- 19
- 10
- 10
- 9
- 5
- 4
- 4
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
Sorina POP
72
Documents
Researcher identifiers
- camarasu
- 0000-0002-7923-5069
- IdRef : 178745596
- ResearcherId : F-9601-2013
Presentation
1. Education
------------
- 2010 - 2013: PhD, Computer Science, INSA de Lyon, France. Thesis subject: Exploiting heterogeneous distributed systems for Monte-Carlo simulations in the medical field. Supervisors: H.Benoit-Cattin and T. Glatard.
- 2007 - 2008: Master of Science, Systems and Images, INSA de Lyon, France. Thesis subject: Optimisation of the distributed execution of a medical application on the Grid. Supervisor: D. Sarrut
- 2004 - 2007: Engineering degree, Telecommunications, INSA de Lyon, France.
2. Professional experience
--------------------------
- 2007 - present: CNRS research engineer at CREATIS laboratory, Lyon, France.
- 2010 - 2013: PhD Student, INSA de Lyon, France.
3. Research interests
---------------------
- Grid and Cloud computing
- Modeling and simulation of distributed application workflows and services
- Reproducibility of scientific results
- Interoperability among computing and storage platforms
- Data management
Publications
- 9
- 9
- 6
- 4
- 4
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 21
- 19
- 17
- 13
- 11
- 10
- 8
- 7
- 6
- 6
- 6
- 5
- 5
- 5
- 5
- 5
- 5
- 5
- 5
- 5
- 5
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 4
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 3
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 2
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 1
- 47
- 43
- 20
- 4
- 3
- 2
- 9
- 7
- 5
- 5
- 2
- 1
- 1
- 1
- 1
- 1
- 1
|
The Impact of Hardware Variability on Applications Packaged with Docker and Guix: a Case Study in NeuroimagingACM REP'24, ACM, Jun 2024, Rennes, France. ⟨10.1145/3641525.3663626⟩
Conference papers
hal-04480308v2
|
|
Reproducibility of Tumor Segmentation Outcomes with a Deep Learning ModelInternational Symposium on Biomedical Imaging (ISBI), Apr 2023, Cartagena de Indias, Colombia. ⟨10.1109/ISBI53787.2023.10230482⟩
Conference papers
hal-04006057v1
|
|
Computational Reproducibility in Metabolite Quantification Applied to Short Echo Time in Vivo MR Spectroscopy20th IEEE International Symposium on Biomedical Imaging, ISBI 2023, IEEE, Apr 2023, Cartagena de Indias, Colombia. ⟨10.1109/ISBI53787.2023.10230744⟩
Conference papers
hal-04006152v1
|
|
Projet ReproVIPJournée Reproductibilité Labex PRIMES, Dec 2022, Lyon, France
Conference papers
hal-04006460v1
|
|
Deploying container-based applications on EGI with VIPJCAD 2022 - Journées Calcul Données, Oct 2022, Dijon, France
Conference papers
hal-03975757v1
|
|
MSSEG-2: Un challenge d'imagerie médicale sur VIPJCAD 2021, Dec 2021, En ligne, France
Conference papers
hal-03708108v1
|
|
MSSEG-2: A medical imaging challenge on VIPEGI Conference 2021, Oct 2021, En ligne, France
Conference papers
hal-03708105v1
|
|
Open research: linking the bits and pieces with OpenAIRE-connectOHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-6
Conference papers
inserm-02151177v1
|
|
Exploiting GPUs on distributed infrastructures for medical imaging applications with VIP and DIRAC42nd international convention on information and communication technology, electronics and microelectronics, May 2019, Opatija, Croatia. pp.190-195, ⟨10.23919/mipro.2019.8757075⟩
Conference papers
hal-02327867v1
|
|
Enabling Large Scale Data Production for OpenDose with GATE on the EGI Infrastructure2019 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID), May 2019, Larnaca, France. pp.658-665, ⟨10.1109/CCGRID.2019.00084⟩
Conference papers
inserm-02869860v1
|
|
Open Science for the Neuroinformatics communityDI4R 2018 - Digital Infrastructures for Research, Oct 2018, Lisbon, Portugal. pp.1
Conference papers
inserm-01846994v1
|
|
Interoperability with Boutiques and CARMINDI4R 2018 - Digital Infrastructures for Research, Oct 2018, Lisbon, Portugal. pp.1
Conference papers
inserm-01846997v1
|
Evaluation through Realistic Simulations of File Replication Strategies for Large Heterogeneous Distributed SystemsEuropar 2018 - 24th International European Conference on Parallel and Distributed Computing ; Workshop HeteroPar 2018, Aug 2018, Turin, Italy. pp.409-420, ⟨10.1007/978-3-030-10549-5_32⟩
Conference papers
hal-01887369v1
|
|
|
FG-SOL : un nouveau service pour la préservation et la réutilisation des logiciels de la rechercheJRES (Journées réseaux de l'enseignement et de la recherche ) 2017, Renater, Nov 2017, Nantes, France
