CV Home - Archive ouverte HAL

	Reduced within-population quantitative genetic variation is associated with climate harshness in maritime pine Juliette Archambeau , Marta Benito-Garzón , Marina de Miguel , Benjamin Brachi , Frederic Barraquand Heredity, inPress, ⟨10.1038/s41437-023-00622-9⟩ Journal articles hal-04101611v1
	Plant genetic effects on microbial hubs impact host fitness in repeated field trials Benjamin Brachi , Daniele Filiault , Hannah Whitehurst , Paul Darme , Pierre Le Gars Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (30), pp.1-12. ⟨10.1073/pnas.2201285119/-/DCSupplemental⟩ Journal articles hal-03778825v1
	Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩ Journal articles hal-03771214v1
	Assessing the potential to harness the microbiome through plant genetics Joy Bergelson , Benjamin Brachi , Fabrice Roux , Fabienne Vailleau Current Opinion in Biotechnology, 2021, 70, pp.167-173. ⟨10.1016/j.copbio.2021.05.007⟩ Journal articles hal-03282418v1
	Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions Kathleen Beilsmith , Manus P.M. Thoen , Benjamin Brachi , Andrew D. Gloss , Mohammad H. Khan The Plant Journal, 2019, 97 (1), pp.164-181. ⟨10.1111/tpj.14170⟩ Journal articles hal-02626936v1
	The genetics of exapted resistance to two exotic pathogens in pedunculate oak Jérôme Bartholome , Benjamin Brachi , Benoit Marçais , Amira Mougou , Catherine Bodenes New Phytologist, 2019, online first, pp.1-16. ⟨10.1111/nph.16319⟩ Journal articles hal-02619694v1
	Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth Thomas Damestoy , Benjamin Brachi , Xoaquín Moreira , Herve Jactel , Christophe Plomion Tree Physiology, 2019, 39 (4), pp.615-627. ⟨10.1093/treephys/tpy149⟩ Journal articles hal-02617788v1
	Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot Jia-Hui Chen , Yuan Huang , Benjamin Brachi , Quan-Zheng Yun , Wei Zhang Nature Communications, 2019, 10 (1), pp.1-12. ⟨10.1038/s41467-019-13128-y⟩ Journal articles hal-02619675v1
	Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies Fabienne van Rossum , Hélène Martin , Solenn Le Cadre , Benjamin Brachi , Maarten J.M. Christenhusz Perspectives in Plant Ecology, Evolution and Systematics, 2018, 35, pp.44-51. ⟨10.1016/j.ppees.2018.10.003⟩ Journal articles hal-02621000v1
	Oak genome reveals facets of long lifespan Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩ Journal articles hal-01820559v1
	The rate and potential relevance of new mutations in a colonizing plant lineage Moises Exposito-Alonso , Claude Becker , Verena J. Schuenemann , Ella Reiter , Claudia Setzer PLoS Genetics, 2018, 14 (2), pp.1-21. ⟨10.1371/journal.pgen.1007155⟩ Journal articles hal-02625418v1
	Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana Benjamin Brachi , Christopher G Meyer , Romain Villoutreix , Alexander Platt , Timothy C Morton Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (13), pp.4032-4037. ⟨10.1073/pnas.1421416112⟩ Journal articles hal-01134027v1
	Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana Benjamin Brachi , R. Villoutreix , N. Faure , Hautekèete N.-C. , Y. Piquot Molecular Ecology, 2013, 22 (16), pp.4222-4240. ⟨10.1111/mec.12396⟩ Journal articles hal-00860399v1
	Genome-wide association mapping of flowering time in Arabidopsis thaliana in nature: genetics for underlying components and reaction norms across two successive years. Benjamin Brachi , N. Faure , J. Bergelson , J. Cuguen , F. Roux Acta Botanica Gallica, 2013, 160 (3-4), pp.205-219. ⟨10.1080/12538078.2013.807302⟩ Journal articles hal-01110775v1
	Adaptive Value of Phenological Traits in Stressful Environments: Predictions Based on Seed Production and Laboratory Natural Selection Carla Aimé , Benjamin Brachi , Cédric Glorieux , Joël Cuguen , Fabrice Roux PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩ Journal articles hal-03114034v1
	Adaptive value of phenological traits in stressful environments: predictions based on seed production and laboratory natural selection Benjamin Brachi , Carole Aimé , C. Glorieux , J. Cuguen , F. Roux PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩ Journal articles hal-00685041v1
	Genome-wide association studies in plants: the missing heritability is in the field Benjamin Brachi , Geoffrey P. Morris , Justin O. Borevitz Genome Biology, 2011, 12 (10), pp.1-8. ⟨10.1186/gb-2011-12-10-232⟩ Journal articles hal-02649561v1
	Adaptation to climate across the Arabidopsis thaliana genome. Hancock A.M. , Benjamin Brachi , N. Faure , Horton M.W. , Jarymowycz L.B. Science, 2011, 334, pp.83-86. ⟨10.1126/science.1209244⟩ Journal articles hal-00644384v1
	Genetic determination of male sterility in gynodioecious Silene nutans C. Garraud , Benjamin Brachi , Mathilde Dufaÿ , Pascal Touzet , J.A. Shykoff Heredity, 2011, 106 (5), pp.757-764. ⟨10.1038/hdy.2010.116⟩ Journal articles hal-00563571v1
	Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines Susanna Atwell , Yu S. Huang , Bjarni J. Vilhjálmsson , Glenda Willems , Matthew Horton Nature, 2010, 465 (7298), pp.627-631. ⟨10.1038/nature08800⟩ Journal articles hal-02668838v1
	Linkage and association mapping of Arabidopsis thaliana flowering time in nature Benjamin Brachi , N. Faure , M. Horton , E. Flahauw , A. Vazquez PLoS Genetics, 2010, 6 (5), pp.e1000940. ⟨10.1371/journal.pgen.1000940⟩ Journal articles hal-00468455v1
	Gender variation and inbreeding depression in gynodioecious‐gynomonoecious silene nutans (Caryophyllaceae) Mathilde Dufaÿ , Emna Lahiani , Benjamin Brachi International Journal of Plant Sciences, 2010, 171 (1), pp.53-62. ⟨10.1086/647916⟩ Journal articles hal-02663358v1
	Gender variation and inbreeding depression in gynodioecious-gynomonoeicous Silene nutans (Caryophyllaceae) Mathilde Dufaÿ , E. Lahiani , Benjamin Brachi International Journal of Plant Sciences, 2010, 171, pp.53-62 Journal articles hal-00418794v1
	Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines S. Atwell , Huang Y.S. , Vilhjalmsson B.J. , G. Willems , M. Horton Nature, 2010, 465, pp.627-631 Journal articles hal-00468440v1

