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Christian Tamburini

Christian Tamburini Directeur de Recherche CNRS Océanographe microbien de l'océan profond Délégué scientifique CNRS/INSU DIIRO/OA (DAS en charge des développements instrumentaux innovants pour la recherche et l’observation et DAS Océan-Atmosphère)
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  • IdHAL christiantamburini
  • ResearcherId : I-7821-2012
  • ORCID 0000-0003-3752-7423
  • Google Scholar : https://scholar.google.nl/citations?user=LNVxm1UAAAAJ&hl=fr
  • IdRef : 069965625
  • ResearcherId : http://www.researcherid.com/rid/I-7821-2012

Presentation

Directeur de Recherche (DR2) au CNRS à l'Institut Méditerranéen d'Océanologie ([MIO](https://www.mio.osupytheas.fr/), CNRS/AMU/IRD/UTLN), situé sur le campus de Luminy ([Aix-Marseille Université](https://www.univ-amu.fr/)) au sein de l'[OSU PYTHEAS](https://www.osupytheas.fr/). Situation: utilisez google map pour voir où le [MIO](https://www.google.com/maps/place/MIO+-+Institut+M%C3%A9diterran%C3%A9en+d%27Oc%C3%A9anologie/@43.2339508,5.4374518,16.28z/data=%214m2%213m1%211s0x12c9b9abe79308a5:0xd145d9d3fafafaf1) est situé **√ Intéréts scientifiques** **Océanographie microbienne des domaines océaniques intermédiaire (200-1000m) et profond (&gt;1000m)** Effets de la pression hydrostatique sur les activités et la diversité des organismes microbiens **Pompe biologique de carbone :** \--&gt; rôle des procaryotes dans le devenir de la matière organique en zones intermédiaire et profonde en lien avec le cycle du carbone \--&gt; Dégradation de la matière organique semi-labile ou réfractaire **Bioluminescence :** \--&gt; la bioluminescence appliquée à l'architecture : optimisation de culture de bactéries bioluminescentes (collaboration avec Tangram Lab Architectes) \--&gt; la bioluminescence comme un proxy de l'activité biologique en milieu marin. Impact de la bioluminescence sur la pompe biologique de carbone. **√ Approches et outils** Expériences en laboratoire : culture bactérienne en conditions hyperbares. Simulation de chute de particules. Expériences sur le terrain (prélèvement d'échantillons d'eaux profondes avec maintien des conditions de pression) Rôle des bactéries attachées aux particules en cours de chute Structure phylogénitique des assemblages microbiens révélée par les techniques de biologie moléculaire Changements de la structure de la communauté des procaryotes soumise à un accroissement de la pression hydrostatique. **√ Campagnes océanographiques** Plus de 340 jours de missions en mer dont les principales missions sont listées ci-dessous : **BICOSE 2** (Biodiversité, Interractions, COnnectivité et Symbioses en milieus Extrêmes). N/O Pourquoi Pas / Sous-marin Nautile, Janvier – Mars 2018, 44 jours, ride médio-Atlantique (sources hydrothermales TAG et Snake Pit). 1ère plongée avec le sous-marin Nautile. **PEACETIME** (ProcEss studies at the Air-sEa Interface after dust deposition in the MEditerranean sea). N/O Pourquoi Pas, Mai – Juin 2017, 32 jours, Mer Méditerranée) **PAP cruises**, RRS Discovery (GB), Atlantique Nord (Juillet – Août 2009, 37 jours et Juin – Juillet 2015, 20 jours). Projet EuroSITES (FP7, EU), ANR POTES, OT MED ROBIN. **Domino Development Corrosion Study**, N/O OGS EXPLORA, Mer Noire (Mars 2014, 15 jours). Contrat FOSPA. Responsable scientifique. **CASCADE**, N/O L’Atalante (F), Golfe du Lion (Mai 2011, 30 jours). Programme MERMEX **POTESmer**, N/O Tethys II, N/O L’Europe (F), Mer Ligure (Avril 2007, Avril 2008, 20 jours). Chef de mission. ANR POTES. **CIESM-Sub cruises**, N/O Urania, N/O Universitatis (I), Mer Tyrrhénienne (Juillet / Décembre 2005, 30 jours). CIESM program, ANR POTES. **BioDeep cruises**, N/O Urania (I), Mer Ionienne (Août 2011, 14 jours). Projets EU FP5 BioDeep. **MedFlux cruises**, R/V Endeavor (US), Mer Ligure (Mars 2005, Avril 2006, 14 jours). Projet NSF MedFlux. **NOCTILUC 1 et 2**, N/O Thetys II, Mer Ligure – ANTARES (Avril et Sept. 2004). Projet ANTARES – Bioluminescence, co-Chef de mission. **√ Implications administratives et responsabilités** **Chargé de mission institut (CMI)** – CNRS/INSU (Direction Adjointe Scientifique de l’INSU en charge des développements instrumentaux innovants pour la recherche et l’observation – DIIRO). Depuis Janvier 2021. **Membre du bureau du GDR OMER** (GDR Océan &amp; Mers). Depuis Janvier 2021. **Membre nommé à la Commission Spécialisée Océan-Atmosphère de l’INSU** (CSOA) (2014 - 2020). **Responsable ‘boîte instrumentation’** CSOA (2016-2020). Organisation des ‘Atelier Expérimentation et Instrumentation’ de Brest (AEI 2017) et de Lille (AEI 2019). **Membre nommé à l’Ecole Doctorales des Sciences de l’Environnement** (ED 251 – Aix-Marseille Université) (2018 - ) Membre nommé au conseil scientifique d’évaluation (CES01) de l’Agence Nationale de la Recherche (ANR) (2014-2016). **Membre élu Conseil Scientifique de l'INSU** (2012 - 2014) **Membre élu Section 19 CoNRS** (2009 - 2012) Membre Advisory Board of the Hadal Science and Technology Research Center (HAST), Shangai Ocean university (2015 - 2018) Jury de concours MCF Pierre et Marie Curie, Paris VI (2012), Chaire d’Excellence Pierre et Marie Curie, Paris VI (2012) Membre AERES/HCERES pour l’évaluation du laboratoire EPOC – Mai 2010 **Responsable de l'Axe Transverse** 'Environnements méso-, bathypélagique et extrêmes’ au MIO (2012 - 2017) **Responsable de l'Axe Transverse** ‘Pompe Biologique’ au MIO (2018- ) Co-responsable et responsable du Personnel du ‘Service Atmosphère Mer’ (SAM) du MIO (2012 - 2016) Membre élu (collège B) du Conseil de l’OSU PYTHEAS (2013 – 2014) Membre du COMEX du MIO (2012 - ) **WP leader Earth-Sea Sciences du consortium ANTARES** (2008-2014). Représentant INSU. Membre élu du Conseil Scientifique du Centre d'Océanologie de Marseille (2003 - 2009) **√ Valorisation - développement d'instruments scientifiques** **HPSU** – High-pressure sampler unit. Suite au développement de Bianchi et al. (1999), j’ai eu tâche de développer un savoir-faire de méthodes de prélèvement d’eau de mer en maintenant les conditions in situ (pression, température oxygène) avec prise en compte optimale des conditions de sécurité et de concevoir une version commercialisable (Top Industrie SAS) en étroite collaboration avec M. Garel (IE, MIO) (Garel et al. 2019). **BathyBot** – the deep-sea crawler to see the unseen of the NW Mediterranean Sea. BathyBot, a multi-instrumented Internet Operated Vehicle (IOV), will be deployed at 2500m depth at 40 km off Toulon in the framework of EMSO ERIC infrastructural initiatives. Conception : iSeaMC (Bremen). Coordination technique : DT INSU (Carl Gojak) ; Coordination scientifique : C. Tamburini / S. Martini. <https://twitter.com/bathybot> **SINPAS** – SINking PArticles Simulator. Conception d’un système permettant d’étudier le rôle des prokaryotes dans la dégradation de particules en simulant leur chute le long de la colonne d’eau (Tamburini et al. 2010). **HP-O2** – Mesure de l’oxygène en condition hyperbare. Avec M. Garel (IE, MIO), nous avons développé un système permettant la mesure de l’oxygène sous pression (système optode). **MIO-HPLab** – Conteneur mobile hyperbare co-conçu avec M. Garel (IE, MIO) pour réaliser les expérimentations hyperbares sur navires océanographiques.
