Benjamin Roche

146
Documents

Publications

Publications

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Experimental evolution of Plasmodium yoelii in single and helminth-coinfected mice.

Aloïs Dusuel , Luc Bourbon , Emma Groetz , Mickaël Rialland , Benjamin Roche et al.
Malaria Journal, 2026, 25, pp.63. ⟨10.1186/s12936-025-05764-1⟩
Article dans une revue hal-05488499 v1
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Increasing the resolution of malaria early warning systems for use by local health actors

Michelle Evans , Felana Ihantamalala , Mauricianot Randriamihaja , Vincent Herbreteau , Christophe Révillion et al.
Malaria Journal, 2025, 24 (1), pp.30. ⟨10.1186/s12936-025-05266-0⟩
Article dans une revue hal-05004950 v1
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Disease severity in coinfected hosts: the importance of infection order.

Aloïs Dusuel , Luc Bourbon , Emma Groetz , Nicolas Pernet , Mickaël Rialland et al.
Peer Community Journal, 2025, 5, pp.e109. ⟨10.24072/pcjournal.635⟩
Article dans une revue hal-05344772 v1

Leveraging Small Biodiversity Reserves to Prevent Zoonotic Disease: Insights from Dilution Effect and Pathogen Adaptation Theories

Audrey Arnal , Rodolphe Elie Gozlan , Nathalie Charbonnel , Marie Bouilloud , Andrea Chaves et al.
Disease Biology, Genetics, and Socioecology, 2025, pp.6. ⟨10.53941/dbgs.2025.100006⟩
Article dans une revue hal-05506262 v1
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Leveraging selection for function in tumor evolution: System-level cancer therapies

Frédéric Thomas , Jean-Pascal Capp , Antoine Dujon , Andriy Marusyk , Klara Asselin et al.
Evolution, Medicine, and Public Health, 2025, 13 (1), pp.248-268. ⟨10.1093/emph/eoaf022⟩
Article dans une revue hal-05354521 v1

Bat coronavirus surveillance across different habitats in Yucatán, México

Marco Antonio Jiménez-Rico , Ana Laura Vigueras-Galván , Erika Hernández-Villegas , Paola Martínez-Duque , David A Roiz et al.
Virology, 2025, 603, pp.110401. ⟨10.1016/j.virol.2025.110401⟩
Article dans une revue hal-04968653 v1

Characterization of the Virome in Mosquitoes Across Distinct Habitats in the Yucatán Peninsula, Mexico

Erika Hernández-Villegas , Hugo Castelán-Sánchez , Andres Moreira-Soto , Ana Laura Vigueras-Galván , Marco Jiménez-Rico et al.
Viruses, 2025, 17 (6), pp.758. ⟨10.3390/v17060758⟩
Article dans une revue hal-05506258 v1
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In vitro competition between two transmissible cancers and potential implications for their host, the Tasmanian devil

Anne‐lise Gérard , Rachel Owen , Antoine M Dujon , Benjamin Roche , Rodrigo Hamede et al.
Evolutionary Applications, 2024, 17 (3), pp.e13670. ⟨10.1111/eva.13670⟩
Article dans une revue hal-04502362 v1
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Heterogeneity in elimination efforts could increase the risk of resurgence of lymphatic filariasis in Madagascar

Elinambinina Rajaonarifara , Benjamin Roche , Cedric Chesnais , Holivololona Rabenantoandro , Michelle Evans et al.
Infection, Genetics and Evolution, 2024, 120, pp.105589. ⟨10.1016/j.meegid.2024.105589⟩
Article dans une revue hal-04543854 v1
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Cancer and One Health: tumor-bearing individuals can act as super spreaders of symbionts in communities

Sophie Tissot , Jordan Meliani , Matthew Chee , Aurora M Nedelcu , Justine Boutry et al.
Scientific Reports, 2024, 14 (1), pp.21283. ⟨10.1038/s41598-024-72171-y⟩
Article dans une revue hal-04939905 v1
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Approaches and methods to study wildlife cancer

Mathieu Giraudeau , Samuel Pavard , Orsolya Vincze , Sophie Dupont , Tuul Sepp et al.
Journal of Animal Ecology, 2024, ⟨10.1111/1365-2656.14144⟩
Article dans une revue hal-04695424 v1
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De novo evolution of transmissible tumours in hydra

Sophie Tissot , Jordan Meliani , Justine Boutry , Lionel Brazier , Jácint Tökölyi et al.
Proceedings of the Royal Society B: Biological Sciences, 2024, 291, ⟨10.1098/rspb.2024.1636⟩
Article dans une revue hal-04932195 v1

First Record of the Tribe Orthopodomyiini in the Yucatan Peninsula

Roger Arana-Guardia , Omar García-Suárez , Paola Martínez-Duque , María Tolsá-García , Ana Vigueras-Galván et al.
Journal of the American Mosquito Control Association, 2024, 40 (2), pp.109-111. ⟨10.2987/24-7173⟩
Article dans une revue hal-04935156 v1
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One health and social research in disease ecology: A social contextual study of vector-borne diseases in the Yucatan Peninsula, Mexico

Mitsuri Pacheco-Zapata , Fernanda Pérez-Lombardini , Benjamin Roche , Audrey Arnal , Erika Marcé et al.
Social Science & Medicine, 2024, 362, pp.117415. ⟨10.1016/j.socscimed.2024.117415⟩
Article dans une revue hal-04937664 v1
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Exploring the potential effects of forest urbanization on the interplay between small mammal communities and their gut microbiota

Marie Bouilloud , Maxime Galan , Julien Pradel , Anne Loiseau , Julien Ferrero et al.
Animal Microbiome, 2024, 6, pp.16. ⟨10.1186/s42523-024-00301-y⟩
Article dans une revue hal-04527902 v1
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Achieving inter- and transdisciplinarity in Ecohealth: insights from a rodent-borne disease project in a polycrisis era

Isabelle Arpin , Clémence Massart , Vincent Bourret , Guillaume Castel , Valeria Carolina Colombo et al.
Frontiers in Veterinary Science, 2024, 11, pp.1235183. ⟨10.3389/fvets.2024.1235183⟩
Article dans une revue hal-04912116 v2
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SARS-CoV-2 BW lineage, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations

Rodrigo García-López , Xaira Rivera-Gutiérrez , Mauricio Rosales-Rivera , Selene Zárate , José Esteban Muñoz-Medina et al.
Infection, 2023, 51 (5), pp.1549-1555. ⟨10.1007/s15010-023-02034-7⟩
Article dans une revue hal-04943144 v1

Sociodemographic Variables Can Guide Prioritized Testing Strategies for Epidemic Control in Resource-Limited Contexts

Michelle Evans , Tanjona Ramiadantsoa , Kayla Kauffman , James Moody , Charles Nunn et al.
Journal of Infectious Diseases, 2023, 228 (9), pp.1189-1197. ⟨10.1093/infdis/jiad076⟩
Article dans une revue hal-04969872 v1
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The tumour is in the detail: Local phylogenetic, population and epidemiological dynamics of a transmissible cancer in Tasmanian devils

Rodrigo Hamede , Nicholas Fountain‐jones , Fernando Arce , Menna Jones , Andrew Storfer et al.
Evolutionary Applications, 2023, 16 (7), pp.1316-1327. ⟨10.1111/eva.13569⟩
Article dans une revue hal-04220911 v1
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The values and risks of an Intergovernmental Panel for One Health to strengthen pandemic prevention, preparedness, and response

A. Hobeika , M.H.T. Stauffer , T. Dub , W. van Bortel , M Beniston et al.
The Lancet global health, 2023, 11 (8), pp.e1301-1307. ⟨10.1016/S2214-109X(23)00246-2⟩
Article dans une revue hal-04266374 v1

Network Analysis of Hosts and Vectors in the Multiple Transmissions of Flavivirus

Fabiola Nieto-Rabiela , Fernando Esponda , Benjamin Roche , Gerardo Suzán
Vector Borne and Zoonotic Diseases, 2023, 23 (10), pp.537-543. ⟨10.1089/vbz.2022.0062⟩
Article dans une revue hal-04970014 v1
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Operationalizing One Health: Environmental Solutions for Pandemic Prevention

Hernan Caceres-Escobar , Luigi Maiorano , Carlo Rondinini , Marta Cimatti , Serge Morand et al.
Article dans une revue hal-04178875 v1
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Number of lifetime menses increases breast cancer occurrence in postmenopausal women at high familial risk

Margaux Bieuville , Dominique Faugère , Virginie Galibert , Morgane Henard , Antoine M Dujon et al.
Frontiers in Ecology and Evolution, 2023, 11, pp.912083. ⟨10.3389/fevo.2023.912083⟩
Article dans une revue hal-04110719 v1
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Interaction of Human Behavioral Factors Shapes the Transmission of Arboviruses by Aedes and Culex Mosquitoes

Aubane Renard , Fernanda Pérez Lombardini , Mitsuri Pacheco Zapata , Thibaud Porphyre , Ana Bento et al.
Pathogens, 2023, 12 (12), pp.1421. ⟨10.3390/pathogens12121421⟩
Article dans une revue hal-04326353 v1
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The impact of food availability on tumorigenesis is evolutionarily conserved

Sophie Tissot , Lena Guimard , Jordan Meliani , Justine Boutry , Antoine M Dujon et al.
Scientific Reports, 2023, 13 (1), pp.19825. ⟨10.1038/s41598-023-46896-1⟩
Article dans une revue hal-04423495 v1
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Three-way relationships between gut microbiota, helminth assemblages and bacterial infections in wild rodent populations

Marie Bouilloud , Maxime Galan , Adelaide Dubois , Christophe Diagne , Philippe Marianneau et al.
Peer Community In Infections, 2023, 3, pp.e18. ⟨10.24072/pcjournal.243⟩
Article dans une revue hal-04788935 v1
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The paradox of cooperation among selfish cancer cells

Jean‐pascal Capp , Frédéric Thomas , Andriy Marusyk , Antoine M Dujon , Sophie Tissot et al.
Evolutionary Applications, 2023, 16 (7), pp.1239-1256. ⟨10.1111/eva.13571⟩
Article dans une revue hal-04211346 v2
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Prioritizing COVID-19 vaccination efforts and dose allocation within Madagascar

Fidisoa Rasambainarivo , Tanjona Ramiadantsoa , Antso Raherinandrasana , Santatra Randrianarisoa , Benjamin L. Rice et al.
BMC Public Health, 2022, 22 (1), pp.724. ⟨10.1186/s12889-022-13150-8⟩
Article dans une revue hal-04979336 v1
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Using haematophagous fly blood meals to study the diversity of blood‐borne pathogens infecting wild mammals

Solomon Mwakasungula , Virginie Rougeron , C. Arnathau , Larson Boundenga , Eve Miguel et al.
Molecular Ecology Resources, 2022, 22 (8), pp.2915-2927. ⟨10.1111/1755-0998.13670⟩
Article dans une revue hal-03745684 v1
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Drivers of flea abundance in wild rodents across local and regional scales in the Chihuahuan Desert, northwestern Mexico

Paulina Pontifes , Adriana Fernández-González , Gabriel García-Peña , Benjamin Roche , Gerardo Suzán
Ecosphere, 2022, 13 (4), pp.e4013. ⟨10.1002/ecs2.4013⟩
Article dans une revue hal-04978794 v1
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Dengue virus infection modifies mosquito blood-feeding behavior to increase transmission to the host

Benjamin Wong Wei Xiang , Wilfried Saron , James Stewart , Arthur Hain , Varsha Walvekar et al.
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (3), pp.e2117589119. ⟨10.1073/pnas.2117589119⟩
Article dans une revue hal-03521021 v2
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A preoperative nomogram for predicting long-term survival after resection of large hepatocellular carcinoma (>10 cm)

Eloy Ruiz , Pascal Pineau , Claudio Flores , Ramiro Fernández , Luis Cano et al.
HPB, 2022, 24 (2), pp.192-202. ⟨10.1016/j.hpb.2021.06.006⟩
Article dans une revue hal-03275264 v1
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Retrospective analysis of SARS-CoV-2 omicron invasion over delta in French regions in 2021–22: a status-based multi-variant model

Thomas Haschka , Elisabeta Vergu , Benjamin Roche , Chiara Poletto , Lulla Opatowski
BMC Infectious Diseases, 2022, 22 (1), pp.815. ⟨10.1186/s12879-022-07821-5⟩
Article dans une revue hal-03888881 v1
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Molecular survey of Zika virus in the animal-human interface in traditional farming