Conference papers
hal-04806283v2
|
Protocole de caractérisation d'antenne radiofréquence pour l'IRMSFRMBM, 2017, Bordeaux, France
Conference papers
hal-01905449v1
|
|
|
FG-Cloud : un service de cloud computing fédéré pour le calcul scientifiqueJournées Réseaux de l’Enseignement et de la Recherche.(JRES ) 2017, Nov 2017, Nantes, France
Conference papers
hal-02019194v1
|
|
Modeling Distributed Platforms from Application Traces for Realistic File Transfer Simulation17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing., May 2017, Madrid, Spain
Conference papers
hal-01452694v1
|
Challenge on Endocardial Three-dimensional Ultrasound Segmentation (CETUS)Challenge on Endocardial Three-dimensional Ultrasound Segmentation, Sep 2014, Boston, United States
Conference papers
hal-02048165v1
|
|
Simulating Application Workflows and Services Deployed on the European Grid Infrastructure13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing, May 2013, Delft, Netherlands. pp.18-25, ⟨10.1109/CCGrid.2013.13⟩
Conference papers
hal-00843917v1
|
|
CreaTools: A development framework for medical image processing software ; an application to segmentation, anomaly detection and quantification for coronary arteriesEuropean BioImage Analysis Symposium 2013, Oct 2013, Barcelone, Spain
Conference papers
hal-00921503v1
|
|
|
VIP et GateLab : retour d'expérienceJRES (Journées réseaux de l'enseignement et de la recherche ) 2013, Renater, Dec 2013, Montpellier, France
Conference papers
hal-04805091v1
|
CreaTools: applications and development framework for medical image-processing softwareISBI Workshop on Open Source Medical Image Analysis Software, Apr 2012, Barcelona, Spain
Conference papers
hal-00831272v1
|
|
|
Instance nationale et multi-communauté de DIRAC pour France Grillesjournées scientifiques mésocentres et France Grilles 2012, Oct 2012, Paris, France
Conference papers
hal-00766084v1
|
CreaTools: A Framework to Develop Medical Image Processing Software: Application to Simulate Pipeline Stent Deployment in Intracranial Vessels with AneurysmsInternational Conference on Computer Vision and Graphics, Sep 2012, Warsaw, Poland. pp.55-62, ⟨10.1007/978-3-642-33564-8_7⟩
Conference papers
hal-00829662v1
|
|
CreaTools: a framework to develop medical image processing software. Application to simulate pipeline stent deployment in intracranial vessels with aneurysmsInt. Conf. Comput. Vision. Graphics., Sep 2012, Warsaw, Poland. pp.55-62
Conference papers
hal-00842740v1
|
|
CreaTools: applications and development framework for medical image-processing software13th Libre Software Meeting, Jul 2012, Genève, Switzerland
Conference papers
hal-00831278v1
|
|
|
Multi-modality image simulation with the Virtual Imaging Platform: Illustration on cardiac echography and MRIIEEE International Symposium on Biomedical Imaging (ISBI), May 2012, Barcelona, Spain. pp.98-101, ⟨10.1109/ISBI.2012.6235493⟩
Conference papers
hal-00830243v1
|
|
Diffusion MRI Simulation with the Virtual Imaging Platformjournées scientifiques mésocentres et France Grilles 2012, Oct 2012, Paris, France
Conference papers
hal-00766081v1
|
|
Multi-infrastructure workflow execution for medical simulation in the Virtual Imaging PlatformHealthGrid 2011, Jun 2011, Bristol, United Kingdom. pp.1-10
Conference papers
hal-00677827v1
|
|
Le calcul distribué : un outil pour l'imagerie médicaleRencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France
Conference papers
hal-00653015v1
|
3D-liver quantitative perfusion mapping using EGEE grid with MR-DCE imaging and MS-325 blood pool contrast agentISMRM, 2011, Montreal, Canada. pp.2046
Conference papers
hal-01950479v1
|
|
3D-liver MR-DCE imaging for quantitative perfusion mapping using EGI gridColloque Recherche en Imagerie et Technologies pour la Santé (RITS), 2011, Rennes, France
Conference papers
hal-01950477v1
|
|
|
Multi-modality medical image simulation of biological models with the Virtual Imaging Platform (VIP)International Symposium on Computer-Based Medical Systems (CBMS), Jun 2011, Bristol, United Kingdom. pp.1-6, ⟨10.1109/cbms.2011.5999141⟩
Conference papers
hal-03813315v1
|
PBS proton treatment plan simulation with the GATE-Lab50th International PTCOG meeting (Particle Therapy Co-Operative Group), 2011, Philadelphia, US, Unknown Region
Conference papers
hal-01950478v1
|
|