I am working as a **[CNRS](http://www.cnrs.fr/)** senior scientist (DR2) at the Mediterranean Institute of Oceanography (**[MIO](http://mio.pytheas.univ-amu.fr/)**, CNRS/AMU/IRD/UTLN), at the Luminy Campus within the [**OSU PYTHEAS**](https://www.osupytheas.fr/) (**[Aix-Marseille Université](http://www.univ-amu.fr/fr/universite)****)**. I am a microbial deep-sea oceanographer who study activity and diversity of meso- and bathypelagic prokaryotes, taking into account in situ high-pressure conditions (leading the MIO HP-Lab). I am interested in understanding the processes influencing the biological carbon pump, in particular the role of prokaryotes into the degradation of organic matter in the water column. I currently use in situ and lab experiments under high hydrostatic pressure to understand the effect of pressure on microbes. Another major goal is to explore the importance of bioluminescence in the deep sea. How to join us? use [google map](https://www.google.com/maps/place/MIO+-+Institut+M%C3%A9diterran%C3%A9en+d%27Oc%C3%A9anologie/@43.2339508,5.4374518,16.28z/data=%214m2%213m1%211s0x12c9b9abe79308a5:0xd145d9d3fafafaf1) **RESEARCH INTERESTS** · Deep-sea microbial oceanography · Biogeochemical implications of deep-sea prokaryotes in the biological carbon pump · Prokaryotic activity and diversity in the dark ocean · High-pressure effects on microbial activities and diversity · Bioluminescence shunt hypothesis: links between bioluminescence and biological carbon pump **RESEARCH EXPEDITIONS** More than 340 days of research expeditions at sea. Among them: · **APERO cruise**. https://www.aperocruise.fr/. Chef de mission à bord du N/O Le Pourquoi Pas. Co-PI projet ANR APERO avec L. Memery (LEMAR) and Lionel Guidi (LOV).. Le projet APERO (Assessing marine biogenic matter Production, Export and Remineralization: from the surface to the dark Ocean) a mobilisé 60 personnels embarqués à bord du N/O Le Pourquoi et le N/O Le Thalassa et presqu’autant à terre. 42 jours de mer. Voir aussi https://twitter.com/apero_cruise · **EMSO-LO / BathyCruise**. https://www.mio.osupytheas.fr/fr/mers-et-oceans-changement-global/emso-lo-bathycruise. Mise à l’eau de BathyBot, BathyReef, Biocam, Sismomètre, Radiomètre et Boîte de Jonction Scientifique. 31 janvier au 14 février 2022. N/O Pourquoi Pas / Sous-marin Nautile. Responsable scientifique avec S. Martini du projet BathyBot. 15 jours de mer. Voir https://twitter.com/bathybot et reportage CNRS Images: https://images.cnrs.fr/reportage-photo/rep001068 · **BICOSE 2** (Biodiversité, Interractions, COnnectivité et Symbioses en milieus Extrêmes). N/O Pourquoi Pas / Nautile crewed submersible, January – March 2018, 44 days, mid-Atlantic ridge (TAG &amp; Snake Pit hydrothermal vents). 1st dive with the crewed submersible Nautile · **PEACETIME** (ProcEss studies at the Air-sEa Interface after dust deposition in the MEditerranean sea). N/O Pourquoi Pas, May – June 2017, 32 days, Mediterranean Sea) · **PAP cruise**, RRS Discovery (GB), NE Atlantic (July – August 2009, 37 days / June – July 2015, 20 days). Project EuroSITES (FP7, EU), ANR POTES, OT-Med Robin · **Domino Development Corrosion Study,** N/O OGS EXPLORA, Black Sea (March 2014, 15 days). Contrat FOSPA. · **CASCADE** **cruise**, N/O L’Atalante (F), Gulf of Lion (May 2011, 30 days). MERMEX program. · **PAP cruise**, RRS Discovery (GB), North Atlantic (July – August 2009, 37 days). FP7 EU EuroSITES program, ANR POTES program. · **PotesMer cruises**, N/O Tethys II, N/O L’Europe (F), Ligurian Sea (April 2007, 2008, 20 days) **led as Chief Scientist**. ANR POTES program. **RECENT RESEARCH PROJECTS** · **APERO** (Assessing marine biogenic matter Production, Export and Remineralisation : from the surface to the dark Ocean, https://www.aperocruise.fr/. ). 2022-2026. PI: L. Memmery (LEMAR). Co-PIs: C. Tamburini (MIO), L. Guidi (LOV). Cruise in 2023 with 2 research vessels N/O Pourquoi Pas? (Chief Scientist: C. Tamburini) / N/O La Thalassa (Chief Scientist: L. Guidi). · **BathyBot –** The **Bathy**pelagic ro**Bot** (crawler) to see the unsee of the Mediterranean Sea CNRS Moyen Mi-Lourd CNRS-INSU. PI, 80 k€, 2017. High-sensitivity camera for the benthic deep-sea crawler ROBOT EMSO/ANTARES. Co-funding for an EU-Region Sud FEDER NUMerEnv (250 k€). Co-PI: S. Martini. [https://twitter.com/bathybot](https://twitter.com/bathybot "Compte Twitter") · **BathyReef - Deep-sea colonizer** designed for BathyBot at the EMSO-ANTARES site. TANGRAM-Architectes-VICAT grant. 150 k€, 2019. · **CENSOR – CaptEur de biolumiNescence haute Sensibilité dans l’Océan obscur.** Funded by CNRS DEFI Instrumentation aux limites 2017. PI, 15 k€. PI: S. Martini, co-PI · **Labex OT MED – ROBIN** (Remineralization of organic particles in presence of ballast minerals), **Coordinateur** (co-PI F. Le Moigne, GEOMAR), 2015 – 2016, 110 k€ (including 2-years of post-doc position). · **ANR POTES**, Pressure effects On marine prokaryoTES (Agence Nationale de la Recherche – [ANR POTES](http://www.com.univ-mrs.fr/LMGEM/potes/) - ANR-05-BLAN-0161-01). PI: 2005 – 2009 (350 K€) · **AAMIS**, Around Antares : Multidisciplinarity Integrated Sciences (fonds d'intervention de l'Université de la Méditerranée), PI : 2009 – 2010 (170 K€) · **ANTARES program** (Astronomy with a Neutrino Telescope and Abyss environmental RESearch). Implications: bioluminescence and deep oceanographic observatory. WP leader of Sea &amp; Earth Sciences in the ANTARES collaboration since 2008 · **EuroSITES** (FP7 Collaborative Project which aims to form an integrated European network of 9 deep-ocean (&gt;1000m) observatories). 2008-2011. Local Pi for LMGEM (240 K€) · **SINPAS**, SINking PArticles Simulation (PROOF program), Pi : 2004-2005 (25 K€)

