Christophe PLOMION

Christophe Plomion, Directeur de l'UMR BIOGECO
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Publications

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A Strategy for Studying Epigenetic Diversity in Natural Populations: Proof of Concept in Poplar and Oak

Isabelle Lesur Kupin , Odile Rogier , Mamadou Dia Sow , Christophe Boury , Alexandre Duplan et al.
Journal of Experimental Botany, 2024, 75 (18), pp.5568-5584. ⟨10.1093/jxb/erae266⟩
Article dans une revue hal-04621404 v1
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Trade-offs and Trait Integration in Tree Phenotypes: Consequences for the Sustainable Use of Genetic Resources

Jose Climent , Ricardo Alía , Katri Karkkainen , Catherine Bastien , Marta Benito-Garzon et al.
Current Forestry Reports, 2024, ⟨10.1007/s40725-024-00217-5⟩
Article dans une revue hal-04512732 v1

Tracking population structure and phenology through time using ancient genomes from waterlogged white oak wood

Stefanie Wagner , Andaine Seguin-Orlando , Jean-Charles Leplé , Thibault Leroy , Céline Lalanne et al.
Molecular Ecology, 2024, 33 (3), ⟨10.1111/mec.16859⟩
Article dans une revue hal-04717422 v1
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Resilience of genetic diversity in forest trees over the Quaternary

Pascal Milesi , Chedly Kastally , Benjamin Dauphin , Sandra Cervantes , Francesca Bagnoli et al.
Nature Communications, 2024, 15 (1), pp.8538. ⟨10.1038/s41467-024-52612-y⟩
Article dans une revue hal-04746980 v1
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Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets

Roberta Gargiulo , Véronique Decroocq , Santiago C. Gonzalez-Martinez , Ivan Paz‐vinas , Jean‐marc Aury et al.
Evolutionary Applications, 2024, 17 (5), ⟨10.1111/eva.13691⟩
Article dans une revue hal-04590931 v1
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Low-frequency somatic mutations are heritable in tropical trees Dicorynia guianensis and Sextonia rubra

Sylvain Schmitt , Patrick Heuret , Valérie Troispoux , Mélanie Beraud , Jocelyn Cazal et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121, ⟨10.1073/pnas.2313312121⟩
Article dans une revue hal-04481461 v1
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Common microgeographical selection patterns revealed in four European conifers

Ivan Scotti , Hadrien Lalagüe , Sylvie Oddou-Muratorio , Rose Ruiz Daniels , Delphine Grivet et al.
Molecular Ecology, 2023, 32 (2), pp.393-411. ⟨10.1111/mec.16750⟩
Article dans une revue hal-04060643 v1
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Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

Gregoire Le Provost , Céline Lalanne , Isabelle Lesur , Jean-Marc Louvet , Sylvain Delzon et al.
BMC Plant Biology, 2023, 23 (108), ⟨10.1186/s12870-023-04069-2⟩
Article dans une revue hal-04003618 v1
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Between but Not Within-Species Variation in the Distribution of Fitness Effects

Jennifer James , Chedly Kastally , Katharina B Budde , Santiago C. Gonzalez-Martinez , Pascal Milesi et al.
Molecular Biology and Evolution, 2023, 40 (11), ⟨10.1093/molbev/msad228⟩
Article dans une revue hal-04598142 v1
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A safe breeding ground: genetically improved maritime pine for growth and stem form has more efficient but not more vulnerable xylem

Yanjun Song , Xavier P. Bouteiller , Maximilian Larter , Christophe Plomion , Fabrice Sin et al.
Tree Physiology, 2023, 43 (3), pp.366-378. ⟨10.1093/treephys/tpac125⟩
Article dans une revue hal-04030010 v1
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Genome‐wide evolutionary response of European oaks during the Anthropocene

Dounia Saleh , Jun Chen , Jean-Charles Leplé , Thibault Leroy , Laura Truffaut et al.
Evolution Letters, 2022, 6 (1), pp.4-20. ⟨10.1002/evl3.269⟩
Article dans une revue hal-03553889 v1
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Molecular plasticity to soil water deficit differs between sessile oak (Quercus Petraea (Matt.) Liebl.) high- and low-water use efficiency genotypes.

Gregoire Le Provost , Theo Gerardin , Christophe Plomion , Oliver Brendel
Article dans une revue hal-03739690 v1
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Combining Climatic and Genomic Data Improves Range-Wide Tree Height Growth Prediction in a Forest Tree

Juliette Archambeau , Marta Benito-Garzón , Frederic Barraquand , Marina de Miguel , Christophe Plomion et al.
The American Naturalist, 2022, ⟨10.1086/720619⟩
Article dans une revue hal-03778765 v1
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Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie et al.
Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩
Article dans une revue hal-03771214 v1

Polygenic adaptation and negative selection across traits, years and environments in a long-lived plant species (Pinus pinaster Ait., Pinaceae)

Marina de Miguel , Isabel Rodríguez-Quilón , Myriam Heuertz , Agathe Hurel , Delphine Grivet et al.
Molecular Ecology, 2022, 31 (7), pp.2089-2105. ⟨10.1111/mec.16367⟩
Article dans une revue hal-03963280 v1
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A Chromosome-level genome assembly of the European Beech (Fagus sylvatica) reveals anomalies for organelle DNA integration, repeat Content and distribution of SNPs

Bagdevi Mishra , Bartosz Ulaszewski , Joanna Meger , Jean-Marc Aury , Catherine Bodénès et al.
Frontiers in Genetics, 2022, 12, pp.691058. ⟨10.3389/fgene.2021.691058⟩
Article dans une revue hal-03602006 v1
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Growth and mortality of the oak processionary moth, Thaumetopoea processionea, on two oak species: direct and trait-mediated effects of host and neighbour species

Thomas Damestoy , Xoaquín Moreira , Hervé Jactel , Elena Valdés-Correcher , Christophe Plomion et al.
Entomologia Generalis, 2021, 41 (1), pp.13-25. ⟨10.1127/entomologia/2020/1005⟩
Article dans une revue hal-03306702 v1
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High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang , Pierre P. Abadie , Valérie Léger , Thibaut Decourcelle , Jean-Marc Frigerio et al.
Peer Community In Forest & Wood Sciences, 2021, pp.1-33. ⟨10.1101/388447⟩
Article dans une revue hal-01985021 v1

Genetic basis of growth, spring phenology, and susceptibility to biotic stressors in maritime pine

Agathe Hurel , Marina de Miguel , Cyril Dutech , Marie‐laure Desprez‐loustau , Christophe Plomion et al.
Evolutionary Applications, 2021, pp.1-23. ⟨10.1111/eva.13309⟩
Article dans une revue hal-03427456 v1
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The GenTree Leaf Collection: Inter‐ and intraspecific leaf variation in seven forest tree species in Europe

Raquel Benavides , Bárbara Carvalho , Cristina Bastias , David López‐quiroga , Antonio Mas et al.
Global Ecology and Biogeography, 2021, 30 (3), pp.590-597. ⟨10.1111/geb.13239⟩
Article dans une revue (data paper) hal-03282266 v1

Higher needle anatomic plasticity is related to better water-use efficiency and higher resistance to embolism in fast-growing Pinus pinaster families under water scarcity

Didier Bert , Grégoire Le Provost , Sylvain Delzon , Christophe Plomion , Jean-Marc Gion
Trees - Structure and Function, 2021, 35, pp.287-306. ⟨10.1007/s00468-020-02034-2⟩
Article dans une revue hal-02964038 v1

Linked selection shapes the landscape of genomic variation in three oak species

Yi‐Ye Liang , Yong Shi , Shuai Yuan , Biao‐feng Zhou , Xue‐yan Chen et al.
New Phytologist, In press, ⟨10.1111/nph.17793⟩
Article dans une revue hal-03423484 v1
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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species

Lars Opgenoorth , Benjamin Dauphin , Raquel Benavides , Katrin Heer , Paraskevi Alizoti et al.
GigaScience, 2021, 10 (3), pp.giab010. ⟨10.1093/gigascience/giab010⟩
Article dans une revue (data paper) hal-03282821 v1

The pulse of the tree is under genetic control: eucalyptus as a case study

Jérôme Bartholomé , A. Mabiala , R. Burlett , Didier Bert , Jean-Charles Leplé et al.
The Plant Journal, 2020, pp.1-19. ⟨10.1111/tpj.14734⟩
Article dans une revue hal-02555321 v1
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Évolution passée et contemporaine des chênes

Antoine Kremer , Christophe Plomion , Thibault Leroy , Hermine Alexandre , Laura Truffaut et al.
Revue forestière française, 2020, 72 (4), pp.297-318. ⟨10.20870/revforfr.2020.5331⟩
Article dans une revue hal-03206333 v1
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Author Correction: The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

Elisabet Martínez-Sancho , Lenka Slámová , Sandro Morganti , Claudio Grefen , Barbara Carvalho et al.
Scientific Data , 2020, 7 (1), ⟨10.1038/s41597-020-0447-1⟩
Article dans une revue hal-03282224 v1
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Interactions entre les chênes et la chenille processionnaire du chêne : de l'arbre à la forêt

Thomas Damestoy , Hervé Jactel , Hubert Schmuck , Christophe Plomion , Bastien Castagneyrol
Rendez-vous Techniques de l'ONF, 2020, 65-66, pp.53-60
Article dans une revue hal-04253863 v1
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Adaptive introgression as a driver of local adaptation to climate in European white oaks

Thibault Leroy , Jean-Marc Louvet , Céline Lalanne , Grégoire Le Provost , Karine Labadie et al.
New Phytologist, 2020, 226 (4), pp.1171-1182. ⟨10.1111/nph.16095⟩
Article dans une revue hal-02627923 v1

Oak genomics is proving its worth

Francis Martin , Christophe Plomion
New Phytologist, 2020, 226 (4), pp.943-946. ⟨10.1111/nph.16560⟩
Article dans une revue hal-02912674 v1

Tree species identity and forest composition affect the number of oak processionary moth captured in pheromone traps and the intensity of larval defoliation

Thomas Damestoy , Herve Jactel , Thierry Bélouard , Hubert Schmuck , Christophe Plomion et al.
Agricultural and Forest Entomology, 2020, 22 (2), pp.169-177. ⟨10.1111/afe.12371⟩
Article dans une revue hal-02549372 v1
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Uncovering signatures of DNA methylation in ancient plant remains from patterns of post-mortem DNA damage

Stefanie Wagner , Christophe Plomion , Ludovic Orlando
Frontiers in Ecology and Evolution, 2020, 8, pp.1-9. ⟨10.3389/fevo.2020.00011⟩
Article dans une revue hal-02621847 v1
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Oak symbolism in the light of genomics

Thibault Leroy , Christophe Plomion , Antoine Kremer
New Phytologist, 2020, 26 (4), pp.1012-1017. ⟨10.1111/nph.15987⟩
Article dans une revue hal-02625840 v1

Genomic landscape of the global oak phylogeny

Andrew Hipp , Paul Manos , Marlene Hahn , Michael Avishai , Catherine Bodénès et al.
New Phytologist, 2020, 226 (4), pp.1198-1212. ⟨10.1111/nph.16162⟩
Article dans une revue hal-03162542 v1

Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth

Thomas Damestoy , Benjamin Brachi , Xoaquín Moreira , Herve Jactel , Christophe Plomion et al.
Tree Physiology, 2019, 39 (4), pp.615-627. ⟨10.1093/treephys/tpy149⟩
Article dans une revue hal-02617788 v1
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Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers

Thibault Leroy , Quentin Rougemont , Jean-Luc Dupouey , Catherine Bodenes , Céline Lalanne et al.
New Phytologist, 2019, online fisrt, pp.1-15. ⟨10.1111/nph.16039⟩
Article dans une revue hal-02622295 v1

The genetics of exapted resistance to two exotic pathogens in pedunculate oak

Jérôme Bartholome , Benjamin Brachi , Benoit Marçais , Amira Mougou , Catherine Bodenes et al.
New Phytologist, 2019, online first, pp.1-16. ⟨10.1111/nph.16319⟩
Article dans une revue hal-02619694 v1
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Paleogenomics: reconstruction of plant evolutionary trajectories from modern and ancient DNA

Caroline Pont , Stefanie Wagner , Antoine Kremer , Christophe Plomion , Jérôme Salse et al.
Genome Biology, 2019, 20 (1), pp.1-17. ⟨10.1186/s13059-019-1627-1⟩
Article dans une revue hal-02278824 v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559 v1
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Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand

Isabelle Lesur Kupin , Hermine Alexandre , Christophe Boury , Emilie Chancerel , Christophe Plomion et al.
Frontiers in Plant Science, 2018, 9, pp.1-16. ⟨10.3389/fpls.2018.00996⟩
Article dans une revue hal-02628743 v1
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Hardwood tree genomics: unlocking woody plant biology

Gerald A. Tuskan , Andrew T. Groover , Jeremy Schmutz , Stephen Paul Difazio , Alexander Myburg et al.
Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.01799⟩
Article dans une revue hal-02622509 v1
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High-Throughput DNA sequencing of ancient wood

Stefanie Wagner , Frédéric Lagane , Andaine Seguin-Orlando , Mikkel Schubert , Thibault Leroy et al.
Molecular Ecology, 2018, 27 (5), pp.1138-1154. ⟨10.1111/mec.14514⟩
Article dans une revue hal-01783724 v1

A Tchernobyl, l'Inra étudie la résistance du chêne

Séverine Guillemet , Christophe Plomion , Thibault Leroy
Sud Ouest, 2018, 26 août 2018, pp.16
Article dans une revue hal-02617998 v1

Gaining a global perspective on Fagaceae genomic diversification and adaptation

Charles H. Cannon , Oliver Brendel , Min Deng , Andrew L. Hipp , Antoine Kremer et al.
New Phytologist, 2018, 218 (3), pp.894-897. ⟨10.1111/nph.15101⟩
Article dans une revue hal-02620604 v1

X-ray computed tomography to decipher the genetic architecture of tree branching traits: oak as a case study

Jialin Song , Oliver Brendel , Catherine Bodenes-Brezard , Christophe Plomion , Antoine Kremer et al.
Tree Genetics and Genomes, 2017, 13 (5), pp.1-15. ⟨10.1007/s11295-016-1083-y⟩
Article dans une revue hal-01530800 v1

Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding

Jason A. Holliday , Sally N. Aitken , Janice E. K. Cooke , Bruno Fady , Santiago C. Gonzalez Martinez et al.
Molecular Ecology, 2017, 26 (3), pp.706-717. ⟨10.1111/mec.13963⟩
Article dans une revue hal-01512033 v1
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Extensive recent secondary contacts between four European white oak species

Thibault Leroy , Camille Roux , Laure Villate , Catherine Bodénès , Jonathan Romiguier et al.
New Phytologist, 2017, 214 (2), pp.865-878. ⟨10.1111/nph.14413⟩
Article dans une revue hal-01608621 v1
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Forward selection in a maritime pine polycross progeny trial using pedigree reconstruction

Marjorie Vidal , Christophe Plomion , Annie Raffin , Luc Harvengt , Laurent Bouffier
Annals of Forest Science, 2017, 74 (1), pp.1-12. ⟨10.1007/s13595-016-0596-8⟩
Article dans une revue hal-01602767 v1
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Performance of genomic prediction within and across generations in maritime pine

Jérôme Bartholomé , Joost van Heerwaarden , Fikret Isik , Christophe C. Boury , Marjorie Vidal et al.
BMC Genomics, 2016, 17 (1), 14 p. ⟨10.1186/s12864-016-2879-8⟩
Article dans une revue hal-02636107 v1
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Genomic selection in maritime pine

Fikret Isik , Jérôme Bartholomé , Alfredo Farjat , Emilie E. Chancerel , Annie A. Raffin et al.
Plant Science, 2016, 242, pp.108-119. ⟨10.1016/j.plantsci.2015.08.006⟩
Article dans une revue hal-02635765 v1
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High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)

Christophe Plomion , Jérôme Bartholomé , Isabelle Lesur Kupin Lesur , Christophe C. Boury , Isabel Rodríguez-Quilón et al.
Molecular Ecology Resources, 2016, 16 (2), pp.574-587. ⟨10.1111/1755-0998.12464⟩
Article dans une revue istex hal-02640393 v2
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Structural and functional characterization of tree proteins involved in redox regulation: a new frontier in forest science

Jean-Pierre Jacquot , Jérémy Couturier , Claude Didierjean , Éric Gelhaye , Mélanie Morel-Rouhier et al.
Annals of Forest Science, 2016, 73 (1), pp.119-134. ⟨10.1007/s13595-014-0442-9⟩
Article dans une revue hal-01284229 v1
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Understanding the genetic bases of adaptation to soil water deficit in trees through the examination of water use efficiency and cavitation resistance: maritime pine as a case study

Christophe Plomion , J Bartholomé , Laurent Bouffier , Oliver Brendel , H Cochard et al.
Journal of Plant Hydraulics, 2016, 3, ⟨10.20870/jph.2016.e008⟩
Article dans une revue hal-01438778 v1
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High-density linkage mapping and distribution of segregation distortion regions in the oak genome

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , François Ehrenmann , Antoine Kremer , Christophe Plomion
DNA Research, 2016, 23 (2), pp.115-124. ⟨10.1093/dnares/dsw001⟩
Article dans une revue hal-02635371 v1

Copper stress-induced changes in leaf soluble proteome of Cu-sensitive and tolerant Agrostis capillaris L. populations

Elena Hego , Sebastien Vilain , Aurélien Barré , Stéphane Claverol , Jean-William Dupuy et al.
Proteomics, 2016, 16 (9), pp.1386-1397. ⟨10.1002/pmic.201500083⟩
Article dans une revue istex hal-02640090 v1
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Linkage and association mapping for two major traits used in the maritime pine breeding program: height growth and stem straightness.