Laura Ivone Lopez-Apodaca , Heliot Zarza , Emily Zamudio-Moreno , Daniel Nuñez-Avellaneda , Carlos Marcial Baak-Baak et al.
Frontiers in Veterinary Science, 2022, 9, 1057686 [14 p.]. ⟨10.3389/fvets.2022.1057686⟩
Article dans une revue hal-04978567 v1

A Short COVID-19 Outbreak in an Isolated Pacific Island: A Retrospective Study

Clément Couteaux , Eliuti Gahetau , Geneviève Robic , Daniel Houillon , Falakiko Lenei et al.
Asia-Pacific Journal of Public Health, 2022, 34 (5), pp.586-588. ⟨10.1177/10105395221106863⟩
Article dans une revue hal-04980678 v1
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Transmissible Cancer Evolution: The Under-Estimated Role of Environmental Factors in the “Perfect Storm” Theory

Sophie Tissot , Anne-Lise Gérard , Justine Boutry , Antoine M Dujon , Tracey Russel et al.
Pathogens, 2022, 11 (2), pp.241. ⟨10.3390/pathogens11020241⟩
Article dans une revue hal-04400244 v1
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Estimating chikungunya virus transmission parameters and vector control effectiveness highlights key factors to mitigate arboviral disease outbreaks

Frédéric Jourdain , Henriette de Valk , Harold Noël , Marie-Claire Paty , Grégory L'Ambert et al.
PLoS Neglected Tropical Diseases, 2022, 16 (3), pp.e0010244. ⟨10.1371/journal.pntd.0010244⟩
Article dans une revue hal-04981585 v1
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Identification of factors associated with residual malaria transmission using school-based serological surveys in settings pursuing elimination

Jean Marius Rakotondramanga , Inès Vigan-Womas , Laura C. Steinhardt , Aina Harimanana , Elisabeth Ravaoarisoa et al.
Malaria Journal, 2022, 21, ⟨10.1186/s12936-022-04260-0⟩
Article dans une revue hal-03808120 v1
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Tumors alter life history traits in the freshwater cnidarian, Hydra oligactis

Justine Boutry , Sophie Tissot , Antoine Dujon , Jordan Meliani , Rodrigo Hamede et al.
iScience, 2022, 25 (10), pp.105034. ⟨10.1016/j.isci.2022.105034⟩
Article dans une revue hal-04112094 v1
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Impact of health system strengthening on delivery strategies to improve child immunisation coverage and inequalities in rural Madagascar

Elinambinina Rajaonarifara , Matthew H Bonds , Ann C Miller , Felana Angella Ihantamalala , Laura Cordier et al.
BMJ Global Health, 2022, 7 (1), pp.e006824. ⟨10.1136/bmjgh-2021-006824⟩
Article dans une revue hal-03529747 v1
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Perte de biodiversité, prélude aux émergences virales

Benjamin Roche , Serge Morand
Médecine/Sciences, 2022, 38 (12), pp.1039-1042. ⟨10.1051/medsci/2022160⟩
Article dans une revue hal-03897505 v1
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Cancer Susceptibility as a Cost of Reproduction and Contributor to Life History Evolution

Antoine M Dujon , Justine Boutry , Sophie Tissot , Jean-François Lemaître Lemaître , Amy Boddy et al.
Frontiers in Ecology and Evolution, 2022, 10, pp.861103. ⟨10.3389/fevo.2022.861103⟩
Article dans une revue hal-03663551 v1
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PREZODE: preventing zoonotic disease emergence

Marisa Peyre , Gwenaël Vourc’h , Thierry Lefrançois , Yves Martin-Prével , Jean-François Soussana et al.
The Lancet, 2021, 397 (10276), pp.792-793. ⟨10.1016/S0140-6736(21)00265-8⟩
Article dans une revue hal-03155118 v1
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Group phenotypic composition in cancer

Jean-Pascal Capp , James Degregori , Aurora M Nedelcu , Antoine M Dujon , Justine Boutry et al.
eLife, 2021, 10, pp.e63518. ⟨10.7554/eLife.63518⟩
Article dans une revue hal-03261102 v1
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Reliability of animal counts and implications for the interpretation of trends

David Vallecillo , Michel Gauthier‐clerc , Matthieu Guillemain , Marion Vittecoq , Philippe Vandewalle et al.
Ecology and Evolution, 2021, 11, pp.2249 - 2260. ⟨10.1002/ece3.7191⟩
Article dans une revue hal-03328016 v1
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A mechanistic and data-driven reconstruction of the time-varying reproduction number: Application to the COVID-19 epidemic

Bernard Cazelles , Clara Champagne , Benjamin Nguyen-Van-Yen , Catherine Comiskey , Elisabeta Vergu et al.
PLoS Computational Biology, 2021, 17 (7), pp.e1009211. ⟨10.1371/journal.pcbi.1009211⟩
Article dans une revue hal-03346530 v1
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Darwinian approaches for cancer treatment : benefits of mathematical modeling

Sophia Belkhir , Frederic Thomas , Benjamin Roche
Cancers, 2021, 13 (17), pp.4448. ⟨10.3390/cancers13174448⟩
Article dans une revue hal-04350098 v1
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Ecology, evolution, and epidemiology of zoonotic and vector-borne infectious diseases in French Guiana: Transdisciplinarity does matter to tackle new emerging threats

Benoît de Thoisy , Olivier Duron , Loïc Epelboin , Lise Musset , Philippe Quénel et al.
Infection, Genetics and Evolution, 2021, 93, pp.104916. ⟨10.1016/j.meegid.2021.104916⟩
Article dans une revue pasteur-03261181 v1
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Identifying key questions in the ecology and evolution of cancer

Antoine M Dujon , Athena Aktipis , Catherine Alix-Panabières , Sarah R Amend , Amy M Boddy et al.
Evolutionary Applications, 2021, 14 (4), pp.877-892. ⟨10.1111/eva.13190⟩
Article dans une revue hal-03164823 v1
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Does Cancer Biology Rely on Parrondo’s Principles ?

Jean-Pascal Capp , Aurora M Nedelcu , Antoine M Dujon , Benjamin Roche , Francesco Catania et al.
Cancers, 2021, 13 (9), pp.2197. ⟨10.3390/cancers13092197⟩
Article dans une revue hal-03274009 v1

Transmissible cancers in mammals and bivalves: How many examples are there?