Publications

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A novel method to sample individual marine snow particles for downstream molecular analyses

Chloé M.J. Baumas , Fatima‐ezzahra Ababou , Marc Garel , Mina Bizic , Danny Ionescu
Limnology and Oceanography: Methods, 2024, 22, pp.34-46. ⟨10.1002/lom3.10590⟩
Journal articles hal-04285160v1
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Adaptation Strategies to High Hydrostatic Pressures in Pseudothermotoga species Revealed by Transcriptional Analyses

Romain Fenouil , Nathalie Pradel , Hassiba Belahbib , Marie Roumagnac , Manon Bartoli
Microorganisms, 2023, 11 (3), pp.773. ⟨10.3390/microorganisms11030773⟩
Journal articles hal-04037893v1
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Reconstructing the ocean's mesopelagic zone carbon budget: sensitivity and estimation of parameters associated with prokaryotic remineralization

Chloé Baumas , Robin Fuchs , Marc Garel , Jean-Christophe Poggiale , Laurent Memery
Biogeosciences, 2023, 20 (19), pp.4165-4182. ⟨10.5194/BG-20-4165-2023⟩
Journal articles hal-04245254v1
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A RUpture‐Based detection method for the Active mesopeLagIc Zone (RUBALIZ): A crucial step toward rigorous carbon budget assessments

Robin Fuchs , Chloé M J Baumas , Marc Garel , David Nerini , Frédéric a C Le Moigne
Limnology and Oceanography: Methods, 2022, ⟨10.1002/lom3.10520⟩
Journal articles hal-03833918v1
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Organic additive release from plastic to seawater is lower under deep-sea conditions

Vincent Fauvelle , Marc Garel , Christian Tamburini , D. Nerini , Javier Castro-Jiménez
Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-24738-w⟩
Journal articles hal-03293644v1
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Contrasting degradation rates of natural dissolved organic carbon by deep-sea prokaryotes under stratified water masses and deep-water convection conditions in the NW Mediterranean Sea

