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Claude Pasquier
CNRS researcher
79%
Open access
73
Documents
Current affiliations
- 13009
Researcher identifiers
claudepasquier- Arxiv : pasquier_c_1
- ResearcherId : C-6163-2008
-
0000-0001-7498-395X
- Google Scholar : https://scholar.google.fr/citations?user=YxoGQlYAAAAJ
- IdRef : 057733023
- ResearcherId : http://www.researcherid.com/rid/C-6163-2008
Web site
- https://www.i3s.unice.fr/~cpasquie
Presentation
Claude Pasquier is researcher at French National Center for Scientific Research (CNRS).
He received a Ph.D. degree in Computer Science from the University of Nice - Sophia Antipolis (now Université Côte d’Azur), France, in 1994. During his thesis, he explored the use of software engineering paradigms in the field of structured document manipulation. He defined both a frame-based language for representing document models, and a system of context-aware document generation and configuration (cf. Prototype-based programming.
Subsequently, he was a postdoctoral researcher at the Biophysics and Bioinformatics Laboratory of the University of Athens, Greece, where he conducted research on protein structure prediction.
He held positions at the National Institute for Research in Digital Science and Technology (INRIA) and with Schlumberger, Smart Cards & Terminals division (now Gemalto) where he worked on generative programming.
Since 2002 when he joined CNRS, he successively worked at Villefranche Oceanographic Laboratory (LOV), the Institute of Biology Valrose (iBV) and New Caledonia Institute of Exact and Applied Sciences (ISEA) where he addressed topics as diverse as semantic data integration, omics data mining and attributed graph mining.
Currently at I3S laboratory, he is conducting research focused on complex network mining that combines computer science and systems biology.
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A machine learning approach to predict weaning outcome among ventilated patients in Intensive Care unitReanimation 2023, the French Intensive Care Society International Congress, Jun 2023, Paris, France. ⟨10.1186/s13613-023-01131-y⟩
Conference papers
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Extending a Fuzzy Polarity Propagation Method for Multi-Domain Sentiment Analysis with Word Embedding and POS TaggingECAI 2020 - 24th European Conference on Artificial Intelligence, Aug 2020, Santiago de Compostela, Spain. pp.2140-2147, ⟨10.3233/FAIA200338⟩
Conference papers
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Population-based meta-heuristic for active modules identification10th International Conference on Computational Systems-Biology and Bioinformatics (CSBio 2019), Dec 2019, Nice, France. pp.1-8, ⟨10.1145/3365953.3365957⟩
Conference papers
hal-02366236v1
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The Pervasiveness of Machine Learning in Omics ScienceECML/PKDD 2014 - International Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases Tutorial T3, Sep 2014, Nancy, France
Conference papers
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Extraction de motifs dans des graphes orientés attribués en présence d’automorphisme14e Conférence Francophone sur l'Extraction et la Gestion des Connaissances (EGC'14), Jan 2014, Rennes, France
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Les modèles des experts au service de l'extraction de motifs pertinentsReconnaissance de Formes et Intelligence Artificielle (RFIA) 2014, Jun 2014, ROUEN, France
Conference papers
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Improving pattern discovery relevancy by deriving constraints from expert modelsEuropean Conference on Artificial Intelligence (ECAI'2014), Aug 2014, Prague, Czech Republic. pp.327 - 332, ⟨10.3233/978-1-61499-419-0-327⟩
Conference papers
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Extraction de motifs condensés dans un unique graphe orienté acyclique attribué13e Conférence Francophone sur l'Extraction et la Gestion des Connaissances (EGC'13), Jan 2013, Toulouse, France
Conference papers
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Weighted Path as a Condensed Pattern in a Single Attributed DAG23rd International Joint Conference on Artificial Intelligence (IJCAI'13), Aug 2013, Beijing, China. pp.1642-8
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Extraction de motifs fréquents dans des arbres attribués13e Conférence Francophone sur l'Extraction et la Gestion des Connaissances (EGC'13), Jan 2013, Toulouse, France. pp.193-204
Conference papers
hal-01151512v1
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Frequent Pattern Mining in Attributed trees17th Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD'13), Apr 2013, Gold Coast, Australia. pp.26-37, ⟨10.1007/978-3-642-37453-1_3⟩
Conference papers
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Single Document Keyphrase Extraction Using Sentence Clustering and Latent Dirichlet Allocation5th International Workshop on Semantic Evaluation (SemEval '10), Jul 2010, Uppsala, Sweden. pp.154-157
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Mining association rule bases from integrated genomic data and annotationsSth International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics (CIBB'09), Oct 2008, Vietri sul Mare, Salerno, Italy. pp.78-90, ⟨10.1007/978-3-642-02504-4_7⟩