Antoine Dujon , Georgina Bramwell , Benjamin Roche , Frédéric Thomas , Beata Ujvari
BioEssays, 2021, 43 (3), pp.e2000222. ⟨10.1002/bies.202000222⟩
Article dans une revue hal-04633114 v1
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The Rare, the Best: Spread of Antimalarial-Resistant Plasmodium falciparum Parasites by Anopheles Mosquito Vectors

Antoine Berry , Sandie Menard , Sandrine E Nsango , Luc Abate , Didier Concordet et al.
Microbiology Spectrum, 2021, 9 (2), ⟨10.1128/Spectrum.00852-21⟩
Article dans une revue hal-03510741 v1
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Inferring within‐flock transmission dynamics of highly pathogenic avian influenza H5N8 virus in France, 2020

Timothée Vergne , Simon Gubbins , Claire Guinat , Billy Bauzile , Mattias Delpont et al.
Transboundary and emerging diseases, 2021, 68 (6), pp.3151-3155. ⟨10.1111/tbed.14202⟩
Article dans une revue hal-03479732 v1
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Parallel trends in the transmission of SARS-CoV-2 and retail/recreation and public transport mobility during non-lockdown periods

Bernard Cazelles , Catherine Comiskey , Benjamin Nguyen-Van-Yen , Clara Champagne , Benjamin Roche
International Journal of Infectious Diseases, 2021, 104, pp.693-695. ⟨10.1016/j.ijid.2021.01.067⟩
Article dans une revue hal-03134842 v2
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On the need for integrating cancer into the One Health perspective

Antoine M Dujon , Joel S. Brown , Delphine Destoumieux-Garzon , Marion Vittecoq , Rodrigo Hamede et al.
Evolutionary Applications, 2021, 14 (11), pp.2571-2575. ⟨10.1111/eva.13303⟩
Article dans une revue hal-03372780 v1
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Field evidence for manipulation of mosquito host selection by the human malaria parasite, Plasmodium falciparum

Amélie Vantaux , Franck Yao , Domonbabele Fds Hien , Edwige Guissou , Bienvenue K Yameogo et al.
Peer Community Journal, 2021, 1, pp.e13. ⟨10.24072/pcjournal.13⟩
Article dans une revue hal-04349954 v1
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Bridging Tumorigenesis and Therapy Resistance With a Non-Darwinian and Non-Lamarckian Mechanism of Adaptive Evolution

Francesco Catania , Beata Ujvari , Benjamin Roche , Jean‐pascal Capp , Frédéric Thomas
Frontiers in Oncology, 2021, 11, pp.732081. ⟨10.3389/fonc.2021.732081⟩
Article dans une revue hal-03442567 v1

Was the COVID‐19 pandemic avoidable? A call for a “solution‐oriented” approach in pathogen evolutionary ecology to prevent future outbreaks

Benjamin Roche , Andres Garchitorena , Jean‐françois Guégan , Audrey Arnal , David A Roiz et al.
Ecology Letters, 2020, 23 (11), pp.1557-1560. ⟨10.1111/ele.13586⟩
Article dans une revue hal-02944182 v1
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The impact of lockdown strategies targeting age groups on the burden of COVID-19 in France

Benjamin Roche , Andres Garchitorena , David A Roiz
Epidemics, 2020, 33, pp.100424 -. ⟨10.1016/j.epidem.2020.100424⟩
Article dans une revue hal-03493658 v1
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Predation shapes the impact of cancer on population dynamics and the evolution of cancer resistance

Cédric Perret , Cindy Gidoin , Beata Ujvari , Frédéric Thomas , Benjamin Roche
Evolutionary Applications, 2020, 13 (7), pp.1733-1744. ⟨10.1111/eva.12951⟩
Article dans une revue hal-04631519 v1
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A systemic approach to assess the potential and risks of wildlife culling for infectious disease control

Eve Miguel , Vladimir Grosbois , Alexandre Caron , Diane Pople , Benjamin Roche et al.
Communications Biology, 2020, 3 (1), ⟨10.1038/s42003-020-1032-z⟩
Article dans une revue hal-02911618 v1
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From importation to autochthonous transmission: Drivers of chikungunya and dengue emergence in a temperate area

Frédéric Jourdain , David A Roiz , Henriette de Valk , Harold Noël , Grégory L'Ambert et al.
PLoS Neglected Tropical Diseases, 2020, 14 (5), pp.e0008320. ⟨10.1371/journal.pntd.0008320⟩
Article dans une revue hal-04981899 v1
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Rare and unique adaptations to cancer in domesticated species: An untapped resource?

Frédéric Thomas , Mathieu Giraudeau , Nolwenn M. Dheilly , Flora Gouzerh , Justine Boutry et al.
Evolutionary Applications, 2020, 13 (7), pp.1605-1614. ⟨10.1111/eva.12920⟩
Article dans une revue hal-03778910 v1
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Cancer and mosquitoes – An unsuspected close connection

Audrey Arnal , Benjamin Roche , Louis-Clément Gouagna , Antoine M Dujon , Beata Ujvari et al.
Science of the Total Environment, 2020, 743, pp.140631. ⟨10.1016/j.scitotenv.2020.140631⟩
Article dans une revue hal-02959074 v1
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The role of innate immunity in the protection conferred by a bacterial infection against cancer: study of an invertebrate model

Camille Jacqueline , Jean-Philippe Parvy , Marie-Lou Rollin , Dominique Faugère , François Renaud et al.
Scientific Reports, 2020, 10 (1), pp.10106. ⟨10.1038/s41598-020-66813-0⟩
Article dans une revue hal-02960118 v1
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The evolution of resistance and tolerance as cancer defences

Frédéric Thomas , Mathieu Giraudeau , Flora Gouzerh , Justine Boutry , François Renaud et al.
Parasitology, 2020, 147 (3), pp.255-262. ⟨10.1017/S0031182019001501⟩
Article dans une revue hal-02469331 v1
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Exposure to Ebola Virus and Risk for Infection with Malaria Parasites, Rural Gabon