Jérôme Bartholome , Marco Cam Bink , Joost van Heerwaarden , Emilie Chancerel , Christophe Boury et al.
PLoS ONE, 2016, 11 (11), 21 p. ⟨10.1371/journal.pone.0165323⟩
Article dans une revue hal-02636715 v1
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Forest tree genomics: 10 achievements from the past 10 years and future prospects

Christophe Plomion , Catherine Bastien , Marie-Béatrice Bogeat-Triboulot , Laurent Bouffier , Annabelle Déjardin et al.
Annals of Forest Science, 2016, 73 (1), pp.77-103. ⟨10.1007/s13595-015-0488-3⟩
Article dans une revue (article de synthèse) hal-01330031 v1

Genomic resources notes accepted 1 August 2015 - 31 September 2015

. Genomic Resources Development Consortium , Annegret Kohler , Antoine Kremer , Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur et al.
Molecular Ecology Resources, 2016, 16 (1), pp.377-377. ⟨10.1111/1755-0998.12482⟩
Article dans une revue istex hal-02630738 v1

Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.)

Grégoire Le Provost , Isabelle Lesur Kupin , Céline Lalanne , Corinne da Silva , Karine Labadie et al.
Tree Physiology, 2016, 36 (11), pp.1330-1342. ⟨10.1093/treephys/tpw056⟩
Article dans une revue hal-01602423 v1
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Evidence of intense chromosomal shuffling during conifer evolution

Marina de Miguel , Jérôme Bartholome , François Ehrenmann , Florent Murat , Yoshinari Moriguchi et al.
Genome Biology and Evolution, 2015, 7 (10), pp.evv185. ⟨10.1093/gbe/evv185⟩
Article dans une revue hal-02285512 v1
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Paternity recovery in two maritime pine polycross mating designs and consequences for breeding

Marjorie Vidal , Christophe Plomion , Luc Harvengt , Annie A. Raffin , Christophe C. Boury et al.
Tree Genetics and Genomes, 2015, 11 (5), 13 p. ⟨10.1007/s11295-015-0932-4⟩
Article dans une revue hal-02634494 v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe et al.
Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩
Article dans une revue istex hal-01579667 v1
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The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

Isabelle Lesur , Grégoire G. Le Provost , Pascal Bento , Corinne da Silva , Jean-Charles Leplé et al.
BMC Genomics, 2015, 16 (1), pp.112. ⟨10.1186/s12864-015-1331-9⟩
Article dans une revue hal-02285504 v1

Nucleotide polymorphisms in a pine ortholog of the Arabidopsis degrading enzyme cellulase KORRIGAN are associated with early growth performance in Pinus pinaster

José Antonio Cabezas , Santiago C. González-Martínez , Carmen Collada , María Angeles Guevara , Christophe C. Boury et al.
Tree Physiology, 2015, 35 (9), pp.1000-1006. ⟨10.1093/treephys/tpv050⟩
Article dans une revue hal-02640523 v1

Molecular proxies for climate maladaptation in a long-lived tree (Pinus pinaster Aiton, Pinaceae)

Juan-Pablo Jaramillo-Correa , Isabel Rodríguez-Quilón , Delphine Grivet , Camille Lepoittevin , Federico Sebastiani et al.
Genetics, 2015, 199 (3), pp.793-807. ⟨10.1534/genetics.114.173252⟩
Article dans une revue hal-02635555 v1

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

Isabelle Lesur Kupin Lesur , Alison Bechade , Céline C. Lalanne , Christophe Klopp , Céline Noirot et al.
Molecular Ecology Resources, 2015, 15 (5), pp.1192-1204. ⟨10.1111/1755-0998.12373⟩
Article dans une revue istex hal-02640346 v1

Quantitative proteomic and phosphoproteomic approaches for deciphering the signaling pathway for tension wood formation in poplar

Mélanie Mauriat , Jean-Charles Leplé , Stéphane Claverol , Jérôme Bartholomé , Luc Négroni et al.
Journal of Proteome Research, 2015, 14 (8), pp.3188-3203. ⟨10.1021/acs.jproteome.5b00140⟩
Article dans une revue hal-02640086 v1

EucaMaps: linking genetic maps and associated QTLs to the Eucalyptus grandis genome

Jean-Marc J.-M. Gion , Philippe Chaumeil , Christophe Plomion
Tree Genetics and Genomes, 2015, 11 (1), pp.1-7. ⟨10.1007/s11295-014-0795-0⟩
Article dans une revue hal-02631655 v1

High-resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly

Jérôme Bartholomé , Eric Mandrou , André Mabiala , Jerry Jenkins , Ibouniyamine Nabihoudine et al.
New Phytologist, 2015, 206 (4), pp.1283-1296. ⟨10.1111/nph.13150⟩
Article dans une revue hal-02637865 v1

Genetic architecture of carbon isotope composition and growth in Eucalyptus across multiple environments

Jérôme Bartholomé , André Mabiala , Bruno Savelli , Didier Bert , Oliver Brendel et al.
New Phytologist, 2015, 206 (4), pp.1437 - 1449. ⟨10.1111/nph.13301⟩
Article dans une revue hal-01556859 v1

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

Camille Lepoittevin , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Laure Villate , Tiange Lang et al.
Molecular Ecology Resources, 2015, 15 (6), pp.1446-1459. ⟨10.1111/1755-0998.12407⟩
Article dans une revue istex hal-02635881 v1
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Adaptation : vers un enrichissement du dialogue recherche-gestion

Myriam Legay , Catherine Bastien , Jean-Charles Bastien , Xavier Bartet , Hendrik Davi et al.
Innovations Agronomiques, 2015, 47, pp.121-130. ⟨10.15454/1.462269223291339E12⟩
Article dans une revue hal-02635982 v1

A linkage disequilibrium perspective on the genetic mosaic of speciation in two hybridizing Mediterranean white oaks

P. G. Goicoechea , A. Herrán , Jonathan Durand , Catherine Bodenes-Brezard Bodénès , Christophe Plomion et al.
Heredity, 2015, 114 (4), pp.373-386. ⟨10.1038/hdy.2014.113⟩
Article dans une revue hal-02631883 v1

LPmerge: an R package for merging genetic maps by linear programming

Jeffrey B. Endelman , Christophe Plomion
Bioinformatics, 2014, 30 (11), pp.1623-1624. ⟨10.1093/bioinformatics/btu091⟩
Article dans une revue hal-02637910 v1

Proteomic analysis during ontogenesis of secondary xylem in maritime pine

Marcelo Arnoldo Garces , Grégoire G. Le Provost , Céline C. Lalanne , Stéphane Claverol , Aurélien Barré et al.
Tree Physiology, 2014, 34 (11), pp.1263-1277. ⟨10.1093/treephys/tpt117⟩
Article dans une revue hal-02632854 v1

Limited genetic variability and phenotypic plasticity detected for cavitation resistance in a Mediterranean pine

Jean-Baptiste J.-B. Lamy , Sylvain S. Delzon , Pauline Bouche Bouche P.M. , Ricardo Alia Alia , Giovanni Giuseppe G. G. Vendramin et al.
New Phytologist, 2014, 201 (3), pp.874-886. ⟨10.1111/nph.12556⟩
Article dans une revue hal-00964858 v1
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Intensification des itinéraires sylvicoles et des récoltes : implication pour la durabilité des systèmes

Laurent Augusto , David Achat , Vincent Boulanger , Didier Canteloup , Guy Landmann et al.
Innovations Agronomiques, 2014, 41, pp.13-30. ⟨10.17180/ee3c-4577⟩
Article dans une revue hal-02632901 v1

Differential accumulation of soluble proteins in roots of metallicolous and nonmetallicolous populations of Agrostis capillaris L. exposed to Cu

Elena Hego , Clémence Bes , Franck F. Bedon , Patricia M. Palagi , Philippe Chaumeil et al.
Proteomics, 2014, 14 (15), pp.1746-1758. ⟨10.1002/pmic.201300168⟩
Article dans une revue istex hal-02633974 v1

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology

Javier Canales , Rocío Bautista , Philippe Label , Josefa Gómez-Maldonado , Isabelle Lesur Kupin Lesur et al.
Plant Biotechnology Journal, 2014, 12 (3), pp.286-299. ⟨10.1111/pbi.12136⟩
Article dans une revue hal-02640932 v1
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The genetics of water-use efficiency and its relation to growth in maritime pine

Elisa Marguerit-Jacob , Laurent Bouffier , Emilie Chancerel , Paolo Costa , Frederic Lagane et al.
Journal of Experimental Botany, 2014, 65 (17), pp.4757 - 4768. ⟨10.1093/jxb/eru226⟩
Article dans une revue hal-01556003 v1
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Genome-wide distribution of genetic diversity and linkage disequilibrium in a mass-selected population of maritime pine

Christophe Plomion , Emilie E. Chancerel , Jeffrey Endelman , Jean-Baptiste J.-B. Lamy , Eric Mandrou et al.
BMC Genomics, 2014, 15, 17 p. ⟨10.1186/1471-2164-15-171⟩
Article dans une revue hal-02636858 v1
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Nucleotide diversity in lignification genes and QTNs for lignin quality in a multi-parental population of Eucalyptus urophylla

Eric Mandrou , Marie Denis , Christophe Plomion , Franck F. Salin , Frédéric Mortier et al.
Tree Genetics and Genomes, 2014, 10 (5), pp.1281-1290. ⟨10.1007/s11295-014-0760-y⟩
Article dans une revue hal-02632477 v1
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Soil water stress affects both cuticular wax content and cuticle-related gene expression in young saplings of maritime pine (Pinus pinaster Ait)

Grégoire G. Le Provost , Frederic Domergue , Céline C. Lalanne , Patricio Ramos Campos , Antoine Grosbois et al.
BMC Plant Biology, 2013, 13, ⟨10.1186/1471-2229-13-95⟩
Article dans une revue hal-02648235 v1

Oak genomics takes off … and enters the ecological genomics era

Christophe Plomion , Virgil Fievet
New Phytologist, 2013, 199 (2), pp.308-310. ⟨10.1111/nph.12357⟩
Article dans une revue hal-02648909 v1

Fagaceae trees as models to integrate ecology, evolution and genomics

Remy Petit Petit R.J. , John Carlson , Alexandru L. Curtu , Marie Laure Loustau , Christophe Plomion et al.
New Phytologist, 2013, 197 (2), pp.369-371. ⟨10.1111/nph.12089⟩
Article dans une revue hal-02651257 v1

Genetic mapping of EST-derived simple sequence repeats (EST-SSRs) to identify QTL for leaf morphological characters in a Quercus robur full-sib family

Oliver Gailing , Catherine Bodenes-Brezard Bodénès , Reiner Finkeldey , Antoine Kremer , Christophe Plomion
Tree Genetics and Genomes, 2013, 9 (5), pp.1361-1367. ⟨10.1007/s11295-013-0633-9⟩
Article dans une revue istex hal-02646913 v1
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Plasticity of primary and secondary growth dynamics in Eucalyptus hybrids: a quantitative genetics and QTL mapping perspective

Jérôme Bartholome , Frederic Salmon , Philippe Vigneron , Jean-Marc Bouvet , Christophe Plomion et al.
BMC Plant Biology, 2013, 13, 14 p. ⟨10.1186/1471-2229-13-120⟩
Article dans une revue hal-02644680 v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Emilie E. Chancerel , Jean-Baptiste J.-B. Lamy , Isabelle Lesur Kupin Lesur , Celine C. Noirot , Christophe Klopp et al.
BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩
Article dans une revue hal-00964786 v1
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A forest of sigmoidalistic monsters: Part 1: phenotypic description

Christophe Plomion
Journal of Plant Hydraulics, 2013, 1, 5 p
Article dans une revue hal-02641885 v1
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Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Saneyoshi Ueno , Christophe Klopp , Jean-Charles Leplé , Jérémy Derory , Céline Noirot et al.
BMC Genomics, 2013, 14, 15 p. ⟨10.1186/1471-2164-14-236⟩
Article dans une revue hal-02650124 v1
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Annotated genetic linkage maps of Pinus pinaster Ait. from a Central Spain population using microsatellite and gene based markers

Marina de Miguel , Nuria de Maria , Luis Diaz , Enrique Sáez-Laguna , David Sánchez-Gómez et al.
BMC Genomics, 2012, 13, 14 p. ⟨10.1186/1471-2164-13-527⟩
Article dans une revue hal-02648778 v1

Association mapping for growth, straightness and wood chemistry traits in the Pinus pinaster Aquitaine breeding population

Camille Lepoittevin , Luc Harvengt , Christophe Plomion , Pauline Garnier‐géré
Tree Genetics and Genomes, 2012, 8 (1), pp.113-126. ⟨10.1007/s11295-011-0426-y⟩
Article dans une revue istex hal-02650860 v1
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Comparative mapping in the Fagaceae and beyond with EST-SSRs

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Oliver O. Gailing , Giovanni G. G. G. Vendramin , Francesca F. Bagnoli et al.
BMC Plant Biology, 2012, 12 (153), 40 p. ⟨10.1186/1471-2229-12-153⟩
Article dans une revue hal-00964224 v1

Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor

Delphine D. Vincent , Annegret Kohler , Stéphane Claverol , Emilie Solier , Johann Joets et al.
Journal of Proteome Research, 2012, 11 (1), pp.157-171. ⟨10.1021/pr200895f⟩
Article dans une revue hal-02646860 v1

Proteomic plasticity of two Eucalyptus genotypes under contrasted water regimes in the field

Franck F. Bedon , Emilie Villar , Delphine D. Vincent , Jean-William Dupuy , Anne-Marie Lomenech et al.
Plant, Cell and Environment, 2012, 35 (4), pp.790-805. ⟨10.1111/j.1365-3040.2011.02452.x⟩
Article dans une revue hal-02647900 v1
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Transcriptional analysis of differentially expressed genes in response to stem inclination in young seedlings of pine