|
Calcul distribué pour l'imagerie médicaleJRES (Journées réseaux de l'enseignement et de la recherche ) 2011, Renater, Nov 2011, Toulouse, France
Conference papers
hal-04804557v1
|
|
Infrastructure DIRAC pour les Communautés PluridisciplinairesRencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France
Conference papers
hal-00653025v1
|
Two experiments with application-level quality of service on the EGEE gridGMAC '10, Jun 2010, Washington, United States. pp.ISBN: 978-1-4503-0100-8, ⟨10.1145/1809029.1809031⟩
Conference papers
hal-00622791v1
|
|
Optimization of Mean-Shift scale parameters on the EGEE gridStudies in health technology and informatics, Proceedings of Healthgrid 2010, 2010, Unknown, Unknown Region. pp.203-214, ⟨10.3233/978-1-60750-583-9-203⟩
Conference papers
hal-01871246v1
|
|
Overview of Medical Data Management Solutions for Research CommunitiesCluster, Cloud and Grid Computing (CCGrid), 2010 10th IEEE/ACM International Conference on, 2010, Unknown, Unknown Region. pp.739--744
Conference papers
hal-01792367v1
|
|
|
Towards Production-level Cardiac Image Analysis with GridsHealthGrid 2009, Jun 2009, Berlin, Germany. pp.31-40, ⟨10.3233/978-1-60750-027-8-31⟩
Conference papers
hal-00677800v1
|
Modelling pilot-job applications on production grids7th international workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms (Heteropar 09), 2009, Delft, The, Netherlands
Conference papers
hal-01950483v1
|
|
A comparison between ARC and gLite for medical image processing on Grids2nd workshop on Medical imaging on GRID, HPC and GPU infrastructures: achievements and perspectives (MICCAI-Grid), 2009, London, UK, Unknown Region
Conference papers
hal-01950482v1
|
|
Grids for Content-Based Medical Image Indexing and RetrievalICT4Health, Oncomedia, 2008, Manila, The, Philippines
Conference papers
hal-01950484v1
|
|
Towards a Virtual Radiological Platform Based on a Grid InfrastructureMedical imaging on grids: achievements and perspectives (MICCAI Grid Workshop), 2008, New York, USA, Unknown Region. pp.85-95
Conference papers
hal-01922371v1
|
|
ReproVIP: Enhancing Reproducibility of Scientific Results in Medical ImagingEGI Conference 2022, Sep 2022, Prague, France
Conference poster
hal-03789321v1
|
|
Deploying container-based applications on EGI with VIPEGI2022 - EGI conference, Sep 2022, Prague, Czech Republic. pp.1-1
Conference poster
hal-03792703v1
|
|
Protocole de caractérisation et de comparaison des SNR et volume de sensibilité des bobines en IRMJournées RMN du Grand Sud, Jul 2021, Clermont-Ferrand, France
Conference poster
hal-03589555v1
|
PROTOCOLE DE CARACTERISATION DE CAPTEUR IRMRecherche en Imagerie et Technologies pour la Santé (RITS) 2017, Mar 2017, Lyon, France
Conference poster
hal-01505478v1
|
|
SNR and volume characterization of RF coils: A simple procedure and an automatic post-processing tool for a straightforward comparison25th annual meeting & exhibition ISMRBM, Apr 2017, Honolulu, United States. pp.Abstract #3830, 2017
Conference poster
hal-01693554v1
|
|
Protocole de caractérisation d'antenne radiofréquence pour l'IRM3ème Congrès de la SFRMBM, Mar 2017, Bordeaux, France
Conference poster
hal-01560556v1
|
|
|
FG-Cloud : un service de cloud computing fédéré pour le calcul scientifiqueJRES (Journées réseaux de l'enseignement et de la recherche ) 2017, Nov 2017, Nantes, France. 2017
Conference poster
hal-04806299v1
|
|
Research software servicesEGI 2017, May 2017, Catania, Italy. , 2017, ⟨10.5281/zenodo.1405606⟩
Conference poster
hal-01806908v1
|
|
ReproVIP Report associated to Reproducibility Dashboard (D1.1.2) and CI platform (D 1.2.1)CREATIS Université Lyon 1. 2024
Reports
hal-04551781v1
|
|
ReproVIP Report #2.1.1 Application Deployment StrategiesCREATIS Université Lyon 1. 2024
Reports
hal-04551771v1
|
|
ReproVIP Report #1.1.1 Selected Metrics and Reproducibility ResultsCREATIS Université Lyon 1. 2023
Reports
hal-04045178v1
|
|
2012 Activity Report of the Regional Research Programme on Hadrontherapy for the ETOILE Center[Research Report] Centre Etoile; Université Lyon 1 - Claude Bernard. 2013
Reports
hal-00840163v1
|
|
Exploiting Heterogeneous Distributed Systems for Monte-Carlo Simulations in the Medical FieldMedical Imaging. INSA de Lyon, 2013. English. ⟨NNT : 2013ISAL0114⟩
Theses
tel-01015270v1
|
|
Computational Reproducibility3rd cycle. 12th SLEIGHT Science Event, Saint Etienne (FR), France. 2024
Lectures
hal-04649287v1
|