Jessica L. Abbate , Pierre Becquart , Eric M. Leroy , Vanessa O. Ezenwa , Benjamin Roche
Emerging Infectious Diseases, 2020, 26 (2), pp.229-237. ⟨10.3201/eid2602.181120⟩
Article dans une revue hal-04921032 v1
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Reconciling model predictions with low reported cases of COVID-19 in Sub-Saharan Africa: insights from Madagascar

Michelle Evans , Andres Garchitorena , Rado Rakotonanahary , John Drake , Benjamin Andriamihaja et al.
Global Health Action, 2020, 13 (1), pp.1816044. ⟨10.1080/16549716.2020.1816044⟩
Article dans une revue hal-02998394 v1
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The ecology and evolution of wildlife cancers: Applications for management and conservation

Rodrigo Hamede , Rachel Owen , Hannah Siddle , Sarah Peck , Menna Jones et al.
Evolutionary Applications, 2020, 13 (7), pp.1719 - 1732. ⟨10.1111/eva.12948⟩
Article dans une revue hal-03027879 v1
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The interface between ecology, evolution, and cancer: More than ever a relevant research direction for both oncologists and ecologists

Frédéric Thomas , Benjamin Roche , Mathieu Giraudeau , Rodrigo Hamede , Beata Ujvari
Evolutionary Applications, 2020, 13 (7), pp.1545 - 1549. ⟨10.1111/eva.13031⟩
Article dans une revue hal-03027897 v1
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Differences in mutational processes and intra-tumour heterogeneity between organs: the local selective filter hypothesis

Mathieu Giraudeau , Tuul Sepp , Beata Ujvari , François Renaud , Aurélie Tasiemski et al.
Evolution, Medicine, and Public Health, 2019, 2019 (1), pp.139-146. ⟨10.1093/emph/eoz017⟩
Article dans une revue hal-02468859 v1
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Transmissible cancer and the evolution of sex

Frédéric Thomas , Thomas Madsen , Mathieu Giraudeau , Dorothée Missé , Rodrigo Hamede et al.
PLoS Biology, 2019, 17 (6), pp.e3000275. ⟨10.1371/journal.pbio.3000275⟩
Article dans une revue hal-02469626 v1
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Can postfertile life stages evolve as an anticancer mechanism?

Frédéric Thomas , Mathieu Giraudeau , François Renaud , Beata Ujvari , Benjamin Roche et al.
PLoS Biology, 2019, 17 (12), pp.e3000565. ⟨10.1371/journal.pbio.3000565⟩
Article dans une revue hal-02445900 v1
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Natural Wolbachia infections are common in the major malaria vectors in Central Africa

Diego Ayala , Ousman Akone‐ella , Nil Rahola , Pierre Kengne , Marc Ngangue et al.
Evolutionary Applications, 2019, 12 (8), pp.1583-1594. ⟨10.1111/eva.12804⟩
Article dans une revue hal-02359156 v1
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Separating the Local and Malignant Dimensions of Cancer Adaptation

Benjamin Roche , Pierre Martinez
Cancer Informatics, 2019, 18, pp.1176935119872954. ⟨10.1177/1176935119872954⟩
Article dans une revue hal-04934927 v1
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Is adaptive therapy natural?

Frédéric Thomas , Emmanuel Donnadieu , Guillaume Charriere , Camille Jacqueline , Aurélie Tasiemski et al.
PLoS Biology, 2018, 16 (10), pp.e2007066. ⟨10.1371/journal.pbio.2007066⟩
Article dans une revue hal-01887358 v1

Evolved Dependence in Response to Cancer

Frédéric Thomas , Irina Kareva , Nynke Raven , Rodrigo Hamede , Pascal Pujol et al.
Trends in Ecology & Evolution, 2018, 33 (4), pp.269-276. ⟨10.1016/j.tree.2018.01.012⟩
Article dans une revue hal-02351466 v1
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Massive Iatrogenic Outbreak of Human Immunodeficiency Virus Type 1 in Rural Cambodia, 2014–2015

Francois Rouet , Janin Nouhin , Du-Ping Zheng , Benjamin Roche , Allison Black et al.
Clinical Infectious Diseases, 2018, 66 (11), pp.1733-1741. ⟨10.1093/cid/cix1071⟩
Article dans une revue hal-02393988 v1
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Fourth International Biannual Evolution and Cancer Conference (Resistance, resilience, and robustness: Can we target cancer's evolutionary and ecological nature?)

Benjamin Roche , Beata Ujvari , Fréderic Thomas
Evolutionary Applications, 2018, 11 (6), pp.829-835. ⟨10.1111/eva.12616⟩
Article dans une revue hal-02521772 v1
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Personal history of infections and immunotherapy: Unexpected links and possible therapeutic opportunities

Camille Jacqueline , Nathalie Bonnefoy , Guillaume Charrière , Frédéric Thomas , Benjamin Roche
OncoImmunology, 2018, 7 (8), pp.e1466019. ⟨10.1080/2162402X.2018.1466019⟩
Article dans une revue hal-01887524 v1

High prevalence and diversity of hepatitis B and hepatitis delta virus in Gabon

Soraya Groc , Jessica Lee Abbate , Frédéric Le Gal , Athenaïs Gerber , Edouard Tuaillon et al.
Journal of Viral Hepatitis, 2018, 26 (1), pp.i, 1-214. ⟨10.1111/jvh.12991⟩
Article dans une revue hal-01934736 v1
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The macroecology of cancer incidences in humans is associated with large-scale assemblages of endemic infections.

Camille Jacqueline , Jessica Lee Abbate , Gabriele Sorci , Jean-François Guégan , Frédéric Thomas et al.
Infection, Genetics and Evolution, 2018, 61, pp.189-196. ⟨10.1016/j.meegid.2018.03.016⟩
Article dans une revue hal-01785931 v1
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Disentangling complex parasite interactions: Protection against cerebral malaria by one helminth species is jeopardized by co-infection with another

Jessica Lee Abbate , Vanessa O Ezenwa , Jean-François Guégan , Marc Choisy , Mathieu Nacher et al.
PLoS Neglected Tropical Diseases, 2018, 12 (5), pp.e0006483. ⟨10.1371/journal.pntd.0006483⟩
Article dans une revue inserm-01872243 v1
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How is the evolution of tumour resistance at organ-scale impacted by the importance of the organ for fitness?