Marc Garel , Christos Panagiotopoulos , Mehdi Boutrif , Daniel Repeta , Richard Sempere
Marine Chemistry, 2021, 231, pp.103932. ⟨10.1016/j.marchem.2021.103932⟩
Journal articles hal-03159104v1
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Glutamate optimizes enzymatic activity under high hydrostatic pressure in Desulfovibrio species: effects on the ubiquitous thioredoxin system

Hélène Gaussier , M. Nouailler , Edouard Champaud , Edwige Garcin , Sebban -Kreuzer
Extremophiles, 2021, 25, pp.385-392. ⟨10.1007/s00792-021-01236-x⟩
Journal articles hal-03272295v1
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On the barium–oxygen consumption relationship in the Mediterranean Sea: implications for mesopelagic marine snow remineralization

Stéphanie Jacquet , Dominique Lefèvre , Christian Tamburini , Marc Garel , Frédéric A.C. Le Moigne
Biogeosciences, 2021, 18 (6), pp.2205-2212. ⟨10.5194/bg-18-2205-2021⟩
Journal articles hal-03357294v1
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Hydrothermal plumes as hotspots for deep-ocean heterotrophic microbial biomass production

Cécile Cathalot , Erwan Roussel , Antoine Perhirin , Vanessa Creff , Jean-Pierre Donval
Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-26877-6⟩
Journal articles hal-03456814v1
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Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation

Christian Tamburini , Marc Garel , Aude Barani , Dominique Boeuf , Patricia Bonin
Water, 2021, 13 (19), pp.2616. ⟨10.3390/w13192616⟩
Journal articles hal-03356668v1
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Spatial patterns of ectoenzymatic kinetics in relation to biogeochemical properties in the Mediterranean Sea and the concentration of the fluorogenic substrate used

France van Wambeke , Elvira Pulido-Villena , Philippe Catala , Julie Dinasquet , Kahina Djaoudi
Biogeosciences, 2021, 18 (7), pp.2301-2323. ⟨10.5194/bg-18-2301-2021⟩
Journal articles hal-03195714v1
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Mesopelagic microbial carbon production correlates with diversity across different marine particle fractions

Chloé Baumas , Frédéric Le Moigne , Marc Garel , Nagib Bhairy , Sophie Guasco
The International Society of Microbiologial Ecology Journal, 2021, ⟨10.1038/s41396-020-00880-z⟩
Journal articles hal-03113293v1
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Responses to the Hydrostatic Pressure of Surface and Subsurface Strains of Pseudothermotoga elfii Revealing the Piezophilic Nature of the Strain Originating From an Oil-Producing Well

Marie Roumagnac , Nathalie Pradel , Manon Bartoli , Marc Garel , Aaron Jones
Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.588771⟩
Journal articles hal-03152104v1
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Reviews and syntheses: Bacterial bioluminescence – ecology and impact in the biological carbon pump

Lisa Tanet , Severine Martini , Laurie Casalot , Christian Tamburini
Biogeosciences, 2020, 17 (14), pp.3757-3778. ⟨10.5194/bg-17-3757-2020⟩
Journal articles hal-02901948v1
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A novel Thermotoga strain TFO isolated from a Californian petroleum reservoir phylogenetically related to Thermotoga petrophila and T. naphthophila, two thermophilic anaerobic isolates from a Japanese reservoir: Taxonomic and genomic considerations

Zara M Summers , Hassiba Belahbib , Nathalie Pradel , Manon Bartoli , Pooja Mishra
Systematic and Applied Microbiology, 2020, 43 (6), pp.126132. ⟨10.1016/j.syapm.2020.126132⟩
Journal articles hal-03007670v1
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Towards Integrating Evolution, Metabolism, and Climate Change Studies of Marine Ecosystems

Federico Baltar , Barbara Bayer , Nina Bednarsek , Stacy Deppeler , Ruben Escribano
Trends in Ecology & Evolution, 2019, 34 (11), pp.1022-1033. ⟨10.1016/J.TREE.2019.07.003⟩
Journal articles hal-02989907v1

New High-Tech Flexible Networks for the Monitoring of Deep-Sea Ecosystems

Jacopo Aguzzi , Damianos Chatzievangelou , Simone Marini , Emanuela Fanelli , Roberto Danovaro
Environmental Science and Technology, 2019, 53 (12), pp.6616-6631. ⟨10.1021/acs.est.9b00409⟩
Journal articles hal-02292665v1
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Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions

Marc Garel , Patricia Bonin , Severine Martini , Sophie Guasco , Marie Roumagnac
Frontiers in Microbiology, 2019, 10, pp.453. ⟨10.3389/fmicb.2019.00453⟩
Journal articles hal-02094373v1
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Hydrostatic Pressure Helps to Cultivate an Original Anaerobic Bacterium From the Atlantis Massif Subseafloor (IODP Expedition 357): Petrocella atlantisensis gen. nov. sp. nov.