Conference papers
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GenMiner: mining informative association rules from genomic dataIEEE International Conference on Bioinformatics and Biomedicine (BIBM'07), Nov 2007, Fremont, United States. ⟨10.1109/BIBM.2007.49⟩
Conference papers
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Interpreting microarray experiments via co-expressed gene groups analysisDS'2006 international conference on Discovery Science, Oct 2006, Barcelona, France. pp.316-320, ⟨10.1007/11893318_34⟩
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Analyse des groupes de gènes co-exprimés (AGGC) : un outil automatique pour l’interpretation des expériences de biopuces13ème Rencontres de la Société Francophone de Classification (SFC’06), Sep 2006, Metz, France
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Exploratory analysis of cancer SAGE data9th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'05), Discovery Challenge, Oct 2005, Porto, Portugal
Conference papers
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Analysis of microarray data with THEAIntegrative Post-Genomics (IPG'06), Oct 2004, Lyon, France
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Distributed BLAST with ProActive1st Grid PlugTest, ETSI; ProActive User Group, Oct 2004, Sophia Antipolis, France
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SmartTools: A Development Environment Generator based on XML TechnologiesICSE Workshop on XML Technologies and Software Engineering, May 2001, Toronto, Canada
Conference papers
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DAM-BIO: Bioinformatics internet workbench for protein analysis. New modules and applications to biological problems23rd conference of the Hellenic Society for Biological Sciences, May 2001, Chios, Greece
Conference papers
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PRED-CLASS: Bioinformatics software for generalized protein classification and genome-wide applications23rd conference of the Hellenic Society for Biological Sciences, May 2001, Chios Island, Greece
Conference papers
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A workbench for computational analysis of protein sequence and structure on the Internet22nd Conference of the Hellenic Society for Biological Sciences, May 2000, Skiathos, Greece
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A distributed editing environment for XML documents1st ECOOP Workshop on XML and Object Technology, Jun 2000, Sophia Antipolis, France
Conference papers
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OrienTM: A novel method to predict transmembrane protein topology21st conference of the Hellenic Society for Biological Sciences, May 1999, Syros, Greece
Conference papers
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PRED-TMR2: An hierarchical neural network to classify proteins as transmembrane and a novel method to predict transmembrane segments21st conference of the Hellenic Society for Biological Sciences, May 1999, Syros, Greece
Conference papers
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A web interface for FT: a tool dedicated to the study of periodicities in sequences20th conference of the Hellenic Society for Biological Science, May 1998, Samos, Greece
Conference papers
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CoPreTHi: a program to combine the results of transmembrane protein segment prediction methods20th conference of the Hellenic Society for Biological Sciences, May 1998, Samos, Greece
Conference papers
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BIBLE: a system for Design and Management of Context-Controlled DocumentsFirst International Conference on Principles of Document Processing, 1992, Washington DC, United States
Conference papers
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Projet d'utilisation de la norme ODA à la Caisse des Dépôts et Consignations. Échange et génération de documentscolloque Gestion des Documents Electroniques, Dec 1991, Caen, France
Conference papers
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Applying Semantic Web technologies to biological data integration and visualizationData Management in Semantic Web, pp.131-51, 2012, 978-1-61122-862-5
Book sections
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Identification of active modules in interaction networks using node2vec network embedding2021
Preprints, Working Papers, ...
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Computational search of hybrid human/ SARS-CoV-2 dsRNA reveals unique viral sequences that diverge from other coronavirus strains2020
Preprints, Working Papers, ...
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Gestion et conception de documents structurés par le contexteGénie logiciel [cs.SE]. Universiré de Nice - Sophia Antipolis, 1994. Français. ⟨NNT : 1994NICE4756⟩
Theses
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Contributions à la fouille de données complexesBio-informatique [q-bio.QM]. Université Côte d'Azur, CNRS, I3S, France; École doctorale STIC, 2018
Habilitation à diriger des recherches
tel-02403790v1
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