Cindy Gidoin , Beata Ujvari , Frédéric Thomas , Benjamin Roche
BMC Evolutionary Biology, 2018, 18, pp.185. ⟨10.1186/s12862-018-1298-7⟩
Article dans une revue hal-02503939 v1
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Can intestinal microbiota be associated with non-intestinal cancers ?

Camille Jacqueline , Lionel Brazier , Dominique Faugere , François Renaud , Frédéric Thomas et al.
Scientific Reports, 2017, 7, pp.12722. ⟨10.1038/s41598-017-11644-9⟩
Article dans une revue hal-02074618 v1
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Cancer brings forward oviposition in the fly Drosophila melanogaster

Audrey Arnal , Camille Jacqueline , Beata Ujvari , Lucas Leger , Céline Moreno et al.
Ecology and Evolution, 2017, 7 (1), pp.272 - 276. ⟨10.1002/ece3.2571⟩
Article dans une revue hal-01453447 v1
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Non-cell-autonomous effects yield lower clonal diversity in expanding tumors

Tazzio Tissot , Frédéric Thomas , Benjamin Roche
Scientific Reports, 2017, 7 (1), pp.11157. ⟨10.1038/s41598-017-11562-w⟩
Article dans une revue hal-01599465 v1

Modeling the spread of avian influenza viruses in aquatic reservoirs: A novel hydrodynamic approach applied to the Rhône delta (southern France)

Marion Vittecoq , Hermann Gauduin , Thibault Oudart , Olivier Bertrand , Benjamin Roche et al.
Science of the Total Environment, 2017, 595, pp.787-800. ⟨10.1016/j.scitotenv.2017.03.165⟩
Article dans une revue istex hal-02014545 v1

Disease ecology, health and the environment: a framework to account for ecological and socio-economic drivers in the control of neglected tropical diseases

Andres Garchitorena , S. Sokolow , Benjamin Roche , C. Ngonghala , M. Jocque et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2017, Conservation, biodiversity and infectious disease: scientific evidence and policy implications, 372 (1722), pp.20160128. ⟨10.1098/rstb.2016.0128⟩
Article dans une revue hal-02009862 v1

Might Interspecific Interactions between Pathogens Drive Host Evolution? The Case of Plasmodium Species and Duffy-Negativity in Human Populations

Benjamin Roche , Virginie Rougeron , Lluis Quintana-Murci , François Renaud , Jessica Lee Abbate et al.
Trends in Parasitology, 2017, 33 (1), pp.21-29. ⟨10.1016/j.pt.2016.09.010⟩
Article dans une revue istex hal-02013924 v1
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Consequences of insecticide resistance on malaria transmission

Haoues Alout , Benjamin Roche , Roch Kounbobr Dabiré , Anna Cohuet
PLoS Pathogens, 2017, 13 (9), pp.e1006499. ⟨10.1371/journal.ppat.1006499⟩
Article dans une revue hal-01942723 v1
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Infections and cancer: the "fifty shades of immunity" hypothesis

Camille Jacqueline , Aurélie Tasiemski , Gabriele Sorci , Beata Ujvari , Fatima Maachi et al.
BMC Cancer, 2017, 17 (1), pp.257. ⟨10.1186/s12885-017-3234-4⟩
Article dans une revue hal-01525777 v1
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Influence of predation on community resilience to disease

Farah Al-Shorbaji , Benjamin Roche , Robert Britton , Demetra Andreou , Rodolphe Gozlan
Journal of Animal Ecology, 2017, 86 (5), pp.1147-1158. ⟨10.1111/1365-2656.12722⟩
Article dans une revue hal-02005388 v1

Intrinsic versus Extrinsic Cancer Risks: The Debate Continues

Fréderic Thomas , Benjamin Roche , Beata Ujvari
Trends in Cancer, 2016, 2 (2), pp.68-69. ⟨10.1016/j.trecan.2016.01.004⟩
Article dans une revue hal-02515196 v1

Cancer and life-history traits: lessons from host–parasite interactions

Beata Ujvari , Christa Beckmann , Peter A Biro , Audrey Arnal , Aurélie Tasiemski et al.
Parasitology, 2016, 143 (5), pp.533-541. ⟨10.1017/S0031182016000147⟩
Article dans une revue hal-01278593 v1
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Third International Biannual Evolution and Cancer Conference (Evolutionary Trade-offs and Clinical Consequences) Meeting report. San Francisco, CA, USA. 10-13 December 2015

Benjamin Roche , Frédéric Thomas
Evolutionary Applications, 2016, 9 (3), pp.423-426. ⟨10.1111/eva.12359⟩
Article dans une revue hal-01284561 v1

Do cell-autonomous and non-cell-autonomous effects drive the structure of tumor ecosystems?

Tazzio Tissot , Beata Ujvari , Éric Solary , Patrice Lassus , Benjamin Roche et al.
Biochimica et Biophysica Acta (BBA) - Reviews on Cancer, 2016, 1865 (2), pp.147--54. ⟨10.1016/j.bbcan.2016.01.005⟩
Article dans une revue istex hal-02187344 v1

Host manipulation by cancer cells: Expectations, facts, and therapeutic implications

Tazzio Tissot , Audrey Arnal , Camille Jacqueline , Robert Poulin , Thierry Lefèvre et al.
BioEssays, 2016, 38 (3), pp.276-285. ⟨10.1002/bies.201500163⟩
Article dans une revue istex hal-01278160 v1

Evolutionary Ecology of Organs: A Missing Link in Cancer Development?

Fréderic Thomas , Randolph Nesse , Robert Gatenby , Cindy Gidoin , François Renaud et al.
Trends in Cancer, 2016, 2 (8), pp.409-415. ⟨10.1016/j.trecan.2016.06.009⟩
Article dans une revue hal-02515188 v1

The guardians of inherited oncogenic vulnerabilities

Audrey Arnal , Tazzio Tissot , Beata Ujvari , Leonard Nunney , Éric Solary et al.
Evolution - International Journal of Organic Evolution, 2016, 70 (1), pp.1-6. ⟨10.1111/evo.12809⟩
Article dans une revue istex hal-01239554 v1
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Imported chikungunya cases in an area newly colonised by Aedes albopictus : mathematical assessment of the best public health strategy

Thomas Sochacki , Frédéric Jourdain , Yvon Perrin , Harold Noel , Marie-Claire Paty et al.
Eurosurveillance, 2016, 21 (18), pp.4. ⟨10.2807/1560-7917⟩
Article dans une revue hal-01331088 v1
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Interactions between immune challenges and cancer cells proliferation: timing does matter!