Marianne Quéméneur , Gaël Erauso , Eléonore E Frouin , Emna Zeghal , Céline Vandecasteele
Frontiers in Microbiology, 2019, 10, pp.1497. ⟨10.3389/fmicb.2019.01497⟩
Journal articles hal-02297216v1
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Bacterial Bioluminescence: Light Emission in Photobacterium phosphoreum Is Not Under Quorum-Sensing Control

Lisa Tanet , Christian Tamburini , Chloé Baumas , Marc Garel , Gwenola Simon
Frontiers in Microbiology, 2019, 10, ⟨10.3389/fmicb.2019.00365⟩
Journal articles hal-02055577v1
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Towards a congruent reclassification and nomenclature of the thermophilic species of the genus Pseudothermotoga within the order Thermotogales

Hassiba Belahbib , Zarath Summers , Marie-Laure Fardeau , Manon Joseph , Christian Tamburini
Systematic and Applied Microbiology, 2018, 41 (6), pp.555-563. ⟨10.1016/J.SYAPM.2018.04.007⟩
Journal articles hal-01975970v1
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Biodegradation of Emiliania huxleyi aggregates by a natural Mediterranean prokaryotic community under increasing hydrostatic pressure

Virginie Riou , Julien Para , Marc Garel , Catherine Guigue , Badr Al Ali
Progress in Oceanography, 2018, 163, pp.271-281. ⟨10.1016/j.pocean.2017.01.005⟩
Journal articles hal-01975994v1
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Deep sediment resuspension and thick nepheloid layer generation by open-ocean convection

Xavier Durrieu de Madron , S. Ramondenc , L. Berline , Loïc Houpert , Anthony Bosse
J.Geophys.Res.Oceans, 2017, 122 (3), pp.2291-2318. ⟨10.1002/2016jc012062⟩
Journal articles in2p3-01489691v1
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Stacked search for time shifted high energy neutrinos from gamma ray bursts with the Antares neutrino telescope

S. Adrián-Martínez , A. Albert , M. Andre , M. Anghinolfi , G. Anton
European Physical Journal C: Particles and Fields, 2017, C77 (1), pp.20. ⟨10.1140/epjc/s10052-016-4496-8⟩
Journal articles hal-01621701v1
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Impact of an intense water column mixing (0-1500 m) on prokaryotic diversity and activities during an open-ocean convection event in the NW Mediterranean Sea

Tatiana Severin , Caroline Sauret , Mehdi Boutrif , Thomas Duhaut , Fayçal Kessouri
Environmental Microbiology, 2016, 18 (12), pp.4378 - 4390. ⟨10.1111/1462-2920.13324⟩
Journal articles hal-01480373v1

Genomic and physiological analysis reveals versatile metabolic capacity of deep-sea Photobacterium phosphoreum ANT-2200.

Sheng-Da Zhang , Claire-Lise Santini , Wei-Jia Zhang , Valérie Barbe , Sophie Mangenot
Extremophiles life under extreme conditions, 2016, 20 (3), pp.301-10. ⟨10.1007/s00792-016-0822-1⟩
Journal articles hal-01410136v1

Deciphering the adaptation strategies of Desulfovibrio piezophilus to hydrostatic pressure through metabolic and transcriptional analyses.

Amira Amrani , Jacques van Helden , Aurélie Bergon , Aicha Aouane , Wajdi Ben Hania
Environmental Microbiology Reports, 2016, 8 (4), pp.520-6. ⟨10.1111/1758-2229.12427⟩
Journal articles hal-01410149v1

Optical and X-ray early follow-up of ANTARES neutrino alerts

S. Adrián-Martínez , M. Ageron , A. Albert , Imen Al Samarai , M. André
Journal of Cosmology and Astroparticle Physics, 2016, 02 (2), pp.062. ⟨10.1088/1475-7516/2016/02/062⟩
Journal articles hal-01441181v1

Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey

Severine Martini , Valerie Michotey , Laurie Casalot , Patricia Bonin , Sophie Guasco
Deep Sea Research, 2016, 116, pp.33-40. ⟨10.1016/j.dsr.2016.07.014⟩
Journal articles hal-01408722v1
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Environmental microbiology as a mosaic of explored ecosystems and issues

Denis Faure , Patricia Bonin , Robert Duran , Pierre Amato , Florence Arsene-Ploetze
Environmental Science and Pollution Research, 2015, 22 (18), pp.13577-13598. ⟨10.1007/s11356-015-5164-5⟩
Journal articles hal-01247096v1

A search for time dependent neutrino emission from microquasars with the ANTARES telescope

S. Adrián-Martínez , A. Albert , M. André , M. Anghinolfi , G. Anton
Journal of High Energy Astrophysics, 2014, 3-4, pp.9-17. ⟨10.1016/j.jheap.2014.06.002⟩
Journal articles in2p3-01071564v1
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Relation between deep bioluminescence and oceanographic variables: A statistical analysis using time–frequency decompositions

S. Martini , David Nerini , Christian Tamburini
Progress in Oceanography, 2014, 127, pp.117-128. ⟨10.1016/j.pocean.2014.07.003⟩
Journal articles hal-01076992v1

Reconciliation of the carbon budget in the ocean’s twilight zone

Sarah L. C. Giering , Richard Sanders , Richard S. Lampitt , Thomas R. Anderson , Christian Tamburini
Nature, 2014, 507 (7493), pp.480-483. ⟨10.1038/nature13123⟩
Journal articles hal-01077017v1

Constraining the neutrino emission of gravitationally lensed Flat-Spectrum Radio Quasars with ANTARES data

S. Adrián-Martínez , A. Albert , M. Andre , G. Anton , M. Ardid
JOURNAL OF COSMOLOGY AND ASTROPARTICLE PHYSICS, 2014, 11, ⟨10.1088/1475-7516/2014/11/017⟩
Journal articles hal-01441852v1
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Transcriptomics Reveal Several Gene Expression Patterns in the Piezophile Desulfovibrio hydrothermalis in Response to Hydrostatic Pressure

Amira Amrani , Aurélie Bergon , Hélène Holota , Christian Tamburini , Marc Garel
PLoS ONE, 2014, 9 (9), pp.e106831. ⟨10.1371/journal.pone.0106831⟩
Journal articles hal-01628348v1
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Long-term monitoring programme of the hydrological variability in the Mediterranean Sea: a first overview of the HYDROCHANGES network