P. Ramos , Grégoire G. Le Provost , C. Gantz , Christophe Plomion , R. Herrera
Plant Biology, 2012, 14 (6), pp.923-933. ⟨10.1111/j.1438-8677.2012.00572.x⟩
Article dans une revue istex hal-02653052 v1

QST < FST as a signature of canalization

Jean-Baptiste J.-B. Lamy , Christophe Plomion , Antoine Kremer , Sylvain S. Delzon
Molecular Ecology, 2012, 21 (23), pp.5646-5655
Article dans une revue hal-02643592 v1

Towards decoding the conifer giga-genome

John Mackay , Jeffrey F. D. Dean , Christophe Plomion , Daniel G. Peterson , Francisco M. Cánovas et al.
Plant Molecular Biology, 2012, 80 (6), pp.555-569. ⟨10.1007/s11103-012-9961-7⟩
Article dans une revue istex hal-02646567 v1
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Micro-evolutionary patterns of juvenile wood density in a pine species

Jean-Baptiste J.-B. Lamy , Frédéric F. Lagane , Christophe Plomion , Hervé H. Cochard , Sylvain S. Delzon
Plant Ecology, 2012, 213 (11), pp.1781-1792. ⟨10.1007/s11258-012-0133-2⟩
Article dans une revue istex hal-02649653 v1

Role of waterlogging-responsive genes in shaping interspecific differentiation between two sympatric oak species

Grégoire Le Provost , Cécile Sulmon , Jean-Marc Frigerio , Catherine Bodénès , Antoine Kremer et al.
Tree Physiology, 2012, 32 (2), pp.119-134. ⟨10.1093/treephys/tpr123⟩
Article dans une revue hal-00686932 v1

A candidate gene for lignin composition in Eucalyptus: cinnamoyl-CoA reductase (CCR)

Eric Mandrou , Paulo Ricardo Gherardi Hein , Emilie Villar , Philippe Vigneron , Christophe Plomion et al.
Tree Genetics and Genomes, 2012, 8 (2), pp.353-364. ⟨10.1007/s11295-011-0446-7⟩
Article dans une revue istex hal-02646117 v1

Genomics of Fagaceae

Antoine Kremer , Albert G. Abbott , John E. Carlson , Paul S. Manos , Christophe Plomion et al.
Tree Genetics and Genomes, 2012, 8 (3), pp.583-610. ⟨10.1007/s11295-012-0498-3⟩
Article dans une revue hal-02644452 v1

ACC oxidase and ACC synthase expression profiles after leaning of young radiata (P. radiata D. Don) and maritime pine (P. pinaster Ait.) seedlings

Patricio Ramos , Claudio Valenzuela , Grégoire G. Le Provost , Christophe Plomion , Carlos Gantz et al.
Journal of Plant Growth Regulation, 2012, 31 (3), pp.382-391. ⟨10.1007/s00344-011-9248-2⟩
Article dans une revue istex hal-02652269 v1
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Genetic parameters of growth, straightness and wood chemistry traits in Pinus pinaster

Lepoittevin , Rousseau , Guillemin , Gauvrit , Besson et al.
Annals of Forest Science, 2011, 68 (4), pp.873-884. ⟨10.1007/s13595-011-0084-0⟩
Article dans une revue hal-00930817 v1
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Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa et al.
BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩
Article dans une revue hal-02649406 v1

A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genomic libraries

Isabelle Lesur , Jérôme J. Durand , Federico Sebastiani , Niclas Gyllenstrand , Catherine Bodenes-Brezard Bodénès et al.
Tree Genetics and Genomes, 2011, 7 (6), pp.1277-1285. ⟨10.1007/s11295-011-0412-4⟩
Article dans une revue istex hal-02644223 v1
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RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

Emilie Villar , Christophe Klopp , Céline Noirot , Evandro Novaes , Matias Kirst et al.
BMC Genomics, 2011, 12, pp.1-18. ⟨10.1186/1471-2164-12-538⟩
Article dans une revue hal-02645044 v1

Characterisation and natural variation of a dehydrin gene in Quercus petraea (Matt.) Liebl.

B. Vornam , O. Gailing , Jérémy Derory , Christophe Plomion , Antoine Kremer et al.
Plant Biology, 2011, 13 (6), pp.881 - 887. ⟨10.1111/j.1438-8677.2011.00446.x⟩
Article dans une revue istex hal-02647308 v1

Interaction between environmental factors affects the accumulation of root proteins in hydroponically grown Eucalyptus globulus (Labill.)

Franck F. Bedon , Juan Majada , Isabel Feito , Philippe Chaumeil , Jean-William Dupuy et al.
Plant Physiology and Biochemistry, 2011, 49 (1), pp.69-76. ⟨10.1016/j.plaphy.2010.09.020⟩
Article dans une revue hal-02647579 v1
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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

Patricia P. Faivre-Rampant , Isabelle Lesur , Clément Boussardon , Frederique Bitton , Marie-Laure Martin-Magniette et al.
BMC Genomics, 2011, 12, 13 p. ⟨10.1186/1471-2164-12-292⟩
Article dans une revue hal-02646702 v1

Forest ecosystem genomics and adaptation : EVOLTREE conference report

Antoine Kremer , Barbara Vinceti , Ricardo Alia , Jaroslav Burczyk , Stephen Cavers et al.
Tree Genetics and Genomes, 2011, 7 (4), pp.869-875. ⟨10.1007/s11295-011-0378-2⟩
Article dans une revue hal-02645944 v1
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Deciphering cork formation in Quercus suber

Jorge A.P. Paiva , Pedro Fevereiro , Pedro Marques , José Carlos Rodrigues , Grégoire G. Le Provost et al.
BMC Proceedings, 2011, 5 (Suppl 7), pp.172
Article dans une revue hal-02649545 v1
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Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR

Saneyoshi Ueno , Christophe Klopp , Céline Noirot , Valérie V. Léger , Elodie Prince et al.
BMC Proceedings, 2011, 5 (Suppl. 7), pp.1-2. ⟨10.1186/1753-6561-5-S7-P20⟩
Article dans une revue hal-02641988 v1
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Comprehensive genetic dissection of wood properties in a widely-grown tropical tree: Eucalyptus

Jean-Marc J.-M. Gion , Audrey Carouché , Sylvie Deweer , Franck Bedon , Frédérique Pichavant et al.
BMC Genomics, 2011, 12, ⟨10.1186/1471-2164-12-301⟩
Article dans une revue hal-02651298 v1

Proteomics research on forest trees, the most recalcitrant and orphan plant species

Nieves Abril , Jean-Marc J.-M. Gion , Rene Kerner , Gerhard Müller-Starck , Rafael M. Navarro Cerrillo et al.
Phytochemistry, 2011, 72 (10), pp.1219-1242. ⟨10.1016/j.phytochem.2011.01.005⟩
Article dans une revue istex hal-02647709 v1

Comprehensive genetic dissection of wood properties in a widely-grown tropical tree: Eucalyptus

Jean-Marc Gion , Audrey Carouché , Sylvie Deweer , Franck Bedon , Frédérique Pichavant et al.
BMC Genomics, 2011, 12 (301), pp.1-19
Article dans une revue cirad-00845196 v1

Quand la génomique rencontre l’écologie

Pascal Simonet , Christophe Plomion , Francis Martin
Biofutur, 2011, 319, pp.26-29
Article dans une revue hal-02644602 v1
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Uniform selection as a primary force reducing population genetic differentiation of cavitation resistance across a species range

Jean-Baptiste J.-B. Lamy , Laurent Bouffier , Régis R. Burlett , Christophe Plomion , Hervé H. Cochard et al.
PLoS ONE, 2011, 6 (8), 12 p. ⟨10.1371/journal.pone.0023476⟩
Article dans une revue hal-00964845 v1
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A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study.

Jérôme J. Durand , Catherine Bodénès , Emilie Chancerel , Jean-Marc Frigerio , Giovanni Vendramin et al.
BMC Genomics, 2010, 11 (570), pp.570. ⟨10.1186/1471-2164-11-570⟩
Article dans une revue hal-00645935 v1
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<em>In vitro vs in silico</em> detected SNPs for the development of a genotyping array : what can we learn from a non-model species?

Camille Lepoittevin , Jean-Marc Frigerio , Pauline Garnier‐géré , Franck F. Salin , María-Teresa Cervera et al.
PLoS ONE, 2010, 5 (6), 9 p. ⟨10.1371/journal.pone.0011034⟩
Article dans une revue hal-02662512 v1
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(Not) Keeping the stem straight: a proteomic analysis of maritime pine seedlings undergoing phototropism and gravitropism

Raul Herrera , Catherine Krier , Céline C. Lalanne , El Hadji Maodo Ba , Alexia Stokes et al.
BMC Plant Biology, 2010, 10, pp.217. ⟨10.1186/1471-2229-10-217⟩
Article dans une revue hal-02664731 v1
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Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Saneyoshi Ueno , Grégoire Le Provost , Valérie Léger , Christophe Klopp , Céline Noirot et al.
BMC Genomics, 2010, 11, pp.650. ⟨10.1186/1471-2164-11-650⟩
Article dans une revue hal-00645933 v1

Palaeogenomics of plants: synteny-based modelling of extinct ancestors.

Michael Abrouk , Florent Murat , Caroline Pont , Joachim Messing , Scott Jackson et al.
Trends in Plant Science, 2010, 15 (9), pp.479-87. ⟨10.1016/j.tplants.2010.06.001⟩
Article dans une revue istex hal-00681093 v1

Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE

Delphine D. Vincent , Marie-Helene Balesdent , Julien Gibon , Stéphane Claverol , Delphine Lapaillerie et al.
Electrophoresis, 2009, 30 (23), pp.4118-4136. ⟨10.1002/elps.200900415⟩
Article dans une revue istex hal-02656973 v1

Leaf proteome analysis of eight Populus xeuramericana genotypes : genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins

Ludovic Bonhomme , Romain Monclus , Delphine D. Vincent , Sabine Carpin , Anne-Marie Lomenech et al.
Proteomics, 2009, 9 (17), pp.4121-4142. ⟨10.1002/pmic.200900047⟩
Article dans une revue hal-02666973 v1

Genomics of growth traits in forest trees

Dario Grattapaglia , Christophe Plomion , Matias Kirst , Ronald R. Sederoff
Current Opinion in Plant Biology, 2009, 12 (2), pp.148-156. ⟨10.1016/j.pbi.2008.12.008⟩
Article dans une revue hal-02667663 v1

Genetic variation and drought response in two Populus X euramericana genotypes through 2-DE proteomic analysis of leaves from field and glasshouse cultivated plants

Ludovic Bonhomme , R. Monclus , Delphine D. Vincent , Sabine Carpin , S. Claverol et al.
Phytochemistry, 2009, 70 (8), pp.988-1002. ⟨10.1016/j.phytochem.2009.05.013⟩
Article dans une revue istex hal-02656637 v1

Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue

Jorge Almiro Paiva , Marcelo Arnoldo Garces , A. Alves , Pauline Garnier‐géré , J.C. Rodrigues et al.
New Phytologist, 2008, 178 (2), pp.283-301. ⟨10.1111/j.1469-8137.2008.02379.x⟩
Article dans une revue hal-02655721 v1

Protein polymorphism between two Picea abies ecotypes as revealed by two-dimensional gel electrophoresis and tandem mass spectrometry

Cristina-Maria Valcu , Céline C. Lalanne , Gerhard Müller-Starck , Christophe Plomion , Katja Schlink
Journal of Heredity, 2008, 99 (4), pp.364-375. ⟨10.1093/jhered/esn007⟩
Article dans une revue hal-02665815 v1

Contrasting patterns of selection at Pinus pisaster Ait. drought stress candidate genes as revealed by genetic differentiation analyses

Emmanuelle Eveno , C. Collada , M.A. Guevara , Valérie V. Léger , A. Soto et al.
Molecular Biology and Evolution, 2008, 25 (2), pp.417-437. ⟨10.1093/molbev/msm272⟩
Article dans une revue hal-02657780 v1

Heat induced changes in protein expression profiles of Norway spruce (Picea abies) ecotypes from different elevations

Cristina-Maria Valcu , Céline C. Lalanne , Christophe Plomion , Katia Schlink
Proteomics, 2008, 8 (20), pp.4287-4302. ⟨10.1002/pmic.200700992⟩
Article dans une revue hal-02663853 v1

Plasticity of maritime pine (Pinus pinaster Ait.) wood forming tissues during a growing season.

Jorge Almiro Paiva , Pauline Garnier‐géré , J. C. Rodrigues , A. Alves , Sara Santos et al.
New Phytologist, 2008, 179 (4), pp.1080-1094. ⟨10.1111/j.1469-8137.2008.02536.x⟩
Article dans une revue hal-02657853 v1

Geographical diversity and genetic relationships among Cedrus species estimated by AFLP

Magida Bou Dagher-Kharrat , Stéphanie Mariette , Francois Lefèvre , Bruno Fady , Ghislaine Grenier-de March et al.
Tree Genetics and Genomes, 2007, 3 (3), pp.275-285. ⟨10.1007/s11295-006-0065-x⟩
Article dans une revue istex hal-02663957 v1

Improvement of Pinus pinaster Ait elite trees selection by combining near infrared spectroscopy and genetic tools

Denilson da Silva Perez , A. Guillemain , P. Alazard , Christophe Plomion , Philippe P. Rozenberg et al.
Holzforschung, 2007, 61 (6), pp.611-622. ⟨10.1515/HF.2007.118⟩
Article dans une revue istex hal-02667280 v1

Transcriptional changes in two types of pre-mycorrhizal roots and in ectomycorrhizas of oak microcuttings inoculated with Piloderma croceum

Patrick Frettinger , Jérémy Derory , Sylvie Hermann , Christophe Plomion , Frédéric Lapeyrie et al.
Planta, 2007, 225 (2), pp.331-340. ⟨10.1007/s00425-006-0355-4⟩
Article dans une revue istex hal-02658206 v1

Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers

Gabriele Bucci , Santiago C. González-Martínez , Grégoire G. Le Provost , Christophe Plomion , Maria Margarida Ribeiro et al.
Molecular Ecology, 2007, 16 (10), pp.2137-2153. ⟨10.1111/j.1365-294X.2007.03275.x⟩
Article dans une revue hal-02658068 v1
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A micromethod for high throughput RNA extraction in forest trees

Grégoire G. Le Provost , Raul Herrera , Jorge Almiro Paiva , Philippe Chaumeil , Franck F. Salin et al.
Biological Research, 2007, 40 (3), pp.291-297
Article dans une revue hal-02655724 v1

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

Christophe Plomion , Céline C. Lalanne , Stéphane Claverol , Hakim Meddour , Annegret Kohler et al.
Proteomics, 2006, 6 (24), pp.6509-6527. ⟨10.1002/pmic.200600362⟩
Article dans une revue istex hal-02663888 v1

A proteomic analysis of Spanish broom (Spartium junceum L.) root growing on a slope condition

Michela Di Michele , Donato Chiatante , Christophe Plomion , Gabriella Stefania Scippa
Plant Science, 2006, 170, pp.926 - 935. ⟨10.1016/j.plantsci.2005.12.020⟩
Article dans une revue istex hal-04943747 v1

A proteomic analysis of Spanish broom (Spartium junceum L.) root growing on a slope condition

Michela Di Michele , Donato Chiatante , Christophe Plomion , Gabriella Stefania Scippa
Plant Science, 2006, 170 (5), pp.926-935. ⟨10.1016/j.plantsci.2005.12.020⟩
Article dans une revue istex hal-02653160 v1

QTLs and candidates genes for wood properties in maritime pine (Pinus pinaster Ait.)