	Species-specific epigenetic responses to drought stress of two sympatric oak species reflect their ecological preferences. Bernadette Rubio , Gregoire Le Provost , Benjamin Brachi , Theo Gerardin , Oliver Brendel 2023 Preprints, Working Papers, ... hal-04222909v1
	Genetic variants affecting plant size and chemical defenses jointly shape herbivory in Arabidopsis Andrew D Gloss , Benjamin Brachi , Mitchell J Feldmann , Simon C Groen , Claudia Bartoli 2023 Preprints, Working Papers, ... hal-02947607v1
	Extensive variation of leaf specialized metabolite production in sessile oak ( Quercus petraea ) populations is to a large extent genetically determined but not locally adaptive Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le-Provost , Antoine Kremer , Alexis Ducousso 2023 Preprints, Working Papers, ... hal-04144753v1
	Extreme climatic events but not environmental heterogeneity shape within-population genetic variation in maritime pine Juliette Archambeau , Marta Benito-Garzón , Marina de Miguel Vega , Benjamin Brachi , Frédéric Barraquand 2021 Preprints, Working Papers, ... hal-03372229v1
	Water stress-associated isolation barriers between two sympatric oak species Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie 2021 Preprints, Working Papers, ... hal-03351973v1

	Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso 2. EvolTree Conference, Alexandru Lucian Curtu, UNITBV ; Elena Ciocirlan, UNITBV ; Nicolae Sofletea, UNITBV, Sep 2023, Brasov, Romania. ⟨10.1101/2023.04.07.536008⟩ Conference papers hal-04207231v1
	Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea) Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso Congress of the European Society for Evolutionary Biology (ESEB), Lukáš Kratochvíl, Aug 2019, Prague (Czech Republic), Czech Republic Conference papers hal-04144342v1
	Genetic architecture of water use efficiency across two oak species and their hybrids Oliver Brendel , Benjamin Brachi , Catherine Bodenes-Brezard , Patricia Faivre-Rampant , Christophe Plomion Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shanghai, China Conference papers hal-02786594v1

	Annotation of oak leaf metabolome for genetic and ecological studies Stéphane Bernillon , Grégoire Leprovost , Céline Lalanne , Annick Moing , Benjamin Brachi 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P11, 2018, 11. Journées Scientifiques du RFMF Conference poster hal-03125656v1

Benjamin Brachi

Publications

Reduced within-population quantitative genetic variation is associated with climate harshness in maritime pine

Plant genetic effects on microbial hubs impact host fitness in repeated field trials

Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Assessing the potential to harness the microbiome through plant genetics

Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions

The genetics of exapted resistance to two exotic pathogens in pedunculate oak

Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth

Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot

Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies

Oak genome reveals facets of long lifespan

The rate and potential relevance of new mutations in a colonizing plant lineage

Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana

Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana

Genome-wide association mapping of flowering time in Arabidopsis thaliana in nature: genetics for underlying components and reaction norms across two successive years.

Adaptive Value of Phenological Traits in Stressful Environments: Predictions Based on Seed Production and Laboratory Natural Selection

Adaptive value of phenological traits in stressful environments: predictions based on seed production and laboratory natural selection

Genome-wide association studies in plants: the missing heritability is in the field

Adaptation to climate across the Arabidopsis thaliana genome.

Genetic determination of male sterility in gynodioecious Silene nutans

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

Linkage and association mapping of Arabidopsis thaliana flowering time in nature

Gender variation and inbreeding depression in gynodioecious‐gynomonoecious silene nutans (Caryophyllaceae)

Gender variation and inbreeding depression in gynodioecious-gynomonoeicous Silene nutans (Caryophyllaceae)

Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines

Species-specific epigenetic responses to drought stress of two sympatric oak species reflect their ecological preferences.

Genetic variants affecting plant size and chemical defenses jointly shape herbivory in Arabidopsis

Extensive variation of leaf specialized metabolite production in sessile oak ( Quercus petraea ) populations is to a large extent genetically determined but not locally adaptive

Extreme climatic events but not environmental heterogeneity shape within-population genetic variation in maritime pine

Water stress-associated isolation barriers between two sympatric oak species

Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations

Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea)

Genetic architecture of water use efficiency across two oak species and their hybrids

Annotation of oak leaf metabolome for genetic and ecological studies