Camille Jacqueline , Youssef Bourfia , Hassan Hbid , Gabriele Sorci , Frédéric Thomas et al.
Evolution, Medicine, and Public Health, 2016, 2016 (1), pp.299-311. ⟨10.1093/emph/eow025⟩
Article dans une revue hal-01381802 v1
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Cancer: an emergent property of disturbed resource-rich environments? Ecology meets personalized medicine

Hugo Ducasse , Audrey Arnal , Marion Vittecoq , Simon Daoust , Beata Ujvari et al.
Evolutionary Applications, 2015, 8 (6), pp.527-540. ⟨10.1111/eva.12232⟩
Article dans une revue hal-02502838 v1

Bad luck and cancer: Does evolution spin the wheel of fortune?

Benjamin Roche , Beata Ujvari , Fréderic Thomas
BioEssays, 2015, 37 (6), pp.586-587. ⟨10.1002/bies.201500012⟩
Article dans une revue istex hal-02515136 v1
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Metacommunity and phylogenetic structure determine wildlife and zoonotic infectious disease patterns in time and space

Gerardo Suzán , Gabriel García-Peña , Ivan Castro-Arellano , Oscar Rico , André Rubio et al.
Ecology and Evolution, 2015, 5 (4), pp.865-873. ⟨10.1002/ece3.1404⟩
Article dans une revue hal-02391093 v1
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Interdisciplinarity and Infectious Diseases: An Ebola Case Study

Vanessa O. Ezenwa , Anne-Hélène Prieur-Richard , Benjamin Roche , Xavier Bailly , Pierre Becquart et al.
PLoS Pathogens, 2015, 11 (8), pp.e1004992. ⟨10.1371/journal.ppat.1004992⟩
Article dans une revue hal-01223813 v1

Making the best of a bad situation: host partial resistance and bypass of behavioral manipulation by parasites?

Simon Daoust , Kayla C King , Jacques Brodeur , Bernard Roitberg , Benjamin Roche et al.
Trends in Parasitology, 2015, 31 (9), pp.413-418. ⟨10.1016/j.pt.2015.05.007⟩
Article dans une revue istex hal-02515154 v1

Animal behaviour and cancer

Marion Vittecoq , Hugo Ducasse , Audrey Arnal , Anders Pape Møller , Beata Ujvari et al.
Animal Behaviour, 2015, 101, pp.19-26. ⟨10.1016/j.anbehav.2014.12.001⟩
Article dans une revue istex hal-02513651 v1
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The Spread of Aedes albopictus in Metropolitan France: Contribution of Environmental Drivers and Human Activities and Predictions for a Near Future

Benjamin Roche , Lucas Léger , Grégory L 'Ambert , Guillaume Lacour , Rémi Foussadier et al.
PLoS ONE, 2015, 10 (5), pp.e0125600. ⟨10.1371/journal.pone.0125600⟩
Article dans une revue hal-01225092 v1
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Evolutionary perspective of cancer: myth, metaphors, and reality

Audrey Arnal , Beata Ujvari , Bernard Crespi , Robert Gatenby , Tazzio Tissot et al.
Evolutionary Applications, 2015, 8 (6), pp.541-544. ⟨10.1111/eva.12265⟩
Article dans une revue hal-02502595 v1
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Malaria continues to select for sickle cell trait in Central Africa

Eric Elguero , Lucrèce Délicat-Loembet , Virginie Rougeron , Céline Arnathau , Benjamin Roche et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (22), pp.7051-7054. ⟨10.1073/pnas.1505665112⟩
Article dans une revue hal-04943163 v1

Does the weather play a role in the spread of pandemic influenza ? A study of H1N1pdm09 infections in France during 2009-2010

Marion Vittecoq , Benjamin Roche , Jean-Marie Cohen , François Renaud , Frédéric Thomas et al.
Epidemiology and Infection, 2015, 143, 143 (16), pp.3384-3393. ⟨10.1017/S0950268815000941⟩
Article dans une revue hal-01215148 v1
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Can Peto’s paradox be used as the null hypothesis to identify the role of evolution in natural resistance to cancer? A critical review

Hugo Ducasse , Beata Ujvari , Eric Solary , Marion Vittecoq , Audrey Arnal et al.
BMC Cancer, 2015, 15, pp.792. ⟨10.1186/s12885-015-1782-z⟩
Article dans une revue hal-01258455 v1

Does host receptivity or host exposure drives dynamics of infectious diseases? The case of West Nile Virus in wild birds

Benjamin Roche , Serge Morand , Eric Elguero , Thomas Balenghien , Jean-François Guégan et al.
Infection, Genetics and Evolution, 2015, 33, pp.11-19. ⟨10.1016/j.meegid.2015.04.011⟩
Article dans une revue istex hal-02641481 v1
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The niche reduction approach: an opportunity for optimal control of infectious diseases in low-income countries?

Benjamin Roche , Hélène Broutin , Marc Choisy , Sylvain Godreuil , Guillaume Constantin de Magny et al.
BMC Public Health, 2014, 14 (1), pp.753. ⟨10.1186/1471-2458-14-753⟩
Article dans une revue pasteur-01053863 v1
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Applying ecological and evolutionary theory to cancer: a long and winding road

Frédéric Thomas , Daniel Fisher , Philippe Fort , Jean-Pierre Marie , Simon Daoust et al.
Evolutionary Applications, 2013, 6 (1), pp.1-10. ⟨10.1111/eva.12021⟩
Article dans une revue halsde-00790602 v1
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Peto's paradox revisited: theoretical evolutionary dynamics of cancer in wild populations

Benjamin Roche , Kathleen Sprouffske , Hassan Hbid , Dorothée Missé , Frédéric Thomas
Evolutionary Applications, 2013, 6 (1), pp.109-116. ⟨10.1111/eva.12025⟩
Article dans une revue hal-02504064 v1
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The Impact of Community Organization on Vector-Borne Pathogens

Benjamin Roche , Pejman Rohani , Andy Dobson , Jean-François Guégan
The American Naturalist, 2013, 181 (1), pp.1-11. ⟨10.1086/668591⟩
Article dans une revue hal-02391503 v1
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Identifying the Achilles heel of multi-host pathogens: the concept of keystone ‘host’ species illustrated by Mycobacterium ulcerans transmission

Benjamin Roche , M. Eric Benbow , Richard Merritt , Ryan Kimbirauskas , Mollie Mcintosh et al.
Environmental Research Letters, 2013, 8 (4), pp.045009. ⟨10.1088/1748-9326/8/4/045009⟩
Article dans une revue hal-02391319 v1

Cancer: a missing link in ecosystem functioning?