David Pot , José-Carlos Rodrigues , Philippe P. Rozenberg , Guillaume Chantre , Josquin Tibbits et al.
Tree Genetics and Genomes, 2006, 2 (1), pp.10-24. ⟨10.1007/s11295-005-0026-9⟩
Article dans une revue istex hal-02657101 v1

Transcriptome analysis of bud burst in sessile oak (Quercus petraea)

Jérémy Derory , Patrick P. Léger , Virginie V. Garcia , Jacques Schaeffer , Marie-Theres Hauser et al.
New Phytologist, 2006, 170 (4), pp.723-738. ⟨10.1111/j.1469-8137.2006.01721.x⟩
Article dans une revue hal-02666078 v1

Analysis of the distribution of markers classes in a genetic linkage map:a case study in Norway spruce (Picea abies karst)

Ivan Scotti , Andrea Burelli , Federica Cattonaro , David Chagné , John Fuller et al.
Tree Genetics and Genomes, 2005, 1 (3), pp.93-102. ⟨10.1007/s11295-005-0012-2⟩
Article dans une revue istex hal-01032033 v1

Quantitative trait loci mapping for vegetative propagation in pedunculate oak

Caroline Scotti-Saintagne , Evangelista Bertocchi , Teresa Barreneche , Antoine Kremer , Christophe Plomion
Annals of Forest Science, 2005, 62 (4), pp.369-374. ⟨10.1051/forest:2005032⟩
Article dans une revue hal-02680270 v1

The proteome of maritime pine wood forming tissue

Jean-Marc Gion , Céline Lalanne , Grégoire Le Provost , Hélène Ferry-Dumazet , Jorge Paiva et al.
Proteomics, 2005, 5, pp.3731-3751
Article dans une revue hal-00306580 v1

Advances in forest tree genomics

Christophe Plomion , Tom Richardson , John Mackay
New Phytologist, 2005, 166 (3), pp.713-717. ⟨10.1111/j.1469-8137.2005.01446.x⟩
Article dans une revue hal-02683211 v1

Proteomic analysis of differentially expressed proteins in hepatocellular carcinoma developed in patients with chronic viral hepatitis C

Jean-Frédéric Blanc , Céline C. Lalanne , Christophe Plomion , Jean-Marie Schmitter , Katell Bathany et al.
Proteomics, 2005, 5 (14), pp.3778 - 3789. ⟨10.1002/pmic.200401194⟩
Article dans une revue istex hal-02678671 v1

Nucleotide variation in genes involved in wood formation in two species

David Pot , Lisa Mcmillan , Craig Echt , Grégoire G. Le Provost , Pauline Garnier‐géré et al.
New Phytologist, 2005, 167 (1), pp.101-112. ⟨10.1111/j.1469-8137.2005.01417.x⟩
Article dans une revue hal-02677755 v1

Isolation and characterization of nuclear microsatellite loci in Pinus pinaster Ait

M.A. Guevara , David Chagné , M.H. Almeida , M. Byrne , C. Collada et al.
Molecular Ecology Notes, 2005, 5 (1), pp.57-59. ⟨10.1111/j.1471-8286.2004.00830.x⟩
Article dans une revue istex hal-02683031 v1

Advances in forest tree genomics

Christophe Plomion , T. Richardson , J. Mackay
New Phytologist, 2005, 166 (3), pp.713-717
Article dans une revue hal-02671732 v1
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Quantitative trait loci mapping for vegetative propagation in pedunculate oak

Caroline Scotti-Saintagne , Evangelista Bertocchi , Teresa Barreneche , Antoine Kremer , Christophe Plomion
Annals of Forest Science, 2005, 62 (4), pp.369-374
Article dans une revue hal-00883894 v1

The proteome of maritime pine wood forming tissue

Jean-Marc J.-M. Gion , Céline C. Lalanne , Grégoire G. Le Provost , Hélène Ferry-Dumazet , Jorge Almiro Paiva et al.
Proteomics, 2005, 5 (14), pp.3731-3751. ⟨10.1002/pmic.200401197⟩
Article dans une revue istex hal-02678286 v1

PROTICdb: a web-based application to store, track, query, and compare plant proteome data

Hélène Ferry-Dumazet , Gwenn Houel , Pierre Montalent , Luc Moreau , Olivier Langella et al.
Proteomics, 2005, 5, pp.2069-2081
Article dans une revue hal-00306584 v1
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Genomics applied to the study of adaptation in pine species

M.A. Guevara , A. Soto , Carmen Collada , Christophe Plomion , O. Savolainen et al.
Investigación Agraria, 2005, 14 (3), pp.292-306
Article dans une revue hal-02677702 v1

PROTICdb: a web-based application to store, track, query, and compare plant proteome data

Hélène Ferry Dumazet , Gwenn Houel , Pierre Montalent , Luc Moreau , Olivier Langella et al.
Proteomics, 2005, 5 (8), pp.2069-2081. ⟨10.1002/pmic.200401111⟩
Article dans une revue istex hal-02676901 v1

Identification of QTLs affecting adaptive traits in Castanea sativa Mill

M. Casasoli , David Pot , Christophe Plomion , M.C. Monteverdi , Teresa Barreneche et al.
Plant, Cell and Environment, 2004, 27 (9), pp.1088-1101. ⟨10.1111/j.1365-3040.2004.01214.x⟩
Article dans une revue hal-02681225 v1

Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L.

Caroline Scotti-Saintagne , Catherine Bodenes-Brezard Bodénès , Teresa Barreneche , Evangelista Bertocchi , Christophe Plomion et al.
TAG Theoretical and Applied Genetics, 2004, 109 (8), pp.1648-1659. ⟨10.1007/s00122-004-1789-3⟩
Article dans une revue istex hal-02681266 v1

Comparative mapping between Quercus and Castanea using simple-sequence repeats (SSRs)

Teresa Barreneche , M. Casasoli , Katharina Russell , A. Akkak , H. Meddour et al.
TAG Theoretical and Applied Genetics, 2004, 108 (3), pp.558-566
Article dans une revue hal-02678967 v1

Genetic resources in maritime pine (Pinus pinaster Aiton): molecular and quantitative measures of genetic variation and differentiation among maternal lineages

S.C. Gonzalez Martinez , S. Mariette , M.M. Ribeiro , C. Burban , Annie Raffin et al.
Forest Ecology and Management, 2004, 197 (1-3), pp.103-115. ⟨10.1016/j.foreco.2004.05.008⟩
Article dans une revue istex hal-02583015 v1

Comparative mapping between Quercus and Castanea using simple-sequence repeats (SSRs)

Teresa Barreneche , M. Casasoli , K. Russel , A. Akkak , H. Meddour et al.
TAG Theoretical and Applied Genetics, 2004, 108 (3), pp.558-566. ⟨10.1007/s00122-003-1462-2⟩
Article dans une revue istex hal-02679023 v1

Cross-species transferability and mapping of genomic and cDNA SSRs in pines

David Chagné , Philippe Chaumeil , Agnes Ramboer , Carmen Collada , Antonio Guevara et al.
TAG Theoretical and Applied Genetics, 2004, 19 (6), pp.1204-1214. ⟨10.1007/s00122-004-1683-z⟩
Article dans une revue istex hal-02681281 v1

Automated SNP detection in expressed sequence tags : statistical considerations and application to maritime pine sequences

Loick Le Dantec , David Chagné , David Pot , Olivier Cantin , Pauline Garnier‐géré et al.
Plant Molecular Biology, 2004, 54 (3), pp.461-470. ⟨10.1023/B:PLAN.0000036376.11710.6f⟩
Article dans une revue istex hal-02679200 v1

Distribution of genomic regions differentiating oak species assessed by QTL detection

Caroline Scotti-Saintagne , Catherine Bodenes-Brezard Bodénès , Teresa Barreneche , David Pot , Christophe Plomion et al.
Heredity, 2004, 92 (1), pp.20-30. ⟨10.1038/sj.hdy.6800358⟩
Article dans une revue hal-02678139 v1

Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences

Loïck Le Dantec , David Chagné , David Pot , Olivier Cantin , Pauline Garnier‐géré et al.
Plant Molecular Biology, 2004, 54, pp.461-470
Article dans une revue hal-00306578 v1

Identification of water-deficit responsive genes in maritime pine (Pinus pinaster Ait.) roots

Christian Dubos , Christophe Plomion
Plant Molecular Biology, 2003, 51 (2), pp.249-262
Article dans une revue hal-02673636 v1

Comparative genome and QTL mapping between maritime pine and loblolly pines

D. Chagné , G. Brown , Céline Lalanne , C. Madur , D. Pot et al.
Molecular Breeding, 2003, 12 (3), pp.185-195
Article dans une revue hal-02673160 v1

Analysis of protein expression along the normal to tension wood gradient in Eucalyptus gunnii

Christophe Plomion , Cédric Pionneau , H. Bailleres
Holzforschung, 2003, 57 (4), pp.353-358
Article dans une revue hal-02672696 v1

Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , G. Le Provost , D. Pot , Franck Salin , C. Lalane et al.
Tree Physiology, 2003, 23, pp.169-179
Article dans une revue hal-02670722 v1
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Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , Grégoire Le Provost , David Pot , Franck Salin , Céline Lalanne et al.
Tree Physiology, 2003, 23 (3), pp.169-179. ⟨10.1093/treephys/23.3.169⟩
Article dans une revue hal-04200586 v1
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Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein

Grégoire Le Provost , Jorge Paiva , David Pot , Jean Brach , Christophe Plomion
Planta, 2003, 217, pp.820 - 830. ⟨10.1007/s00425-003-1051-2⟩
Article dans une revue hal-04200603 v1
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Inheritance and diversity of simple sequence repeat (SSR) microsatellite markers in various families of <em>Picea abies</em>

R. Yazdani , Ivan Scotti , G. Jansson , Christophe Plomion , G. Mathur
Hereditas, 2003, 138, pp.219-227. ⟨10.1034/j.1601-5223.2003.01524.x⟩
Article dans une revue istex hal-02681555 v1

Marker trait association for autumn cold acclimation and growth rythm in Pinus sylvestris

R. Yazdani , J.E. Nilsson , Christophe Plomion , G. Mathur
Scandinavian Journal of Forest Research, 2003, 18 (1), pp.29-38
Article dans une revue hal-02673635 v1
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Report on the Forest Trees Workshop at the Plant and Animal Genome Conference

Christophe Plomion , Janice Cooke , Tom Richardson , John Mackay , Gerald Tuskan
Comparative and Functional Genomics, 2003, 4 (2), pp.229-238. ⟨10.1002/cfg.262⟩
Article dans une revue hal-02679047 v1

Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein

Grégoire G. Le Provost , Jorge Almiro Paiva , D. Pot , J. Brach , Christophe Plomion
Planta, 2003, 217, pp.820-830
Article dans une revue hal-02678413 v1
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Genetic control of pulp and timber properties in maritime pine (Pinus pinaster Ait.)

David Pot , Guillaume Chantre , Philippe Rozenberg , José Rodrigues , Gwynn Jones et al.
Annals of Forest Science, 2002, 59 (5-6), pp.563-575. ⟨10.1051/forest:2002042⟩
Article dans une revue hal-00881908 v1
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A high density genetic map of maritime pine based on AFLPs

David Chagné , Céline Lalanne , Delphine Madur , Satish Kumar , Jean-Marc Frigério et al.
Annals of Forest Science, 2002, 59 (5-6), pp.627-636. ⟨10.1051/forest:2002048⟩
Article dans une revue hal-00881915 v1

Combining proteomic and genetic studies in plants

Hervé Thiellement , M. Zivy , Christophe Plomion
Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2002, 782, pp.137-149
Article dans une revue hal-02676072 v1

Comparison of genetic diversity estimates within and among populations of maritime pine using chloroplast simple-sequence repeat and amplified fragment length polymorphism data

M.M. Ribeiro , S. Mariette , G.G. Vendramin , A.E. Szmidt , Christophe Plomion et al.
Molecular Ecology, 2002, 11 (5), pp.869-877. ⟨10.1046/j.1365-294X.2002.01490.x⟩
Article dans une revue istex hal-02580648 v1
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Foreword

Christophe Plomion , C. Cahalan
Annals of Forest Science, 2002, 59 (5-6), pp.461-461. ⟨10.1051/forest:2002110⟩
Article dans une revue hal-00884166 v1
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Osmotic adjustment in Pinus pinaster cuttings in response to a soil drying cycle

Anne Nguyen-Queyrens , Paulo Costa , Denis Loustau , Christophe Plomion
Annals of Forest Science, 2002, 59 (7), pp.795-799. ⟨10.1051/forest:2002067⟩
Article dans une revue hal-00883670 v1

Origin identification of maritime pine stands in France using chloroplast simple-sequence repeats

M.M. Ribeiro , G. Leprovost , Sophie Gerber , G.G. Vendramin , M. Anzidei et al.
Annals of Forest Science, 2002, 59 (1), pp.53-62. ⟨10.1051/forest:2001005⟩
Article dans une revue hal-02580447 v1

Osmotic adjustment in Pinus pinaster cuttings in response to a soil drying cycle

A. Nguyen-Queyrens , P. Costa , Denis Loustau , Christophe Plomion
Annales des sciences forestières, 2002, 59, pp.795-799
Article dans une revue hal-02676167 v1
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Genetic parameters and QTL analysis of d13C and ring width in maritime pine

Oliver Brendel , D. Pot , Christophe Plomion , Philippe Rozenberg , Jean-Marc Guehl
Plant, Cell and Environment, 2002, 25, pp.945-953. ⟨10.1046/j.1365-3040.2002.00872.x⟩
Article dans une revue hal-02676160 v1
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What can nuclear microsatellites tell us about maritime pine genetic resources conservation and provenance certification strategies?

Jérémy Derory , Stéphanie Mariette , Santiago Gonzaléz-Martínez , David Chagné , Delphine Madura et al.
Annals of Forest Science, 2002, 59 (5-6), pp.699-708. ⟨10.1051/forest:2002058⟩
Article dans une revue hal-00881936 v1
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Les Biotechnologies chez les arbres forestiers.

Gilles Pilate , Marc Pâques , Jean-Charles Leple , Christophe Plomion
Revue forestière française, 2002, 54 (2), pp.161-180. ⟨10.4267/2042/4910⟩
Article dans une revue hal-03449350 v1

Comparison of genetic diversity estimates within and among populations of maritime pine using chloroplast simple-sequence repeat and amplified fragment lenght polymorphism data

M.M. Ribeiro , Stéphanie Mariette , G.G. Vendramin , A.E. Szmidt , Christophe Plomion et al.
Molecular Ecology, 2002, 11, pp.869-877
Article dans une revue hal-02676166 v1

Candidate genes and QTLs for sugar and organic acid content in peach (Prunus persica (L.) Batsch)

Christelle Etienne , Christophe Rothan , Annick Moing , Christophe Plomion , Catherine Bodénès et al.
TAG Theoretical and Applied Genetics, 2002, 105, pp.145-159. ⟨10.1007/s00122-001-0841-9⟩
Article dans une revue istex hal-02676287 v1

Microsatellite markers for Pinus pinaster Ait.