K. Schroeder , C. Millot , L. Bengara , S. Ben Ismail , M. Bensi
Ocean Science, 2013, 9 (2), pp.301-324. ⟨10.5194/os-9-301-2013⟩
Journal articles hal-03191372v1
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Effects of Hydrostatic Pressure on Growth and Luminescence of a Moderately-Piezophilic Luminous Bacteria Photobacterium phosphoreum ANT-2200

Severine Martini , Badr Al Ali , Marc Garel , David Nerini , Vincent Grossi
PLoS ONE, 2013, 8 (6), pp.e66580. ⟨10.1371/journal.pone.0066580⟩
Journal articles hal-01988033v1
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Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface

Christian Tamburini , Miquel Canals , Xavier Durrieu de Madron , Loïc Houpert , Dominique Lefèvre
PLoS ONE, 2013, 8 (7), pp.e67523. ⟨10.1371/JOURNAL.PONE.0067523⟩
Journal articles hal-01012135v1

Search for a correlation between ANTARES neutrinos and Pierre Auger Observatory UHECRs arrival directions

S. Adrian-Martinez , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
The Astrophysical Journal, 2013, 774, pp.19. ⟨10.1088/0004-637X/774/1/19⟩
Journal articles in2p3-00677745v1
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Prokaryotic responses to hydrostatic pressure in the ocean - a review

Christian Tamburini , Mehdi Boutrif , Marc Garel , Rita Colwell , Jody W. Deming
Environmental Microbiology, 2013, 15 (5), pp.1262-1274. ⟨10.1111/1462-2920.12084⟩
Journal articles hal-01988054v1
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The First Genomic and Proteomic Characterization of a Deep-Sea Sulfate Reducer: Insights into the Piezophilic Lifestyle of Desulfovibrio piezophilus

Nathalie Pradel , Boyang Ji , G Gimenez , E Talla , P Lenoble
PLoS ONE, 2013, 8 (1), pp.e55130. ⟨10.1371/journal.pone.0055130⟩
Journal articles hal-00787201v1

Measurement of the atmospheric $\nu_\mu$ energy spectrum from 100 GeV to 200 TeV with the ANTARES telescope

S. Adrián-Martínez , A. Albert , Imen Al Samarai , M. André , M. Anghinolfi
European Physical Journal C: Particles and Fields, 2013, 73, pp.2606. ⟨10.1140/epjc/s10052-013-2606-4⟩
Journal articles in2p3-00861705v1

A First Search for coincident Gravitational Waves and High Energy Neutrinos using LIGO, Virgo and ANTARES data from 2007

S. Adrián-Martínez , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Journal of Cosmology and Astroparticle Physics, 2013, 06, pp.008. ⟨10.1088/1475-7516/2013/06/008⟩
Journal articles in2p3-00709861v1

Measurement of Atmospheric Neutrino Oscillations with the ANTARES Neutrino Telescope

S. Adrian-Martinez , Imen Al Samarai , A. Albert , M. Andre , M. Anghinolfi
Physics Letters B, 2012, 714, pp.224-230. ⟨10.1016/j.physletb.2012.07.002⟩
Journal articles in2p3-00709863v1

The ANTARES Telescope Neutrino Alert System

M. Ageron , J. A. Aguilar , Imen Al Samarai , A. Albert , M. André
Astroparticle Physics, 2012, 35, pp.530-536. ⟨10.1016/j.astropartphys.2011.11.011⟩
Journal articles in2p3-00626650v1

How to analyse bioluminescence time series from in situ observatories? Example from high frequency records and real time data at the ANTARES site

Severine Martini , David Nerini , Christian Tamburini
Luminescence, 2012, 27 (2), pp.139-140
Journal articles hal-00741759v1

Measurement of the Group Velocity of Light in Sea Water at the ANTARES Site

S. Adrián-Martínez , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Astroparticle Physics, 2012, 35, pp.552-557. ⟨10.1016/j.astropartphys.2011.12.003⟩
Journal articles in2p3-00660651v1

Search for Relativistic Magnetic Monopoles with the ANTARES Neutrino Telescope

S. Adrián-Martínez , J.A. Aguilar , Imen Al Samarai , A. Albert , M. André
Astroparticle Physics, 2012, 35, pp.634-640. ⟨10.1016/j.astropartphys.2012.02.007⟩
Journal articles in2p3-00677713v1

The Positioning System of the ANTARES Neutrino Telescope

S. Adrián-Martínez , J.A. Aguilar , Imen Al Samarai , A. Albert , M. André
Journal of Instrumentation, 2012, 7, pp.T08002. ⟨10.1088/1748-0221/7/08/T08002⟩
Journal articles in2p3-00677756v1

Search for Cosmic Neutrino Point Sources with Four Year Data of the ANTARES Telescope

S. Adrián-Martínez , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
The Astrophysical Journal, 2012, 760, pp.53. ⟨10.1088/0004-637x/760/1/53⟩
Journal articles hal-01855216v1

A method for detection of muon induced electromagnetic showers with the ANTARES detector

J. A. Aguilar , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2012, 675, pp.56-62. ⟨10.1016/j.nima.2012.01.060⟩
Journal articles in2p3-00626477v1

Search for Neutrino Emission from Gamma-Ray Flaring Blazars with the ANTARES Telescope

S. Adrián-Martínez , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Astroparticle Physics, 2012, 36, pp.204-210. ⟨10.1016/j.astropartphys.2012.06.001⟩
Journal articles in2p3-00708572v1

Search for a diffuse flux of high-energy νμ with the ANTARES neutrino telescope

J.A. Aguilar , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Nuclear Physics B, 2011, 696 (1-2), pp.16-22. ⟨10.1016/j.physletb.2010.11.070⟩
Journal articles in2p3-00545854v1
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Time Calibration of the ANTARES Neutrino Telescope

J.A. Aguilar , Imen Al Samarai , A. Albert , M. André , M. Anghinolfi
Astroparticle Physics, 2011, 34 (7), pp.539-549. ⟨10.1016/j.astropartphys.2010.12.004⟩
Journal articles hal-00722474v1

Desulfovibrio piezophilus sp. nov., a piezophilic, sulfate-reducing bacterium isolated from wood falls in the Mediterranean Sea.