Marion Vittecoq , Benjamin Roche , Simon Payette Daoust , Hugo Ducasse , Dorothée Missé et al.
Trends in Ecology & Evolution, 2013, epub ahead of print. ⟨10.1016/j.tree.2013.07.005⟩
Article dans une revue istex hal-00856699 v1

Cat ownership is neither a strong predictor of Toxoplasma gondii infection nor a risk factor for brain cancer

Marion Vittecoq , Kevin Lafferty , Eric Elguero , Jacques Brodeur , Michel Gauthier-Clerc et al.
Biology Letters, 2012, 8 (6), pp.1042-1042. ⟨10.1098/rsbl.2012.0625⟩
Article dans une revue hal-02512128 v1
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Natural resistance to cancers: a Darwinian hypothesis to explain Peto’s paradox

Benjamin Roche , Michael Hochberg , Aleah F Caulin , Robert A. Gatenby , Carlo Maley et al.
BMC Cancer, 2012, 12, pp.387. ⟨10.1186/1471-2407-12-387⟩
Article dans une revue hal-02502607 v1
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Malignancies and High Birth Weight in Human: Which Cancers Could Result from Antagonistic Pleiotropy?

Fréderic Thomas , Eric Elguero , Jacques Brodeur , Benjamin Roche , Dorothée Missé et al.
Journal of Evolutionary Medicine, 2012, 1, pp.1-5. ⟨10.4303/jem/Q120502⟩
Article dans une revue hal-02513097 v1

Brain cancer mortality rates increase with Toxoplasma gondii seroprevalence in France

Marion Vittecoq , Eric Elguero , Kevin Lafferty , Benjamin Roche , Jacques Brodeur et al.
Infection, Genetics and Evolution, 2012, 12 (2), pp.496-498. ⟨10.1016/j.meegid.2012.01.013⟩
Article dans une revue istex hal-02512114 v1

Water-borne transmission drives avian influenza dynamics in wild birds: the case of the 2005-2006 epidemics in the Camargue area.

Benjamin Roche , Camille Lebarbenchon , Michel Gauthier-Clerc , Chung-Ming Chang , Frédéric Thomas et al.
Infection, Genetics and Evolution, 2009, 9 (5), pp.800-5. ⟨10.1016/j.meegid.2009.04.009⟩
Article dans une revue istex pasteur-00457555 v1
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Exploiting host compensatory responses: the ‘must’ of manipulation?

Thierry Lefèvre , Benjamin Roche , Robert Poulin , Hilary Hurd , François Renaud et al.
Trends in Parasitology, 2008, 24 (10), pp.435-439. ⟨10.1016/j.pt.2008.06.006⟩
Article dans une revue istex hal-02520005 v1
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Multi-agent systems in epidemiology: a first step for computational biology in the study of vector-borne disease transmission

Benjamin Roche , Jean-François Guégan , Francois Bousquet
BMC Bioinformatics, 2008, 9, pp.435. ⟨10.1186/1471-2105-9-435⟩
Article dans une revue hal-02392523 v1

Biodiversité et santé humaine : de la nécessité de combiner écologie et santé publique

Jean-François Guégan , Benjamin Roche , Serge Morand
Les conséquences écologiques et sociétales de la perte de biodiversité, ISTE Group, pp.257-285, 2024, ⟨10.51926/ISTE.9072.ch11⟩
Chapitre d'ouvrage hal-04581207 v1

Comment la biologie de la conservation peut-elle réduire le risque d'épidémies chez les populations humaines ?

Audrey Arnal , Benjamin Roche
Gardon, S. (ed.); Gautier, A. (ed.); Le Naour, G. (ed.); Morand, S. (ed.); Angot, J.L. (préf.); Keck, F. (postf.). Sortir des crises : One Health en pratiques, Quae, pp.48-51, 2022, 978-2-7592-3296-3
Chapitre d'ouvrage hal-05052243 v1

Optimizing public health strategies in low-income countries : epidemiology, ecology and evolution for the control of malaria

Eve Miguel , Florence Fournet , Rakiswendé Serge Yerbanga , Nicolas Moiroux , Franck Yao et al.
Ecology and evolution of infectious diseases : pathogen control and public health management in low-income countries., 2018, ⟨10.1093/oso/9780198789833.003.0016⟩
Chapitre d'ouvrage hal-02968232 v1

De novo evolution of transmissible tumors in Hydra

Sophie Tissot , Jordan Meliani , Justine Boutry , Lionel Brazier , Jácint Tökölyi et al.
Cancer Evolution: From Genome to Ecology, May 2024, Virtual conference, United Kingdom. , 2024
Poster de conférence hal-04618407 v1

Cancer’s vulnerability to food availability is evolutionarily conserved: diet modulates tumorigenesis in both Hydra and zebrafish

Sophie Tissot , Lena Guimard , Jordan Meliani , Justine Boutry , Antoine M Dujon et al.
Conférences Jacques Monod, Roscoff 2023, Oct 2023, Roscoff, France. 2023
Poster de conférence hal-04423415 v1

Prospective scientifique pour la recherche française sur la biodiversité - 2023

D. Couvet , A. Delavaud , J. Langridge , H. Soubelet , L. Abbadie et al.
Fondation pour la Recherche sur la Biodiversité, 50 p., 2023, 979-10-91015-66-0
Ouvrages hal-04637987 v1
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Separation of Concerns in Epidemiological Modelling

Thi-Mai-Anh Bui , Mikal Ziane , Serge Stinckwich , Tuong Vinh Ho , Benjamin Roche et al.
Modularity in Modelling (momo'16) - Workshop of the 15th International Conference on Modularity, Mar 2016, Malaga, Spain. pp.196-200, ⟨10.1145/2892664.2892699⟩
Communication dans un congrès hal-01377096 v1