Stéphanie Mariette , D. Chagné , Stephane Decroocq , G.G. Vendramin , Céline Lalanne et al.
Annales des sciences forestières, 2001, 58, pp.203-206
Article dans une revue hal-02675309 v1
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Wood Formation in Trees

Christophe Plomion , Grégoire Leprovost , Alexia Stokes
Plant Physiology, 2001, 127, pp.1513 - 1523. ⟨10.1104/pp.010816⟩
Article dans une revue hal-04200612 v1

Microsatellite primers for Sorbus torminalis and related species

S. Oddou-Muratorio , C. Aligon , Stephane Decroocq , Christophe Plomion , T. Lamant et al.
Molecular Ecology Notes, 2001, 1, pp.297-299
Article dans une revue hal-02676636 v1

Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers

Stéphanie Mariette , D. Chagné , C. Lézier , Patrick Pastuszka , Annie Raffin et al.
Heredity, 2001, 86, pp.469-479
Article dans une revue hal-02676475 v1

Pollen contamination in a maritime pine polycross seed orchard and certification of improved seeds using chloroplast microsatellites

Christophe Plomion , G. Leprovost , D. Pot , Giovanni Giuseppe Vendramin , Sophie Gerber et al.
Canadian Journal of Forest Research, 2001, 31, pp.1816-1825
Article dans une revue hal-02674747 v1

Drought differentially affects expression of a PR-10 protein, in needles of maritime pine (Pinus pinaster Ait.) seedlings

Christian Dubos , Christophe Plomion
Journal of Experimental Botany, 2001, 52 (358), pp.1143-1144
Article dans une revue hal-02669969 v1
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Pollen contamination in a maritime pine polycross seed orchard and certification of improved seeds using chloroplast microsatellites

Christophe Plomion , Grégoire Le Provost , David Pot , Giovanni Giuseppe Vendramin , Sophie Gerber et al.
Canadian Journal of Forest Research, 2001, 31, pp.1816-1825. ⟨10.1139/cjfr-31-10-1816⟩
Article dans une revue hal-04200575 v1
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Microsatellite markers for Pinus pinaster Ait.

Stéphanie Mariette , David Chagné , Stéphane Decroocq , Giuseppe Vendramin , Céline Lalanne et al.
Annals of Forest Science, 2001, 58 (2), pp.203-206. ⟨10.1051/forest:2001119⟩
Article dans une revue hal-00884174 v1

A genetic map of Maritime pine based on AFLP, RAPD and protein markers

P. Costa , D. Pot , Christian Dubos , J.M. Frigerio , Cédric Pionneau et al.
TAG Theoretical and Applied Genetics, 2000, 100, pp.39-48
Article dans une revue hal-02691111 v1

Compression wood-responsive proteins in developing xylem of maritime pine (Pinus pinaster Ait.)

Christophe Plomion , Cédric Pionneau , J. Brach , P. Costa , H. Bailleres
Plant Physiology, 2000, 123, pp.959-969
Article dans une revue hal-02696160 v1

Two genes encoding distinct cytosolic glutamine synthetases are closely linked to the pine genome

C.A. Saez , R. Munoz-Chapuli , Christophe Plomion , J.M. Frigerio , F.M. Canovas
FEBS Letters, 2000, 477, pp.237-243
Article dans une revue hal-02693260 v1

Mapping candidate genes in Eucalyptus with emphasis on lignification genes

J.M. Gion , P. Rech , Jacqueline Grima Pettenati , D. Verhaegen , Christophe Plomion
Molecular Breeding, 2000, 6, pp.441-449
Article dans une revue hal-02697368 v1

Mapping candidate genes in Eucalyptus with emphasis on lignification genes

Jean-Marc Gion , Philippe Rech , Jacqueline Grima Pettenati , Daniel Verhaegen , Christophe Plomion
Molecular Breeding, 2000, 6, pp.441-449
Article dans une revue cirad-00845442 v1

AFLP mapping and detection of quantitative trait loci (QTLs) for economically important traits in Pinus sylvestris: a preliminary study

E. Lerceteau , Christophe Plomion , Bo Henrik Andersson
Molecular Breeding, 2000, 6, pp.451-458
Article dans une revue hal-02689916 v1

Improved AFLP analysis of tree species

M.T. Cervera , D. Remington , J.M. Frigerio , Véronique Storme , B. Ivens et al.
Canadian Journal of Forest Research, 2000, 30, pp.1608-1616
Article dans une revue hal-02693508 v1

Developing SSCP markers in two Pinus species

Christophe Plomion , P. Hurme , J.M. Frigerio , M. Ridolfi , D. Pot et al.
Molecular Breeding, 1999, 5 (1), pp.21-31
Article dans une revue hal-02688015 v1

Genetic analysis of needle proteins in Maritime pine. 2. Variation of protein accumulation

P. Costa , Christophe Plomion
Silvae Genetica, 1999, 48 (3-4), pp.146-150
Article dans une revue hal-02689441 v1

Proteomics for genetic and physiological studies in plants

Hervé Thiellement , Nasser Bahrman , Catherine Damerval , Christophe Plomion , Michel Rossignol et al.
Article dans une revue hal-04169780 v1

Separation and characterization of needle and xylem maritime pine proteins

P. Costa , Cédric Pionneau , G. Bauw , Christian Dubos , N. Bahrmann et al.
Electrophoresis, 1999, 20 (4-5), pp.1098-1108
Article dans une revue hal-02687346 v1
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Quantitative trait dissection analysis in Eucalytus using RAPD markers: 2. Linkage disequilibrium in a factorial design between E. urophylle and E. Grandis.

Daniel Verhaegen , Christophe Plomion , Mireille Poitel , Paulo Costa , Antoine Kremer
Forest genetics, 1998, 5 (1), pp.61-69
Article dans une revue cirad-00845393 v1

Water-deficit-responsive proteins in maritime pine

P. Costa , Nasser Bahrman , J.M. Frigerio , Antoine Kremer , Christophe Plomion
Plant Molecular Biology, 1998, 38, pp.587-596
Article dans une revue hal-02692390 v1

Quantitative trait dissection analysis in Eucalyptus using RAPD markers : 2. Linkage disequilibrium in a factorial design between E.urophylla and E. grandis

D. Verhaegen , Christophe Plomion , M. Poitel , P. Costa , Antoine Kremer
Tree seed working group news bulletin-Canadian Forest Genetics Association, 1998, 5 (1), pp.61-69
Article dans une revue hal-02698968 v1

A genetic linkage map of Quercus robur L. (pedunculate oak) based on RAPD, scar, microsatellite, minisatellite, isozyme and 5S rDNA markers

Teresa Barreneche , Catherine Bodénès , Christian Lexer , J.F. Trontin , S. Fluch et al.
TAG Theoretical and Applied Genetics, 1998, 97, pp.1090-1103
Article dans une revue hal-02694736 v1

Genetic analysis of needle proteins in maritime pine. l. Mapping dominant and codominant protein markers assayed on diploid tissue, in a haploid-bases genetic map

Christophe Plomion , C. Costa , N. Bahrmn , J.M. Frigerio
Silvae Genetica, 1997, 46 (2-3), pp.161-165
Article dans une revue hal-02688963 v1

Quantitative trait dissection analysis in Eucalyptus using RAPD markers : 1. Detection of QTL in interspecific hybrid progeny, stability of QTL expression across differnet ages

D. Verhaegen , Christophe Plomion , J.M. Gion , M. Poitel , P. Costa et al.
TAG Theoretical and Applied Genetics, 1997, 95 (4), pp.597-608
Article dans une revue hal-02690381 v1

Integrated genetic mapping of 64 rat microsatellite markers from different sources

Hélène Courvoisier , Marie-Thérèse H Bihoreau , Dominique Gauguier , Christophe Plomion , Pierre Mormède et al.
Mammalian Genome, 1997, 8 (4), pp.282-283. ⟨10.1007/s003359900411⟩
Article dans une revue istex hal-02567217 v1

Contribution of two-dimensional electrophoresis of proteins to maritime pine genetics

Nasser Bahrman , Christophe Plomion , R.J. Petit , Antoine Kremer
Annales des sciences forestières, 1997, 54 (3), pp.225-236
Article dans une revue hal-02685875 v1
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Contribution of two-dimensional electrophoresis of proteins to maritime pine genetics

N Bahrman , Christophe Plomion , Rj Petit , A Kremer
Annales des sciences forestières, 1997, 54 (3), pp.225-236
Article dans une revue hal-00883144 v1

Genetic determinism of delta3-carene in maritime pine using RAPD markers

Christophe Plomion , A. Yani , A. Marpeau
Genome, 1996, 39, pp.1123-1127
Article dans une revue hal-02691107 v1

Genetic mapping in Eucalyptus urophylla and Eucalyptus grandis using RAPD markers

D. Verhaegen , Christophe Plomion
Genome, 1996, 39, pp.1051-1061
Article dans une revue hal-02691208 v1

Genetic mapping in Eucalyptus urophylla and Eucalyptus grandis using RAPD markers.

D. Verhaegen , Christophe Plomion
Genome, 1996, 39 (6), pp.1051-1061
Article dans une revue cirad-00845398 v1
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Utilisation des marqueurs moléculaires dans les programmes d'amélioration génétique des arbres forestiers : exemple du pin maritime et de l'eucalyptus

Christophe Plomion , Cé Durel , D Verhaegen
Annales des sciences forestières, 1996, 53 (4), pp.819-848
Article dans une revue hal-00883098 v1
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Détermination des effets moyens des allèles à un QTL spécifique détecté par la stratégie du pseudo-testcross.

Christophe Plomion , Charles Eric Durel
Genetics Selection Evolution, 1996, 28 (3), pp.223-235
Article dans une revue hal-02689140 v1

Genetic dissection of height in maritime pine seedlings raised under accelerated growth conditions

Christophe Plomion , Charles Eric Durel , D.M. O'Malley
TAG Theoretical and Applied Genetics, 1996, 93 (5-6), pp.849-858
Article dans une revue hal-02687392 v1
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Estimation of the average effects of specific alleles detected by the pseudo-testcross QTL mapping strategy

Christophe Plomion , Cé Durel
Genetics Selection Evolution, 1996, 28 (3), pp.223-235
Article dans une revue hal-00894132 v1

Utilisation des marqueurs moléculaires dans les programmes d'amélioration génétique des arbres forestiers : exemple du pin maritime et de l'eucalyptus

Christophe Plomion , Charles Eric Durel , D. Verhaegen
Annales des sciences forestières, 1996, 53 (4), pp.819-848
Article dans une revue hal-02696080 v1

Recombination rate differences for pollen parents and seed parents in Pinus pinaster

Christophe Plomion , D.M. O'Malley
Heredity, 1996, 77, pp.341-350
Article dans une revue hal-02689814 v1

Sélection assistée par marqueurs chez les arbres forestiers

Christophe Plomion
Informations forêt AFOCEL, 1996, 3, pp.1-5
Article dans une revue hal-02686628 v1

Genetic analysis using trans-dominant linked markers in an F2 family

Christophe Plomion , B.H. Liu , D.M. O'Malley
TAG Theoretical and Applied Genetics, 1996, 93 (8), pp.1083-1089
Article dans une revue hal-02695790 v1

Genomic mapping in Pinus pinaster (maritime pine) using RAPD and protein markers

Christophe Plomion , Nasser Bahrman , Charles Eric Durel , D.M. O'Malley
Heredity, 1995, 74, pp.661-668
Article dans une revue hal-02700644 v1

Genome expression for quantitative traits in maritime pine

Christophe Plomion
Dendrome, 1995, 2 (1), pp.4
Article dans une revue hal-02702638 v1

Genomic analysis in maritime pine (Pinus pinaster). Comparison of two RAPD maps using selfed and open-pollinated seeds of the same individual

Christophe Plomion , D.M. O'Malley , Charles Eric Durel
TAG Theoretical and Applied Genetics, 1995, 90, pp.1028-1034
Article dans une revue hal-02702034 v1

Genotype x environment interaction for root traits in maize, as analysed with factorial regression models

Christophe Plomion , N. Harzic
Euphytica, 1995, 81, pp.85-92
Article dans une revue hal-02709769 v1
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Plant mutations: slaying beautiful hypotheses by surprising evidence

Niklas Tysklind , Sylvain Schmitt , Patrick Heuret , Valérie Troispoux , Mélanie Beraud et al.
EVOLTREE Conference 2023 - Resilient Forests for the Future, UNITBV, Brașov, Romania, Sep 2023, Brasov, Romania. ⟨10.31926/evoltree.2023⟩
Communication dans un congrès hal-04664198 v1

Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso et al.
2. EvolTree Conference, Alexandru Lucian Curtu, UNITBV ; Elena Ciocirlan, UNITBV ; Nicolae Sofletea, UNITBV, Sep 2023, Brasov, Romania. ⟨10.1101/2023.04.07.536008⟩
Communication dans un congrès hal-04207231 v1

Genome-wide association study of leaf specialized metabolites in sessile oak (Quercus petraea) provenances.

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Céline Lalanne , Annick Moing et al.
First EVOLTREE Conference 2021: Genomics and Adaptation in Forest Ecosystems, Christian Rellstab, WSL; Felix Gugerli, WSL; Susanne Senn-Raschle, WSL, Sep 2021, ONLINE, Switzerland
Communication dans un congrès hal-04144594 v1
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Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea)

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso et al.
Congress of the European Society for Evolutionary Biology (ESEB), Lukáš Kratochvíl, Aug 2019, Prague (Czech Republic), Czech Republic
Communication dans un congrès hal-04144342 v1

In-Sylva-France a new research infrastructure for forest adaptation and silvicultural innovations

Christian Pichot , Laurent Saint‐andré , Alain Bouvet , Christine Deleuze , François Ehrenmann et al.
IUFRO World Congress 2019 "Forest Research and Cooperation for Sustainable Development", embrapa, Sep 2019, Curitiba, Brazil. 768 p., ⟨10.4336/2019.pfb.39e201902043⟩
Communication dans un congrès hal-04188784 v1

Epigenetics in forest trees : role in plasticity, adaptation and potential implications for breeding in a context of climate change (EPITREE).

Stéphane Maury , Régis Fichot , M.D. D Sow , Alain Delaunay , I Le Jan et al.
IUFRO Tree Biotechnology, Jun 2019, Raleigh NC, United States
Communication dans un congrès hal-03523238 v1

Les faux de Verzy: une ressource génétique atypique à décoder et conserver

Brigitte Musch , Alexis A. Ducousso , Bénédicte Le Guerroué , Anthony Dubois , Christophe Plomion
Parc Naturel Régional (PNR) de la Montagne de Reims, Jun 2018, Verzy, France
Communication dans un congrès hal-03326238 v1
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Daily stem radial fluctuations in Eucalyptus reveals the dynamic of the genetic determinants of trees response to environment

Jérôme Bartholome , André Mabiala , Régis Burlett , Didier Bert , Jean-Charles Leplé et al.
Managing eucalypt plantations under global changes; IUFRO 2.08.03 Improvement and culture of Eucalyptus, Sep 2018, Montpellier, France
Communication dans un congrès hal-02734817 v1
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An integrated information system dedicated to oak genomics and genetics

Joëlle Amselem , Nicolas Francillonne , Célia Michotey , Thomas Letellier , Jean-Marc Aury et al.
PAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides
Communication dans un congrès hal-01839185 v1

Genetic architecture of water use efficiency across two oak species and their hybrids

Oliver Brendel , Benjamin Brachi , Catherine Bodenes-Brezard , Patricia Faivre-Rampant , Christophe Plomion
Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shanghai, China
Communication dans un congrès hal-02786594 v1

Discovering genes involved in ecological preference in European white oaks using an RNAseq approach

Grégoire Le Provost , Isabelle Lesur , Céline Lalanne , Karine Labadie , Jean Marc Aury et al.
Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shangai, China
Communication dans un congrès hal-03351960 v1
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Genetic Diversity of Water Use Efficiecy in forest trees

Didier Le Thiec , Jean-Marc Guehl , Antoine Kremer , Christophe Plomion , Catherine Bodénès et al.
Water use efficiency under drought, IUFRO 125th Anniversary congress 2017 - Side event, Sep 2017, Champenoux, France
Communication dans un congrès hal-04651347 v1
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Forest tree GnpIS: an information system dedicated to forest tree genetics, genomics and phenomics

Célia Michotey , Christel Anger , François Ehrenmann , Odile Rogier , Véronique V. Jorge et al.
IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France
Communication dans un congrès hal-02740283 v1

Identification of recent secondary contacts between four morphologically distinct oak species

Thibault Leroy , Camille Roux , Catherine Bodenes-Brezard Bodénès , Jean-Marc Aury , Antoine Kremer et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02743580 v1
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Use of molecular markers to enhance genetic gains in the maritime pine breeding program

Laurent Bouffier , Marjorie Vidal , Jérôme Bartholomé , Christophe C. Boury , Annie A. Raffin et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741050 v1

Daily stem radial fluctuations in Eucalyptus reveal the dynamic of the genetic determinants of trees response to environment

Jérôme Bartholomé , A. Mabiala , Régis R. Burlett , Didier Bert , Christophe Plomion et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741235 v1

Oak genome sequencing and evolution

Jerome J. Salse , Jean Marc Aury , Florent Murat , Sébastien Faye , Karine Labadie et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741698 v1

Discovering genes involved in ecological speciation in European white oaks using an RNAseq approach

Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur , Céline C. Lalanne , Karine Labadie , Jean Marc Aury et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741267 v1

Annotation of the oak genome sequence and associated bioinformatic resources

Joelle J. Amselem , Jean Marc Aury , Nicolas Francillonne , Tina Alaeitabar , Corinne da Silva et al.
IUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741128 v1

Waterlogged oak wood from across Europe provides new source for tree ancient DNA

Stefanie Wagner , Frédéric F. Lagane , Emilie E. Chancerel , Yves Billaud , Willy Tegel et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741339 v1
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Evidence of intense chromosomal shuffling during conifer evolution

Marina de Miguel , Jérôme Bartholome , François Ehrenmann , Florent Murat , Yoshinari Moriguchi et al.
ProCoGen final open conference, Promoting Conifer Genomic Resources, Nov 2015, Orléans, France. 75 p
Communication dans un congrès hal-02741312 v1
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Back to nature: candidate genes, population genomics and prediction of maladaptation in natural populations

Santiago C. González-Martínez , Ricardo Alia , Katharina B. Budde , Andrew J. Eckert , Delphine Grivet et al.
ProCoGen final open conference, Promoting Conifer Genomic Resources, Nov 2015, Orléans, France. 75 p
Communication dans un congrès hal-02743028 v1
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Integration of molecular tools into the maritime pine breeding program in France

Jérôme Bartholomé , Marjorie Vidal , Annie Raffin , Isabelle Lesur Kupin Lesur , Christophe C. Boury et al.
ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p
Communication dans un congrès hal-02738881 v1
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Can genomics simplify current breeding without the cost of a genome-wide approach?

