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Christophe PLOMION

23
Documents
Identifiants chercheurs

Présentation

Directeur d'Unité Equipe E4E
Directeur de recherche - HDR Directeur d'Unité Equipe E4E

Publications

franck-salin
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe
Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩
Article dans une revue hal-01579667v1
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Nucleotide diversity in lignification genes and QTNs for lignin quality in a multi-parental population of Eucalyptus urophylla

Eric Mandrou , Marie Denis , Christophe Plomion , Franck F. Salin , Frédéric Mortier
Tree Genetics and Genomes, 2014, 10 (5), pp.1281-1290. ⟨10.1007/s11295-014-0760-y⟩
Article dans une revue hal-02632477v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Emilie E. Chancerel , Jean-Baptiste J.-B. Lamy , Isabelle Lesur Kupin Lesur , Celine C. Noirot , Christophe C. Klopp
BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩
Article dans une revue hal-00964786v1
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In vitro vs in silico detected SNPs for the development of a genotyping array : what can we learn from a non-model species?

Camille Lepoittevin , Jean-Marc Frigerio , Pauline Garnier‐géré , Franck F. Salin , María-Teresa Cervera
PLoS ONE, 2010, 5 (6), 9 p. ⟨10.1371/journal.pone.0011034⟩
Article dans une revue hal-02662512v1
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Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Saneyoshi Ueno , Grégoire Le Provost , Valérie Léger , Christophe C. Klopp , Céline Noirot
BMC Genomics, 2010, 11, pp.650. ⟨10.1186/1471-2164-11-650⟩
Article dans une revue hal-00645933v1
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(Not) Keeping the stem straight: a proteomic analysis of maritime pine seedlings undergoing phototropism and gravitropism

Raul Herrera , Catherine Krier , Céline C. Lalanne , El Hadji Maodo Ba , Alexia Stokes
BMC Plant Biology, 2010, 10, pp.217. ⟨10.1186/1471-2229-10-217⟩
Article dans une revue hal-02664731v1
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A micromethod for high throughput RNA extraction in forest trees

Grégoire G. Le Provost , Raul Herrera , Jorge Almiro Paiva , Philippe Chaumeil , Franck F. Salin
Biological Research, 2007, 40 (3), pp.291-297
Article dans une revue hal-02655724v1

Transcriptome analysis of bud burst in sessile oak (Quercus petraea)

Jérémy Derory , Patrick P. Léger , Virginie V. Garcia , Jacques Schaeffer , Marie-Theres Hauser
New Phytologist, 2006, 170 (4), pp.723-738. ⟨10.1111/j.1469-8137.2006.01721.x⟩
Article dans une revue hal-02666078v1

Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , G. Le Provost , D. Pot , Franck Salin , C. Lalane
Tree Physiology, 2003, 23, pp.169-179
Article dans une revue hal-02670722v1
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Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , Grégoire Le Provost , David Pot , Franck Salin , Céline Lalanne
Tree Physiology, 2003, 23 (3), pp.169-179. ⟨10.1093/treephys/23.3.169⟩
Article dans une revue hal-04200586v1

Oak genome sequencing and evolution

Jerome J. Salse , Jean Marc Aury , Florent Murat , Sébastien Faye , Karine Labadie
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741698v1

Development of genomic resources to study the structure, function and evolution of the oak genome

Christophe Plomion , Joelle J. Amselem , Jean-Marc Aury , Catherine Bodenes , Emilie Chancerel
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-01019850v1

Analysis of expressed sequence tags in maritime pine (Pinus pinaster Aiton)

Grégoire G. Le Provost , Jean-Marc Frigerio , Philippe Chaumeil , Saneyoshi Ueno , Camille Lepoittevin
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02758480v1

Bioinformatic analysis of Sanger and 454 ESTs in oak

Saneyoshi S. Ueno , Grégoire G. Le Provost , Valérie V. Léger , Christophe C. Klopp , Celine C. Noirot
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain. pp.73
Communication dans un congrès hal-00964385v1
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Association mapping for wood quality in Pinus pinaster Aquitaine breeding population

Camille Lepoittevin , Pauline Garnier‐géré , François Hubert , Franck Salin , Emmanuelle Eveno
IUFRO-CTIA joint conference, "Adaptation, Breeding and Conservation in the Era of Forest Tree Genomics and Environmental Change", Aug 2008, Québec City, Canada. 2 p
Communication dans un congrès hal-01032075v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. 33p
Communication dans un congrès hal-00337729v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant
International Plant & Animal genomes XV Conferences, Jan 2007, San Diego, United States
Communication dans un congrès hal-00337980v1

Using transcriptome analysis to identify osmotic stress candidate genes in maritime pine (Pinus pinaster Ait.)

Jean-Marc Frigerio , Christian Dubos , Philippe Chaumeil , Franck F. Salin , V. Garcia
Sustainable Forestry, Wood products and Biotechnology, BIOFOR 02, Nov 2002, Vitoria-Gasteiz, Spain
Communication dans un congrès hal-02764394v1

An RNAseq approach to decipher the molecular mechanisms involved in the biosynthesis of the aromatic compounds in European white oaks wood

Grégoire G. Le Provost , Erwan Guichoux , Andrea Prida , Axel Marchal , Franck F. Salin
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02742605v1
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Genetic analysis of oleoresin terpenoid content in maritime pines

Jérôme Bartholomé , Marina de Vega , Isabelle Lesur Kupin Lesur , Franck F. Salin , Emilie E. Chancerel
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 2016, Abstract Book
Poster de conférence hal-02743607v1

Genetic analysis of oleoresin terpenoid content in maritime pine

Jérôme Bartholomé , Marina de Vega , Isabelle Lesur Kupin Lesur , Franck F. Salin , Emilie E. Chancerel
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741247v1

BAC libraries for structural genomic development in oak

Patricia P. Faivre-Rampant , Isabelle Lesur Kupin Lesur , Isabelle I. Le Clainche , Aurelie A. Canaguier , Clément Boussardon
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02808373v1