Saber Khelaifia , Marie Laure Fardeau , Nathalie Pradel , Clement Aussignargues , Marc Garel
International Journal of Systematic and Evolutionary Microbiology, 2011, 61 (Pt 11), pp.2706-11. ⟨10.1099/ijs.0.028670-0⟩
Journal articles hal-00747501v1

ANTARES: the first undersea neutrino telescope

M. Ageron , J.A. Aguilar , Imen Al Samarai , A. Albert , F. Ameli
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2011, 656, pp.11-38. ⟨10.1016/j.nima.2011.06.103⟩
Journal articles in2p3-00593848v1
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Emerging concepts on microbial processes in the bathypelagic ocean-ecology, biogeochemistry, and genomics

Toshi Nagata , Christian Tamburini , Javier Arístegui , Federico Baltar , Alexander B. Bochdansky
Deep Sea Research Part II: Topical Studies in Oceanography, 2011, 57 (16), pp.1519-1536. ⟨10.1016/j.dsr2.2010.02.019⟩
Journal articles hal-00591525v1
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Assimilation of marine extracellular polymeric substances by deep-sea prokaryotes in the NW Mediterranean Sea

Mehdi Boutrif , Marc Garel , Matthew T. Cottrell , Christian Tamburini
Environmental Microbiology Reports, 2011, 3 (6), pp.705-709. ⟨10.1111/j.1758-2229.2011.00285.x⟩
Journal articles hal-00746979v1

First Search for Point Sources of High Energy Cosmic Neutrinos with the ANTARES Neutrino Telescope

S. Adrián-Martínez , J. A. Aguilar , Imen Al Samarai , A. Albert , M. André
The Astrophysical journal letters, 2011, 743, pp.L14. ⟨10.1088/2041-8205/743/1/L14⟩
Journal articles in2p3-00626444v1

Acoustic and optical variations during rapid downward motion episodes in the deep north-western Mediterranean Sea

H. van Haren , I. Taupier-Letage , J.A. Aguilar , A. Albert , G. Anton
Deep Sea Research Part I: Oceanographic Research Papers, 2011, 58, pp.875-884. ⟨10.1016/j.dsr.2011.06.006⟩
Journal articles in2p3-00605777v1

Luminous bacteria in the deep-sea waters near the ANTARES underwater neutrino telescope (Mediterranean Sea)

Badr Al Ali , Marc Garel , Philippe Cuny , Juan Carlos Miquel , Tarik Toubal
Chemistry and Ecology, 2010, 26 (1), pp.57-72. ⟨10.1080/02757540903513766⟩
Journal articles hal-00455642v1

Measurement of the atmospheric muon flux with a 4 GeV threshold in the ANTARES neutrino telescope

J. A. Aguilar , Imen Al Samarai , A. Albert , M. Anghinolfi , G. Anton
Astroparticle Physics, 2010, 33 (2), pp.86--90. ⟨10.1016/j.astropartphys.2009.12.002⟩
Journal articles hal-01441853v1

Luminous bacteria in the deep-sea waters near the ANTARES underwater neutrino telescope (Mediterraean Sea)

Badr Al Ali , Marc Garel , Philippe Cuny , Juan Carlos Miquel , Tarik Toubal
Chemistry and Ecology, 2010, 26 (1), pp.57-72. ⟨10.1080/02757540903513766⟩
Journal articles hal-00538059v1

Hydrostatic pressure effects membrane and storage lipid compositions of the piezotolerant hydrocarbon-degrading Marinobacter hydrocarbonoclasticus strain #5

Vincent Grossi , Michail M. Yakimov , Badr Al Ali , Yosmina Tapilatu , Philippe Cuny
Environmental Microbiology, 2010, 12(7), pp.2020-2033. ⟨10.1111/j.1462-2920.2010.02213.x⟩
Journal articles hal-00538056v1

Performance of the Front-End Electronics of the ANTARES Neutrino Telescope

J.A. Aguilar , Imen Al Samarai , A. Albert , M. Anghinolfi , G. Anton
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2010, 622, pp.59-73. ⟨10.1016/j.nima.2010.06.225⟩
Journal articles in2p3-00561381v1

Hydrostatic pressure affects membrane and storage lipid compositions of the piezotolerant hydrocarbon-degrading Marinobacter hydrocarbonoclasticus strain #5

Vincent Grossi , Michail M. Yakimov , Badr Al Ali , Yosmina Tapilatu , Philippe Cuny
Environmental Microbiology, 2010, 12 (7), pp.2020-2033. ⟨10.1111/j.1462-2920.2010.02213.x⟩
Journal articles hal-00514541v1

Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: What the @$#! is wrong with present calculations of carbon budgets?