Laurent Bouffier , Marjorie Vidal , Jérôme Bartholomé , Christophe C. Boury , Christophe Plomion
ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p
Communication dans un congrès hal-02743400 v1

Tolérance au Cu chez Agrostis capillaris L. : du phénotype aux déterminants moléculaires dans le protéome soluble foliaire

Elena Hego , Sebastien Vilain , Aurélien Barré , Stéphane Claverol , Jean-William Dupuy et al.
5. Séminaire d'Ecotoxicologie de l'INRA (Ecotox), Nov 2014, Biarritz, France. 66 p
Communication dans un congrès hal-02744366 v1
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Control of chilling requirement and flowering time in trees; linking genetics and genomics to understand these complex phenological traits in deciduous fruit and forest trees

Albert G. Abbott , Stéphanie Mariette , Lucia Andreini , Tatyana Zhebentyayeva , Zongrang Liu et al.
Plant and Animal Genome XXII Conference, Jan 2014, San Diego, United States
Communication dans un congrès hal-02798021 v1

The genetics of drought stress adaptation : emphasis on water use efficiency and cavitation resistance

Christophe Plomion , Laurent Bouffier , Oliver Brendel , Emilie E. Chancerel , Hervé H. Cochard et al.
Tree Biotechnology Conference "Forest Biotechnology: Meeting the Needs of a Changing World", International Union of Forest Research Organisations (IUFRO). AUT., May 2013, Asheville, United States
Communication dans un congrès hal-00964762 v1
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Polymix breeding with paternity analysis: a maritime pine case study

Maël Ruby , Christophe Plomion , Luc Harvengt , Annie A. Raffin , Laurent Bouffier
Meeting of IUFRO, Feb 2013, Jacksonville, United States
Communication dans un congrès hal-02803424 v1

Proteomic characterization of phenotypic plasticity between metallicolous and non-metallicolous populations of Agrostis capillaris L. exposed to Cu.

Elena Hego , Clémence Bes , Franck F. Bedon , Michel Mench , P.M. Palagi et al.
12. International Conference on the Biogeochemistry of Trace Elements, International Conference on the Biogeochemistry of Trace Elements (ICOBTE). INT., Jun 2013, Athens, United States. 1 p
Communication dans un congrès hal-02810674 v1
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Establishment of a composite SNP linkage map for maritime pine

Emilie E. Chancerel , J. Endelman , Laurent Bouffier , Christophe Plomion
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02747973 v1

Proteomic characterization of phenotypic plasticity between metallicolous and non-metallicolous populations of Agrostis capillaris L. exposed to Cu

Elena Hego , Clémence Bes , Franck F. Bedon , Michel Mench , Patricia Palagi et al.
9. International Phytotechnology Society (IPS), Hasselt University (UHasselt). Hasselt, BEL., Sep 2012, Hasselt, Belgium
Communication dans un congrès hal-02748097 v1

Identification of genes involved in bud dormancy in sessile oak (Quercus petraea Matt. Liebl) using RNA-seq

Grégoire G. Le Provost , Ueno Saneyoshi , Christophe Klopp , Jean-Charles Leplé , Jérémy Derory et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02809075 v1

Sequencing and analysis of the oak transcriptome using RNA-seq technologies

Isabelle Lesur Kupin Lesur , Grégoire G. Le Provost , Céline C. Lalanne , François Ehrenmann , Céline Noirot et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02806071 v1
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The genetics of water‐use efficiency in maritime pine and its relation to growth

Elisa E. Marguerit , Laurent Bouffier , Emilie E. Chancerel , Christophe C. Boury , P. Costa et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology: New synergies to tackle the impact of climate change in the 21st century", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02749305 v1
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Genetic association for growth and biomass in maritime pine

J.A. Cabezas , S.C. González‐martínez , C. Collada , Camille Lepoittevin , Christophe C. Boury et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02748063 v1

SUBERGENE: Developing genomics resources for cork-oak (Q. suber L.)

Jorge Almiro Paiva , Pedro Fevereiro , Pedro Marques , José Carlos Rodrigues , Grégoire G. Le Provost et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 2 p
Communication dans un congrès hal-02809590 v1

Development of high density linkage maps in European oak for multi-objective genetic applications

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Camille Lepoittevin , François Ehrenmann , Isabelle Lesur Kupin Lesur et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02805716 v1
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What do we know about the genetic determinism of cavitation resistance in maritime pine?

Jean-Baptiste J.-B. Lamy , Laurent Bouffier , Sylvain S. Delzon , Régis R. Burlett , Hervé H. Cochard et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02744841 v1

Development of genomic resources to study the structure, function and evolution of the oak genome

Christophe Plomion , Joelle J. Amselem , Jean-Marc Aury , Catherine Bodenes , Emilie Chancerel et al.
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-01019850 v1

Genomic scan of Interspecific divergence in european white oaks

Laure Villate , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Camille Lepoittevin , Christophe Plomion et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02804203 v1

Sequencing allelic BACs for exploring the level of genome heterozygosity in oak

Patricia P. Faivre-Rampant , Nathalie N. Pavy , Isabelle I. Le Clainche , Aurelie A. Canaguier , Cecile C. Guichard et al.
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-00964429 v1
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Breeding poplars with durable resistance to Melampsora larici-populina leaf rust : a multidisciplinary approach to understand and delay pathogen adaptation

Arnaud A. Dowkiw , Catherine Bastien , Véronique V. Jorge , Marc M. Villar , Elodie Voisin et al.
4. International Workshop on the Genetics of Host-Parasite Interactions in Forestry : "Disease and Insect Resistance in Forest Trees", United States Department of Agriculture - USDA (USA) (USDA). Forest service, Ville service, USA., Jul 2011, Eugene, Oregon, United States. 112 p
Communication dans un congrès hal-02748005 v1
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Maritime pine (Pinus pinaster) de novo transcriptome assembly

Philippe Label , Céline Noirot , Grégoire G. Le Provost , María-Teresa Cervera , Christophe Plomion et al.
3. workshop on "Statistical challenges on the 1000€ genome sequences in plants";StatSeq'2011, Apr 2011, Toulouse, France
Communication dans un congrès hal-02750183 v1

Adaptation of forest trees to climate change

Christophe Plomion , Ivan Scotti , Sylvain Delzon , Jean-Marc Gion
IUFRO TreeBiotech2011 "From genomes to integration and delivery", Jun 2011, Bahia, Brazil
Communication dans un congrès hal-01032435 v1

Development of a bac library and bac end sequencing for pedunculate oak (Quercus robur L.) : new tools for oak genome studies

Patricia P. Faivre-Rampant , Frederique Bitton , Clément Boussardon , Catherine Bodenes-Brezard , Emilie E. Chancerel et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753048 v1

Comparative genetic mapping between oak (Quercus) and chestnut (Castanea) species

Catherine Bodenes-Brezard Bodénès , Jérôme J. Durand , Emilie E. Chancerel , Fiorella Villani , Claudia Mattioni et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02754603 v1

Bioinformatic analysis of Sanger and 454 ESTs in oak

Saneyoshi S. Ueno , Grégoire G. Le Provost , Valérie V. Léger , Christophe Klopp , Celine C. Noirot et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain. pp.73
Communication dans un congrès hal-00964385 v1

Identification and functional analysis of Magnaporthe oryzae effectors

Cecile Ribot , Stella Cesari , Judith Hirsch , D. Vincent , M.J. Gagey et al.
8. Rencontres de Phytopathologie-Mycologie de la Société Française de Phytopathologie (SFP), Jan 2010, Aussois, France
Communication dans un congrès hal-02755363 v1

Leaf proteome analysis of eight Populus × euramericana genotypes: genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins

Ludovic Bonhomme , Delphine D. Vincent , Sabine Carpin , Christophe Plomion , Franck F. Brignolas et al.
5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy
Communication dans un congrès hal-02754742 v1

Phenotypic and molecular plasticity of two eucalyptus clones in response to water deficit

Emilie Villar , Guillaume Coat , Andréas Ndeko , André Mabiala , Maryline Laurans et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02751768 v1

Selective pressures between oaks and their obligate fungal parasite causing powdery mildew

Marie Laure M. L. Desprez Loustau , Thibaut Decourcelle , Sylvain S. Delzon , Christian Cyril Dutech , Nicolas Feau et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755832 v1

Can nucleotide diversity patterns in maritime pine (Pinus pinaster Aiton.) wood formation candidate genes be explained by demography or selection?

Camille Lepoittevin , Christophe Plomion , Pauline Garnier‐géré
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02751095 v1
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Lecture de la plasticité des arbres forestiers à partir du matériau bois

Laurent Bouffier , Jean-Marc Gion , Anne-Sophie Sergent , Leopoldo Sanchez Rodriguez , Philippe P. Rozenberg et al.
Colloque national d'écologie scientifique, Sep 2010, Montpellier, France
Communication dans un congrès hal-02756179 v1

Genome scanning of regions showing divergent evolution between white oaks (Quercus petraea (matt.) Liebl. and Q.robur l.) : new insights from the oak allelic resequencing project

Pauline Garnier‐géré , Tiange Lang , Pierre P. Abadie , Thibaut Decourcelle , Valérie V. Léger et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753045 v1
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PROTIC workshop: A bioinformatics environment for proteome data validation, analysis and integration

Renaud Flores , Johann J. Joets , Olivier Langella , Benoit B. Valot , Michel M. Zivy et al.
Plant Genomics seminar 2010, Mar 2010, Pont Royal en Provence, France
Communication dans un congrès hal-02758409 v1
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POPSEC : molecular bases of acclimation to water deficit in poplar

Marie-Béatrice Bogeat-Triboulot , David Cohen , Didier Le Thiec , Sandrine Balzergue , Marie-Laure Martin-Magniette et al.
Séminaire Génoplante, Mar 2010, Mallemort-en-Provence, France. 22 p
Communication dans un congrès hal-02823287 v1

Analysis of expressed sequence tags in maritime pine (Pinus pinaster Aiton)

Grégoire G. Le Provost , Jean-Marc Frigerio , Philippe Chaumeil , Saneyoshi Ueno , Camille Lepoittevin et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02758480 v1

Candidate gene mapping in pedunculate oak (Quercus robur L.)

Emilie E. Chancerel , Christophe C. Boury , Florian Alberto , Jérôme J. Durand , Antoine Kremer et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02752968 v1

In silico screening of conserved orthologous sequences(COS) from Fagaceae ESTs resources

Yao-Cheng Lin , Saneyoshi Ueno , Jean-Marc Frigerio , Cyril Cabane , Catherine Bodenes-Brezard Bodénès et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755595 v1

Population genomics of phenological clines in sessile oak (Quercus petraea (matt.) Leibl.)

Florian Alberto , Jérémy Derory , Barbara Vornam , Pablo Goicoechea , Stephen Cavers et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755412 v1
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No resistance is sacrosanct: unveiling the genes controlling quantitative resistance to Melampsora larici-populina in interspecific hybrid poplars and quantifying potential adaptation of the pathogen

Arnaud A. Dowkiw , Véronique V. Jorge , Elodie Voisin , Patricia P. Faivre-Rampant , Alois Bresson et al.
4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy
Communication dans un congrès hal-02754692 v1
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Towards broad-spectrum resistance to Melampsora larici-populina rust in poplar: new genetic constructions and potential adaptation of the pathogen

Catherine Bastien , Arnaud A. Dowkiw , Véronique V. Jorge , Elodie Voisin , Vanina Guérin et al.
5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy
Communication dans un congrès hal-02753480 v1

A web portal for oak genetic and genomic data

Jean-Paul Soularue , Frédéric Raspail , Audrey Jacques-Gustave , Christophe Plomion , Thierry Labbé et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753691 v1

Transcriptome analysis of bud dormancy in sessile oak (Quercus petraea (Matt.) Libel.) by 454 pyrosequencing

Saneyoshi Ueno , Grégoire G. Le Provost , Céline Noirot , Christophe Klopp , Antoine Kremer et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753292 v1

Genetic variability in 3D coarse root architecture in Pinus pinaster

Frederic F. Danjon , Emmanuelle Eveno , Christophe Plomion , Pauline Garnier‐géré
2. International Conference Wind Effects on Trees, Oct 2009, Freiburg, Germany
Communication dans un congrès hal-02754108 v1

Joint transcriptomic and proteomic approaches to precise the molecular basis of a major QTL (RUS) controlling quantitative rust resistance in poplar

Véronique V. Jorge , Sébastien Duplessis , Céline C. Lalanne , Alois Bresson , Arnaud A. Dowkiw et al.
Plant genomics and beyond, Jul 2009, Evry, France
Communication dans un congrès hal-02756173 v1

Une contribution de Génoplante aux espèces forestières

Christophe Plomion
Les 10 ans de Génoplante, Apr 2009, Paris, France
Communication dans un congrès hal-02813235 v1
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POPSEC : molecular bases of acclimation to water deficit in poplar

Marie-Béatrice Bogeat-Triboulot , David Cohen , Didier Le Thiec , Sandrine Balzergue , Marie-Laure Martin-Magniette et al.
3. symposium franco-suédois UPRA, Nov 2009, Champenoux, France. 26 p
Communication dans un congrès hal-02817980 v1

Study of molecular control of conifer adaptive response

Christophe Plomion
Ramón Areces Foundation Symposium "New frontiers in forest genomics: sequencing and functional understanding of the conifer genome", Feb 2009, Madrid, Spain
Communication dans un congrès hal-02814958 v1

Strong linkage disequilibrium and balanced selection in Pinus pinaster transcription factors putatively involved in wood formation

Camille Lepoittevin , Pauline Garnier‐géré , François Hubert , Christophe Plomion
IUFRO-CTIA joint conference, “Adaptation, Breeding and Conservation in the Era of Forest Tree Genomics and Environmental Change”, Aug 2008, Québec City, Canada. 1 p
Communication dans un congrès hal-02817240 v1

