of Plant Sciences, 2010, 171 (1), pp.53-62. ⟨10.1086/647916⟩
Article dans une revue hal-02663358v1

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

Susanna Atwell , Yu S. Huang , Bjarni J. Vilhjálmsson , Glenda Willems , Matthew Horton
Nature, 2010, 465 (7298), pp.627-631. ⟨10.1038/nature08800⟩
Article dans une revue hal-02668838v1

Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines

S. Atwell , Huang Y.S. , Vilhjalmsson B.J. , G. Willems , M. Horton
Nature, 2010, 465, pp.627-631
Article dans une revue hal-00468440v1

Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso
2. EvolTree Conference, Alexandru Lucian Curtu, UNITBV ; Elena Ciocirlan, UNITBV ; Nicolae Sofletea, UNITBV, Sep 2023, Brasov, Romania. ⟨10.1101/2023.04.07.536008⟩
Communication dans un congrès hal-04207231v1
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Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea)

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso
Congress of the European Society for Evolutionary Biology (ESEB), Lukáš Kratochvíl, Aug 2019, Prague (Czech Republic), Czech Republic
Communication dans un congrès hal-04144342v1

Genetic architecture of water use efficiency across two oak species and their hybrids

Oliver Brendel , Benjamin Brachi , Catherine Bodenes-Brezard , Patricia Faivre-Rampant , Christophe Plomion
Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shanghai, China
Communication dans un congrès hal-02786594v1

Annotation of oak leaf metabolome for genetic and ecological studies

Stéphane Bernillon , Grégoire Leprovost , Céline Lalanne , Annick Moing , Benjamin Brachi
11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P11, 2018, 11. Journées Scientifiques du RFMF
Poster de conférence hal-03125656v1