Adrian B. Burd , Dennis A. Hansell , Deborah K. Steinberg , Thomas R. Anderson , Javier Aristegui
Deep Sea Research Part II: Topical Studies in Oceanography, 2010, 57 (16), pp.1557-1571. ⟨10.1016/j.dsr2.2010.02.022⟩
Journal articles hal-00822453v1

Mesopelagic zone ecology and biogeochemistry - a synthesis

Carol Robinson , Deborah K. Steinberg , Thomas R. Anderson , Javier Aristegui , Craig A. Carlson
Deep Sea Research Part II: Topical Studies in Oceanography, 2010, 57, pp.1504-1518. ⟨10.1016/j.dsr2.2010.02.018⟩
Journal articles hal-00695891v1
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Zenith distribution and flux of atmospheric muons measured with the 5-line ANTARES detector

J.A. Aguilar , A. Albert , G. Anton , S. Anvar , M. Ardid
Astroparticle Physics, 2010, 34 (3), pp.179-184. ⟨10.1016/j.astropartphys.2010.07.001⟩
Journal articles hal-00671849v1
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AMADEUS - The Acoustic Neutrino Detection Test System of the Deep-Sea ANTARES Neutrino Telescope

J.A. Aguilar , Imen Al Samarai , A. Albert , M. Anghinolfi , G. Anton
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2010, 626-627, pp.128-143. ⟨10.1016/j.nima.2010.09.053⟩
Journal articles in2p3-00474914v1

Effects of hydrostatic pressure on microbil alteration of sinking fecal pellets

Christian Tamburini , Madeleine Goutx , Catherine Guigue , Marc Garel , Dominique Lefèvre
Deep Sea Research Part II: Topical Studies in Oceanography, 2009, 56, pp.1533-1546. ⟨10.1016/j.dsr2.2008.12.035⟩
Journal articles hal-00416657v1
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Performance of the First ANTARES Detector Line

M. Ageron , J.A. Aguilar , A. Albert , F. Ameli , M. Anghinolfi
Astroparticle Physics, 2009, 31, pp.277-283. ⟨10.1016/j.astropartphys.2009.02.008⟩
Journal articles in2p3-00365372v1

Cultivation-independent assessment of the bathypelagic archaeal diversity of Thyrrhenian Sea : comparative study of rDNA and rRNA-derived libraries and influence of sample decompression.

Violetta La Cono , Christian Tamburini , Lucrezia Genovese , Gina La Spada , Renata Denaro
Deep Sea Research Part II: Topical Studies in Oceanography, 2009, 56, pp.768-773. ⟨10.1016/j.dsr2.2008.07.025⟩
Journal articles hal-00416669v1

Distribution and activity of Bacteria and Archaea in the different water masses of the Tyrrhenian Sea

Christian Tamburini , Marc Garel , Badr Al Ali , Bastien Mérigot , Pascal Kriwy
Deep Sea Research Part II: Topical Studies in Oceanography, 2008, 56, pp.700-712. ⟨10.1016/j.dsr2.2008.07.021⟩
Journal articles hal-00416112v1

Major viral impact on the functioning of benthic deep-sea ecosytems

Roberto Danovaro , Antonio Dell'Anno , Cinzia Corinaldesi , Mirko Magagnini , Rachel Noble
Nature, 2008, 454, pp.1084-1109. ⟨10.1038/nature07268⟩
Journal articles hal-00362729v1
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Si–C interactions during degradation of the diatom Skeletonema marinoi

Brivaëla Moriceau , Madeleine Goutx , Catherine Guigue , Cindy Lee , Robert Armstrong
Deep Sea Research Part II: Topical Studies in Oceanography, 2008, pp.1381-1395. ⟨10.1016/j.dsr2.2008.11.026⟩
Journal articles hal-00381507v1

The data acquisition system for the ANTARES neutrino telescope

J.A. Aguilar , A. Albert , F. Ameli , M. Anghinolfi , G. Anton
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2007, 570, pp.107-116. ⟨10.1016/j.nima.2006.09.098⟩
Journal articles in2p3-00110813v1

The ANTARES Optical Beacon System

M. Ageron , J.A. Aguilar , A. Albert , F. Ameli , M. Anghinolfi
Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2007, 578, pp.498-509. ⟨10.1016/j.nima.2007.05.325⟩
Journal articles in2p3-00136988v1
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Pressure effects on surface Mediterranean prokaryotes and biogenic silica dissolution during a diatom sinking experiment

Christian Tamburini , J. Garcin , G. Gregori , Karine Leblanc , P. Rimmelin
Aquatic Microbial Ecology, 2006, 43, pp.267-276. ⟨10.3354/ame043267⟩
Journal articles hal-00702531v1

Stratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline

Daniele Daffonchio , Sara Borin , Tullio Brusa , Lorenzo Brusetti , Paul W.J.J. van Der Wielen
Nature, 2006, 440, pp.203-207
Journal articles hal-00023124v1

Life under pressure

Christian Tamburini
Microbial ecology, 2006, 10, pp.1-17
Journal articles hal-00023167v1

First results of the Instrumentation Line for the deep-sea ANTARES neutrino telescope

J.A. Aguilar , A. Albert , F. Ameli , M. Anghinolfi , G. Anton
Astroparticle Physics, 2006, 26, pp.314-324. ⟨10.1016/j.astropartphys.2006.07.004⟩
Journal articles in2p3-00110746v1

A simple and highly reproducible technique to extract the 14CO2 resulting from respiration of 14C-labeled seawater samples

C. Tamburini , Marc Tedetti
Hydrobiologia, 2004, 523, pp.1-7
Journal articles hal-00734176v1

Biopolymer hydrolysis and bacterial production under ambient hydrostatic pressure through a 2000 m water column in the NW Mediterranean

Christian Tamburini , Jean Garcin , Michel Ragot , Armand Bianchi
Deep Sea Research Part II: Topical Studies in Oceanography, 2002, 49, pp.2109-2123. ⟨10.1016/S0967-0645(02)00030-9⟩
Journal articles insu-03634580v1