Coarse root architecture and stability in a 5-years-old Pinus pinaster provenance x progeny test

Frederic F. Danjon , Emmanuelle Eveno , Frédéric Bernier , François Hubert , Julien Brach et al.
COST E38 Meeting "Woody root processes - Revealing the hidden half", May 2008, Lisbonne, Portugal
Communication dans un congrès hal-02753857 v1
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Association mapping for wood quality in Pinus pinaster Aquitaine breeding population

Camille Lepoittevin , Pauline Garnier‐géré , François Hubert , Franck Salin , Emmanuelle Eveno et al.
IUFRO-CTIA joint conference, "Adaptation, Breeding and Conservation in the Era of Forest Tree Genomics and Environmental Change", Aug 2008, Québec City, Canada. 2 p
Communication dans un congrès hal-01032075 v1

Molecular determinism of flooding responses, an adaptative trait discriminating pedunculate and sessile oak species

Cécile Sulmon , Grégoire Le Provost , Christophe Plomion , Catherine Bodenes , Antoine Kremer
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. p. 27
Communication dans un congrès hal-00337731 v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant et al.
International Plant & Animal genomes XV Conferences, Jan 2007, San Diego, United States
Communication dans un congrès hal-00337980 v1

Molecular characterisation of a major QTL for rust resistance in poplar using a proteomic approach

Céline C. Lalanne , Catherine Bastien , Pascal Frey , Arnaud A. Dowkiw , Véronique V. Jorge et al.
IUFRO - Tree Biotechnology, Jun 2007, Ponta Delgada, Azores, Portugal
Communication dans un congrès hal-02754112 v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant et al.
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. 33p
Communication dans un congrès hal-00337729 v1

Molecular determinism of flooding responses, an adaptative trait discriminating pedunculate and sessile oak species

Cécile Sulmon , Grégoire Le Provost , Christophe Plomion , Catherine Bodenes , Antoine Kremer
Conférence Jacques Monod ‘Environmental Genomics', Jun 2007, Roscoff, France
Communication dans un congrès hal-00337982 v1

Advances in forest tree genomics

Christophe Plomion , Tom Richardson , John Mackay
Forest Trees Workshop, Plant and Animal Genome XIII Conference, Jan 2005, San Diego, United States. ⟨10.1111/j.1469-8137.2005.01446.x⟩
Communication dans un congrès hal-02828437 v1
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Effets de la sélection sur la diversité et la différenciation génétique moléculaire : résultats de simulations et application au pin maritime pour les gènes de la lignification

Pauline Garnier‐géré , Frédéric Austerlitz , Frank Bedon , Antoine Kremer , Christophe Plomion
5. Colloque national du BRG, Nov 2004, Lyon, France
Communication dans un congrès hal-02762648 v1

O impacto do Homem na estrutura de uma espécie: Portugal, um paradigma

Maria Margarida Ribeiro , Santiago C. Gonzalez-Martinez , Christian Burban , Christophe Plomion , Giovanni Giuseppe Vendramin
5º Congresso Florestal Nacional : a Floresta e as Gentes, May 2005, Viseu, Portugal
Communication dans un congrès hal-02764376 v1

Advances in forest tree genomics

Christophe Plomion , T. Richardson , J. Mackay
13. Forest trees workshop. Plant and animal genome, Jan 2005, San Diego, United States
Communication dans un congrès hal-02828410 v1

Using transcriptome analysis to identify osmotic stress candidate genes in maritime pine (Pinus pinaster Ait.)

Jean-Marc Frigerio , Christian Dubos , Philippe Chaumeil , Franck F. Salin , V. Garcia et al.
Sustainable Forestry, Wood products and Biotechnology, BIOFOR 02, Nov 2002, Vitoria-Gasteiz, Spain
Communication dans un congrès hal-02764394 v1

Transcriptome analysis of wood formation in maritime pine

Frigerio Cantón , Grégoire G. Le Provost , V. Garcia , A. Barre , Jean-Marc Frigerio et al.
Sustainable Forestry, Wood products and Biotechnology, BIOFOR 02, Nov 2002, Vitoria-Gasteiz, Spain
Communication dans un congrès hal-02762876 v1

Plant genetic resources : in Silico detection of single nucleotide polymorphisms (SNP) within expressed sequence tags (EST)

Loïck Le Dantec , D. Pot , D. Chagné , Christophe Plomion , A. de Daruvar et al.
Eucarpia symposium, Sep 2003, Angers, France
Communication dans un congrès hal-02761885 v1

Report on the forest trees workshop at the plant and animal genome conference

Christophe Plomion , J. Cooke , T. Richardson , J. Mackay , Gerald A. Tuskan
Forest trees workshop. Plant and animal genome conference, 2003, San Diego, United States
Communication dans un congrès hal-02828223 v1
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A high density genetic map of maritime pine based on AFLPs

D. Chagné , Céline Lalanne , Delphine Madur , S. Kumar , J.M. Frigerio et al.
Conférence, Jun 2001, Bordeaux, France
Communication dans un congrès hal-02762348 v1

Mécanismes physiologiques et moléculaires de la qualité des fruits chez le pêcher

Annick Moing , Elisabeth Dirlewanger , C. Etienne , Dominique Rolin , R. Monet et al.
12. Colloque, May 2002, Bordeaux, France
Communication dans un congrès hal-02763755 v1

Genetic determinism of leaf carbon isotope composition for a pedunculate Oak family

Oliver Brendel , Caroline Scotti-Saintagne , Didier Le Thiec , Teresa Barreneche , Christophe Plomion et al.
Dynamics and conservation of genetic diversity in forest ecosystems. International Conference DYGEN, Dec 2002, Strasbourg, France. n.p
Communication dans un congrès hal-02830897 v1

QTLs and genes controlling peach fruit quality

C. Etienne , Elisabeth Dirlewanger , Patrick Cosson , Laurence Svanella-Dumas , R. Monet et al.
5. International peach symposium, Jul 2001, Davis, United States
Communication dans un congrès hal-02762347 v1
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What can nuclear microsatellites tell us about maritime pine genetic resources conservation and provenance certification strategies?

Jeremy Derory , Stéphanie Mariette , Santiago C. González-Martínez , D. Chagné , Delphine Madur et al.
Conférence, Jun 2001, Bordeaux, France. ⟨10.1051/forest:2002058⟩
Communication dans un congrès hal-02763157 v1

Approches moléculaires de la qualité du bois chez le pin maritime

Christophe Plomion , G. Le Provost , Jorge Almiro Paiva , J.M. Gion , Céline Lalanne et al.
12. Colloque, May 2002, Bordeaux, France
Communication dans un congrès hal-02762381 v1

Neutral and adaptive genetic diversity of mediterranean conifers

Michel M. Bariteau , Christophe Plomion , Michel Arbez , Christian Pichot , Giovanni Vendramin et al.
DYGEN Conference, Dec 2002, Strasbourg, France
Communication dans un congrès hal-02763874 v1
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Genetic control of pulp and timber properties in maritime pine (Pinus pinaster Ait.)

D. Pot , Guillaume Chantre , Philippe Rozenberg , J.C. Rodrigues , G.L. Jones et al.
Conférence, Jun 2001, Bordeaux, France
Communication dans un congrès hal-02762250 v1

Déterminisme génétique de l'efficience d'utilisation de l'eau du pin maritime

Oliver Brendel , Christophe Plomion , Annie A. Raffin , Jean-Marc J.-M. Guehl
1. Rencontres, Jan 2001, Autrans, France
Communication dans un congrès hal-02762311 v1

Analysis of Cedrus genetic geographic diversity using AFLPs

M. Bou-Dagher , Stéphanie Mariette , Bruno Fady , Francois Lefèvre , G. Grenier et al.
International Conference, Jun 2001, Bordeaux, France
Communication dans un congrès hal-02760231 v1

Détection de QTL associés à la résistance à la rouille courbeuse chez le Pin maritime

Marie Laure M. L. Desprez Loustau , B. Poupard , Christophe Plomion
5. congrès de la SFP, Mar 2001, Angers, France
Communication dans un congrès hal-02761934 v1

Genetic determinism of 13 C in Maritime Pine

Oliver Brendel , David Pot , Christophe Plomion , Jean-Marc J.-M. Guehl
European Science Foundation Workshop : Adapatation of Plant Populations to Environmental Insult, Jul 2001, Newcastle upon Tyne, United Kingdom. n.p
Communication dans un congrès hal-02825970 v1

Use of chloroplast microsatellites for stand and seed certification in maritime pine

G. Leprovost , Sophie Gerber , Stephane Decroocq , M. Ribeiro , D. Pot et al.
8. Conference, Jan 2000, San Diego, United States
Communication dans un congrès hal-02767270 v1

Comment surmonter les difficultés des espèces forestières pour la recherche de QTL

Daniel Prat , Anne Arcade , Catherine Bodenes , Patricia Faivre Rampant , Jean-Marc Frigerio et al.
Rencontres de m2ribel 1997, 1997, Versailles, France
Communication dans un congrès hal-04666203 v1

Genetic dissection of phenotypic traits in maritime pine using RAPD and protein markers

Christophe Plomion , Nasser Bahrman , Charles Eric Durel , D.M. O'Malley , Antoine Kremer
Joint Meeting of the IUFRO International Union of Forestry Research Organizations, Sep 1995, Gand, Belgium
Communication dans un congrès hal-02765475 v1

Cartographie et architecture génétique de caractères quantitatifs chez le pin maritime

Christophe Plomion , Nasser Bahrman , P. Costa , D.E. Durel , Antoine Kremer
Groupe de travail "Marqueurs moléculaires chez les Végétaux", Mar 1995, Méribel, France
Communication dans un congrès hal-02774362 v1

Identification of proteins involved in drought stress of maritime pine seedlings

P. Costa , Nasser Bahrman , Denis Loustau , A. Queyrens , Christophe Plomion et al.
Inter-Drought 95, Aug 1995, Montpellier, France
Communication dans un congrès hal-02775635 v1

Integrated RADP-protein genomic map of maritime pine (Pinus pinaster Ait)

Christophe Plomion , D.M. O'Malley , Nasser Bahrman , Charles Eric Durel
Pinetree workshop, 3.International conference, Jan 1995, San Diego, United States
Communication dans un congrès hal-02773358 v1

Genetic mapping and analysis of QTL' in eucalyptus

D. Verhaegen , Christophe Plomion , Antoine Kremer
Joint meeting of IUFRO molecular genetics. Working group and somatic cell working group, Sep 1995, Gent, Belgium
Communication dans un congrès hal-02776141 v1
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TEs as a major driver of genomic variation in trees ? Jumping MITEs in common beech revealed by TIPs and eccDNA

Abirami Soundiramourtty , Lauren Clement , Christel Llauro , Olivier Panaud , Christophe Plomion et al.
ICTE 2024 - International Congress on Transposable Elements, Apr 2024, Saint Malo, France.
Poster de conférence hal-04907176 v1

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)

Mamadou Dia Sow , Odile Rogier , Isabelle Lesur , Christian Daviaud , Emile Mardoc et al.
Plant Epigenetics (EPIPLANT/SEB 2024), Jul 2024, Clermont-Ferrand, France. , Abstract book of EPIPLANT/SEB 2024, Session VI Chromatin in transcription, replication and repair (Poster #69), pp.131-132
Poster de conférence hal-05056784 v1
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Genomic selection proof-of-concept in two major conifer species

Laurent Bouffier , J Klápště , Jérôme Bartholomé , Christophe Plomion , E Telfer et al.
11. World Congress on Genetics Applied to Livestock Production, Nov 2018, Auckland, New Zealand
Poster de conférence hal-03341330 v1

Demographic history of Pinus pinaster at the Northern range of its distribution: what can we learn for ABC models?

Camille Lepoittevin , François Hubert , Franck F. Bedon , Valérie V. Léger , Luc Harvengt et al.
2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. , 2018
Poster de conférence hal-02786263 v1
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Clarifying the role of DNA methylation in tree phenotypic plasticity

Mamadou Dia Sow , Anne-Laure Le Gac , Clément Lafon Placette , Alain Delaunay , Isabelle Le Jan et al.
43. FEBS Congress, Biochemistry Forever, Jul 2018, Prague, Czech Republic. FEBS Open Bio, 8 (supplément S1), 2018, Supplément 43rd FEBS Congress, Biochemistry Forever, Prague, Czech Republic, July 7‐12, 2018
Poster de conférence hal-02736952 v1

An RNAseq approach to decipher the molecular mechanisms involved in the biosynthesis of the aromatic compounds in European white oaks wood

Grégoire Le Provost , Erwan Guicoux , Andrea Prida , Axel Marchal , Franck Salin et al.
Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shangai, China
Poster de conférence hal-03351963 v1

Detection of WUE positional candidate genes by combining QTL maps and BAC sequencing with the annotated oak genome sequence

Nicolas Francillonne , Catherine Bodenes-Brezard Bodénès , François Ehrenmann , Célia Michotey , Antoine Kremer et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741266 v1

Genetic analysis of oleoresin terpenoid content in maritime pine

Jérôme Bartholomé , Marina de Vega , Isabelle Lesur Kupin Lesur , Franck F. Salin , Emilie E. Chancerel et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741247 v1
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Genetic architecture of water use efficiency and related traits in maritime pine

Marina de Miguel , Hélène Lagraulet , Justine Laoue , Raphael Segura , Régis R. Burlett et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02742744 v1

High density genetic map in oak reveals segregation distortion in oak and allows comparative mapping between oak and chestnut

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , François Ehrenmann , Meg Staton , Thomas Lane et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741322 v1
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Accuracy of genomic prediction in a multi-generation population of maritime pine

Jérôme Bartholomé , Fikret Isik , Joost van Heerwaarden , Annie A. Raffin , Christophe C. Boury et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741597 v1
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Genetic analysis of oleoresin terpenoid content in maritime pines

Jérôme Bartholomé , Marina de Vega , Isabelle Lesur Kupin Lesur , Franck F. Salin , Emilie E. Chancerel et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 2016, Abstract Book
Poster de conférence hal-02743607 v1

An RNAseq approach to decipher the molecular mechanisms involved in the biosynthesis of the aromatic compounds in European white oaks wood

Grégoire G. Le Provost , Erwan Guichoux , Andrea Prida , Axel Marchal , Franck F. Salin et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02742605 v1
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Forest tree GnpIS: an information system dedicated to forest tree genetics, genomics and phenomics

Célia Michotey , Christel Anger , François Ehrenmann , Odile Rogier , Véronique V. Jorge et al.
35. New Phytologist Symposium, Jun 2015, Boston, United States. 2015
Poster de conférence hal-02795537 v1

From whole-genome scans for divergence to the discovery of speciation genes in oaks

Thibault Leroy , Jean Marc Aury , Catherine Bodenes-Brezard Bodénès , Laure Villate , Grégoire G. Le Provost et al.
15. Congress of the European Society for Evolutionary Biology (ESEB), Aug 2015, Lausanne, Switzerland. , 1 p., 2015
Poster de conférence hal-02797182 v1
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Genomic prediction in a multi-generation breeding population: maritime pine as a case study

Jérôme Bartholomé , Christophe C. Boury , Joost van Heerwaarden , Fikret Isik , Christophe Plomion et al.
IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery, Jun 2015, Florence, Italy. 2015, ⟨10.15454/1.5137759036095466E12⟩
Poster de conférence hal-02798013 v1
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A computational architecture designed for genome annotation: oak genome sequencing project as a use case

Nicolas Francillonne , Tina Alaeitabar , Françoise Alfama-Depauw , Loïc Couderc , Claire Guerche et al.
JOBIM 2015 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2015, Clermont-ferrand, France. 2015
Poster de conférence hal-01246649 v1
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Integration of transcriptomic and proteomics approaches in characterizing short-term gravi-perception signaling networks in poplar wood.

Nicolas N. Richet , Mélanie Mauriat , Marie-Claude Lesage Descauses , Odile Rogier , Françoise F. Laurans et al.
8. Plant Biomechanics International Conference PBM8, Nov 2015, Nagoya, Japan. Nagoya University, Proceedings of the Plant Biomechanics Conference, 253 p., 2015, 8th Plant Biomechanics International Conference
Poster de conférence hal-02744040 v1
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Towards functional genomics of transcription factor genes associated to growth and wood formation in maritime pine

Jean-François Trontin , Concepción Avila , Sandrine Debille , Fernando de La Torre , Jorge El-Azaz et al.
ProCoGen final open conference, Promoting Conifer Genomic Resources, Nov 2015, Orléans, France. , pp.1, 2015
Poster de conférence hal-02798385 v1

Linkage disequilibrium and genomic selection in maritime pine

Fikret Isik , Jérôme Bartholomé , Alfredo Farjat , Emilie E. Chancerel , Annie A. Raffin et al.
IUFRO - Tree Biotechnology, Jun 2015, florence, Italy. 2015
Poster de conférence hal-02798012 v1
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Molecular phenotyping of Maritime pine somatic plants transformed with an RNAi construct targeting cinnamyl alcohol dehydrogenase

Jean-François Trontin , Caroline Teyssier , Concepción Avila , Sandrine Debille , Claire C. Le Mette et al.
3. International Conference of the IUFRO Working Party 2.09.02: Somatic Embryogenesis and Other Vegetative Propagation Technologies, Sep 2014, Vitoria-Gasteiz, Spain. 2014, 3rd International Conference of the IUFRO Working Party 2.09.02: Somatic Embryogenesis and Other Vegetative Propagation Technologies. Book of Abstracts
Poster de conférence hal-02740212 v1
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Paternity recovery in a maritime pine polycross trial

Marjorie Vidal , Maël Ruby , Pierre Alazard , Luc Harvengt , Christophe Plomion et al.
Meeting of IUFRO, Jul 2013, Whistler, Canada. 2013
Poster de conférence hal-02804252 v1
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“PLANT-KBBE SUSTAINPINE” Genomic tools in maritime Pine for enhanced biomass production and sustainable forest management

Andrea Rupps , Kurt Zoglauer , Vornam Barbara , Reiner Finkeldey , María-Teresa Cervera et al.
PLANT 2030 Status Seminar 2013, Mar 2013, Potsdam, Germany. , 2013
Poster de conférence hal-02808492 v1

De novo assembly of Fagus sylvatica transcriptome based on Sanger and 454 ESTs: application in transcriptome-scale analysis of bud phenology and markers development

Isabelle Lesur Kupin Lesur , Grégoire G. Le Provost , Céline C. Lalanne , François Ehrenman , Céline Noirot et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02802761 v1
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Use of a relationship matrix based on markers to evaluate genetic values: a case study in maritime pine

Laurent Bouffier , Maël Ruby , Emilie E. Chancerel , Christophe Plomion
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p., 2012, Book of Abstracts
Poster de conférence hal-02745071 v1

Identifying the genetic bases of natural variation in resistance to powdery mildew in a Quercus robur population

Benoît Barres , Pauline Garnier‐géré , Catherine Bodenes-Brezard Bodénès , Christian Burban , Emilie E. Chancerel et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02808598 v1

BAC libraries for structural genomic development in oak

Patricia P. Faivre-Rampant , Isabelle Lesur Kupin Lesur , Isabelle I. Le Clainche , Aurelie A. Canaguier , Clément Boussardon et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02808373 v1
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Development of highly-multiplexed SNP arrays in Maritime pine for multi-objective genetic applications

Christophe Plomion , Emilie E. Chancerel , Camille Lepoittevin , Isabelle Lesur , S.C. González-Martínez et al.
IUFRO Tree Biotechnology Conference 2011 “From genomes to integration and delivery”, Jun 2011, Bahia, Brazil. 3 p., 2011
Poster de conférence hal-02808550 v1
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A proteomic study of water deficit-responsive proteins in poplar roots

Delphine D. Vincent , Julie Marco , Philippe Chaumeil , Marc Bonneu , Stéphane Claverol et al.
17. Genomes Conference. Plant, Animal and Microbe, Jan 2009, San Diego, United States. n.p., 2009
Poster de conférence hal-02819720 v1
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Can nucleotide diversity patterns in Pinus pinaster lignification transcription factors be explained by demography or selection?

Camille Lepoittevin , François Hubert , Christophe Plomion , Pauline Garnier‐géré
12. Congress of the European Society for Evolutionary Biology, Aug 2009, Turin, Italy. 2 p., 2009
Poster de conférence hal-02813943 v1

Impact of water deficit on the leaf proteome of 2 Populus deltoides x P. nigra grown in glasshouse or in nursery

Ludovic Bonhomme , Valérie Labas , Delphine D. Vincent , Christophe Plomion , Franck F. Brignolas et al.
16. Congress of the Federation of European Societies of Plant Biology (FESPB), Aug 2008, Tampere, Finland. n.p., 2008
Poster de conférence hal-02815651 v1
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Patrons de diversité nucléotidique de gènes candidats à la tolérance au stress hydrique chez 5 espèces d'arbres forestiers

Pauline Garnier‐géré , Isabella Paolucci , Thibaut Decourcelle , Véronique V. Jorge , Emmanuelle Eveno et al.
7. colloque national du BRG "Ressources génétiques" : les ressources génétiques à l'heure des génomes, Oct 2008, Strasbourg, France. 1 p., 2008
Poster de conférence hal-02821517 v1

A transcriptomic approach in maritime pine to reveal the molecular mechanisms involved in wood formation

Philippe Chaumeil , Céline C. Lalanne , Camille Lepoittevin , Grégoire G. Le Provost , Raul Herrera et al.
IUFRO-CTIA 2008 Joint Conference, Aug 2008, Québec, Canada. , 1 p., 2008
Poster de conférence hal-02820813 v1

Molecular bases of acclimation and adaptation to water deficit in poplar

Marie-Béatrice Bogeat-Triboulot , Didier Le Thiec , David Cohen , Erwin Dreyer , Christophe Plomion et al.
Séminaire Génoplante, Apr 2008, Arles, France. , 1 p., 2008
Poster de conférence hal-02822891 v1
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Studying the landscape of nucleotide diversity in candidate genes for wood quality in Pinus pinaster

Camille Lepoittevin , Luis Cancino , Emmanuelle Eveno , Pauline Garnier‐géré , John Mackay et al.
IUFRO Conference "Tree Biotechnology", Jun 2007, Ponta Delgada, Portugal. 2 p., 2007
Poster de conférence hal-02817476 v1

Exploring phenotypic and molecular plasticity to osmotic stress in a Mediterranean pine

Philippe Chaumeil , Christophe C. Boury , Manon M. Moreau , Marie Foulongne , José Carlos Rodrigues et al.
15. International conference of the Plant and Animal Genome, Jan 2007, San Diego, France. , 1 p., 2007
Poster de conférence hal-02824650 v1
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INTERPOPGER: Interactions between natural and artificial poplar stands and selection pressures associated with their management in French landscape. Poster.

Véronique V. Jorge , Arnaud A. Dowkiw , Mary Juteau , Vanina Guérin , Patrick Poursat et al.
Population genetics and genomics of forest trees : from gene function to evolutionary dynamics and conservation; A joint conference of IUFRO working groups 2.04.01 (population, ecological and conservation genetics) and 2.04.10 (genomics), and COST Action E-28 (genosilva : european forest genomics network), Oct 2006, Madrid, Spain. 1 p., 2006, Population genetics and genomics of forest trees: from gene function to evolutionary dynamics and conservation. Programme and conference abstract book
Poster de conférence hal-02755567 v1

Advances in botanical research

Christophe Plomion , Anne-Francoise Adam-Blondon
Elsevier Ltd, 74, 368 p., 2015, Advances in Botanical Research, 9780123985484
Ouvrages hal-01536294 v1

Genetics, genomics and breeding of conifers

Christophe Plomion , Jean Bousquet , Chittaranjan Kole
CRC Press Boca Raton, 447 p., 2011, Genetics, Genomics and Breeding of Crop Plants, 978-1-57808-719-8
Ouvrages hal-02804986 v1

Wood, breeding, biotechnology and industrial expectations

Christophe Plomion , C. Cahalan
EDP Sciences, 59 (5-6), pp.457-712, 2002, Annales des Sciences Forestières
Ouvrages hal-02831010 v1
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Quelles gestions des forêts pour demain ?

Catherine Bastien , Thierry Caquet , Sarah-Louise Filleux , Catherine Foucaud-Scheunemann , Damien Bonal et al.
"Ressources" n°2, la revue INRAE, 2, pp.66-89, 2022, ⟨10.17180/EZMD-8G13⟩
Chapitre d'ouvrage hal-03795900 v1
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Maritime Pine Genomics in Focus

Lieven Sterck , Nuria de María , Rafael A Cañas , Marina de Miguel , Pedro Perdiguero et al.
The Pine Genomes, Springer International Publishing, pp.67-123, 2022, Compendium of Plant Genomes, 978-3-030-93390-6. ⟨10.1007/978-3-030-93390-6_5⟩
Chapitre d'ouvrage hal-03594614 v1

Epigenetics in Forest Trees: State of the Art and Potential Implications for Breeding and Management in a Context of Climate Change

Mamadou Dia Sow , Isabel Allona , Christophe Ambroise , Daniel Conde , Régis R. Fichot et al.
Plant Epigenetics Coming of Age for Breeding Applications, 88, Academic press, Elsevier, 454 p., 2018, Advances in Botanical Research, 9780128154038. ⟨10.1016/bs.abr.2018.09.003⟩
Chapitre d'ouvrage hal-02791217 v1

Wood formation in trees

Mélanie Mauriat , Grégoire Le Provost , Philippe Rozenberg , Sylvain Delzon , Nathalie Bréda et al.
Tree Biotechnology, CRC Press, 656 p., 2014, 9781466597143
Chapitre d'ouvrage hal-01204210 v1

Poplar proteomics: update and future challenges

Christophe Plomion , Delphine D. Vincent , Franck F. Bedon , Johann J. Joets , Ludovic L. Bonhomme et al.
Genetics, Genomics and Breeding of Poplar, CRC Press, 390 p., 2011, Genetics, genomics and breeding of crop plants, 9781578087143
Chapitre d'ouvrage hal-00964339 v1

Protein Extraction from Woody Plants

Christophe Plomion , Céline C. Lalanne
Plant Proteomics: Methods and Protocols, 355, Humana Press, 2007, Methods in Molecular Biology, 978-1-58829-635-1. ⟨10.1385/1-59745-227-0:37⟩
Chapitre d'ouvrage hal-02823006 v1

Fagaceae trees

Antoine Kremer , Manuela Casasoli , Teresa Barreneche , Catherine Bodenes-Brezard , Paul Sisco et al.
Genome mapping and molecular breeding in plants. Forest trees, Springer-Verlag, 2007, Genome Mapping and Molecular Breeding in Plants, 978-3-5403-4540-4. ⟨10.1007/978-3-540-34541-1_5⟩
Chapitre d'ouvrage hal-01189181 v1

Pines

Christophe Plomion , D. Chagné , D. Pot , S. Kumar , P. L. Wilcox et al.
Forest Trees, 7, Springer-Verlag, 2007, Genome Mapping and Molecular Breeding in Plants, 978-3-540-34540-4
Chapitre d'ouvrage hal-02822654 v1

Proteomics for genetic and physiological studies in forest trees : application in Maritime Pine

Christophe Plomion , Nasser N. Bahrman , Paulo Costa , Christian C. Dubos , Jean-Marc Frigerio et al.
Molecular genetics and breeding of forest trees, Haworth press, 2004, 978-1-56022-958-0 978-1-56022-959-9
Chapitre d'ouvrage hal-02827253 v1

Contrôle variétal. L'empreinte génétique d'une variété

P. Pastuska , Annie Raffin , G. Le Provost , Christophe Plomion
Le progrès génétique en forêt, Groupe PMF, 2002
Chapitre d'ouvrage hal-02831004 v1

Proteomics as a tool for plant genetics and breeding

Hervé Thiellement , Christophe Plomion , M. Zivy
Proteomics from protein sequence to function, Vios Scientific Publishers;GBR, 2001
Chapitre d'ouvrage hal-02834101 v1

Molecular markers and genome mapping in woody plants

M.T. Cervera , Christophe Plomion , C. Malpica
Molecular biology of woody plants, 64, Kluwer Academic Publishers, 1999, Forestry Sciences, 0-7923-6012-5
Chapitre d'ouvrage hal-02838346 v1

Synchronous effective population size changes and genetic stability of forest trees through glacial cycles

Pascal Milesi , Chedly Kastally , Benjamin Dauphin , Sandra Cervantes , Francesca Bagnoli et al.
2023
Pré-publication, Document de travail hal-04210059 v1

Plant mutations: slaying beautiful hypotheses by surprising evidence

Sylvain Schmitt , Patrick Heuret , Valérie Troispoux , Mélanie Beraud , Jocelyn Cazal et al.
2023
Pré-publication, Document de travail hal-04338228 v1

Extensive variation of leaf specialized metabolite production in sessile oak ( Quercus petraea ) populations is to a large extent genetically determined but not locally adaptive

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le-Provost , Antoine Kremer , Alexis Ducousso et al.
2023
Pré-publication, Document de travail hal-04144753 v1

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)

Mamadou Dia Sow , Odile Rogier , Isabelle Lesur , Christian Daviaud , Emile Mardoc et al.
2023
Pré-publication, Document de travail hal-04170410 v1

Locally adapted oak populations along an elevation gradient display different molecular strategies to regulate bud phenology.

Gregoire Le Provost , Celine Lalanne , Isabelle Lesur , Jean-Marc Louvet , Sylvain Delzon et al.
2021
Pré-publication, Document de travail hal-03352278 v1
Image document

Water stress-associated isolation barriers between two sympatric oak species

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie et al.
2021
Pré-publication, Document de travail (preprint/prepublication) hal-03351973 v1
Image document

Molecular plasticity to soil water deficit differs between sessile oak (Quercus Petraea (Matt.) Liebl.) high- and low-water use efficiency genotypes

Grégoire Le Provost , Theo Gerardin , Christophe Plomion , Oliver Brendel
2021
Pré-publication, Document de travail (preprint/prepublication) hal-03351971 v1
Image document

Genome-wide evolutionary response of European oaks since the Little Ice Age

Dounia Saleh , Jun Chen , Jean-Charles Leplé , Thibault Leroy , Laura Truffaut et al.
2021
Pré-publication, Document de travail (preprint/prepublication) hal-03275582 v1

Combining climatic and genomic data improves range-wide tree height growth prediction in a forest tree

Juliette Archambeau , Marta Benito-Garzón , Frédéric Barraquand , Marina de Miguel Vega , Christophe Plomion et al.
2021
Pré-publication, Document de travail (preprint/prepublication) hal-03372230 v1
Image document

Adaptive introgression as a driver of local adaptation to climate in European white oaks

Thibault Leroy , Jean-Marc Louvet , Céline Lalanne , Grégoire Le Provost , Karine Labadie et al.
2019
Pré-publication, Document de travail (preprint/prepublication) hal-02788600 v1

INCO-FORADAPT : global, physiological and molecular responses to climatic stresses of three mediterranean conifers. Consequences for optimal use, conservation and sustainable improvement of their genetic resources

A. Altman , Michel Arbez , Michel Bariteau , J.M. Frigerio , G. Grenier et al.
* INRA Equipe Régionale Documentation, Domaine St Paul, Site Agroparc, 84914 Avignon cedex 9 Diffusion du document : INRA Equipe Régionale Documentation, Domaine St Paul, Site Agroparc, 84914 Avignon cedex 9. 1999
Chapitre de rapport hal-02839809 v1